Regulator of chromosome condensation (RCC1) repeat
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G55580 |
| fragaria_vesca | FvH4_7g23150 FvH4_7g23150 FvH4_7g23150 FvH4_7g23150 FvH4_7g23150 FvH4_7g23150 |
| malus_domestica | MD01G1139700.v1.1 MD07G1204100.v1.1 |
| prunus_persica | Prupe.2G240300_v2.0.a1 Prupe.2G240300_v2.0.a1 Prupe.2G240300_v2.0.a1 Prupe.2G240300_v2.0.a1 Prupe.2G240300_v2.0.a1 Prupe.2G240300_v2.0.a1 Prupe.2G240300_v2.0.a1 |
| pyrus_communis | pycom07g19070 |
| rosa_chinensis | RchiOBHm_Chr1g0368491 |
| rosa_laevigata | RLG00000027209 |
| rosa_multiflora | Rmu_sc0002709.1_g000001 Rmu_sc0006908.1_g000018 |
| rosa_roxburghii | Rroxscaffold_4G00288500 |
| rosa_rugosa | Rorug01G0342000 Rorug01G0342100 Rorug01G0342200 |
| rosa_samantha | Rh1AG349300 Rh1BG312600 Rh1CG327500 Rh1DG344100 |
| rosa_wichuraiana | Rw0G002450 Rw1G031110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AbsI | CCTCGAGG | 2 cut(s) | 552, 873 |
| Acc36I | ACCTGC | 1 cut(s) | 323 |
| AccB1I | GGYRCC | 2 cut(s) | 140, 708 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 718 |
| AccIII | TCCGGA | 2 cut(s) | 283, 1077 |
| AciI | CCGC | 9 cut(s) | 95, 130, 174, 180, 330, 528, 608, 1152, 1357 |
| AclI | AACGTT | 1 cut(s) | 444 |
| AclWI | GGATC | 3 cut(s) | 542, 565, 941 |
| AcsI | RAATTY | 1 cut(s) | 16 |
| AcyI | GRCGYC | 3 cut(s) | 134, 141, 709 |
| AfaI | GTAC | 7 cut(s) | 149, 574, 822, 984, 1030, 1276, 1325 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 129, 336, 528, 718, 1084 |
| AflIII | ACRYGT | 1 cut(s) | 150 |
| AgsI | TTSAA | 5 cut(s) | 231, 449, 464, 484, 670 |
| AjiI | CACGTC | 1 cut(s) | 1268 |
| AjnI | CCWGG | 3 cut(s) | 82, 673, 913 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 295, 327, 759, 791 |
| Alw21I | GWGCWC | 2 cut(s) | 91, 1267 |
| Alw26I | GTCTC | 1 cut(s) | 1190 |
| AlwI | GGATC | 3 cut(s) | 542, 565, 941 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 698, 974 |
| Ama87I | CYCGRG | 2 cut(s) | 552, 873 |
| Aor13HI | TCCGGA | 2 cut(s) | 283, 1077 |
| ApeKI | GCWGC | 5 cut(s) | 326, 698, 772, 863, 1094 |
| ApoI | RAATTY | 1 cut(s) | 16 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 888, 920 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 17 |
| AspLEI | GCGC | 3 cut(s) | 143, 196, 711 |
| AsuC2I | CCSGG | 3 cut(s) | 138, 790, 1049 |
| AsuHPI | GGTGA | 5 cut(s) | 557, 641, 776, 1145, 1355 |
| AsuII | TTCGAA | 1 cut(s) | 21 |
| AvaI | CYCGRG | 2 cut(s) | 552, 873 |
| BanI | GGYRCC | 2 cut(s) | 140, 708 |
| BanII | GRGCYC | 4 cut(s) | 91, 343, 788, 837 |
| BbsI | GAAGAC | 1 cut(s) | 896 |
| Bbv12I | GWGCWC | 2 cut(s) | 91, 1267 |
| BbvI | GCAGC | 5 cut(s) | 313, 685, 784, 875, 1081 |
| BccI | CCATC | 6 cut(s) | 131, 381, 744, 1124, 1308, 1379 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 109, 143 |
| BciT130I | CCWGG | 3 cut(s) | 84, 675, 915 |
| BciVI | GTATCC | 2 cut(s) | 786, 1085 |
| BclI | TGATCA | 1 cut(s) | 1186 |
| BcnI | CCSGG | 3 cut(s) | 138, 790, 1049 |
| BcoDI | GTCTC | 1 cut(s) | 1190 |
| BfaI | CTAG | 1 cut(s) | 242 |
| BfmI | CTRYAG | 4 cut(s) | 315, 690, 861, 1095 |
| BfoI | RGCGCY | 3 cut(s) | 144, 197, 712 |
| BfuAI | ACCTGC | 1 cut(s) | 323 |
| BfuI | GTATCC | 2 cut(s) | 786, 1085 |
| BglII | AGATCT | 1 cut(s) | 857 |
| BisI | GCNGC | 8 cut(s) | 181, 327, 330, 609, 699, 773, 864, 1095 |
| BlsI | GCNGC | 8 cut(s) | 182, 328, 331, 610, 700, 774, 865, 1096 |
| BmcAI | AGTACT | 1 cut(s) | 984 |
| Bme1390I | CCNGG | 6 cut(s) | 84, 138, 675, 790, 915, 1049 |
| BmeT110I | CYCGRG | 2 cut(s) | 552, 873 |
| BmgBI | CACGTC | 1 cut(s) | 1268 |
| BmiI | GGNNCC | 5 cut(s) | 142, 288, 710, 787, 880 |
| BmrFI | CCNGG | 6 cut(s) | 84, 138, 675, 790, 915, 1049 |
| BmrI | ACTGGG | 1 cut(s) | 1079 |
| BmsI | GCATC | 4 cut(s) | 298, 445, 961, 1207 |
| BmuI | ACTGGG | 1 cut(s) | 1079 |
| BpiI | GAAGAC | 1 cut(s) | 896 |
| BpmI | CTGGAG | 5 cut(s) | 105, 582, 723, 996, 1200 |
| Bpu14I | TTCGAA | 1 cut(s) | 21 |
| BpuEI | CTTGAG | 2 cut(s) | 492, 1356 |
| BpuMI | CCSGG | 3 cut(s) | 138, 790, 1049 |
| BsaAI | YACGTR | 2 cut(s) | 153, 797 |
| BsaHI | GRCGYC | 3 cut(s) | 134, 141, 709 |
| BsaJI | CCNNGG | 3 cut(s) | 189, 673, 882 |
| BsaWI | WCCGGW | 2 cut(s) | 283, 1077 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 129, 336, 528, 718, 1084 |
| Bse1I | ACTGG | 3 cut(s) | 529, 1074, 1183 |
| Bse3DI | GCAATG | 1 cut(s) | 647 |
| BseAI | TCCGGA | 2 cut(s) | 283, 1077 |
| BseBI | CCWGG | 3 cut(s) | 84, 675, 915 |
| BseDI | CCNNGG | 3 cut(s) | 189, 673, 882 |
| BseGI | GGATG | 8 cut(s) | 166, 392, 460, 755, 814, 1222, 1319, 1394 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 129, 336, 528, 718, 1084 |
| BseMI | GCAATG | 1 cut(s) | 647 |
| BseMII | CTCAG | 3 cut(s) | 192, 657, 1185 |
| BseNI | ACTGG | 3 cut(s) | 529, 1074, 1183 |
| BseRI | GAGGAG | 3 cut(s) | 59, 384, 801 |
| BseXI | GCAGC | 5 cut(s) | 313, 685, 784, 875, 1081 |
| BseYI | CCCAGC | 2 cut(s) | 1171, 1308 |
| BsgI | GTGCAG | 1 cut(s) | 978 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1357 |
| BshNI | GGYRCC | 2 cut(s) | 140, 708 |
| BsiEI | CGRYCG | 1 cut(s) | 1357 |
| BsiHKAI | GWGCWC | 2 cut(s) | 91, 1267 |
| BsiHKCI | CYCGRG | 2 cut(s) | 552, 873 |
| BsiSI | CCGG | 6 cut(s) | 138, 284, 790, 1049, 1078, 1367 |
| BslFI | GGGAC | 1 cut(s) | 909 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 129, 336, 528, 718, 1084 |
| BsmAI | GTCTC | 1 cut(s) | 1190 |
| BsmFI | GGGAC | 1 cut(s) | 909 |
| BsoBI | CYCGRG | 2 cut(s) | 552, 873 |
| Bsp119I | TTCGAA | 1 cut(s) | 21 |
| Bsp1286I | GDGCHC | 5 cut(s) | 91, 343, 788, 837, 1267 |
| Bsp13I | TCCGGA | 2 cut(s) | 283, 1077 |
| Bsp143I | GATC | 7 cut(s) | 238, 547, 557, 857, 933, 1186, 1350 |
| Bsp19I | CCATGG | 2 cut(s) | 189, 882 |
| BspACI | CCGC | 9 cut(s) | 95, 130, 174, 180, 330, 528, 608, 1152, 1357 |
| BspCNI | CTCAG | 3 cut(s) | 193, 656, 1186 |
| BspEI | TCCGGA | 2 cut(s) | 283, 1077 |
| BspLI | GGNNCC | 5 cut(s) | 142, 288, 710, 787, 880 |
| BspMAI | CTGCAG | 2 cut(s) | 865, 1099 |
| BspMI | ACCTGC | 1 cut(s) | 323 |
| BspPI | GGATC | 3 cut(s) | 542, 565, 941 |
| BspT104I | TTCGAA | 1 cut(s) | 21 |
| BspT107I | GGYRCC | 2 cut(s) | 140, 708 |
| BsrDI | GCAATG | 1 cut(s) | 647 |
| BsrI | ACTGG | 3 cut(s) | 529, 1074, 1183 |
| BssECI | CCNNGG | 3 cut(s) | 189, 673, 882 |
| BssMI | GATC | 7 cut(s) | 238, 547, 557, 857, 933, 1186, 1350 |
| BssNI | GRCGYC | 3 cut(s) | 134, 141, 709 |
| BssT1I | CCWWGG | 2 cut(s) | 189, 882 |
| Bst2UI | CCWGG | 3 cut(s) | 84, 675, 915 |
| Bst4CI | ACNGT | 5 cut(s) | 694, 1014, 1104, 1114, 1328 |
| Bst6I | CTCTTC | 3 cut(s) | 36, 303, 844 |
| BstACI | GRCGYC | 3 cut(s) | 134, 141, 709 |
| BstBAI | YACGTR | 2 cut(s) | 153, 797 |
| BstBI | TTCGAA | 1 cut(s) | 21 |
| BstC8I | GCNNGC | 1 cut(s) | 606 |
| BstDEI | CTNAG | 3 cut(s) | 201, 643, 1194 |
| BstDSI | CCRYGG | 2 cut(s) | 189, 882 |
| BstF5I | GGATG | 8 cut(s) | 166, 392, 460, 755, 814, 1222, 1319, 1394 |
| BstH2I | RGCGCY | 3 cut(s) | 144, 197, 712 |
| BstHHI | GCGC | 3 cut(s) | 143, 196, 711 |
| BstKTI | GATC | 7 cut(s) | 241, 550, 560, 860, 936, 1189, 1353 |
| BstMAI | GTCTC | 1 cut(s) | 1190 |
| BstMBI | GATC | 7 cut(s) | 238, 547, 557, 857, 933, 1186, 1350 |
| BstMCI | CGRYCG | 1 cut(s) | 1357 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 103, 180, 338, 510, 605, 695, 1190 |
| BstNI | CCWGG | 3 cut(s) | 84, 675, 915 |
| BstNSI | RCATGY | 2 cut(s) | 942, 1413 |
| BstSCI | CCNGG | 6 cut(s) | 82, 136, 673, 788, 913, 1047 |
| BstSFI | CTRYAG | 4 cut(s) | 315, 690, 861, 1095 |
| BstSNI | TACGTA | 1 cut(s) | 797 |
| BstV1I | GCAGC | 5 cut(s) | 313, 685, 784, 875, 1081 |
| BstV2I | GAAGAC | 1 cut(s) | 896 |
| BstX2I | RGATCY | 2 cut(s) | 557, 857 |
| BstYI | RGATCY | 2 cut(s) | 557, 857 |
| BsuI | GTATCC | 2 cut(s) | 786, 1085 |
| BtgI | CCRYGG | 2 cut(s) | 189, 882 |
| BtrI | CACGTC | 1 cut(s) | 1268 |
| BtsCI | GGATG | 8 cut(s) | 166, 392, 460, 755, 814, 1222, 1319, 1394 |
| BtsI | GCAGTG | 1 cut(s) | 866 |
| BtsIMutI | CAGTG | 4 cut(s) | 522, 866, 1019, 1110 |
| BveI | ACCTGC | 1 cut(s) | 323 |
| Cac8I | GCNNGC | 1 cut(s) | 606 |
| CaiI | CAGNNNCTG | 2 cut(s) | 698, 974 |
| CfoI | GCGC | 3 cut(s) | 143, 196, 711 |
| CseI | GACGC | 1 cut(s) | 142 |
| Csp6I | GTAC | 7 cut(s) | 148, 573, 821, 983, 1029, 1275, 1324 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1386, 1421 |
| CviAII | CATG | 9 cut(s) | 67, 190, 222, 272, 381, 654, 883, 939, 1410 |
| CviQI | GTAC | 7 cut(s) | 148, 573, 821, 983, 1029, 1275, 1324 |
| DdeI | CTNAG | 3 cut(s) | 201, 643, 1194 |
| DinI | GGCGCC | 2 cut(s) | 142, 710 |
| DpnI | GATC | 7 cut(s) | 240, 549, 559, 859, 935, 1188, 1352 |
| DpnII | GATC | 7 cut(s) | 238, 547, 557, 857, 933, 1186, 1350 |
| Eam1104I | CTCTTC | 3 cut(s) | 36, 303, 844 |
| EarI | CTCTTC | 3 cut(s) | 36, 303, 844 |
| Ecl136II | GAGCTC | 1 cut(s) | 89 |
| Eco105I | TACGTA | 1 cut(s) | 797 |
| Eco130I | CCWWGG | 2 cut(s) | 189, 882 |
| Eco24I | GRGCYC | 4 cut(s) | 91, 343, 788, 837 |
| Eco53kI | GAGCTC | 1 cut(s) | 89 |
| Eco88I | CYCGRG | 2 cut(s) | 552, 873 |
| EcoICRI | GAGCTC | 1 cut(s) | 89 |
| EcoRII | CCWGG | 3 cut(s) | 82, 673, 913 |
| EcoT14I | CCWWGG | 2 cut(s) | 189, 882 |
| EcoT22I | ATGCAT | 1 cut(s) | 1147 |
| EcoT38I | GRGCYC | 4 cut(s) | 91, 343, 788, 837 |
| EgeI | GGCGCC | 2 cut(s) | 142, 710 |
| EheI | GGCGCC | 2 cut(s) | 142, 710 |
| ErhI | CCWWGG | 2 cut(s) | 189, 882 |
| FaeI | CATG | 9 cut(s) | 70, 193, 225, 275, 384, 657, 886, 942, 1413 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 577, 609, 759, 791, 1036, 1068 |
| FaqI | GGGAC | 1 cut(s) | 909 |
| FatI | CATG | 9 cut(s) | 66, 189, 221, 271, 380, 653, 882, 938, 1409 |
| FauI | CCCGC | 2 cut(s) | 521, 1145 |
| FbaI | TGATCA | 1 cut(s) | 1186 |
| Fnu4HI | GCNGC | 8 cut(s) | 181, 327, 330, 609, 699, 773, 864, 1095 |
| FokI | GGATG | 8 cut(s) | 173, 399, 467, 762, 801, 1229, 1326, 1401 |
| FriOI | GRGCYC | 4 cut(s) | 91, 343, 788, 837 |
| Fsp4HI | GCNGC | 8 cut(s) | 181, 327, 330, 609, 699, 773, 864, 1095 |
| FspBI | CTAG | 1 cut(s) | 242 |
| GlaI | GCGC | 3 cut(s) | 142, 195, 710 |
| GluI | GCNGC | 8 cut(s) | 181, 327, 330, 609, 699, 773, 864, 1095 |
| GsaI | CCCAGC | 2 cut(s) | 1175, 1312 |
| GsuI | CTGGAG | 5 cut(s) | 105, 582, 723, 996, 1200 |
| HaeII | RGCGCY | 3 cut(s) | 144, 197, 712 |
| HapII | CCGG | 6 cut(s) | 138, 284, 790, 1049, 1078, 1367 |
| HgaI | GACGC | 1 cut(s) | 142 |
| HhaI | GCGC | 3 cut(s) | 143, 196, 711 |
| Hin1I | GRCGYC | 3 cut(s) | 134, 141, 709 |
| Hin1II | CATG | 9 cut(s) | 70, 193, 225, 275, 384, 657, 886, 942, 1413 |
| Hin6I | GCGC | 3 cut(s) | 141, 194, 709 |
| HinP1I | GCGC | 3 cut(s) | 141, 194, 709 |
| HinfI | GANTC | 3 cut(s) | 203, 897, 1156 |
| HpaII | CCGG | 6 cut(s) | 138, 284, 790, 1049, 1078, 1367 |
| HphI | GGTGA | 5 cut(s) | 557, 641, 776, 1145, 1355 |
| Hpy166II | GTNNAC | 2 cut(s) | 150, 376 |
| Hpy188I | TCNGA | 3 cut(s) | 202, 730, 892 |
| Hpy188III | TCNNGA | 6 cut(s) | 207, 284, 408, 561, 1078, 1229 |
| Hpy8I | GTNNAC | 2 cut(s) | 150, 376 |
| Hpy99I | CGWCG | 1 cut(s) | 585 |
| HpyAV | CCTTC | 2 cut(s) | 49, 761 |
| HpyCH4III | ACNGT | 5 cut(s) | 694, 1014, 1104, 1114, 1328 |
| HpyCH4IV | ACGT | 4 cut(s) | 152, 444, 796, 1267 |
| HpyCH4V | TGCA | 9 cut(s) | 353, 458, 828, 863, 959, 1097, 1119, 1145, 1244 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 103, 180, 338, 510, 605, 695, 1190 |
| HpyF3I | CTNAG | 3 cut(s) | 201, 643, 1194 |
| HpySE526I | ACGT | 4 cut(s) | 152, 444, 796, 1267 |
| Hsp92I | GRCGYC | 3 cut(s) | 134, 141, 709 |
| Hsp92II | CATG | 9 cut(s) | 70, 193, 225, 275, 384, 657, 886, 942, 1413 |
| HspAI | GCGC | 3 cut(s) | 141, 194, 709 |
| KasI | GGCGCC | 2 cut(s) | 140, 708 |
| Kpn2I | TCCGGA | 2 cut(s) | 283, 1077 |
| Ksp22I | TGATCA | 1 cut(s) | 1186 |
| Kzo9I | GATC | 7 cut(s) | 238, 547, 557, 857, 933, 1186, 1350 |
| LmnI | GCTCC | 7 cut(s) | 86, 286, 791, 977, 1181, 1225, 1262 |
| Lsp1109I | GCAGC | 5 cut(s) | 313, 685, 784, 875, 1081 |
| LweI | GCATC | 4 cut(s) | 298, 445, 961, 1207 |
| MaeI | CTAG | 1 cut(s) | 242 |
| MaeII | ACGT | 4 cut(s) | 152, 444, 796, 1267 |
| MaeIII | GTNAC | 4 cut(s) | 256, 355, 661, 1375 |
| MalI | GATC | 7 cut(s) | 240, 549, 559, 859, 935, 1188, 1352 |
| MboI | GATC | 7 cut(s) | 238, 547, 557, 857, 933, 1186, 1350 |
| MfeI | CAATTG | 2 cut(s) | 459, 1380 |
| MflI | RGATCY | 2 cut(s) | 557, 857 |
| MhlI | GDGCHC | 5 cut(s) | 91, 343, 788, 837, 1267 |
| MluCI | AATT | 5 cut(s) | 16, 459, 919, 1040, 1380 |
| Mly113I | GGCGCC | 2 cut(s) | 141, 709 |
| MlyI | GAGTC | 2 cut(s) | 212, 891 |
| MmeI | TCCRAC | 1 cut(s) | 326 |
| Mph1103I | ATGCAT | 1 cut(s) | 1147 |
| MroI | TCCGGA | 2 cut(s) | 283, 1077 |
| MroXI | GAANNNNTTC | 1 cut(s) | 17 |
| MseI | TTAA | 1 cut(s) | 1043 |
| MslI | CAYNNNNRTG | 2 cut(s) | 385, 652 |
| MspA1I | CMGCKG | 2 cut(s) | 1127, 1171 |
| MspI | CCGG | 6 cut(s) | 138, 284, 790, 1049, 1078, 1367 |
| MspR9I | CCNGG | 6 cut(s) | 84, 138, 675, 790, 915, 1049 |
| MunI | CAATTG | 2 cut(s) | 459, 1380 |
| MvaI | CCWGG | 3 cut(s) | 84, 675, 915 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 103, 180, 338, 510, 605, 695, 1190 |
| NarI | GGCGCC | 2 cut(s) | 141, 709 |
| NciI | CCSGG | 3 cut(s) | 138, 790, 1049 |
| NcoI | CCATGG | 2 cut(s) | 189, 882 |
| NdeII | GATC | 7 cut(s) | 238, 547, 557, 857, 933, 1186, 1350 |
| NlaIII | CATG | 9 cut(s) | 70, 193, 225, 275, 384, 657, 886, 942, 1413 |
| NlaIV | GGNNCC | 5 cut(s) | 142, 288, 710, 787, 880 |
| NmeAIII | GCCGAG | 1 cut(s) | 169 |
| NmuCI | GTSAC | 4 cut(s) | 256, 355, 661, 1375 |
| NsiI | ATGCAT | 1 cut(s) | 1147 |
| NspI | RCATGY | 2 cut(s) | 942, 1413 |
| NspV | TTCGAA | 1 cut(s) | 21 |
| PaeR7I | CTCGAG | 2 cut(s) | 552, 873 |
| PdmI | GAANNNNTTC | 1 cut(s) | 17 |
| PfeI | GAWTC | 1 cut(s) | 1156 |
| PflFI | GACNNNGTC | 1 cut(s) | 900 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 718 |
| PfoI | TCCNGGA | 2 cut(s) | 82, 788 |
| PkrI | GCNGC | 8 cut(s) | 182, 328, 331, 610, 700, 774, 865, 1096 |
| PleI | GAGTC | 2 cut(s) | 211, 891 |
| PluTI | GGCGCC | 2 cut(s) | 144, 712 |
| PpsI | GAGTC | 2 cut(s) | 211, 891 |
| Ppu21I | YACGTR | 2 cut(s) | 153, 797 |
| Psp124BI | GAGCTC | 1 cut(s) | 91 |
| Psp1406I | AACGTT | 1 cut(s) | 444 |
| Psp6I | CCWGG | 3 cut(s) | 82, 673, 913 |
| PspFI | CCCAGC | 2 cut(s) | 1171, 1308 |
| PspGI | CCWGG | 3 cut(s) | 82, 673, 913 |
| PspN4I | GGNNCC | 5 cut(s) | 142, 288, 710, 787, 880 |
| PspXI | VCTCGAGB | 2 cut(s) | 552, 873 |
| PstI | CTGCAG | 2 cut(s) | 865, 1099 |
| PstNI | CAGNNNCTG | 2 cut(s) | 698, 974 |
| PsuI | RGATCY | 2 cut(s) | 557, 857 |
| PsyI | GACNNNGTC | 1 cut(s) | 900 |
| PvuII | CAGCTG | 2 cut(s) | 1127, 1171 |
| RsaI | GTAC | 7 cut(s) | 149, 574, 822, 984, 1030, 1276, 1325 |
| RsaNI | GTAC | 7 cut(s) | 148, 573, 821, 983, 1029, 1275, 1324 |
| RseI | CAYNNNNRTG | 2 cut(s) | 385, 652 |
| SacI | GAGCTC | 1 cut(s) | 91 |
| SaqAI | TTAA | 1 cut(s) | 1043 |
| SatI | GCNGC | 8 cut(s) | 181, 327, 330, 609, 699, 773, 864, 1095 |
| Sau3AI | GATC | 7 cut(s) | 238, 547, 557, 857, 933, 1186, 1350 |
| ScaI | AGTACT | 1 cut(s) | 984 |
| SchI | GAGTC | 2 cut(s) | 212, 891 |
| ScrFI | CCNGG | 6 cut(s) | 84, 138, 675, 790, 915, 1049 |
| SduI | GDGCHC | 5 cut(s) | 91, 343, 788, 837, 1267 |
| SfaNI | GCATC | 4 cut(s) | 298, 445, 961, 1207 |
| SfcI | CTRYAG | 4 cut(s) | 315, 690, 861, 1095 |
| SfoI | GGCGCC | 2 cut(s) | 142, 710 |
| Sfr274I | CTCGAG | 2 cut(s) | 552, 873 |
| SfuI | TTCGAA | 1 cut(s) | 21 |
| SlaI | CTCGAG | 2 cut(s) | 552, 873 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 385, 652 |
| SmlI | CTYRAG | 4 cut(s) | 507, 552, 873, 1371 |
| SmoI | CTYRAG | 4 cut(s) | 507, 552, 873, 1371 |
| SnaBI | TACGTA | 1 cut(s) | 797 |
| Sse9I | AATT | 5 cut(s) | 16, 459, 919, 1040, 1380 |
| SsiI | CCGC | 9 cut(s) | 95, 130, 174, 180, 330, 528, 608, 1152, 1357 |
| SspDI | GGCGCC | 2 cut(s) | 140, 708 |
| SspMI | CTAG | 1 cut(s) | 242 |
| SstI | GAGCTC | 1 cut(s) | 91 |
| StyD4I | CCNGG | 6 cut(s) | 82, 136, 673, 788, 913, 1047 |
| StyI | CCWWGG | 2 cut(s) | 189, 882 |
| TaaI | ACNGT | 5 cut(s) | 694, 1014, 1104, 1114, 1328 |
| TaiI | ACGT | 4 cut(s) | 155, 447, 799, 1270 |
| TaqI | TCGA | 5 cut(s) | 21, 553, 874, 907, 1353 |
| TaqII | GACCGA | 1 cut(s) | 890 |
| TasI | AATT | 5 cut(s) | 16, 459, 919, 1040, 1380 |
| TatI | WGTACW | 4 cut(s) | 147, 572, 982, 1028 |
| TauI | GCSGC | 3 cut(s) | 183, 332, 611 |
| TfiI | GAWTC | 1 cut(s) | 1156 |
| Tru1I | TTAA | 1 cut(s) | 1043 |
| Tru9I | TTAA | 1 cut(s) | 1043 |
| TscAI | CASTG | 4 cut(s) | 529, 873, 1019, 1117 |
| TseFI | GTSAC | 4 cut(s) | 256, 355, 661, 1375 |
| TseI | GCWGC | 5 cut(s) | 326, 698, 772, 863, 1094 |
| Tsp45I | GTSAC | 4 cut(s) | 256, 355, 661, 1375 |
| TspDTI | ATGAA | 5 cut(s) | 17, 55, 609, 648, 1053 |
| TspGWI | ACGGA | 1 cut(s) | 393 |
| TspRI | CASTG | 4 cut(s) | 529, 873, 1019, 1117 |
| Tth111I | GACNNNGTC | 1 cut(s) | 900 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 718 |
| XapI | RAATTY | 1 cut(s) | 16 |
| XceI | RCATGY | 2 cut(s) | 942, 1413 |
| XhoI | CTCGAG | 2 cut(s) | 552, 873 |
| XmnI | GAANNNNTTC | 1 cut(s) | 17 |
| XspI | CTAG | 1 cut(s) | 242 |
| ZrmI | AGTACT | 1 cut(s) | 984 |
| Zsp2I | ATGCAT | 1 cut(s) | 1147 |