MD07G1234800.v1.1

rhodanese-like domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0012988
Physical Location & Seq
Forward (+)
30822062 .. 30824630
2569 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1234800.v1.1.491

Sequence Viewer

Length: 1350 bp
ATGCTAAGCTGGAGGTCACCTCCATCACTGTCGCTGAGGATGCTATGGTTACCTCCACTGCACTCCGTAAACCCTAACCCTAGATTGCATCCCGCCTCTTCAGTTTTGCCGCCCTCCAATCGACCCCCTCAGTCGTTTTTCAACCCCAGTTGGATTCCGGTCTCCGATTCTCGCTGCGTCCCTCAAAGCATGACGCTTTCCAGGTGCTTCTCCGGGCCCACCAGTCCGGTCCCGATTCCGAGCTCTCCCGAGTCGGATAACTCGGATTCGCAGATTCTCGTGGTGGTCTCCTTCTACAAGTTCGCTGATTTTCCTGACCATGCTTCTCTGCGGCAACCATTGAAGCAGCTCTGCGAAGAACTGGTACCCGCATTTCATCCGCATTTCTATATTTTCTTAAATTTTAGCGGTATCATACTTGCCCGGGAAGGGATAAATGGGAGCATTTGTGGGACAAGAGAATCGGTGGAGAAAGTTCTTGAGTTCATCCAAAATGATAACTGCCTTGAGGGACTAAGAAGATTGGAGTCACTTGTTAGGGAAGATGCGCCCTTCAGATGGGATCATGTGAGGGTCAAGTTGAAGAAGGAGATTGTTAGTCTTGGAATGCCTGATGTATCTCCAATGGAAAAGGTCGGAAAGTATGTGAGTCCACGGGATTGGAATGCATTGATTAGTGATCCAGATACAGTGGTTATTGATGTGCGCAATAATTACGAAACTAGAATAGGGAAGTTCAAGGGAGCAGTTGATCCGTGCACTAAAGCATTCCGAGAGTTCCCATCTTGGGTAGACGATCAGTTTCAACCTTCAGAATCTGAGAATGGTCATTCAGAGGTGAAACTCAACAGTCCAAATGAAAGCATCAACAATCAGCTCGAGATATCAAAACCAAAAACACCTCTGAAAGTTGCCATGTACTGTACTGGGGGAATTAGATGTGAGAAAGCTTCAAGTTTTCTCCTCAGCAAGGGCTTCGAAGAGGTTTATCATCTAGAAGGCGGAATTCTGAAGTATCTTGAGGAAGTTCCGCGGACAGAGAGCCTGTGGGAGGGAGAGTGCTTTGTCTTTGACAAGAGAGTCTCGGTTGAGCATGGGTTAGCACAGGGAACTCACAAATTATGCTACGGGTGTAAGCAACCGGTCAGTGATGCCGATATGGAGTCTCCTCAGTGGGAACACGGAGTTACTTGTCCGTACTGTTTCTCGTCAAAATCTGATGAAGAGAAGGATAGGGCAAGAGCTCGACAAAGGCAATTTGAGACATGGGGGATCATCGATGGTCAGGACAAGGGACGGAAACCGGATAGTACCAAGCAGAGCGCTACTAATCTATCAAATTCAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Rhodanese

Protein Analysis

450

Amino Acids

50.66

Weight (kDa)

6.05

Isoelectric Point (pI)

52.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UPF0176_N PF17773 138 - 198 1.1e-10 UPF0176 acylphosphatase like domain
Rhodanese PF00581 220 - 341 1.2e-07 Rhodanese-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012988)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G40760
fragaria_vesca FvH4_7g26040
malus_domestica MD01G1168900.v1.1 MD07G1234800.v1.1
prunus_persica Prupe.2G265100_v2.0.a1
pyrus_communis pycom01g18170 pycom07g21240
rosa_chinensis RchiOBHm_Chr1g0372451
rosa_laevigata RLG00000026897
rosa_multiflora Rmu_sc0011709.1_g000010 Rmu_sc0019374.1_g000001
rosa_roxburghii Rroxscaffold_4G00284910
rosa_rugosa Rorug01G0372000
rosa_samantha Rh1AG380500 Rh1BG344100 Rh1CG357500 Rh1DG375300
rosa_wichuraiana Rw1G033460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1079
Acc16I TGCGCA 1 cut(s) 707
Acc65I GGTACC 1 cut(s) 364
AccB1I GGYRCC 1 cut(s) 364
AccI GTMKAC 1 cut(s) 792
AccII CGCG 1 cut(s) 1033
AciI CCGC 9 cut(s) 93, 110, 331, 369, 380, 408, 1002, 1031, 1033
AclWI GGATC 4 cut(s) 570, 674, 746, 1280
AcsI RAATTY 3 cut(s) 400, 1005, 1339
AcuI CTGAAG 4 cut(s) 84, 538, 795, 1031
AfaI GTAC 5 cut(s) 366, 920, 925, 1199, 1312
AfeI AGCGCT 1 cut(s) 1324
AfiI CCNNNNNNNGG 5 cut(s) 429, 558, 787, 970, 1051
AgeI ACCGGT 1 cut(s) 1141
AgsI TTSAA 6 cut(s) 142, 343, 583, 739, 806, 954
AjnI CCWGG 1 cut(s) 200
AluBI AGCT 6 cut(s) 9, 243, 349, 877, 950, 1244
AluI AGCT 6 cut(s) 9, 243, 349, 877, 950, 1244
Alw21I GWGCWC 3 cut(s) 245, 761, 1246
Alw26I GTCTC 5 cut(s) 166, 292, 1087, 1170, 1256
Alw44I GTGCAC 1 cut(s) 757
AlwI GGATC 4 cut(s) 570, 674, 746, 1280
AlwNI CAGNNNCTG 1 cut(s) 818
Ama87I CYCGRG 3 cut(s) 248, 423, 878
Aor51HI AGCGCT 1 cut(s) 1324
AoxI GGCC 1 cut(s) 215
ApaI GGGCCC 1 cut(s) 219
ApaLI GTGCAC 1 cut(s) 757
ApeKI GCWGC 2 cut(s) 174, 346
ApoI RAATTY 3 cut(s) 400, 1005, 1339
AsiGI ACCGGT 1 cut(s) 1141
Asp718I GGTACC 1 cut(s) 364
AspLEI GCGC 3 cut(s) 550, 708, 1325
AspS9I GGNCC 3 cut(s) 215, 216, 229
AsuC2I CCSGG 3 cut(s) 214, 424, 425
AsuHPI GGTGA 2 cut(s) 9, 850
AsuII TTCGAA 1 cut(s) 978
AvaI CYCGRG 3 cut(s) 248, 423, 878
AvaII GGWCC 1 cut(s) 229
BaeGI GKGCMC 2 cut(s) 219, 761
BaeI ACNNNNGTAYC 2 cut(s) 678, 711
BanI GGYRCC 1 cut(s) 364
BanII GRGCYC 3 cut(s) 219, 245, 1246
BarI GAAGNNNNNNTAC 2 cut(s) 348, 380
BauI CACGAG 1 cut(s) 278
Bbv12I GWGCWC 3 cut(s) 245, 761, 1246
BbvCI CCTCAGC 2 cut(s) 35, 965
BbvI GCAGC 2 cut(s) 161, 358
BccI CCATC 4 cut(s) 31, 552, 790, 1274
BcgI CGANNNNNNTGC 2 cut(s) 958, 992
BciT130I CCWGG 1 cut(s) 202
BcnI CCSGG 3 cut(s) 214, 424, 425
BcoDI GTCTC 5 cut(s) 166, 292, 1087, 1170, 1256
BfaI CTAG 3 cut(s) 81, 723, 995
BfoI RGCGCY 1 cut(s) 1326
BisI GCNGC 4 cut(s) 110, 175, 332, 347
BlpI GCTNAGC 1 cut(s) 5
BlsI GCNGC 4 cut(s) 111, 176, 333, 348
Bme1390I CCNGG 4 cut(s) 202, 214, 424, 425
Bme18I GGWCC 1 cut(s) 229
BmeT110I CYCGRG 3 cut(s) 248, 423, 878
BmgT120I GGNCC 3 cut(s) 215, 216, 229
BmiI GGNNCC 3 cut(s) 217, 231, 366
BmrFI CCNGG 4 cut(s) 202, 214, 424, 425
BmrI ACTGGG 2 cut(s) 141, 936
BmsI GCATC 5 cut(s) 30, 97, 535, 873, 1141
BmuI ACTGGG 2 cut(s) 141, 936
BplI GAGNNNNNCTC 1 cut(s) 36
BpmI CTGGAG 1 cut(s) 31
Bpu10I CCTNAGC 2 cut(s) 35, 965
Bpu1102I GCTNAGC 1 cut(s) 5
Bpu14I TTCGAA 1 cut(s) 978
BpuEI CTTGAG 3 cut(s) 500, 527, 1040
BpuMI CCSGG 3 cut(s) 214, 424, 425
Bsa29I ATCGAT 1 cut(s) 1278
BsaI GGTCTC 2 cut(s) 166, 292
BsaJI CCNNGG 3 cut(s) 423, 653, 1031
BsaWI WCCGGW 4 cut(s) 157, 226, 1141, 1303
BsaXI ACNNNNNCTCC 4 cut(s) 433, 463, 1043, 1073
Bsc4I CCNNNNNNNGG 5 cut(s) 429, 558, 787, 970, 1051
Bse118I RCCGGY 1 cut(s) 1141
Bse1I ACTGG 4 cut(s) 147, 222, 366, 931
BseBI CCWGG 1 cut(s) 202
BseCI ATCGAT 1 cut(s) 1278
BseDI CCNNGG 3 cut(s) 423, 653, 1031
BseGI GGATG 4 cut(s) 45, 88, 376, 486
BseLI CCNNNNNNNGG 5 cut(s) 429, 558, 787, 970, 1051
BseMII CTCAG 5 cut(s) 26, 143, 810, 979, 1184
BseNI ACTGG 4 cut(s) 147, 222, 366, 931
BseRI GAGGAG 2 cut(s) 953, 1158
BseSI GKGCMC 2 cut(s) 219, 761
BseXI GCAGC 2 cut(s) 161, 358
BsgI GTGCAG 1 cut(s) 44
Bsh1236I CGCG 1 cut(s) 1033
BshFI GGCC 1 cut(s) 217
BshNI GGYRCC 1 cut(s) 364
BshTI ACCGGT 1 cut(s) 1141
BshVI ATCGAT 1 cut(s) 1278
BsiHKAI GWGCWC 3 cut(s) 245, 761, 1246
BsiHKCI CYCGRG 3 cut(s) 248, 423, 878
BsiSI CCGG 6 cut(s) 158, 213, 227, 424, 1142, 1304
BslFI GGGAC 5 cut(s) 164, 215, 466, 525, 1308
BslI CCNNNNNNNGG 5 cut(s) 429, 558, 787, 970, 1051
BsmAI GTCTC 5 cut(s) 166, 292, 1087, 1170, 1256
BsmFI GGGAC 5 cut(s) 164, 215, 466, 525, 1308
BsmI GAATGC 3 cut(s) 612, 670, 767
BsnI GGCC 1 cut(s) 217
Bso31I GGTCTC 2 cut(s) 166, 292
BsoBI CYCGRG 3 cut(s) 248, 423, 878
Bsp119I TTCGAA 1 cut(s) 978
Bsp120I GGGCCC 1 cut(s) 215
Bsp1286I GDGCHC 4 cut(s) 219, 245, 761, 1246
Bsp143I GATC 5 cut(s) 562, 679, 751, 796, 1272
Bsp1720I GCTNAGC 1 cut(s) 5
BspACI CCGC 9 cut(s) 93, 110, 331, 369, 380, 408, 1002, 1031, 1033
BspANI GGCC 1 cut(s) 217
BspCNI CTCAG 5 cut(s) 27, 142, 811, 978, 1183
BspDI ATCGAT 1 cut(s) 1278
BspFNI CGCG 1 cut(s) 1033
BspLI GGNNCC 3 cut(s) 217, 231, 366
BspPI GGATC 4 cut(s) 570, 674, 746, 1280
BspT104I TTCGAA 1 cut(s) 978
BspT107I GGYRCC 1 cut(s) 364
BspTNI GGTCTC 2 cut(s) 166, 292
BsrFI RCCGGY 1 cut(s) 1141
BsrI ACTGG 4 cut(s) 147, 222, 366, 931
BssAI RCCGGY 1 cut(s) 1141
BssECI CCNNGG 3 cut(s) 423, 653, 1031
BssMI GATC 5 cut(s) 562, 679, 751, 796, 1272
BssSI CACGAG 1 cut(s) 278
Bst2BI CACGAG 1 cut(s) 278
Bst2UI CCWGG 1 cut(s) 202
Bst4CI ACNGT 5 cut(s) 30, 691, 851, 923, 1202
Bst6I CTCTTC 3 cut(s) 103, 975, 1218
BstBI TTCGAA 1 cut(s) 978
BstDEI CTNAG 7 cut(s) 5, 35, 129, 515, 819, 965, 1170
BstDSI CCRYGG 2 cut(s) 653, 1031
BstEII GGTNACC 2 cut(s) 15, 48
BstENI CCTNNNNNAGG 2 cut(s) 968, 1049
BstF5I GGATG 4 cut(s) 45, 88, 376, 486
BstFNI CGCG 1 cut(s) 1033
BstH2I RGCGCY 1 cut(s) 1326
BstHHI GCGC 3 cut(s) 550, 708, 1325
BstKTI GATC 5 cut(s) 565, 682, 754, 799, 1275
BstMAI GTCTC 5 cut(s) 166, 292, 1087, 1170, 1256
BstMBI GATC 5 cut(s) 562, 679, 751, 796, 1272
BstMWI GCNNNNNNNGC 1 cut(s) 40
BstNI CCWGG 1 cut(s) 202
BstPI GGTNACC 2 cut(s) 15, 48
BstSCI CCNGG 4 cut(s) 200, 212, 422, 423
BstSLI GKGCMC 2 cut(s) 219, 761
BstUI CGCG 1 cut(s) 1033
BstV1I GCAGC 2 cut(s) 161, 358
BstXI CCANNNNNNTGG 1 cut(s) 660
Bsu15I ATCGAT 1 cut(s) 1278
BsuRI GGCC 1 cut(s) 217
BsuTUI ATCGAT 1 cut(s) 1278
BtgI CCRYGG 2 cut(s) 653, 1031
BtsCI GGATG 4 cut(s) 45, 88, 376, 486
BtsI GCAGTG 1 cut(s) 56
BtsIMutI CAGTG 5 cut(s) 26, 56, 696, 1153, 1178
CaiI CAGNNNCTG 1 cut(s) 818
CfoI GCGC 3 cut(s) 550, 708, 1325
Cfr10I RCCGGY 1 cut(s) 1141
Cfr13I GGNCC 3 cut(s) 215, 216, 229
Cfr42I CCGCGG 1 cut(s) 1034
Cfr9I CCCGGG 1 cut(s) 423
ClaI ATCGAT 1 cut(s) 1278
CseI GACGC 2 cut(s) 166, 202
Csp6I GTAC 5 cut(s) 365, 919, 924, 1198, 1311
CspAI ACCGGT 1 cut(s) 1141
CviAII CATG 6 cut(s) 190, 320, 566, 916, 1094, 1266
CviJI RGCY 9 cut(s) 9, 217, 243, 349, 877, 950, 975, 1044, 1244
CviKI_1 RGCY 9 cut(s) 9, 217, 243, 349, 877, 950, 975, 1044, 1244
CviQI GTAC 5 cut(s) 365, 919, 924, 1198, 1311
DdeI CTNAG 7 cut(s) 5, 35, 129, 515, 819, 965, 1170
DpnI GATC 5 cut(s) 564, 681, 753, 798, 1274
DpnII GATC 5 cut(s) 562, 679, 751, 796, 1272
DrdI GACNNNNNNGTC 1 cut(s) 1079
DseDI GACNNNNNNGTC 1 cut(s) 1079
Eam1104I CTCTTC 3 cut(s) 103, 975, 1218
EarI CTCTTC 3 cut(s) 103, 975, 1218
EciI GGCGGA 1 cut(s) 1017
Ecl136II GAGCTC 2 cut(s) 243, 1244
Eco24I GRGCYC 3 cut(s) 219, 245, 1246
Eco31I GGTCTC 2 cut(s) 166, 292
Eco32I GATATC 1 cut(s) 885
Eco47I GGWCC 1 cut(s) 229
Eco47III AGCGCT 1 cut(s) 1324
Eco53kI GAGCTC 2 cut(s) 243, 1244
Eco57I CTGAAG 4 cut(s) 84, 538, 795, 1031
Eco88I CYCGRG 3 cut(s) 248, 423, 878
Eco91I GGTNACC 2 cut(s) 15, 48
EcoICRI GAGCTC 2 cut(s) 243, 1244
EcoNI CCTNNNNNAGG 2 cut(s) 968, 1049
EcoO65I GGTNACC 2 cut(s) 15, 48
EcoRI GAATTC 1 cut(s) 1005
EcoRII CCWGG 1 cut(s) 200
EcoRV GATATC 1 cut(s) 885
EcoT22I ATGCAT 1 cut(s) 670
EcoT38I GRGCYC 3 cut(s) 219, 245, 1246
FaeI CATG 6 cut(s) 193, 323, 569, 919, 1097, 1269
FaqI GGGAC 5 cut(s) 164, 215, 466, 525, 1308
FatI CATG 6 cut(s) 189, 319, 565, 915, 1093, 1265
FauI CCCGC 2 cut(s) 100, 376
FblI GTMKAC 1 cut(s) 792
Fnu4HI GCNGC 4 cut(s) 110, 175, 332, 347
FokI GGATG 4 cut(s) 52, 75, 363, 473
FriOI GRGCYC 3 cut(s) 219, 245, 1246
Fsp4HI GCNGC 4 cut(s) 110, 175, 332, 347
FspBI CTAG 3 cut(s) 81, 723, 995
FspI TGCGCA 1 cut(s) 707
GlaI GCGC 3 cut(s) 549, 707, 1324
GluI GCNGC 4 cut(s) 110, 175, 332, 347
GsuI CTGGAG 1 cut(s) 31
HaeII RGCGCY 1 cut(s) 1326
HaeIII GGCC 1 cut(s) 217
HapII CCGG 6 cut(s) 158, 213, 227, 424, 1142, 1304
HgaI GACGC 2 cut(s) 166, 202
HhaI GCGC 3 cut(s) 550, 708, 1325
Hin1II CATG 6 cut(s) 193, 323, 569, 919, 1097, 1269
Hin6I GCGC 3 cut(s) 548, 706, 1323
HinP1I GCGC 3 cut(s) 548, 706, 1323
HindIII AAGCTT 1 cut(s) 948
HpaII CCGG 6 cut(s) 158, 213, 227, 424, 1142, 1304
HphI GGTGA 2 cut(s) 9, 850
Hpy166II GTNNAC 4 cut(s) 70, 653, 759, 793
Hpy188III TCNNGA 9 cut(s) 232, 248, 314, 479, 683, 880, 995, 1019, 1286
Hpy8I GTNNAC 4 cut(s) 70, 653, 759, 793
HpyAV CCTTC 7 cut(s) 301, 422, 562, 580, 819, 992, 1222
HpyCH4III ACNGT 5 cut(s) 30, 691, 851, 923, 1202
HpyCH4V TGCA 4 cut(s) 61, 88, 668, 759
HpyF10VI GCNNNNNNNGC 1 cut(s) 40
HpyF3I CTNAG 7 cut(s) 5, 35, 129, 515, 819, 965, 1170
Hsp92II CATG 6 cut(s) 193, 323, 569, 919, 1097, 1269
HspAI GCGC 3 cut(s) 548, 706, 1323
KpnI GGTACC 1 cut(s) 368
KspI CCGCGG 1 cut(s) 1034
Kzo9I GATC 5 cut(s) 562, 679, 751, 796, 1272
LmnI GCTCC 2 cut(s) 441, 743
Lsp1109I GCAGC 2 cut(s) 161, 358
LweI GCATC 5 cut(s) 30, 97, 535, 873, 1141
MaeI CTAG 3 cut(s) 81, 723, 995
MaeIII GTNAC 4 cut(s) 15, 48, 528, 1186
MalI GATC 5 cut(s) 564, 681, 753, 798, 1274
MboI GATC 5 cut(s) 562, 679, 751, 796, 1272
MboII GAAGA 7 cut(s) 90, 368, 531, 554, 595, 992, 1235
MhlI GDGCHC 4 cut(s) 219, 245, 761, 1246
MluCI AATT 7 cut(s) 400, 712, 933, 1005, 1118, 1256, 1339
MlyI GAGTC 5 cut(s) 260, 536, 658, 1089, 1172
MmeI TCCRAC 3 cut(s) 131, 234, 616
Mph1103I ATGCAT 1 cut(s) 670
MseI TTAA 1 cut(s) 398
MspA1I CMGCKG 1 cut(s) 1033
MspI CCGG 6 cut(s) 158, 213, 227, 424, 1142, 1304
MspR9I CCNGG 4 cut(s) 202, 214, 424, 425
Mva1269I GAATGC 3 cut(s) 612, 670, 767
MvaI CCWGG 1 cut(s) 202
MvnI CGCG 1 cut(s) 1033
MwoI GCNNNNNNNGC 1 cut(s) 40
NciI CCSGG 3 cut(s) 214, 424, 425
NdeII GATC 5 cut(s) 562, 679, 751, 796, 1272
NlaIII CATG 6 cut(s) 193, 323, 569, 919, 1097, 1269
NlaIV GGNNCC 3 cut(s) 217, 231, 366
NmuCI GTSAC 2 cut(s) 15, 528
NsbI TGCGCA 1 cut(s) 707
NsiI ATGCAT 1 cut(s) 670
NspV TTCGAA 1 cut(s) 978
PaeR7I CTCGAG 1 cut(s) 878
PctI GAATGC 3 cut(s) 612, 670, 767
PfeI GAWTC 7 cut(s) 154, 167, 235, 266, 274, 461, 815
PinAI ACCGGT 1 cut(s) 1141
PkrI GCNGC 4 cut(s) 111, 176, 333, 348
PleI GAGTC 5 cut(s) 259, 535, 657, 1088, 1171
PpsI GAGTC 5 cut(s) 259, 535, 657, 1088, 1171
Psp124BI GAGCTC 2 cut(s) 245, 1246
Psp6I CCWGG 1 cut(s) 200
PspEI GGTNACC 2 cut(s) 15, 48
PspGI CCWGG 1 cut(s) 200
PspN4I GGNNCC 3 cut(s) 217, 231, 366
PspOMI GGGCCC 1 cut(s) 215
PspPI GGNCC 3 cut(s) 215, 216, 229
PstNI CAGNNNCTG 1 cut(s) 818
RsaI GTAC 5 cut(s) 366, 920, 925, 1199, 1312
RsaNI GTAC 5 cut(s) 365, 919, 924, 1198, 1311
SacI GAGCTC 2 cut(s) 245, 1246
SacII CCGCGG 1 cut(s) 1034
SaqAI TTAA 1 cut(s) 398
SatI GCNGC 4 cut(s) 110, 175, 332, 347
Sau3AI GATC 5 cut(s) 562, 679, 751, 796, 1272
Sau96I GGNCC 3 cut(s) 215, 216, 229
SchI GAGTC 5 cut(s) 260, 536, 658, 1089, 1172
ScrFI CCNGG 4 cut(s) 202, 214, 424, 425
SduI GDGCHC 4 cut(s) 219, 245, 761, 1246
SfaNI GCATC 5 cut(s) 30, 97, 535, 873, 1141
Sfr274I CTCGAG 1 cut(s) 878
Sfr303I CCGCGG 1 cut(s) 1034
SfuI TTCGAA 1 cut(s) 978
SgrBI CCGCGG 1 cut(s) 1034
SinI GGWCC 1 cut(s) 229
SlaI CTCGAG 1 cut(s) 878
SmaI CCCGGG 1 cut(s) 425
SmlI CTYRAG 4 cut(s) 479, 506, 878, 1019
SmoI CTYRAG 4 cut(s) 479, 506, 878, 1019
Sse9I AATT 7 cut(s) 400, 712, 933, 1005, 1118, 1256, 1339
SsiI CCGC 9 cut(s) 93, 110, 331, 369, 380, 408, 1002, 1031, 1033
SspMI CTAG 3 cut(s) 81, 723, 995
SstI GAGCTC 2 cut(s) 245, 1246
StyD4I CCNGG 4 cut(s) 200, 212, 422, 423
TaaI ACNGT 5 cut(s) 30, 691, 851, 923, 1202
TaqI TCGA 5 cut(s) 121, 879, 978, 1246, 1278
TasI AATT 7 cut(s) 400, 712, 933, 1005, 1118, 1256, 1339
TatI WGTACW 2 cut(s) 918, 923
TauI GCSGC 2 cut(s) 112, 334
TfiI GAWTC 7 cut(s) 154, 167, 235, 266, 274, 461, 815
Tru1I TTAA 1 cut(s) 398
Tru9I TTAA 1 cut(s) 398
TscAI CASTG 5 cut(s) 33, 63, 696, 1153, 1178
TseFI GTSAC 2 cut(s) 15, 528
TseI GCWGC 2 cut(s) 174, 346
Tsp45I GTSAC 2 cut(s) 15, 528
TspDTI ATGAA 4 cut(s) 365, 475, 873, 1236
TspGWI ACGGA 5 cut(s) 55, 744, 1185, 1197, 1312
TspMI CCCGGG 1 cut(s) 423
TspRI CASTG 5 cut(s) 33, 63, 696, 1153, 1178
VneI GTGCAC 1 cut(s) 757
VpaK11BI GGWCC 1 cut(s) 229
XagI CCTNNNNNAGG 2 cut(s) 968, 1049
XapI RAATTY 3 cut(s) 400, 1005, 1339
XbaI TCTAGA 1 cut(s) 994
XhoI CTCGAG 1 cut(s) 878
XmaI CCCGGG 1 cut(s) 423
XmiI GTMKAC 1 cut(s) 792
XspI CTAG 3 cut(s) 81, 723, 995
Zsp2I ATGCAT 1 cut(s) 670
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.