rhodanese-like domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G40760 |
| fragaria_vesca | FvH4_7g26040 |
| malus_domestica | MD01G1168900.v1.1 MD07G1234800.v1.1 |
| prunus_persica | Prupe.2G265100_v2.0.a1 |
| pyrus_communis | pycom01g18170 pycom07g21240 |
| rosa_chinensis | RchiOBHm_Chr1g0372451 |
| rosa_laevigata | RLG00000026897 |
| rosa_multiflora | Rmu_sc0011709.1_g000010 Rmu_sc0019374.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00284910 |
| rosa_rugosa | Rorug01G0372000 |
| rosa_samantha | Rh1AG380500 Rh1BG344100 Rh1CG357500 Rh1DG375300 |
| rosa_wichuraiana | Rw1G033460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 731 |
| AciI | CCGC | 3 cut(s) | 331, 469, 1305 |
| AclWI | GGATC | 3 cut(s) | 594, 698, 770 |
| AcoI | YGGCCR | 1 cut(s) | 214 |
| AcsI | RAATTY | 3 cut(s) | 273, 1029, 1363 |
| AcuI | CTGAAG | 2 cut(s) | 562, 1055 |
| AcyI | GRCGYC | 1 cut(s) | 177 |
| AdeI | CACNNNGTG | 1 cut(s) | 164 |
| AfaI | GTAC | 5 cut(s) | 13, 944, 949, 1223, 1351 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 475, 514, 582, 811, 848, 1075, 1315, 1316 |
| AgsI | TTSAA | 7 cut(s) | 343, 458, 607, 763, 830, 978, 1368 |
| AluBI | AGCT | 6 cut(s) | 243, 346, 543, 901, 974, 1268 |
| AluI | AGCT | 6 cut(s) | 243, 346, 543, 901, 974, 1268 |
| Alw21I | GWGCWC | 2 cut(s) | 245, 1270 |
| Alw26I | GTCTC | 4 cut(s) | 292, 1052, 1194, 1280 |
| AlwI | GGATC | 3 cut(s) | 594, 698, 770 |
| Ama87I | CYCGRG | 2 cut(s) | 423, 509 |
| AoxI | GGCC | 2 cut(s) | 214, 1306 |
| ApeKI | GCWGC | 3 cut(s) | 346, 408, 557 |
| ApoI | RAATTY | 3 cut(s) | 273, 1029, 1363 |
| AspLEI | GCGC | 2 cut(s) | 63, 732 |
| AspS9I | GGNCC | 2 cut(s) | 420, 1307 |
| AsuC2I | CCSGG | 1 cut(s) | 797 |
| AsuHPI | GGTGA | 3 cut(s) | 42, 237, 489 |
| AsuII | TTCGAA | 1 cut(s) | 1002 |
| AvaI | CYCGRG | 2 cut(s) | 423, 509 |
| AvaII | GGWCC | 1 cut(s) | 420 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 702, 735 |
| BalI | TGGCCA | 1 cut(s) | 216 |
| BanII | GRGCYC | 3 cut(s) | 245, 509, 1270 |
| BauI | CACGAG | 1 cut(s) | 278 |
| Bbv12I | GWGCWC | 2 cut(s) | 245, 1270 |
| BbvCI | CCTCAGC | 1 cut(s) | 927 |
| BbvI | GCAGC | 3 cut(s) | 333, 420, 569 |
| BccI | CCATC | 3 cut(s) | 132, 534, 576 |
| BceAI | ACGGC | 2 cut(s) | 190, 421 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 982, 1016 |
| BcnI | CCSGG | 1 cut(s) | 797 |
| BcoDI | GTCTC | 4 cut(s) | 292, 1052, 1194, 1280 |
| BfaI | CTAG | 6 cut(s) | 81, 540, 747, 786, 902, 1019 |
| BglII | AGATCT | 1 cut(s) | 906 |
| BisI | GCNGC | 5 cut(s) | 332, 347, 409, 558, 1306 |
| BlsI | GCNGC | 5 cut(s) | 333, 348, 410, 559, 1307 |
| BmcAI | AGTACT | 1 cut(s) | 1351 |
| Bme1390I | CCNGG | 1 cut(s) | 797 |
| Bme18I | GGWCC | 1 cut(s) | 420 |
| BmeT110I | CYCGRG | 2 cut(s) | 423, 509 |
| BmgT120I | GGNCC | 2 cut(s) | 420, 1307 |
| BmiI | GGNNCC | 3 cut(s) | 421, 422, 840 |
| BmrFI | CCNGG | 1 cut(s) | 797 |
| BmrI | ACTGGG | 1 cut(s) | 960 |
| BmsI | GCATC | 5 cut(s) | 30, 408, 559, 953, 1165 |
| BmuI | ACTGGG | 1 cut(s) | 960 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 791, 823, 1336, 1368 |
| Bpu10I | CCTNAGC | 3 cut(s) | 5, 927, 989 |
| Bpu14I | TTCGAA | 1 cut(s) | 1002 |
| BpuEI | CTTGAG | 3 cut(s) | 184, 458, 1064 |
| BpuMI | CCSGG | 1 cut(s) | 797 |
| BsaHI | GRCGYC | 1 cut(s) | 177 |
| BsaI | GGTCTC | 1 cut(s) | 292 |
| BsaJI | CCNNGG | 2 cut(s) | 510, 677 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 34, 1067, 1097 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 475, 514, 582, 811, 848, 1075, 1315, 1316 |
| Bse118I | RCCGGY | 1 cut(s) | 634 |
| Bse1I | ACTGG | 4 cut(s) | 222, 955, 1166, 1332 |
| BseDI | CCNNGG | 2 cut(s) | 510, 677 |
| BseGI | GGATG | 3 cut(s) | 45, 124, 826 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 475, 514, 582, 811, 848, 1075, 1315, 1316 |
| BseMII | CTCAG | 4 cut(s) | 26, 834, 941, 1208 |
| BseNI | ACTGG | 4 cut(s) | 222, 955, 1166, 1332 |
| BseRI | GAGGAG | 3 cut(s) | 527, 540, 1182 |
| BseXI | GCAGC | 3 cut(s) | 333, 420, 569 |
| BshFI | GGCC | 2 cut(s) | 216, 1308 |
| BsiHKAI | GWGCWC | 2 cut(s) | 245, 1270 |
| BsiHKCI | CYCGRG | 2 cut(s) | 423, 509 |
| BsiSI | CCGG | 2 cut(s) | 635, 796 |
| BslFI | GGGAC | 4 cut(s) | 164, 210, 215, 433 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 475, 514, 582, 811, 848, 1075, 1315, 1316 |
| BsmAI | GTCTC | 4 cut(s) | 292, 1052, 1194, 1280 |
| BsmFI | GGGAC | 4 cut(s) | 164, 210, 215, 433 |
| BsmI | GAATGC | 4 cut(s) | 636, 694, 791, 853 |
| BsnI | GGCC | 2 cut(s) | 216, 1308 |
| Bso31I | GGTCTC | 1 cut(s) | 292 |
| BsoBI | CYCGRG | 2 cut(s) | 423, 509 |
| Bsp119I | TTCGAA | 1 cut(s) | 1002 |
| Bsp1286I | GDGCHC | 3 cut(s) | 245, 509, 1270 |
| Bsp143I | GATC | 4 cut(s) | 586, 703, 775, 906 |
| BspACI | CCGC | 3 cut(s) | 331, 469, 1305 |
| BspANI | GGCC | 2 cut(s) | 216, 1308 |
| BspCNI | CTCAG | 4 cut(s) | 27, 835, 940, 1207 |
| BspLI | GGNNCC | 3 cut(s) | 421, 422, 840 |
| BspPI | GGATC | 3 cut(s) | 594, 698, 770 |
| BspT104I | TTCGAA | 1 cut(s) | 1002 |
| BspTNI | GGTCTC | 1 cut(s) | 292 |
| BsrFI | RCCGGY | 1 cut(s) | 634 |
| BsrI | ACTGG | 4 cut(s) | 222, 955, 1166, 1332 |
| BssAI | RCCGGY | 1 cut(s) | 634 |
| BssECI | CCNNGG | 2 cut(s) | 510, 677 |
| BssMI | GATC | 4 cut(s) | 586, 703, 775, 906 |
| BssNI | GRCGYC | 1 cut(s) | 177 |
| BssSI | CACGAG | 1 cut(s) | 278 |
| BssT1I | CCWWGG | 1 cut(s) | 677 |
| Bst2BI | CACGAG | 1 cut(s) | 278 |
| Bst4CI | ACNGT | 5 cut(s) | 114, 135, 715, 947, 1226 |
| Bst6I | CTCTTC | 3 cut(s) | 481, 999, 1242 |
| BstACI | GRCGYC | 1 cut(s) | 177 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 963 |
| BstBI | TTCGAA | 1 cut(s) | 1002 |
| BstC8I | GCNNGC | 1 cut(s) | 636 |
| BstDEI | CTNAG | 6 cut(s) | 5, 35, 843, 927, 989, 1194 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1073 |
| BstF5I | GGATG | 3 cut(s) | 45, 124, 826 |
| BstHHI | GCGC | 2 cut(s) | 63, 732 |
| BstKTI | GATC | 4 cut(s) | 589, 706, 778, 909 |
| BstMAI | GTCTC | 4 cut(s) | 292, 1052, 1194, 1280 |
| BstMBI | GATC | 4 cut(s) | 586, 703, 775, 906 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 213, 405, 468, 963 |
| BstSCI | CCNGG | 1 cut(s) | 795 |
| BstV1I | GCAGC | 3 cut(s) | 333, 420, 569 |
| BstX2I | RGATCY | 1 cut(s) | 906 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 684 |
| BstYI | RGATCY | 1 cut(s) | 906 |
| BsuRI | GGCC | 2 cut(s) | 216, 1308 |
| BtgZI | GCGATG | 1 cut(s) | 477 |
| BtsCI | GGATG | 3 cut(s) | 45, 124, 826 |
| BtsI | GCAGTG | 1 cut(s) | 56 |
| BtsIMutI | CAGTG | 5 cut(s) | 32, 56, 438, 1177, 1202 |
| Cac8I | GCNNGC | 1 cut(s) | 636 |
| CfoI | GCGC | 2 cut(s) | 63, 732 |
| Cfr10I | RCCGGY | 1 cut(s) | 634 |
| Cfr13I | GGNCC | 2 cut(s) | 420, 1307 |
| CseI | GACGC | 2 cut(s) | 166, 202 |
| Csp6I | GTAC | 5 cut(s) | 12, 943, 948, 1222, 1350 |
| CviAII | CATG | 7 cut(s) | 190, 320, 530, 590, 940, 1118, 1290 |
| CviQI | GTAC | 5 cut(s) | 12, 943, 948, 1222, 1350 |
| DdeI | CTNAG | 6 cut(s) | 5, 35, 843, 927, 989, 1194 |
| DpnI | GATC | 4 cut(s) | 588, 705, 777, 908 |
| DpnII | GATC | 4 cut(s) | 586, 703, 775, 906 |
| DraIII | CACNNNGTG | 1 cut(s) | 164 |
| EaeI | YGGCCR | 1 cut(s) | 214 |
| Eam1104I | CTCTTC | 3 cut(s) | 481, 999, 1242 |
| EarI | CTCTTC | 3 cut(s) | 481, 999, 1242 |
| Ecl136II | GAGCTC | 2 cut(s) | 243, 1268 |
| Eco130I | CCWWGG | 1 cut(s) | 677 |
| Eco24I | GRGCYC | 3 cut(s) | 245, 509, 1270 |
| Eco31I | GGTCTC | 1 cut(s) | 292 |
| Eco47I | GGWCC | 1 cut(s) | 420 |
| Eco53kI | GAGCTC | 2 cut(s) | 243, 1268 |
| Eco57I | CTGAAG | 2 cut(s) | 562, 1055 |
| Eco88I | CYCGRG | 2 cut(s) | 423, 509 |
| EcoICRI | GAGCTC | 2 cut(s) | 243, 1268 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1073 |
| EcoO109I | RGGNCCY | 1 cut(s) | 420 |
| EcoRI | GAATTC | 1 cut(s) | 1029 |
| EcoT14I | CCWWGG | 1 cut(s) | 677 |
| EcoT22I | ATGCAT | 1 cut(s) | 694 |
| EcoT38I | GRGCYC | 3 cut(s) | 245, 509, 1270 |
| ErhI | CCWWGG | 1 cut(s) | 677 |
| FaeI | CATG | 7 cut(s) | 193, 323, 533, 593, 943, 1121, 1293 |
| FaqI | GGGAC | 4 cut(s) | 164, 210, 215, 433 |
| FatI | CATG | 7 cut(s) | 189, 319, 529, 589, 939, 1117, 1289 |
| FauNDI | CATATG | 1 cut(s) | 413 |
| Fnu4HI | GCNGC | 5 cut(s) | 332, 347, 409, 558, 1306 |
| FokI | GGATG | 3 cut(s) | 52, 111, 833 |
| FriOI | GRGCYC | 3 cut(s) | 245, 509, 1270 |
| Fsp4HI | GCNGC | 5 cut(s) | 332, 347, 409, 558, 1306 |
| FspBI | CTAG | 6 cut(s) | 81, 540, 747, 786, 902, 1019 |
| FspI | TGCGCA | 1 cut(s) | 731 |
| GlaI | GCGC | 2 cut(s) | 62, 731 |
| GluI | GCNGC | 5 cut(s) | 332, 347, 409, 558, 1306 |
| HaeIII | GGCC | 2 cut(s) | 216, 1308 |
| HapII | CCGG | 2 cut(s) | 635, 796 |
| HgaI | GACGC | 2 cut(s) | 166, 202 |
| HhaI | GCGC | 2 cut(s) | 63, 732 |
| Hin1I | GRCGYC | 1 cut(s) | 177 |
| Hin1II | CATG | 7 cut(s) | 193, 323, 533, 593, 943, 1121, 1293 |
| Hin6I | GCGC | 2 cut(s) | 61, 730 |
| HinP1I | GCGC | 2 cut(s) | 61, 730 |
| HindIII | AAGCTT | 1 cut(s) | 972 |
| HinfI | GANTC | 7 cut(s) | 167, 251, 266, 428, 494, 673, 1187 |
| HpaII | CCGG | 2 cut(s) | 635, 796 |
| HphI | GGTGA | 3 cut(s) | 42, 237, 489 |
| Hpy166II | GTNNAC | 2 cut(s) | 12, 1325 |
| Hpy188I | TCNGA | 7 cut(s) | 109, 265, 581, 838, 859, 1035, 1243 |
| Hpy188III | TCNNGA | 6 cut(s) | 151, 314, 707, 1019, 1043, 1055 |
| Hpy8I | GTNNAC | 2 cut(s) | 12, 1325 |
| HpyAV | CCTTC | 9 cut(s) | 63, 301, 389, 586, 604, 649, 843, 1016, 1246 |
| HpyCH4III | ACNGT | 5 cut(s) | 114, 135, 715, 947, 1226 |
| HpyCH4V | TGCA | 6 cut(s) | 17, 88, 389, 572, 692, 878 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 213, 405, 468, 963 |
| HpyF3I | CTNAG | 6 cut(s) | 5, 35, 843, 927, 989, 1194 |
| Hsp92I | GRCGYC | 1 cut(s) | 177 |
| Hsp92II | CATG | 7 cut(s) | 193, 323, 533, 593, 943, 1121, 1293 |
| HspAI | GCGC | 2 cut(s) | 61, 730 |
| KflI | GGGWCCC | 1 cut(s) | 420 |
| KroI | GCCGGC | 1 cut(s) | 634 |
| KroNI | GCCGGC | 1 cut(s) | 636 |
| Kzo9I | GATC | 4 cut(s) | 586, 703, 775, 906 |
| LmnI | GCTCC | 2 cut(s) | 68, 767 |
| Lsp1109I | GCAGC | 3 cut(s) | 333, 420, 569 |
| LweI | GCATC | 5 cut(s) | 30, 408, 559, 953, 1165 |
| MaeI | CTAG | 6 cut(s) | 81, 540, 747, 786, 902, 1019 |
| MaeIII | GTNAC | 2 cut(s) | 48, 1226 |
| MalI | GATC | 4 cut(s) | 588, 705, 777, 908 |
| MboI | GATC | 4 cut(s) | 586, 703, 775, 906 |
| MboII | GAAGA | 5 cut(s) | 498, 578, 619, 1016, 1259 |
| MfeI | CAATTG | 1 cut(s) | 648 |
| MflI | RGATCY | 1 cut(s) | 906 |
| MhlI | GDGCHC | 3 cut(s) | 245, 509, 1270 |
| MlsI | TGGCCA | 1 cut(s) | 216 |
| MluCI | AATT | 9 cut(s) | 102, 273, 648, 736, 1029, 1280, 1355, 1363, 1368 |
| MluNI | TGGCCA | 1 cut(s) | 216 |
| MlyI | GAGTC | 2 cut(s) | 682, 1196 |
| MmeI | TCCRAC | 1 cut(s) | 640 |
| Mox20I | TGGCCA | 1 cut(s) | 216 |
| Mph1103I | ATGCAT | 1 cut(s) | 694 |
| MroNI | GCCGGC | 1 cut(s) | 634 |
| MscI | TGGCCA | 1 cut(s) | 216 |
| MseI | TTAA | 2 cut(s) | 141, 1372 |
| Msp20I | TGGCCA | 1 cut(s) | 216 |
| MspI | CCGG | 2 cut(s) | 635, 796 |
| MspR9I | CCNGG | 1 cut(s) | 797 |
| MunI | CAATTG | 1 cut(s) | 648 |
| Mva1269I | GAATGC | 4 cut(s) | 636, 694, 791, 853 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 213, 405, 468, 963 |
| NaeI | GCCGGC | 1 cut(s) | 636 |
| NciI | CCSGG | 1 cut(s) | 797 |
| NdeI | CATATG | 1 cut(s) | 413 |
| NdeII | GATC | 4 cut(s) | 586, 703, 775, 906 |
| NgoMIV | GCCGGC | 1 cut(s) | 634 |
| NlaIII | CATG | 7 cut(s) | 193, 323, 533, 593, 943, 1121, 1293 |
| NlaIV | GGNNCC | 3 cut(s) | 421, 422, 840 |
| NmuCI | GTSAC | 1 cut(s) | 48 |
| NsbI | TGCGCA | 1 cut(s) | 731 |
| NsiI | ATGCAT | 1 cut(s) | 694 |
| NspV | TTCGAA | 1 cut(s) | 1002 |
| PctI | GAATGC | 4 cut(s) | 636, 694, 791, 853 |
| PdiI | GCCGGC | 1 cut(s) | 636 |
| PfeI | GAWTC | 5 cut(s) | 167, 251, 266, 428, 494 |
| PfoI | TCCNGGA | 1 cut(s) | 795 |
| PkrI | GCNGC | 5 cut(s) | 333, 348, 410, 559, 1307 |
| PleI | GAGTC | 2 cut(s) | 681, 1195 |
| PpsI | GAGTC | 2 cut(s) | 681, 1195 |
| PpuMI | RGGWCCY | 1 cut(s) | 420 |
| Psp124BI | GAGCTC | 2 cut(s) | 245, 1270 |
| Psp5II | RGGWCCY | 1 cut(s) | 420 |
| PspN4I | GGNNCC | 3 cut(s) | 421, 422, 840 |
| PspPI | GGNCC | 2 cut(s) | 420, 1307 |
| PspPPI | RGGWCCY | 1 cut(s) | 420 |
| PsuI | RGATCY | 1 cut(s) | 906 |
| RsaI | GTAC | 5 cut(s) | 13, 944, 949, 1223, 1351 |
| RsaNI | GTAC | 5 cut(s) | 12, 943, 948, 1222, 1350 |
| SacI | GAGCTC | 2 cut(s) | 245, 1270 |
| SaqAI | TTAA | 2 cut(s) | 141, 1372 |
| SatI | GCNGC | 5 cut(s) | 332, 347, 409, 558, 1306 |
| Sau3AI | GATC | 4 cut(s) | 586, 703, 775, 906 |
| Sau96I | GGNCC | 2 cut(s) | 420, 1307 |
| ScaI | AGTACT | 1 cut(s) | 1351 |
| SchI | GAGTC | 2 cut(s) | 682, 1196 |
| ScrFI | CCNGG | 1 cut(s) | 797 |
| SduI | GDGCHC | 3 cut(s) | 245, 509, 1270 |
| SfaNI | GCATC | 5 cut(s) | 30, 408, 559, 953, 1165 |
| SfuI | TTCGAA | 1 cut(s) | 1002 |
| SinI | GGWCC | 1 cut(s) | 420 |
| SmlI | CTYRAG | 3 cut(s) | 199, 473, 1043 |
| SmoI | CTYRAG | 3 cut(s) | 199, 473, 1043 |
| Sse9I | AATT | 9 cut(s) | 102, 273, 648, 736, 1029, 1280, 1355, 1363, 1368 |
| SsiI | CCGC | 3 cut(s) | 331, 469, 1305 |
| SspMI | CTAG | 6 cut(s) | 81, 540, 747, 786, 902, 1019 |
| SstI | GAGCTC | 2 cut(s) | 245, 1270 |
| StyD4I | CCNGG | 1 cut(s) | 795 |
| StyI | CCWWGG | 1 cut(s) | 677 |
| TaaI | ACNGT | 5 cut(s) | 114, 135, 715, 947, 1226 |
| TaqI | TCGA | 4 cut(s) | 239, 254, 1002, 1270 |
| TasI | AATT | 9 cut(s) | 102, 273, 648, 736, 1029, 1280, 1355, 1363, 1368 |
| TatI | WGTACW | 4 cut(s) | 11, 942, 947, 1349 |
| TauI | GCSGC | 2 cut(s) | 334, 1308 |
| TfiI | GAWTC | 5 cut(s) | 167, 251, 266, 428, 494 |
| Tru1I | TTAA | 2 cut(s) | 141, 1372 |
| Tru9I | TTAA | 2 cut(s) | 141, 1372 |
| TscAI | CASTG | 5 cut(s) | 39, 63, 438, 1177, 1202 |
| TseFI | GTSAC | 1 cut(s) | 48 |
| TseI | GCWGC | 3 cut(s) | 346, 408, 557 |
| Tsp45I | GTSAC | 1 cut(s) | 48 |
| TspDTI | ATGAA | 3 cut(s) | 442, 756, 1260 |
| TspGWI | ACGGA | 1 cut(s) | 1209 |
| TspRI | CASTG | 5 cut(s) | 39, 63, 438, 1177, 1202 |
| VpaK11BI | GGWCC | 1 cut(s) | 420 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1073 |
| XapI | RAATTY | 3 cut(s) | 273, 1029, 1363 |
| XbaI | TCTAGA | 1 cut(s) | 1018 |
| XspI | CTAG | 6 cut(s) | 81, 540, 747, 786, 902, 1019 |
| ZrmI | AGTACT | 1 cut(s) | 1351 |
| Zsp2I | ATGCAT | 1 cut(s) | 694 |