Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0005335

Physical Location & Seq

Genomic Coordinates Forward (+)

35577642 .. 35580912

Gene Structure 3271 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1295100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGAGGAATGAAACTAGTGTCACTTTTTCCATGGATCCACAAAGGCCCCTCAATGTCCAACTAGTTTCATCCACCGACTCGCCCGAGTTCACTTACTTAACTCGGTCTCTGACTCGCTGCAGAATCATTGCGCTCGATGCCGAGTGGAAGCCCATCCGCACCCGCACCCCCCAGTCGTCTTTCCCAACCGTCCTCCTCCTCCAACTCGCCTGTCAACTAGGTTCCCGACTCGGCGGAGACTCGGACGAGTCGGACGACTCAGTCGTCTTCCTGCTCGACCTGTCAACCATTCACCTGCCGTCGATCTGGGAGTTGCTGAGGGACGCATTCGTTTCCCCCGATATTCTGAAACTGGGTTTTCGATTTAAGCAGGATTTGATATACTTGTCCTCCACCTTCAGCTCCAATGGCTGCGAACCTGGGTTCGACAGGGTGGAGCCATTTATGGATATTACGAGCATATACAATCACCTGCAAGACAAGCAACATGGAAGGAAGGCCTCCAAGCAAATCAAGAGTTTAGCAAGTATTTGCAAAGAAGTCCTTGGAATTTCTCTTTCAAAGGAACTCCAATGTAGTGATTGGTCATGTCGTCCTCTTACAGAAGAGCAGAAAACATATGCAGCAATGGACGCACACTGCTTGATTGAGATATTCAATGTCTTCCAAGCCAAAGTCATCAAGGAAGGGAAACTAGTTCGCCATCCCACTGAACCGCATCCCCCAACCGTGACTCTTGGGTTGAAAGTGGTTTTTGAGAAGCTTGATATATATAGTAAGATTGTAAGGATGAAAGTTCATGAAGCTATAGATATAGCCCGAGCTACTGCTTCTTATGTTTCTCCTAATATAGTTACGGAAGAGGGAATGACATTGAGGATAGGGCATAGGAATACCCTTCCCATGGATGAATACCTCTTGAAGGTTGTAAACGAATTTGGGGAGAAAATTTTGTTGAAAGAATCTGACAAAACGGCCAAAACTTCTAAAAGAAAAGCAAAAGGACGGTCATCAGAGGGTTTGATTTGTAATGAAAAGCAAGGACAGAGTTTTGAAGATTGGCAAGGTCCCCCACCATGGGATTTGGCCTTGGGGGGTGATGGACAACCGAAGTTTCTATGCGACGTGATGGTCGAAGGCTTAGCTAAACATTTAAGATGTGTAGGGATCAATGCTGCAATCTCGTATTCAAAAAAGCCTGAACCCAGGCAGTTAATAGATCAAGCAAATAAAGAGAAGAGAGTGCTGTTGACGCGGGATGCCAAGCTGCTGAGACATGATTATCTAATAAACAATCATATCTATAGAGTGAAGAGTCTTCTCAAGAACGAACAGCTACTTGAGATAATCGAAACTTTCCAACTGAAAATTAGTGAGGATCAACTAATGTCAAGATGCACCAAATGCAATGGTAGGTTTATTCAAAAGCCCTTGACGACTGAAGAGGCTGTTGAAGCTGCGAAAGGTTTCCAAAGAATTCCTAACTGCTTGTTTAACAAGAATCTCGAGTTTTGGCAGTGCATGGACTGCAACCAACTTTACTGGGAGGGAACTCAATACCACAATGCAGTCCAGAAGTTCATTGATGTCTGCAAGTTGAATGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DNA_pol_A_exo1 Mut7-C

Protein Analysis

536

Amino Acids

60.99

Weight (kDa)

8.05

Isoelectric Point (pI)

43.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_pol_A_exo1	PF01612	24 - 226	4.5e-22	3'-5' exonuclease
Mut7-C	PF01927	370 - 526	1.5e-39	Mut7-C RNAse domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005335)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24340 AT5G24340
fragaria_vesca	FvH4_7g32160 FvH4_7g32160 FvH4_7g32160 FvH4_7g32160 FvH4_7g32160 FvH4_7g32160
malus_domestica	MD07G1295100.v1.1
prunus_persica	Prupe.2G314700_v2.0.a1
pyrus_communis	pycom07g26770
rosa_chinensis	RchiOBHm_Chr1g0381781
rosa_laevigata	RLG00000026206
rosa_multiflora	Rmu_sc0031098.1_g000001
rosa_roxburghii	Rroxscaffold_4G00278460
rosa_rugosa	Rorug01G0430900
rosa_samantha	Rh1AG454300 Rh1BG411700 Rh1CG425900 Rh1DG009300 Rh1DG443600 Rh2AG143300 Rh2BG148500 Rh3DG348400 Rh4BG131200 Rh5AG031700 Rh5AG441500 Rh5CG034400
rosa_wichuraiana	Rw1G039650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	303, 480
AasI	GACNNNNNNGTC	3 cut(s)	260, 263, 1130
Acc36I	ACCTGC	2 cut(s)	303, 480
AccII	CGCG	1 cut(s)	1255
AciI	CCGC	5 cut(s)	157, 163, 234, 716, 1255
AclWI	GGATC	4 cut(s)	29, 42, 1175, 1386
AcoI	YGGCCR	1 cut(s)	975
AcsI	RAATTY	4 cut(s)	549, 935, 948, 1476
AcuI	CTGAAG	2 cut(s)	382, 1461
AfiI	CCNNNNNNNGG	4 cut(s)	904, 922, 1077, 1078
AhlI	ACTAGT	3 cut(s)	14, 61, 694
AjiI	CACGTC	1 cut(s)	1126
AjnI	CCWGG	2 cut(s)	418, 1205
AluBI	AGCT	8 cut(s)	402, 763, 806, 824, 1145, 1267, 1336, 1457
AluI	AGCT	8 cut(s)	402, 763, 806, 824, 1145, 1267, 1336, 1457
Alw26I	GTCTC	3 cut(s)	111, 231, 1267
AlwI	GGATC	4 cut(s)	29, 42, 1175, 1386
Ama87I	CYCGRG	3 cut(s)	83, 819, 1505
AoxI	GGCC	4 cut(s)	44, 498, 975, 1086
ApeKI	GCWGC	6 cut(s)	117, 411, 623, 1175, 1267, 1457
ApoI	RAATTY	4 cut(s)	549, 935, 948, 1476
ArsI	GACNNNNNNTTYG	2 cut(s)	992, 1024
Asp700I	GAANNNNTTC	1 cut(s)	1466
AspLEI	GCGC	1 cut(s)	133
AspS9I	GGNCC	2 cut(s)	45, 1067
AsuHPI	GGTGA	3 cut(s)	284, 461, 1109
AvaI	CYCGRG	3 cut(s)	83, 819, 1505
AvaII	GGWCC	1 cut(s)	1067
BamHI	GGATCC	1 cut(s)	34
BbsI	GAAGAC	3 cut(s)	259, 655, 1310
BbvCI	CCTCAGC	1 cut(s)	317
BbvI	GCAGC	6 cut(s)	104, 398, 635, 1162, 1254, 1444
BccI	CCATC	4 cut(s)	161, 711, 1094, 1123
BceAI	ACGGC	2 cut(s)	283, 990
BciT130I	CCWGG	2 cut(s)	420, 1207
BcoDI	GTCTC	3 cut(s)	111, 231, 1267
BcuI	ACTAGT	3 cut(s)	14, 61, 694
BfaI	CTAG	4 cut(s)	15, 62, 218, 695
BfmI	CTRYAG	3 cut(s)	118, 807, 1303
BfuAI	ACCTGC	2 cut(s)	303, 480
BisI	GCNGC	6 cut(s)	118, 412, 624, 1176, 1268, 1458
BlpI	GCTNAGC	1 cut(s)	1141
BlsI	GCNGC	6 cut(s)	119, 413, 625, 1177, 1269, 1459
Bme1390I	CCNGG	2 cut(s)	420, 1207
Bme18I	GGWCC	1 cut(s)	1067
BmeT110I	CYCGRG	3 cut(s)	83, 819, 1505
BmgBI	CACGTC	1 cut(s)	1126
BmgT120I	GGNCC	2 cut(s)	45, 1067
BmiI	GGNNCC	5 cut(s)	36, 47, 223, 438, 1069
BmrFI	CCNGG	2 cut(s)	420, 1207
BmrI	ACTGGG	3 cut(s)	166, 362, 1552
BmsI	GCATC	4 cut(s)	127, 727, 1249, 1385
BmuI	ACTGGG	3 cut(s)	166, 362, 1552
BpiI	GAAGAC	3 cut(s)	259, 655, 1310
Bpu10I	CCTNAGC	1 cut(s)	317
Bpu1102I	GCTNAGC	1 cut(s)	1141
BpuEI	CTTGAG	2 cut(s)	1307, 1361
BsaI	GGTCTC	1 cut(s)	111
BsaJI	CCNNGG	7 cut(s)	30, 419, 544, 903, 1076, 1089, 1205
BsaXI	ACNNNNNCTCC	2 cut(s)	374, 404
Bsc4I	CCNNNNNNNGG	4 cut(s)	904, 922, 1077, 1078
Bse1I	ACTGG	3 cut(s)	172, 357, 1547
Bse3DI	GCAATG	3 cut(s)	126, 633, 1414
BseBI	CCWGG	2 cut(s)	420, 1207
BseDI	CCNNGG	7 cut(s)	30, 419, 544, 903, 1076, 1089, 1205
BseGI	GGATG	7 cut(s)	68, 153, 703, 718, 795, 913, 1264
BseLI	CCNNNNNNNGG	4 cut(s)	904, 922, 1077, 1078
BseMI	GCAATG	3 cut(s)	126, 633, 1414
BseMII	CTCAG	3 cut(s)	273, 308, 1262
BseNI	ACTGG	3 cut(s)	172, 357, 1547
BseRI	GAGGAG	2 cut(s)	185, 188
BseXI	GCAGC	6 cut(s)	104, 398, 635, 1162, 1254, 1444
Bsh1236I	CGCG	1 cut(s)	1255
BshFI	GGCC	4 cut(s)	46, 500, 977, 1088
BsiHKCI	CYCGRG	3 cut(s)	83, 819, 1505
BslFI	GGGAC	2 cut(s)	335, 1053
BslI	CCNNNNNNNGG	4 cut(s)	904, 922, 1077, 1078
BsmAI	GTCTC	3 cut(s)	111, 231, 1267
BsmFI	GGGAC	2 cut(s)	335, 1053
BsmI	GAATGC	1 cut(s)	326
BsnI	GGCC	4 cut(s)	46, 500, 977, 1088
Bso31I	GGTCTC	1 cut(s)	111
BsoBI	CYCGRG	3 cut(s)	83, 819, 1505
Bsp143I	GATC	5 cut(s)	34, 303, 1167, 1219, 1378
Bsp1720I	GCTNAGC	1 cut(s)	1141
Bsp19I	CCATGG	3 cut(s)	30, 903, 1076
BspACI	CCGC	5 cut(s)	157, 163, 234, 716, 1255
BspANI	GGCC	4 cut(s)	46, 500, 977, 1088
BspCNI	CTCAG	3 cut(s)	272, 309, 1263
BspFNI	CGCG	1 cut(s)	1255
BspHI	TCATGA	1 cut(s)	799
BspLI	GGNNCC	5 cut(s)	36, 47, 223, 438, 1069
BspMAI	CTGCAG	1 cut(s)	122
BspMI	ACCTGC	2 cut(s)	303, 480
BspPI	GGATC	4 cut(s)	29, 42, 1175, 1386
BspQI	GCTCTTC	1 cut(s)	600
BspTNI	GGTCTC	1 cut(s)	111
BsrDI	GCAATG	3 cut(s)	126, 633, 1414
BsrI	ACTGG	3 cut(s)	172, 357, 1547
BssECI	CCNNGG	7 cut(s)	30, 419, 544, 903, 1076, 1089, 1205
BssMI	GATC	5 cut(s)	34, 303, 1167, 1219, 1378
BssT1I	CCWWGG	5 cut(s)	30, 544, 903, 1076, 1089
Bst2UI	CCWGG	2 cut(s)	420, 1207
Bst4CI	ACNGT	3 cut(s)	190, 730, 1008
Bst6I	CTCTTC	5 cut(s)	600, 855, 1232, 1307, 1437
BstAPI	GCANNNNNTGC	2 cut(s)	1404, 1527
BstDEI	CTNAG	4 cut(s)	259, 317, 1141, 1271
BstDSI	CCRYGG	3 cut(s)	30, 903, 1076
BstENI	CCTNNNNNAGG	1 cut(s)	920
BstF5I	GGATG	7 cut(s)	68, 153, 703, 718, 795, 913, 1264
BstFNI	CGCG	1 cut(s)	1255
BstHHI	GCGC	1 cut(s)	133
BstKTI	GATC	5 cut(s)	37, 306, 1170, 1222, 1381
BstMAI	GTCTC	3 cut(s)	111, 231, 1267
BstMBI	GATC	5 cut(s)	34, 303, 1167, 1219, 1378
BstMWI	GCNNNNNNNGC	8 cut(s)	137, 408, 481, 632, 1252, 1404, 1454, 1527
BstNI	CCWGG	2 cut(s)	420, 1207
BstSCI	CCNGG	2 cut(s)	418, 1205
BstSFI	CTRYAG	3 cut(s)	118, 807, 1303
BstUI	CGCG	1 cut(s)	1255
BstV1I	GCAGC	6 cut(s)	104, 398, 635, 1162, 1254, 1444
BstV2I	GAAGAC	3 cut(s)	259, 655, 1310
BstX2I	RGATCY	1 cut(s)	34
BstYI	RGATCY	1 cut(s)	34
BsuRI	GGCC	4 cut(s)	46, 500, 977, 1088
BtgI	CCRYGG	3 cut(s)	30, 903, 1076
BtrI	CACGTC	1 cut(s)	1126
BtsCI	GGATG	7 cut(s)	68, 153, 703, 718, 795, 913, 1264
BtsI	GCAGTG	2 cut(s)	637, 1523
BtsIMutI	CAGTG	3 cut(s)	637, 708, 1523
BveI	ACCTGC	2 cut(s)	303, 480
CciI	TCATGA	1 cut(s)	799
CfoI	GCGC	1 cut(s)	133
Cfr13I	GGNCC	2 cut(s)	45, 1067
CseI	GACGC	3 cut(s)	332, 641, 1261
CviAII	CATG	8 cut(s)	31, 488, 588, 800, 904, 1077, 1277, 1522
DdeI	CTNAG	4 cut(s)	259, 317, 1141, 1271
DpnI	GATC	5 cut(s)	36, 305, 1169, 1221, 1380
DpnII	GATC	5 cut(s)	34, 303, 1167, 1219, 1378
DrdI	GACNNNNNNGTC	3 cut(s)	260, 263, 1130
DseDI	GACNNNNNNGTC	3 cut(s)	260, 263, 1130
EaeI	YGGCCR	1 cut(s)	975
Eam1104I	CTCTTC	5 cut(s)	600, 855, 1232, 1307, 1437
EarI	CTCTTC	5 cut(s)	600, 855, 1232, 1307, 1437
EciI	GGCGGA	1 cut(s)	249
Eco130I	CCWWGG	5 cut(s)	30, 544, 903, 1076, 1089
Eco147I	AGGCCT	1 cut(s)	500
Eco31I	GGTCTC	1 cut(s)	111
Eco47I	GGWCC	1 cut(s)	1067
Eco57I	CTGAAG	2 cut(s)	382, 1461
Eco88I	CYCGRG	3 cut(s)	83, 819, 1505
EcoNI	CCTNNNNNAGG	1 cut(s)	920
EcoO109I	RGGNCCY	2 cut(s)	45, 1067
EcoRI	GAATTC	1 cut(s)	1476
EcoRII	CCWGG	2 cut(s)	418, 1205
EcoT14I	CCWWGG	5 cut(s)	30, 544, 903, 1076, 1089
ErhI	CCWWGG	5 cut(s)	30, 544, 903, 1076, 1089
FaeI	CATG	8 cut(s)	34, 491, 591, 803, 907, 1080, 1280, 1525
FalI	AAGNNNNNCTT	2 cut(s)	528, 560
FaqI	GGGAC	2 cut(s)	335, 1053
FatI	CATG	8 cut(s)	30, 487, 587, 799, 903, 1076, 1276, 1521
FauI	CCCGC	2 cut(s)	170, 1248
FauNDI	CATATG	1 cut(s)	619
Fnu4HI	GCNGC	6 cut(s)	118, 412, 624, 1176, 1268, 1458
FokI	GGATG	7 cut(s)	55, 140, 690, 705, 802, 920, 1271
Fsp4HI	GCNGC	6 cut(s)	118, 412, 624, 1176, 1268, 1458
FspBI	CTAG	4 cut(s)	15, 62, 218, 695
GlaI	GCGC	1 cut(s)	132
GluI	GCNGC	6 cut(s)	118, 412, 624, 1176, 1268, 1458
HaeIII	GGCC	4 cut(s)	46, 500, 977, 1088
HgaI	GACGC	3 cut(s)	332, 641, 1261
HhaI	GCGC	1 cut(s)	133
Hin1II	CATG	8 cut(s)	34, 491, 591, 803, 907, 1080, 1280, 1525
Hin6I	GCGC	1 cut(s)	131
HinP1I	GCGC	1 cut(s)	131
HincII	GTYRAC	3 cut(s)	215, 285, 1251
HindII	GTYRAC	3 cut(s)	215, 285, 1251
HindIII	AAGCTT	1 cut(s)	761
HphI	GGTGA	3 cut(s)	284, 461, 1109
Hpy166II	GTNNAC	5 cut(s)	90, 215, 285, 931, 1251
Hpy188I	TCNGA	6 cut(s)	111, 244, 253, 348, 967, 1015
Hpy188III	TCNNGA	8 cut(s)	225, 514, 800, 919, 1324, 1392, 1505, 1573
Hpy8I	GTNNAC	5 cut(s)	90, 215, 285, 931, 1251
Hpy99I	CGWCG	2 cut(s)	304, 1127
HpyAV	CCTTC	7 cut(s)	406, 486, 490, 680, 908, 916, 1130
HpyCH4III	ACNGT	3 cut(s)	190, 730, 1008
HpyCH4IV	ACGT	1 cut(s)	1125
HpyF10VI	GCNNNNNNNGC	8 cut(s)	137, 408, 481, 632, 1252, 1404, 1454, 1527
HpyF3I	CTNAG	4 cut(s)	259, 317, 1141, 1271
HpySE526I	ACGT	1 cut(s)	1125
Hsp92II	CATG	8 cut(s)	34, 491, 591, 803, 907, 1080, 1280, 1525
HspAI	GCGC	1 cut(s)	131
Kzo9I	GATC	5 cut(s)	34, 303, 1167, 1219, 1378
LguI	GCTCTTC	1 cut(s)	600
LmnI	GCTCC	2 cut(s)	407, 436
Lsp1109I	GCAGC	6 cut(s)	104, 398, 635, 1162, 1254, 1444
LweI	GCATC	4 cut(s)	127, 727, 1249, 1385
MaeI	CTAG	4 cut(s)	15, 62, 218, 695
MaeII	ACGT	1 cut(s)	1125
MaeIII	GTNAC	3 cut(s)	19, 730, 853
MalI	GATC	5 cut(s)	36, 305, 1169, 1221, 1380
MboI	GATC	5 cut(s)	34, 303, 1167, 1219, 1378
MboII	GAAGA	9 cut(s)	259, 617, 655, 872, 1067, 1249, 1310, 1324, 1454
MflI	RGATCY	1 cut(s)	34
MluCI	AATT	5 cut(s)	549, 935, 948, 1368, 1476
MlyI	GAGTC	8 cut(s)	71, 106, 222, 233, 251, 257, 727, 1324
MmeI	TCCRAC	4 cut(s)	82, 226, 231, 1384
MroXI	GAANNNNTTC	1 cut(s)	1466
MseI	TTAA	5 cut(s)	98, 366, 1154, 1214, 1494
MspR9I	CCNGG	2 cut(s)	420, 1207
Mva1269I	GAATGC	1 cut(s)	326
MvaI	CCWGG	2 cut(s)	420, 1207
MvnI	CGCG	1 cut(s)	1255
MwoI	GCNNNNNNNGC	8 cut(s)	137, 408, 481, 632, 1252, 1404, 1454, 1527
NcoI	CCATGG	3 cut(s)	30, 903, 1076
NdeI	CATATG	1 cut(s)	619
NdeII	GATC	5 cut(s)	34, 303, 1167, 1219, 1378
NlaIII	CATG	8 cut(s)	34, 491, 591, 803, 907, 1080, 1280, 1525
NlaIV	GGNNCC	5 cut(s)	36, 47, 223, 438, 1069
NmeAIII	GCCGAG	2 cut(s)	166, 210
NmuCI	GTSAC	2 cut(s)	19, 730
PaeR7I	CTCGAG	1 cut(s)	1505
PagI	TCATGA	1 cut(s)	799
PaqCI	CACCTGC	2 cut(s)	303, 480
PceI	AGGCCT	1 cut(s)	500
PciSI	GCTCTTC	1 cut(s)	600
PcsI	WCGNNNNNNNCGW	4 cut(s)	252, 261, 336, 1131
PctI	GAATGC	1 cut(s)	326
PdmI	GAANNNNTTC	1 cut(s)	1466
PfeI	GAWTC	3 cut(s)	123, 962, 1501
PflFI	GACNNNGTC	1 cut(s)	260
PkrI	GCNGC	6 cut(s)	119, 413, 625, 1177, 1269, 1459
PleI	GAGTC	8 cut(s)	71, 106, 222, 233, 251, 256, 727, 1323
PpsI	GAGTC	8 cut(s)	71, 106, 222, 233, 251, 256, 727, 1323
PpuMI	RGGWCCY	1 cut(s)	1067
Psp5II	RGGWCCY	1 cut(s)	1067
Psp6I	CCWGG	2 cut(s)	418, 1205
PspGI	CCWGG	2 cut(s)	418, 1205
PspN4I	GGNNCC	5 cut(s)	36, 47, 223, 438, 1069
PspPI	GGNCC	2 cut(s)	45, 1067
PspPPI	RGGWCCY	1 cut(s)	1067
PstI	CTGCAG	1 cut(s)	122
PsuI	RGATCY	1 cut(s)	34
PsyI	GACNNNGTC	1 cut(s)	260
SapI	GCTCTTC	1 cut(s)	600
SaqAI	TTAA	5 cut(s)	98, 366, 1154, 1214, 1494
SatI	GCNGC	6 cut(s)	118, 412, 624, 1176, 1268, 1458
Sau3AI	GATC	5 cut(s)	34, 303, 1167, 1219, 1378
Sau96I	GGNCC	2 cut(s)	45, 1067
SchI	GAGTC	8 cut(s)	71, 106, 222, 233, 251, 257, 727, 1324
ScrFI	CCNGG	2 cut(s)	420, 1207
SfaNI	GCATC	4 cut(s)	127, 727, 1249, 1385
SfcI	CTRYAG	3 cut(s)	118, 807, 1303
Sfr274I	CTCGAG	1 cut(s)	1505
SinI	GGWCC	1 cut(s)	1067
SlaI	CTCGAG	1 cut(s)	1505
SmlI	CTYRAG	3 cut(s)	1322, 1340, 1505
SmoI	CTYRAG	3 cut(s)	1322, 1340, 1505
SpeI	ACTAGT	3 cut(s)	14, 61, 694
Sse9I	AATT	5 cut(s)	549, 935, 948, 1368, 1476
SseBI	AGGCCT	1 cut(s)	500
SsiI	CCGC	5 cut(s)	157, 163, 234, 716, 1255
SspMI	CTAG	4 cut(s)	15, 62, 218, 695
StuI	AGGCCT	1 cut(s)	500
StyD4I	CCNGG	2 cut(s)	418, 1205
StyI	CCWWGG	5 cut(s)	30, 544, 903, 1076, 1089
TaaI	ACNGT	3 cut(s)	190, 730, 1008
TaiI	ACGT	1 cut(s)	1128
TaqI	TCGA	8 cut(s)	135, 276, 302, 361, 426, 1134, 1350, 1506
TaqII	GACCGA	1 cut(s)	93
TasI	AATT	5 cut(s)	549, 935, 948, 1368, 1476
TfiI	GAWTC	3 cut(s)	123, 962, 1501
Tru1I	TTAA	5 cut(s)	98, 366, 1154, 1214, 1494
Tru9I	TTAA	5 cut(s)	98, 366, 1154, 1214, 1494
TscAI	CASTG	3 cut(s)	644, 715, 1523
TseFI	GTSAC	2 cut(s)	19, 730
TseI	GCWGC	6 cut(s)	117, 411, 623, 1175, 1267, 1457
Tsp45I	GTSAC	2 cut(s)	19, 730
TspDTI	ATGAA	8 cut(s)	24, 57, 788, 806, 816, 924, 1047, 1570
TspGWI	ACGGA	1 cut(s)	872
TspRI	CASTG	3 cut(s)	644, 715, 1523
Tth111I	GACNNNGTC	1 cut(s)	260
VpaK11BI	GGWCC	1 cut(s)	1067
XagI	CCTNNNNNAGG	1 cut(s)	920
XapI	RAATTY	4 cut(s)	549, 935, 948, 1476
XhoI	CTCGAG	1 cut(s)	1505
XmnI	GAANNNNTTC	1 cut(s)	1466
XspI	CTAG	4 cut(s)	15, 62, 218, 695

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.