Exonuclease mut-7 homolog
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G24340 AT5G24340 |
| fragaria_vesca | FvH4_7g32160 FvH4_7g32160 FvH4_7g32160 FvH4_7g32160 FvH4_7g32160 FvH4_7g32160 |
| malus_domestica | MD07G1295100.v1.1 |
| prunus_persica | Prupe.2G314700_v2.0.a1 |
| pyrus_communis | pycom07g26770 |
| rosa_chinensis | RchiOBHm_Chr1g0381781 |
| rosa_laevigata | RLG00000026206 |
| rosa_multiflora | Rmu_sc0031098.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00278460 |
| rosa_rugosa | Rorug01G0430900 |
| rosa_samantha | Rh1AG454300 Rh1BG411700 Rh1CG425900 Rh1DG009300 Rh1DG443600 Rh2AG143300 Rh2BG148500 Rh3DG348400 Rh4BG131200 Rh5AG031700 Rh5AG441500 Rh5CG034400 |
| rosa_wichuraiana | Rw1G039650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 459 |
| AasI | GACNNNNNNGTC | 3 cut(s) | 239, 242, 1109 |
| Acc36I | ACCTGC | 1 cut(s) | 459 |
| AccII | CGCG | 1 cut(s) | 1234 |
| AciI | CCGC | 5 cut(s) | 127, 133, 142, 213, 1234 |
| AclWI | GGATC | 3 cut(s) | 12, 1154, 1365 |
| AcoI | YGGCCR | 1 cut(s) | 954 |
| AcsI | RAATTY | 3 cut(s) | 528, 927, 1455 |
| AcuI | CTGAAG | 2 cut(s) | 361, 1440 |
| AfaI | GTAC | 1 cut(s) | 443 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 883, 901, 1056, 1057 |
| AgsI | TTSAA | 9 cut(s) | 637, 724, 901, 937, 1034, 1170, 1403, 1433, 1579 |
| AhlI | ACTAGT | 2 cut(s) | 31, 673 |
| AjiI | CACGTC | 1 cut(s) | 1105 |
| AjnI | CCWGG | 2 cut(s) | 397, 1184 |
| Alw26I | GTCTC | 3 cut(s) | 81, 210, 1246 |
| AlwI | GGATC | 3 cut(s) | 12, 1154, 1365 |
| Ama87I | CYCGRG | 2 cut(s) | 53, 798 |
| AoxI | GGCC | 5 cut(s) | 14, 139, 477, 954, 1065 |
| ApeKI | GCWGC | 7 cut(s) | 390, 454, 602, 1154, 1189, 1246, 1436 |
| ApoI | RAATTY | 3 cut(s) | 528, 927, 1455 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 971, 1003 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1445 |
| AspLEI | GCGC | 1 cut(s) | 103 |
| AspS9I | GGNCC | 3 cut(s) | 15, 139, 1046 |
| AsuHPI | GGTGA | 3 cut(s) | 440, 1088, 1300 |
| AvaI | CYCGRG | 2 cut(s) | 53, 798 |
| AvaII | GGWCC | 1 cut(s) | 1046 |
| BamHI | GGATCC | 1 cut(s) | 4 |
| BbsI | GAAGAC | 3 cut(s) | 238, 634, 1289 |
| BbvI | GCAGC | 7 cut(s) | 377, 466, 614, 1141, 1201, 1233, 1423 |
| BccI | CCATC | 4 cut(s) | 131, 690, 1073, 1102 |
| BceAI | ACGGC | 2 cut(s) | 262, 969 |
| BciT130I | CCWGG | 2 cut(s) | 399, 1186 |
| BcoDI | GTCTC | 3 cut(s) | 81, 210, 1246 |
| BcuI | ACTAGT | 2 cut(s) | 31, 673 |
| BfaI | CTAG | 4 cut(s) | 32, 197, 674, 1484 |
| BfmI | CTRYAG | 3 cut(s) | 452, 786, 1282 |
| BfuAI | ACCTGC | 1 cut(s) | 459 |
| BglII | AGATCT | 1 cut(s) | 1278 |
| BisI | GCNGC | 8 cut(s) | 142, 391, 455, 603, 1155, 1190, 1247, 1437 |
| BlpI | GCTNAGC | 1 cut(s) | 1120 |
| BlsI | GCNGC | 8 cut(s) | 143, 392, 456, 604, 1156, 1191, 1248, 1438 |
| Bme1390I | CCNGG | 2 cut(s) | 399, 1186 |
| Bme18I | GGWCC | 1 cut(s) | 1046 |
| BmeT110I | CYCGRG | 2 cut(s) | 53, 798 |
| BmgBI | CACGTC | 1 cut(s) | 1105 |
| BmgT120I | GGNCC | 3 cut(s) | 15, 139, 1046 |
| BmiI | GGNNCC | 5 cut(s) | 6, 17, 202, 417, 1048 |
| BmrFI | CCNGG | 2 cut(s) | 399, 1186 |
| BmrI | ACTGGG | 2 cut(s) | 341, 1531 |
| BmsI | GCATC | 4 cut(s) | 97, 601, 1228, 1364 |
| BmuI | ACTGGG | 2 cut(s) | 341, 1531 |
| BpiI | GAAGAC | 3 cut(s) | 238, 634, 1289 |
| BpmI | CTGGAG | 1 cut(s) | 73 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1120 |
| BpuEI | CTTGAG | 2 cut(s) | 1286, 1340 |
| BsaI | GGTCTC | 1 cut(s) | 81 |
| BsaJI | CCNNGG | 6 cut(s) | 398, 523, 882, 1055, 1068, 1184 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 353, 383 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 883, 901, 1056, 1057 |
| Bse1I | ACTGG | 2 cut(s) | 336, 1526 |
| Bse3DI | GCAATG | 3 cut(s) | 96, 612, 1393 |
| BseBI | CCWGG | 2 cut(s) | 399, 1186 |
| BseDI | CCNNGG | 6 cut(s) | 398, 523, 882, 1055, 1068, 1184 |
| BseGI | GGATG | 8 cut(s) | 38, 123, 616, 682, 697, 774, 892, 1243 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 883, 901, 1056, 1057 |
| BseMI | GCAATG | 3 cut(s) | 96, 612, 1393 |
| BseMII | CTCAG | 2 cut(s) | 252, 1241 |
| BseNI | ACTGG | 2 cut(s) | 336, 1526 |
| BseRI | GAGGAG | 2 cut(s) | 164, 167 |
| BseXI | GCAGC | 7 cut(s) | 377, 466, 614, 1141, 1201, 1233, 1423 |
| Bsh1236I | CGCG | 1 cut(s) | 1234 |
| Bsh1285I | CGRYCG | 1 cut(s) | 168 |
| BshFI | GGCC | 5 cut(s) | 16, 141, 479, 956, 1067 |
| BsiEI | CGRYCG | 1 cut(s) | 168 |
| BsiHKCI | CYCGRG | 2 cut(s) | 53, 798 |
| BslFI | GGGAC | 2 cut(s) | 314, 1032 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 883, 901, 1056, 1057 |
| BsmAI | GTCTC | 3 cut(s) | 81, 210, 1246 |
| BsmFI | GGGAC | 2 cut(s) | 314, 1032 |
| BsmI | GAATGC | 1 cut(s) | 305 |
| BsnI | GGCC | 5 cut(s) | 16, 141, 479, 956, 1067 |
| Bso31I | GGTCTC | 1 cut(s) | 81 |
| BsoBI | CYCGRG | 2 cut(s) | 53, 798 |
| Bsp1407I | TGTACA | 1 cut(s) | 441 |
| Bsp143I | GATC | 5 cut(s) | 4, 1146, 1198, 1278, 1357 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1120 |
| Bsp19I | CCATGG | 2 cut(s) | 882, 1055 |
| BspACI | CCGC | 5 cut(s) | 127, 133, 142, 213, 1234 |
| BspANI | GGCC | 5 cut(s) | 16, 141, 479, 956, 1067 |
| BspCNI | CTCAG | 2 cut(s) | 251, 1242 |
| BspFNI | CGCG | 1 cut(s) | 1234 |
| BspHI | TCATGA | 1 cut(s) | 778 |
| BspLI | GGNNCC | 5 cut(s) | 6, 17, 202, 417, 1048 |
| BspMAI | CTGCAG | 1 cut(s) | 456 |
| BspMI | ACCTGC | 1 cut(s) | 459 |
| BspPI | GGATC | 3 cut(s) | 12, 1154, 1365 |
| BspQI | GCTCTTC | 1 cut(s) | 579 |
| BspTNI | GGTCTC | 1 cut(s) | 81 |
| BsrDI | GCAATG | 3 cut(s) | 96, 612, 1393 |
| BsrGI | TGTACA | 1 cut(s) | 441 |
| BsrI | ACTGG | 2 cut(s) | 336, 1526 |
| BssECI | CCNNGG | 6 cut(s) | 398, 523, 882, 1055, 1068, 1184 |
| BssMI | GATC | 5 cut(s) | 4, 1146, 1198, 1278, 1357 |
| BssT1I | CCWWGG | 4 cut(s) | 523, 882, 1055, 1068 |
| Bst2UI | CCWGG | 2 cut(s) | 399, 1186 |
| Bst4CI | ACNGT | 4 cut(s) | 153, 169, 709, 987 |
| Bst6I | CTCTTC | 5 cut(s) | 579, 834, 1211, 1286, 1416 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 611, 1383, 1506 |
| BstAUI | TGTACA | 1 cut(s) | 441 |
| BstDEI | CTNAG | 3 cut(s) | 238, 1120, 1250 |
| BstDSI | CCRYGG | 2 cut(s) | 882, 1055 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 899 |
| BstF5I | GGATG | 8 cut(s) | 38, 123, 616, 682, 697, 774, 892, 1243 |
| BstFNI | CGCG | 1 cut(s) | 1234 |
| BstHHI | GCGC | 1 cut(s) | 103 |
| BstKTI | GATC | 5 cut(s) | 7, 1149, 1201, 1281, 1360 |
| BstMAI | GTCTC | 3 cut(s) | 81, 210, 1246 |
| BstMBI | GATC | 5 cut(s) | 4, 1146, 1198, 1278, 1357 |
| BstMCI | CGRYCG | 1 cut(s) | 168 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 107, 141, 387, 460, 611, 1231, 1383, 1433, 1506 |
| BstNI | CCWGG | 2 cut(s) | 399, 1186 |
| BstNSI | RCATGY | 1 cut(s) | 442 |
| BstSCI | CCNGG | 2 cut(s) | 397, 1184 |
| BstSFI | CTRYAG | 3 cut(s) | 452, 786, 1282 |
| BstUI | CGCG | 1 cut(s) | 1234 |
| BstV1I | GCAGC | 7 cut(s) | 377, 466, 614, 1141, 1201, 1233, 1423 |
| BstV2I | GAAGAC | 3 cut(s) | 238, 634, 1289 |
| BstX2I | RGATCY | 2 cut(s) | 4, 1278 |
| BstYI | RGATCY | 2 cut(s) | 4, 1278 |
| BsuRI | GGCC | 5 cut(s) | 16, 141, 479, 956, 1067 |
| BtgI | CCRYGG | 2 cut(s) | 882, 1055 |
| BtrI | CACGTC | 1 cut(s) | 1105 |
| BtsCI | GGATG | 8 cut(s) | 38, 123, 616, 682, 697, 774, 892, 1243 |
| BtsI | GCAGTG | 2 cut(s) | 616, 1502 |
| BtsIMutI | CAGTG | 4 cut(s) | 616, 687, 1416, 1502 |
| BveI | ACCTGC | 1 cut(s) | 459 |
| CciI | TCATGA | 1 cut(s) | 778 |
| CfoI | GCGC | 1 cut(s) | 103 |
| Cfr13I | GGNCC | 3 cut(s) | 15, 139, 1046 |
| CseI | GACGC | 2 cut(s) | 311, 1240 |
| Csp6I | GTAC | 1 cut(s) | 442 |
| CviAII | CATG | 8 cut(s) | 439, 467, 567, 779, 883, 1056, 1256, 1501 |
| CviQI | GTAC | 1 cut(s) | 442 |
| DdeI | CTNAG | 3 cut(s) | 238, 1120, 1250 |
| DpnI | GATC | 5 cut(s) | 6, 1148, 1200, 1280, 1359 |
| DpnII | GATC | 5 cut(s) | 4, 1146, 1198, 1278, 1357 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 239, 242, 1109 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 239, 242, 1109 |
| EaeI | YGGCCR | 1 cut(s) | 954 |
| Eam1104I | CTCTTC | 5 cut(s) | 579, 834, 1211, 1286, 1416 |
| EarI | CTCTTC | 5 cut(s) | 579, 834, 1211, 1286, 1416 |
| EciI | GGCGGA | 1 cut(s) | 228 |
| Eco130I | CCWWGG | 4 cut(s) | 523, 882, 1055, 1068 |
| Eco147I | AGGCCT | 1 cut(s) | 479 |
| Eco31I | GGTCTC | 1 cut(s) | 81 |
| Eco47I | GGWCC | 1 cut(s) | 1046 |
| Eco57I | CTGAAG | 2 cut(s) | 361, 1440 |
| Eco88I | CYCGRG | 2 cut(s) | 53, 798 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 899 |
| EcoO109I | RGGNCCY | 2 cut(s) | 15, 1046 |
| EcoRI | GAATTC | 1 cut(s) | 1455 |
| EcoRII | CCWGG | 2 cut(s) | 397, 1184 |
| EcoT14I | CCWWGG | 4 cut(s) | 523, 882, 1055, 1068 |
| ErhI | CCWWGG | 4 cut(s) | 523, 882, 1055, 1068 |
| FaeI | CATG | 8 cut(s) | 442, 470, 570, 782, 886, 1059, 1259, 1504 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 507, 539 |
| FaqI | GGGAC | 2 cut(s) | 314, 1032 |
| FatI | CATG | 8 cut(s) | 438, 466, 566, 778, 882, 1055, 1255, 1500 |
| FauI | CCCGC | 2 cut(s) | 140, 1227 |
| FauNDI | CATATG | 1 cut(s) | 598 |
| Fnu4HI | GCNGC | 8 cut(s) | 142, 391, 455, 603, 1155, 1190, 1247, 1437 |
| FokI | GGATG | 8 cut(s) | 25, 110, 623, 669, 684, 781, 899, 1250 |
| Fsp4HI | GCNGC | 8 cut(s) | 142, 391, 455, 603, 1155, 1190, 1247, 1437 |
| FspBI | CTAG | 4 cut(s) | 32, 197, 674, 1484 |
| GlaI | GCGC | 1 cut(s) | 102 |
| GluI | GCNGC | 8 cut(s) | 142, 391, 455, 603, 1155, 1190, 1247, 1437 |
| GsuI | CTGGAG | 1 cut(s) | 73 |
| HaeIII | GGCC | 5 cut(s) | 16, 141, 479, 956, 1067 |
| HgaI | GACGC | 2 cut(s) | 311, 1240 |
| HhaI | GCGC | 1 cut(s) | 103 |
| Hin1II | CATG | 8 cut(s) | 442, 470, 570, 782, 886, 1059, 1259, 1504 |
| Hin6I | GCGC | 1 cut(s) | 101 |
| HinP1I | GCGC | 1 cut(s) | 101 |
| HincII | GTYRAC | 3 cut(s) | 194, 264, 1230 |
| HindII | GTYRAC | 3 cut(s) | 194, 264, 1230 |
| HindIII | AAGCTT | 1 cut(s) | 740 |
| HphI | GGTGA | 3 cut(s) | 440, 1088, 1300 |
| Hpy166II | GTNNAC | 5 cut(s) | 60, 194, 264, 910, 1230 |
| Hpy188I | TCNGA | 7 cut(s) | 81, 223, 232, 327, 946, 994, 1278 |
| Hpy8I | GTNNAC | 5 cut(s) | 60, 194, 264, 910, 1230 |
| Hpy99I | CGWCG | 1 cut(s) | 283 |
| HpyAV | CCTTC | 7 cut(s) | 385, 465, 469, 659, 887, 895, 1109 |
| HpyCH4III | ACNGT | 4 cut(s) | 153, 169, 709, 987 |
| HpyCH4IV | ACGT | 1 cut(s) | 1104 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 107, 141, 387, 460, 611, 1231, 1383, 1433, 1506 |
| HpyF3I | CTNAG | 3 cut(s) | 238, 1120, 1250 |
| HpySE526I | ACGT | 1 cut(s) | 1104 |
| Hsp92II | CATG | 8 cut(s) | 442, 470, 570, 782, 886, 1059, 1259, 1504 |
| HspAI | GCGC | 1 cut(s) | 101 |
| Kzo9I | GATC | 5 cut(s) | 4, 1146, 1198, 1278, 1357 |
| LguI | GCTCTTC | 1 cut(s) | 579 |
| LmnI | GCTCC | 3 cut(s) | 92, 386, 415 |
| Lsp1109I | GCAGC | 7 cut(s) | 377, 466, 614, 1141, 1201, 1233, 1423 |
| LweI | GCATC | 4 cut(s) | 97, 601, 1228, 1364 |
| MaeI | CTAG | 4 cut(s) | 32, 197, 674, 1484 |
| MaeII | ACGT | 1 cut(s) | 1104 |
| MaeIII | GTNAC | 3 cut(s) | 709, 832, 1100 |
| MalI | GATC | 5 cut(s) | 6, 1148, 1200, 1280, 1359 |
| MboI | GATC | 5 cut(s) | 4, 1146, 1198, 1278, 1357 |
| MboII | GAAGA | 9 cut(s) | 238, 596, 634, 851, 1046, 1228, 1289, 1303, 1433 |
| MflI | RGATCY | 2 cut(s) | 4, 1278 |
| MluCI | AATT | 5 cut(s) | 528, 759, 927, 1347, 1455 |
| MlyI | GAGTC | 8 cut(s) | 41, 76, 201, 212, 230, 236, 706, 1303 |
| MmeI | TCCRAC | 4 cut(s) | 52, 205, 210, 1363 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1445 |
| MseI | TTAA | 5 cut(s) | 21, 68, 345, 1133, 1473 |
| MspR9I | CCNGG | 2 cut(s) | 399, 1186 |
| Mva1269I | GAATGC | 1 cut(s) | 305 |
| MvaI | CCWGG | 2 cut(s) | 399, 1186 |
| MvnI | CGCG | 1 cut(s) | 1234 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 107, 141, 387, 460, 611, 1231, 1383, 1433, 1506 |
| NcoI | CCATGG | 2 cut(s) | 882, 1055 |
| NdeI | CATATG | 1 cut(s) | 598 |
| NdeII | GATC | 5 cut(s) | 4, 1146, 1198, 1278, 1357 |
| NlaIII | CATG | 8 cut(s) | 442, 470, 570, 782, 886, 1059, 1259, 1504 |
| NlaIV | GGNNCC | 5 cut(s) | 6, 17, 202, 417, 1048 |
| NmeAIII | GCCGAG | 2 cut(s) | 136, 189 |
| NmuCI | GTSAC | 2 cut(s) | 709, 1100 |
| NspI | RCATGY | 1 cut(s) | 442 |
| PagI | TCATGA | 1 cut(s) | 778 |
| PaqCI | CACCTGC | 1 cut(s) | 459 |
| PceI | AGGCCT | 1 cut(s) | 479 |
| PciSI | GCTCTTC | 1 cut(s) | 579 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 161, 231, 240, 315, 1110 |
| PctI | GAATGC | 1 cut(s) | 305 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1445 |
| PfeI | GAWTC | 3 cut(s) | 93, 941, 1480 |
| PflFI | GACNNNGTC | 1 cut(s) | 239 |
| PkrI | GCNGC | 8 cut(s) | 143, 392, 456, 604, 1156, 1191, 1248, 1438 |
| PleI | GAGTC | 8 cut(s) | 41, 76, 201, 212, 230, 235, 706, 1302 |
| PpsI | GAGTC | 8 cut(s) | 41, 76, 201, 212, 230, 235, 706, 1302 |
| PpuMI | RGGWCCY | 1 cut(s) | 1046 |
| Psp5II | RGGWCCY | 1 cut(s) | 1046 |
| Psp6I | CCWGG | 2 cut(s) | 397, 1184 |
| PspGI | CCWGG | 2 cut(s) | 397, 1184 |
| PspN4I | GGNNCC | 5 cut(s) | 6, 17, 202, 417, 1048 |
| PspPI | GGNCC | 3 cut(s) | 15, 139, 1046 |
| PspPPI | RGGWCCY | 1 cut(s) | 1046 |
| PstI | CTGCAG | 1 cut(s) | 456 |
| PsuI | RGATCY | 2 cut(s) | 4, 1278 |
| PsyI | GACNNNGTC | 1 cut(s) | 239 |
| RsaI | GTAC | 1 cut(s) | 443 |
| RsaNI | GTAC | 1 cut(s) | 442 |
| SapI | GCTCTTC | 1 cut(s) | 579 |
| SaqAI | TTAA | 5 cut(s) | 21, 68, 345, 1133, 1473 |
| SatI | GCNGC | 8 cut(s) | 142, 391, 455, 603, 1155, 1190, 1247, 1437 |
| Sau3AI | GATC | 5 cut(s) | 4, 1146, 1198, 1278, 1357 |
| Sau96I | GGNCC | 3 cut(s) | 15, 139, 1046 |
| SchI | GAGTC | 8 cut(s) | 41, 76, 201, 212, 230, 236, 706, 1303 |
| ScrFI | CCNGG | 2 cut(s) | 399, 1186 |
| SfaNI | GCATC | 4 cut(s) | 97, 601, 1228, 1364 |
| SfcI | CTRYAG | 3 cut(s) | 452, 786, 1282 |
| SinI | GGWCC | 1 cut(s) | 1046 |
| SmlI | CTYRAG | 2 cut(s) | 1301, 1319 |
| SmoI | CTYRAG | 2 cut(s) | 1301, 1319 |
| SpeI | ACTAGT | 2 cut(s) | 31, 673 |
| Sse9I | AATT | 5 cut(s) | 528, 759, 927, 1347, 1455 |
| SseBI | AGGCCT | 1 cut(s) | 479 |
| SsiI | CCGC | 5 cut(s) | 127, 133, 142, 213, 1234 |
| SspMI | CTAG | 4 cut(s) | 32, 197, 674, 1484 |
| StuI | AGGCCT | 1 cut(s) | 479 |
| StyD4I | CCNGG | 2 cut(s) | 397, 1184 |
| StyI | CCWWGG | 4 cut(s) | 523, 882, 1055, 1068 |
| TaaI | ACNGT | 4 cut(s) | 153, 169, 709, 987 |
| TaiI | ACGT | 1 cut(s) | 1107 |
| TaqI | TCGA | 6 cut(s) | 105, 255, 340, 405, 1113, 1329 |
| TaqII | GACCGA | 2 cut(s) | 63, 271 |
| TasI | AATT | 5 cut(s) | 528, 759, 927, 1347, 1455 |
| TatI | WGTACW | 1 cut(s) | 441 |
| TauI | GCSGC | 1 cut(s) | 144 |
| TfiI | GAWTC | 3 cut(s) | 93, 941, 1480 |
| Tru1I | TTAA | 5 cut(s) | 21, 68, 345, 1133, 1473 |
| Tru9I | TTAA | 5 cut(s) | 21, 68, 345, 1133, 1473 |
| TscAI | CASTG | 4 cut(s) | 623, 694, 1423, 1502 |
| TseFI | GTSAC | 2 cut(s) | 709, 1100 |
| TseI | GCWGC | 7 cut(s) | 390, 454, 602, 1154, 1189, 1246, 1436 |
| Tsp45I | GTSAC | 2 cut(s) | 709, 1100 |
| TspDTI | ATGAA | 8 cut(s) | 27, 260, 767, 785, 795, 903, 1026, 1549 |
| TspGWI | ACGGA | 1 cut(s) | 851 |
| TspRI | CASTG | 4 cut(s) | 623, 694, 1423, 1502 |
| Tth111I | GACNNNGTC | 1 cut(s) | 239 |
| VpaK11BI | GGWCC | 1 cut(s) | 1046 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 899 |
| XapI | RAATTY | 3 cut(s) | 528, 927, 1455 |
| XbaI | TCTAGA | 1 cut(s) | 1483 |
| XceI | RCATGY | 1 cut(s) | 442 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1445 |
| XspI | CTAG | 4 cut(s) | 32, 197, 674, 1484 |