MD08G1044400.v1.1

Catalyzes the ferrous insertion into protoporphyrin IX

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
3393613 .. 3397105
3493 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1044400.v1.1.491

Sequence Viewer

Length: 1422 bp
ATGGACTCCGCCACATGCTCCCGCGTTCTTCCCCAAATCAATCTCTCCCATTCAGATCGTAGAGTATCCGCTGGTAGGTCGGGATCTGCCTCTTTCCGTTCATCCAGGGGATTGAAAATTTCGAAACAGCTCACAGTTTCATGCTCTGCAGCGAGTGATAAAGGAAATGACATGTTTGGGTTATCACATTATTCTAAGAAAAACCCTGTTGGGGAAGTATTATGTCCGGCGGGTGTATGCACTTATGGTGGGACTGGTGTAGAGTCTCATTCCCATGTTGGGGAAGAGAAGGTTGGAGTGCTGCTTCTGAATCTTGGAGGACCTGAGACGCTTAATGATGTTCAGCCGTTTTTGTTCAATCTTTTTGCCGACCCGGATATCATTCGCCTCCCAAGGTTGTTTCGGTTTCTCCAGCAACCATTGGCGAAATTAATTTCTGTGCTTCGAGCCCCAAAAAGCAAAGAAGGTTATGCTGCTATAGGAGGTGGTTCACCATTGCGTAAAATTACAGATGAGCAGGCAAATGAACTCAAAAAGACTCTGGAATCGAAGGACTTGCCTGTTAATGTTTATGTGGGAATGCGTTATTGGTACCCGTTTACTGAGGAAGCAGTTCAGCAAATTAAGAAAGACAGAATAACCAGGCTTGTGGTCCTGCCTCTATACCCTCAGTTCTCTATCTCTACAACTGGATCAAGCGTTTCTGTGCTCCGGGATATTTTCAGGAAAGATGCGTACCTATCAAGGATGCCTGTTTCTATTATAAACTCGTGGTATCAACGTGAAGGCTATCTTAAGTCAATGGCTGACTTGATTTCCAAAGAGCTAGAAAGTTTTTCTGAGCCTGCAGAGGTCATGATATTCTTCAGTGCCCACGGAGTACCGCTCAGTTACGTGGAGGATGCCGGAGATCCTTACAAAGATCAAATGGAGGAGTGCATCTTCTTAATAATGAAAGAGCTGAAATCTAGAGGAATCAACAATGAACATACCCTTGCTTACCAGAGCCGAGTTGGTCCTGTGCAATGGCTAAAGCCCTACACTGATGAAGTTCTTGTTGAGCTTGGCCAGAAAGGCGTGAAAAGTCTCCTAGCTGTTCCAGTCAGCTTTGTGAGCGAGCACATAGAGACTCTTGAAGAAATTGATATGGAGTACAGGGAATTGGCCCTTGAATCTGGCATTGAGAATTGGGGCCGAGTCCCTGCCCTTGGTTGTACTCCTTCGTTTATAACAGACCTGGCAGATGCAGTAATAGAAGCCTTACCACTTGCAACAGCCATGTCAACCCCACAAACTACCTCAGAAGTAGTCGATCACGACCCCCTGAGATACGCTATCAAGATATTCTTTGGTTCCTTTTTGGCATTTGTTTTGTTCTTCTCCCCGAAAATGATCATGGCTTTCAGGAACCACCTGATTTAA

Protein Analysis

474

Amino Acids

52.6

Weight (kDa)

6.06

Isoelectric Point (pI)

44.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ferrochelatase PF00762 97 - 420 4.6e-111 Ferrochelatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 764, 1229
Acc65I GGTACC 1 cut(s) 591
AccB1I GGYRCC 1 cut(s) 591
AccBSI CCGCTC 1 cut(s) 886
AccII CGCG 1 cut(s) 24
AciI CCGC 5 cut(s) 9, 22, 69, 230, 884
AclWI GGATC 3 cut(s) 91, 700, 905
AcoI YGGCCR 1 cut(s) 1066
AcsI RAATTY 1 cut(s) 117
AcuI CTGAAG 1 cut(s) 850
AfaI GTAC 5 cut(s) 593, 737, 882, 1154, 1216
AfiI CCNNNNNNNGG 5 cut(s) 75, 211, 279, 280, 1208
AflII CTTAAG 1 cut(s) 794
AflIII ACRYGT 1 cut(s) 171
AgsI TTSAA 4 cut(s) 115, 358, 1136, 1172
AjnI CCWGG 3 cut(s) 104, 641, 1236
AjuI GAANNNNNNNTTGG 4 cut(s) 276, 308, 571, 603
AluBI AGCT 6 cut(s) 130, 826, 961, 1063, 1094, 1107
AluI AGCT 6 cut(s) 130, 826, 961, 1063, 1094, 1107
Alw21I GWGCWC 2 cut(s) 711, 1122
Alw26I GTCTC 4 cut(s) 270, 320, 1091, 1121
AlwI GGATC 3 cut(s) 91, 700, 905
AoxI GGCC 3 cut(s) 1066, 1164, 1192
ApeKI GCWGC 3 cut(s) 149, 301, 473
ApoI RAATTY 1 cut(s) 117
AseI ATTAAT 1 cut(s) 431
Asp700I GAANNNNTTC 1 cut(s) 612
Asp718I GGTACC 1 cut(s) 591
AspS9I GGNCC 5 cut(s) 320, 652, 1016, 1165, 1192
AsuC2I CCSGG 2 cut(s) 374, 713
AsuHPI GGTGA 1 cut(s) 483
AsuII TTCGAA 1 cut(s) 122
AvaII GGWCC 3 cut(s) 320, 652, 1016
BaeGI GKGCMC 1 cut(s) 874
BalI TGGCCA 1 cut(s) 1068
BanI GGYRCC 1 cut(s) 591
BanII GRGCYC 1 cut(s) 451
BauI CACGAG 1 cut(s) 769
Bbv12I GWGCWC 2 cut(s) 711, 1122
BbvI GCAGC 3 cut(s) 161, 288, 460
BceAI ACGGC 1 cut(s) 331
BcgI CGANNNNNNTGC 2 cut(s) 538, 572
BciT130I CCWGG 3 cut(s) 106, 643, 1238
BciVI GTATCC 1 cut(s) 76
BclI TGATCA 1 cut(s) 1392
BcnI CCSGG 2 cut(s) 374, 713
BcoDI GTCTC 4 cut(s) 270, 320, 1091, 1121
BfaI CTAG 3 cut(s) 827, 969, 1091
BfmI CTRYAG 3 cut(s) 147, 477, 846
BfrI CTTAAG 1 cut(s) 794
BfuI GTATCC 1 cut(s) 76
BglI GCCNNNNNGGC 1 cut(s) 1074
BisI GCNGC 3 cut(s) 150, 302, 474
BlsI GCNGC 3 cut(s) 151, 303, 475
Bme1390I CCNGG 5 cut(s) 106, 374, 643, 713, 1238
Bme18I GGWCC 3 cut(s) 320, 652, 1016
BmgT120I GGNCC 5 cut(s) 320, 652, 1016, 1165, 1192
BmiI GGNNCC 4 cut(s) 593, 1193, 1354, 1409
BmrFI CCNGG 5 cut(s) 106, 374, 643, 713, 1238
BmsI GCATC 5 cut(s) 721, 738, 892, 948, 1234
BplI GAGNNNNNCTC 2 cut(s) 870, 902
BpmI CTGGAG 1 cut(s) 395
Bpu14I TTCGAA 1 cut(s) 122
BpuMI CCSGG 2 cut(s) 374, 713
BsaAI YACGTR 1 cut(s) 895
BsaJI CCNNGG 4 cut(s) 105, 392, 874, 1207
Bsc4I CCNNNNNNNGG 5 cut(s) 75, 211, 279, 280, 1208
Bse1I ACTGG 3 cut(s) 259, 694, 1100
Bse3DI GCAATG 2 cut(s) 494, 1031
BseBI CCWGG 3 cut(s) 106, 643, 1238
BseDI CCNNGG 4 cut(s) 105, 392, 874, 1207
BseGI GGATG 3 cut(s) 101, 753, 907
BseLI CCNNNNNNNGG 5 cut(s) 75, 211, 279, 280, 1208
BseMI GCAATG 2 cut(s) 494, 1031
BseMII CTCAG 7 cut(s) 315, 594, 683, 831, 901, 1314, 1316
BseNI ACTGG 3 cut(s) 259, 694, 1100
BseRI GAGGAG 1 cut(s) 947
BseSI GKGCMC 1 cut(s) 874
BseXI GCAGC 3 cut(s) 161, 288, 460
Bsh1236I CGCG 1 cut(s) 24
BshFI GGCC 3 cut(s) 1068, 1166, 1194
BshNI GGYRCC 1 cut(s) 591
BsiHKAI GWGCWC 2 cut(s) 711, 1122
BsiSI CCGG 4 cut(s) 227, 374, 712, 906
BslFI GGGAC 2 cut(s) 265, 1184
BslI CCNNNNNNNGG 5 cut(s) 75, 211, 279, 280, 1208
BsmAI GTCTC 4 cut(s) 270, 320, 1091, 1121
BsmBI CGTCTC 1 cut(s) 320
BsmFI GGGAC 2 cut(s) 265, 1184
BsmI GAATGC 1 cut(s) 585
BsnI GGCC 3 cut(s) 1068, 1166, 1194
Bsp119I TTCGAA 1 cut(s) 122
Bsp1286I GDGCHC 4 cut(s) 451, 711, 874, 1122
Bsp143I GATC 7 cut(s) 55, 83, 692, 910, 922, 1312, 1392
BspACI CCGC 5 cut(s) 9, 22, 69, 230, 884
BspANI GGCC 3 cut(s) 1068, 1166, 1194
BspCNI CTCAG 7 cut(s) 316, 595, 682, 832, 900, 1313, 1317
BspFNI CGCG 1 cut(s) 24
BspHI TCATGA 1 cut(s) 855
BspLI GGNNCC 4 cut(s) 593, 1193, 1354, 1409
BspMAI CTGCAG 2 cut(s) 151, 850
BspPI GGATC 3 cut(s) 91, 700, 905
BspT104I TTCGAA 1 cut(s) 122
BspT107I GGYRCC 1 cut(s) 591
BspTI CTTAAG 1 cut(s) 794
BsrBI CCGCTC 1 cut(s) 886
BsrDI GCAATG 2 cut(s) 494, 1031
BsrI ACTGG 3 cut(s) 259, 694, 1100
BssECI CCNNGG 4 cut(s) 105, 392, 874, 1207
BssMI GATC 7 cut(s) 55, 83, 692, 910, 922, 1312, 1392
BssSI CACGAG 1 cut(s) 769
BssT1I CCWWGG 2 cut(s) 392, 1207
Bst2BI CACGAG 1 cut(s) 769
Bst2UI CCWGG 3 cut(s) 106, 643, 1238
Bst4CI ACNGT 1 cut(s) 136
Bst6I CTCTTC 1 cut(s) 279
BstAFI CTTAAG 1 cut(s) 794
BstBAI YACGTR 1 cut(s) 895
BstBI TTCGAA 1 cut(s) 122
BstC8I GCNNGC 3 cut(s) 519, 846, 1118
BstDEI CTNAG 8 cut(s) 195, 324, 603, 669, 840, 887, 1300, 1325
BstDSI CCRYGG 1 cut(s) 874
BstF5I GGATG 3 cut(s) 101, 753, 907
BstFNI CGCG 1 cut(s) 24
BstKTI GATC 7 cut(s) 58, 86, 695, 913, 925, 1315, 1395
BstMAI GTCTC 4 cut(s) 270, 320, 1091, 1121
BstMBI GATC 7 cut(s) 55, 83, 692, 910, 922, 1312, 1392
BstMWI GCNNNNNNNGC 2 cut(s) 1074, 1113
BstNI CCWGG 3 cut(s) 106, 643, 1238
BstNSI RCATGY 2 cut(s) 18, 175
BstSCI CCNGG 5 cut(s) 104, 372, 641, 711, 1236
BstSFI CTRYAG 3 cut(s) 147, 477, 846
BstSLI GKGCMC 1 cut(s) 874
BstUI CGCG 1 cut(s) 24
BstV1I GCAGC 3 cut(s) 161, 288, 460
BstX2I RGATCY 2 cut(s) 83, 910
BstXI CCANNNNNNTGG 1 cut(s) 649
BstYI RGATCY 2 cut(s) 83, 910
BsuI GTATCC 1 cut(s) 76
BsuRI GGCC 3 cut(s) 1068, 1166, 1194
BtgI CCRYGG 1 cut(s) 874
BtsCI GGATG 3 cut(s) 101, 753, 907
BtsIMutI CAGTG 2 cut(s) 874, 1041
Cac8I GCNNGC 3 cut(s) 519, 846, 1118
CciI TCATGA 1 cut(s) 855
Cfr13I GGNCC 5 cut(s) 320, 652, 1016, 1165, 1192
CseI GACGC 1 cut(s) 337
Csp6I GTAC 5 cut(s) 592, 736, 881, 1153, 1215
CviAII CATG 7 cut(s) 15, 141, 172, 275, 856, 1279, 1396
CviQI GTAC 5 cut(s) 592, 736, 881, 1153, 1215
DdeI CTNAG 8 cut(s) 195, 324, 603, 669, 840, 887, 1300, 1325
DpnI GATC 7 cut(s) 57, 85, 694, 912, 924, 1314, 1394
DpnII GATC 7 cut(s) 55, 83, 692, 910, 922, 1312, 1392
EaeI YGGCCR 1 cut(s) 1066
Eam1104I CTCTTC 1 cut(s) 279
EarI CTCTTC 1 cut(s) 279
Eco130I CCWWGG 2 cut(s) 392, 1207
Eco24I GRGCYC 1 cut(s) 451
Eco32I GATATC 1 cut(s) 379
Eco47I GGWCC 3 cut(s) 320, 652, 1016
Eco57I CTGAAG 1 cut(s) 850
EcoO109I RGGNCCY 1 cut(s) 320
EcoRII CCWGG 3 cut(s) 104, 641, 1236
EcoRV GATATC 1 cut(s) 379
EcoT14I CCWWGG 2 cut(s) 392, 1207
EcoT38I GRGCYC 1 cut(s) 451
ErhI CCWWGG 2 cut(s) 392, 1207
Esp3I CGTCTC 1 cut(s) 320
FaeI CATG 7 cut(s) 18, 144, 175, 278, 859, 1282, 1399
FalI AAGNNNNNCTT 4 cut(s) 777, 809, 1331, 1363
FaqI GGGAC 2 cut(s) 265, 1184
FatI CATG 7 cut(s) 14, 140, 171, 274, 855, 1278, 1395
FauI CCCGC 2 cut(s) 29, 223
FbaI TGATCA 1 cut(s) 1392
Fnu4HI GCNGC 3 cut(s) 150, 302, 474
FokI GGATG 3 cut(s) 88, 760, 914
FriOI GRGCYC 1 cut(s) 451
Fsp4HI GCNGC 3 cut(s) 150, 302, 474
FspBI CTAG 3 cut(s) 827, 969, 1091
GluI GCNGC 3 cut(s) 150, 302, 474
GsuI CTGGAG 1 cut(s) 395
HaeIII GGCC 3 cut(s) 1068, 1166, 1194
HapII CCGG 4 cut(s) 227, 374, 712, 906
HgaI GACGC 1 cut(s) 337
Hin1II CATG 7 cut(s) 18, 144, 175, 278, 859, 1282, 1399
HincII GTYRAC 1 cut(s) 1284
HindII GTYRAC 1 cut(s) 1284
HinfI GANTC 9 cut(s) 5, 263, 310, 538, 545, 975, 1129, 1172, 1197
HpaII CCGG 4 cut(s) 227, 374, 712, 906
HphI GGTGA 1 cut(s) 483
Hpy166II GTNNAC 3 cut(s) 491, 600, 1284
Hpy188I TCNGA 4 cut(s) 55, 309, 841, 1303
Hpy188III TCNNGA 9 cut(s) 81, 542, 724, 856, 969, 1133, 1316, 1339, 1405
Hpy8I GTNNAC 3 cut(s) 491, 600, 1284
HpyAV CCTTC 5 cut(s) 283, 458, 544, 779, 1230
HpyCH4III ACNGT 1 cut(s) 136
HpyCH4IV ACGT 2 cut(s) 781, 894
HpyCH4V TGCA 7 cut(s) 149, 240, 848, 939, 1024, 1247, 1271
HpyF10VI GCNNNNNNNGC 2 cut(s) 1074, 1113
HpyF3I CTNAG 8 cut(s) 195, 324, 603, 669, 840, 887, 1300, 1325
HpySE526I ACGT 2 cut(s) 781, 894
Hsp92II CATG 7 cut(s) 18, 144, 175, 278, 859, 1282, 1399
KpnI GGTACC 1 cut(s) 595
Ksp22I TGATCA 1 cut(s) 1392
Kzo9I GATC 7 cut(s) 55, 83, 692, 910, 922, 1312, 1392
LmnI GCTCC 2 cut(s) 23, 714
Lsp1109I GCAGC 3 cut(s) 161, 288, 460
LweI GCATC 5 cut(s) 721, 738, 892, 948, 1234
MaeI CTAG 3 cut(s) 827, 969, 1091
MaeII ACGT 2 cut(s) 781, 894
MaeIII GTNAC 1 cut(s) 890
MalI GATC 7 cut(s) 57, 85, 694, 912, 924, 1314, 1394
MbiI CCGCTC 1 cut(s) 886
MboI GATC 7 cut(s) 55, 83, 692, 910, 922, 1312, 1392
MboII GAAGA 6 cut(s) 20, 296, 856, 934, 1148, 1369
MflI RGATCY 2 cut(s) 83, 910
MhlI GDGCHC 4 cut(s) 451, 711, 874, 1122
MlsI TGGCCA 1 cut(s) 1068
MluCI AATT 8 cut(s) 117, 428, 432, 504, 621, 1140, 1160, 1186
MluNI TGGCCA 1 cut(s) 1068
MlyI GAGTC 4 cut(s) 272, 532, 1123, 1206
MmeI TCCRAC 1 cut(s) 274
Mox20I TGGCCA 1 cut(s) 1068
MroXI GAANNNNTTC 1 cut(s) 612
MscI TGGCCA 1 cut(s) 1068
MseI TTAA 7 cut(s) 333, 431, 564, 624, 795, 947, 1420
MslI CAYNNNNRTG 1 cut(s) 273
Msp20I TGGCCA 1 cut(s) 1068
MspA1I CMGCKG 1 cut(s) 71
MspCI CTTAAG 1 cut(s) 794
MspI CCGG 4 cut(s) 227, 374, 712, 906
MspR9I CCNGG 5 cut(s) 106, 374, 643, 713, 1238
Mva1269I GAATGC 1 cut(s) 585
MvaI CCWGG 3 cut(s) 106, 643, 1238
MvnI CGCG 1 cut(s) 24
MwoI GCNNNNNNNGC 2 cut(s) 1074, 1113
NciI CCSGG 2 cut(s) 374, 713
NdeII GATC 7 cut(s) 55, 83, 692, 910, 922, 1312, 1392
NlaIII CATG 7 cut(s) 18, 144, 175, 278, 859, 1282, 1399
NlaIV GGNNCC 4 cut(s) 593, 1193, 1354, 1409
NmeAIII GCCGAG 2 cut(s) 1034, 1220
NspI RCATGY 2 cut(s) 18, 175
NspV TTCGAA 1 cut(s) 122
PagI TCATGA 1 cut(s) 855
PciI ACATGT 1 cut(s) 171
PctI GAATGC 1 cut(s) 585
PdmI GAANNNNTTC 1 cut(s) 612
PfeI GAWTC 4 cut(s) 310, 545, 975, 1172
PfoI TCCNGGA 1 cut(s) 711
PkrI GCNGC 3 cut(s) 151, 303, 475
PleI GAGTC 4 cut(s) 271, 532, 1123, 1205
PpsI GAGTC 4 cut(s) 271, 532, 1123, 1205
Ppu21I YACGTR 1 cut(s) 895
PpuMI RGGWCCY 1 cut(s) 320
PscI ACATGT 1 cut(s) 171
PshBI ATTAAT 1 cut(s) 431
PsiI TTATAA 2 cut(s) 764, 1229
Psp5II RGGWCCY 1 cut(s) 320
Psp6I CCWGG 3 cut(s) 104, 641, 1236
PspGI CCWGG 3 cut(s) 104, 641, 1236
PspN4I GGNNCC 4 cut(s) 593, 1193, 1354, 1409
PspPI GGNCC 5 cut(s) 320, 652, 1016, 1165, 1192
PspPPI RGGWCCY 1 cut(s) 320
PstI CTGCAG 2 cut(s) 151, 850
PsuI RGATCY 2 cut(s) 83, 910
RsaI GTAC 5 cut(s) 593, 737, 882, 1154, 1216
RsaNI GTAC 5 cut(s) 592, 736, 881, 1153, 1215
RseI CAYNNNNRTG 1 cut(s) 273
SaqAI TTAA 7 cut(s) 333, 431, 564, 624, 795, 947, 1420
SatI GCNGC 3 cut(s) 150, 302, 474
Sau3AI GATC 7 cut(s) 55, 83, 692, 910, 922, 1312, 1392
Sau96I GGNCC 5 cut(s) 320, 652, 1016, 1165, 1192
SchI GAGTC 4 cut(s) 272, 532, 1123, 1206
ScrFI CCNGG 5 cut(s) 106, 374, 643, 713, 1238
SduI GDGCHC 4 cut(s) 451, 711, 874, 1122
SfaNI GCATC 5 cut(s) 721, 738, 892, 948, 1234
SfcI CTRYAG 3 cut(s) 147, 477, 846
SfuI TTCGAA 1 cut(s) 122
SinI GGWCC 3 cut(s) 320, 652, 1016
SmiMI CAYNNNNRTG 1 cut(s) 273
SmlI CTYRAG 1 cut(s) 794
SmoI CTYRAG 1 cut(s) 794
Sse9I AATT 8 cut(s) 117, 428, 432, 504, 621, 1140, 1160, 1186
SsiI CCGC 5 cut(s) 9, 22, 69, 230, 884
SspMI CTAG 3 cut(s) 827, 969, 1091
StyD4I CCNGG 5 cut(s) 104, 372, 641, 711, 1236
StyI CCWWGG 2 cut(s) 392, 1207
TaaI ACNGT 1 cut(s) 136
TaiI ACGT 2 cut(s) 784, 897
TaqI TCGA 4 cut(s) 122, 445, 548, 1311
TasI AATT 8 cut(s) 117, 428, 432, 504, 621, 1140, 1160, 1186
TatI WGTACW 2 cut(s) 1152, 1214
TfiI GAWTC 4 cut(s) 310, 545, 975, 1172
Tru1I TTAA 7 cut(s) 333, 431, 564, 624, 795, 947, 1420
Tru9I TTAA 7 cut(s) 333, 431, 564, 624, 795, 947, 1420
TscAI CASTG 2 cut(s) 874, 1048
TseI GCWGC 3 cut(s) 149, 301, 473
TspDTI ATGAA 6 cut(s) 90, 129, 540, 968, 999, 1062
TspGWI ACGGA 2 cut(s) 86, 891
TspRI CASTG 2 cut(s) 874, 1048
Vha464I CTTAAG 1 cut(s) 794
VpaK11BI GGWCC 3 cut(s) 320, 652, 1016
VspI ATTAAT 1 cut(s) 431
XapI RAATTY 1 cut(s) 117
XbaI TCTAGA 1 cut(s) 968
XceI RCATGY 2 cut(s) 18, 175
XcmI CCANNNNNNNNNTGG 1 cut(s) 1010
XmnI GAANNNNTTC 1 cut(s) 612
XspI CTAG 3 cut(s) 827, 969, 1091
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.