Catalyzes the ferrous insertion into protoporphyrin IX
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G26030 AT5G26030 |
| fragaria_vesca | FvH4_2g32120 FvH4_2g32120 |
| malus_domestica | MD08G1044400.v1.1 MD15G1061700.v1.1 |
| prunus_persica | Prupe.1G414400_v2.0.a1 |
| pyrus_communis | pycom08g03580 pycom15g05760 |
| rosa_chinensis | RchiOBHm_Chr6g0272541 RchiOBHm_Chr6g0310621 |
| rosa_laevigata | RLG00000010472 RLG00000013668 |
| rosa_multiflora | Rmu_sc0003080.1_g000019 Rmu_sc0005386.1_g000002 Rmu_sc0016392.1_g000002 Rmu_sc0033505.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00158420 Rroxscaffold_7G00196170 |
| rosa_rugosa | Rorug06G0069800 Rorug06G0381500 Rorug06G0381600 |
| rosa_samantha | Rh6AG186200 Rh6AG495500 Rh6BG189300 Rh6BG505000 Rh6CG187100 Rh6CG510600 Rh6DG178800 Rh6DG496400 |
| rosa_wichuraiana | Rw6G016040 Rw6G043090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 818, 1283 |
| Acc65I | GGTACC | 2 cut(s) | 645, 934 |
| AccB1I | GGYRCC | 2 cut(s) | 645, 934 |
| AccBSI | CCGCTC | 1 cut(s) | 69 |
| AccI | GTMKAC | 1 cut(s) | 442 |
| AccII | CGCG | 1 cut(s) | 113 |
| AciI | CCGC | 6 cut(s) | 9, 67, 128, 281, 335, 637 |
| AclWI | GGATC | 3 cut(s) | 754, 779, 959 |
| AcoI | YGGCCR | 1 cut(s) | 1120 |
| AcsI | RAATTY | 3 cut(s) | 80, 173, 820 |
| AcuI | CTGAAG | 2 cut(s) | 449, 904 |
| AcyI | GRCGYC | 1 cut(s) | 6 |
| AfaI | GTAC | 5 cut(s) | 641, 647, 936, 1077, 1208 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 259, 334, 1262 |
| AgsI | TTSAA | 5 cut(s) | 173, 1018, 1087, 1190, 1338 |
| AjnI | CCWGG | 1 cut(s) | 695 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 207, 239, 330, 362, 578, 610 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 738, 770 |
| AluBI | AGCT | 7 cut(s) | 169, 503, 880, 1022, 1117, 1148, 1161 |
| AluI | AGCT | 7 cut(s) | 169, 503, 880, 1022, 1117, 1148, 1161 |
| Alw21I | GWGCWC | 5 cut(s) | 107, 185, 505, 765, 1176 |
| Alw26I | GTCTC | 2 cut(s) | 321, 374 |
| AlwI | GGATC | 3 cut(s) | 754, 779, 959 |
| Ama87I | CYCGRG | 1 cut(s) | 377 |
| AoxI | GGCC | 4 cut(s) | 1120, 1218, 1246, 1264 |
| ApeKI | GCWGC | 5 cut(s) | 188, 278, 355, 1325, 1328 |
| ApoI | RAATTY | 3 cut(s) | 80, 173, 820 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 666, 773 |
| Asp718I | GGTACC | 2 cut(s) | 645, 934 |
| AspA2I | CCTAGG | 1 cut(s) | 446 |
| AspS9I | GGNCC | 5 cut(s) | 374, 780, 1070, 1219, 1246 |
| AsuC2I | CCSGG | 1 cut(s) | 428 |
| AsuHPI | GGTGA | 1 cut(s) | 1425 |
| AvaI | CYCGRG | 1 cut(s) | 377 |
| AvaII | GGWCC | 3 cut(s) | 374, 780, 1070 |
| AvrII | CCTAGG | 1 cut(s) | 446 |
| BaeGI | GKGCMC | 1 cut(s) | 928 |
| BalI | TGGCCA | 1 cut(s) | 1122 |
| BanI | GGYRCC | 2 cut(s) | 645, 934 |
| BanII | GRGCYC | 1 cut(s) | 505 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1125, 1157 |
| BbsI | GAAGAC | 2 cut(s) | 90, 1133 |
| Bbv12I | GWGCWC | 5 cut(s) | 107, 185, 505, 765, 1176 |
| BbvI | GCAGC | 5 cut(s) | 175, 265, 342, 1337, 1340 |
| BccI | CCATC | 2 cut(s) | 82, 1374 |
| BceAI | ACGGC | 2 cut(s) | 293, 385 |
| BciT130I | CCWGG | 1 cut(s) | 697 |
| BclI | TGATCA | 1 cut(s) | 1363 |
| BcnI | CCSGG | 1 cut(s) | 428 |
| BcoDI | GTCTC | 2 cut(s) | 321, 374 |
| BfaI | CTAG | 5 cut(s) | 447, 881, 1023, 1145, 1412 |
| BglII | AGATCT | 1 cut(s) | 1288 |
| BisI | GCNGC | 6 cut(s) | 9, 189, 279, 356, 1326, 1329 |
| BlnI | CCTAGG | 1 cut(s) | 446 |
| BlsI | GCNGC | 6 cut(s) | 10, 190, 280, 357, 1327, 1330 |
| Bme1390I | CCNGG | 2 cut(s) | 428, 697 |
| Bme18I | GGWCC | 3 cut(s) | 374, 780, 1070 |
| BmeT110I | CYCGRG | 1 cut(s) | 377 |
| BmgT120I | GGNCC | 5 cut(s) | 374, 780, 1070, 1219, 1246 |
| BmiI | GGNNCC | 6 cut(s) | 55, 376, 647, 936, 1247, 1460 |
| BmrFI | CCNGG | 2 cut(s) | 428, 697 |
| BmsI | GCATC | 3 cut(s) | 239, 1288, 1431 |
| BpiI | GAAGAC | 2 cut(s) | 90, 1133 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 342, 374 |
| BpmI | CTGGAG | 2 cut(s) | 749, 981 |
| Bpu10I | CCTNAGC | 1 cut(s) | 70 |
| BpuMI | CCSGG | 1 cut(s) | 428 |
| BsaBI | GATNNNNATC | 1 cut(s) | 789 |
| BsaHI | GRCGYC | 1 cut(s) | 6 |
| BsaJI | CCNNGG | 4 cut(s) | 309, 446, 928, 1261 |
| BsaWI | WCCGGW | 1 cut(s) | 23 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 254, 284 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 259, 334, 1262 |
| Bse1I | ACTGG | 6 cut(s) | 480, 614, 647, 748, 1154, 1326 |
| Bse3DI | GCAATG | 3 cut(s) | 145, 235, 330 |
| Bse8I | GATNNNNATC | 1 cut(s) | 789 |
| BseBI | CCWGG | 1 cut(s) | 697 |
| BseDI | CCNNGG | 4 cut(s) | 309, 446, 928, 1261 |
| BseJI | GATNNNNATC | 1 cut(s) | 789 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 259, 334, 1262 |
| BseMI | GCAATG | 3 cut(s) | 145, 235, 330 |
| BseMII | CTCAG | 4 cut(s) | 84, 648, 885, 955 |
| BseNI | ACTGG | 6 cut(s) | 480, 614, 647, 748, 1154, 1326 |
| BseRI | GAGGAG | 1 cut(s) | 1001 |
| BseSI | GKGCMC | 1 cut(s) | 928 |
| BseXI | GCAGC | 5 cut(s) | 175, 265, 342, 1337, 1340 |
| BseYI | CCCAGC | 1 cut(s) | 1354 |
| BsgI | GTGCAG | 1 cut(s) | 885 |
| Bsh1236I | CGCG | 1 cut(s) | 113 |
| BshFI | GGCC | 4 cut(s) | 1122, 1220, 1248, 1266 |
| BshNI | GGYRCC | 2 cut(s) | 645, 934 |
| BsiHKAI | GWGCWC | 5 cut(s) | 107, 185, 505, 765, 1176 |
| BsiHKCI | CYCGRG | 1 cut(s) | 377 |
| BsiSI | CCGG | 4 cut(s) | 24, 51, 428, 1230 |
| BslFI | GGGAC | 3 cut(s) | 316, 698, 1238 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 259, 334, 1262 |
| BsmAI | GTCTC | 2 cut(s) | 321, 374 |
| BsmBI | CGTCTC | 1 cut(s) | 374 |
| BsmFI | GGGAC | 3 cut(s) | 316, 698, 1238 |
| BsmI | GAATGC | 3 cut(s) | 639, 1415, 1451 |
| BsnI | GGCC | 4 cut(s) | 1122, 1220, 1248, 1266 |
| BsoBI | CYCGRG | 1 cut(s) | 377 |
| Bsp1286I | GDGCHC | 6 cut(s) | 107, 185, 505, 765, 928, 1176 |
| Bsp1407I | TGTACA | 1 cut(s) | 1075 |
| Bsp143I | GATC | 7 cut(s) | 746, 784, 867, 964, 976, 1288, 1363 |
| BspACI | CCGC | 6 cut(s) | 9, 67, 128, 281, 335, 637 |
| BspANI | GGCC | 4 cut(s) | 1122, 1220, 1248, 1266 |
| BspCNI | CTCAG | 4 cut(s) | 83, 649, 886, 954 |
| BspFNI | CGCG | 1 cut(s) | 113 |
| BspHI | TCATGA | 2 cut(s) | 909, 1366 |
| BspLI | GGNNCC | 6 cut(s) | 55, 376, 647, 936, 1247, 1460 |
| BspPI | GGATC | 3 cut(s) | 754, 779, 959 |
| BspT107I | GGYRCC | 2 cut(s) | 645, 934 |
| BsrBI | CCGCTC | 1 cut(s) | 69 |
| BsrDI | GCAATG | 3 cut(s) | 145, 235, 330 |
| BsrGI | TGTACA | 1 cut(s) | 1075 |
| BsrI | ACTGG | 6 cut(s) | 480, 614, 647, 748, 1154, 1326 |
| BssECI | CCNNGG | 4 cut(s) | 309, 446, 928, 1261 |
| BssMI | GATC | 7 cut(s) | 746, 784, 867, 964, 976, 1288, 1363 |
| BssNI | GRCGYC | 1 cut(s) | 6 |
| BssT1I | CCWWGG | 2 cut(s) | 446, 1261 |
| Bst2UI | CCWGG | 1 cut(s) | 697 |
| Bst6I | CTCTTC | 3 cut(s) | 198, 333, 1185 |
| BstACI | GRCGYC | 1 cut(s) | 6 |
| BstAUI | TGTACA | 1 cut(s) | 1075 |
| BstC8I | GCNNGC | 2 cut(s) | 573, 900 |
| BstDEI | CTNAG | 5 cut(s) | 70, 507, 657, 894, 941 |
| BstDSI | CCRYGG | 2 cut(s) | 309, 928 |
| BstFNI | CGCG | 1 cut(s) | 113 |
| BstKTI | GATC | 7 cut(s) | 749, 787, 870, 967, 979, 1291, 1366 |
| BstMAI | GTCTC | 2 cut(s) | 321, 374 |
| BstMBI | GATC | 7 cut(s) | 746, 784, 867, 964, 976, 1288, 1363 |
| BstNI | CCWGG | 1 cut(s) | 697 |
| BstNSI | RCATGY | 1 cut(s) | 613 |
| BstSCI | CCNGG | 2 cut(s) | 426, 695 |
| BstSLI | GKGCMC | 1 cut(s) | 928 |
| BstUI | CGCG | 1 cut(s) | 113 |
| BstV1I | GCAGC | 5 cut(s) | 175, 265, 342, 1337, 1340 |
| BstV2I | GAAGAC | 2 cut(s) | 90, 1133 |
| BstX2I | RGATCY | 2 cut(s) | 964, 1288 |
| BstYI | RGATCY | 2 cut(s) | 964, 1288 |
| BsuRI | GGCC | 4 cut(s) | 1122, 1220, 1248, 1266 |
| BtgI | CCRYGG | 2 cut(s) | 309, 928 |
| BtgZI | GCGATG | 1 cut(s) | 216 |
| BtsIMutI | CAGTG | 7 cut(s) | 473, 581, 621, 654, 928, 1095, 1319 |
| Cac8I | GCNNGC | 2 cut(s) | 573, 900 |
| CciI | TCATGA | 2 cut(s) | 909, 1366 |
| Cfr13I | GGNCC | 5 cut(s) | 374, 780, 1070, 1219, 1246 |
| CseI | GACGC | 4 cut(s) | 14, 180, 391, 516 |
| Csp6I | GTAC | 5 cut(s) | 640, 646, 935, 1076, 1207 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 1451 |
| CviAII | CATG | 5 cut(s) | 18, 610, 825, 910, 1367 |
| CviQI | GTAC | 5 cut(s) | 640, 646, 935, 1076, 1207 |
| DdeI | CTNAG | 5 cut(s) | 70, 507, 657, 894, 941 |
| DpnI | GATC | 7 cut(s) | 748, 786, 869, 966, 978, 1290, 1365 |
| DpnII | GATC | 7 cut(s) | 746, 784, 867, 964, 976, 1288, 1363 |
| EaeI | YGGCCR | 1 cut(s) | 1120 |
| Eam1104I | CTCTTC | 3 cut(s) | 198, 333, 1185 |
| EarI | CTCTTC | 3 cut(s) | 198, 333, 1185 |
| Ecl136II | GAGCTC | 1 cut(s) | 503 |
| Eco130I | CCWWGG | 2 cut(s) | 446, 1261 |
| Eco24I | GRGCYC | 1 cut(s) | 505 |
| Eco32I | GATATC | 1 cut(s) | 433 |
| Eco47I | GGWCC | 3 cut(s) | 374, 780, 1070 |
| Eco53kI | GAGCTC | 1 cut(s) | 503 |
| Eco57I | CTGAAG | 2 cut(s) | 449, 904 |
| Eco88I | CYCGRG | 1 cut(s) | 377 |
| EcoICRI | GAGCTC | 1 cut(s) | 503 |
| EcoO109I | RGGNCCY | 1 cut(s) | 374 |
| EcoRI | GAATTC | 1 cut(s) | 173 |
| EcoRII | CCWGG | 1 cut(s) | 695 |
| EcoRV | GATATC | 1 cut(s) | 433 |
| EcoT14I | CCWWGG | 2 cut(s) | 446, 1261 |
| EcoT38I | GRGCYC | 1 cut(s) | 505 |
| ErhI | CCWWGG | 2 cut(s) | 446, 1261 |
| Esp3I | CGTCTC | 1 cut(s) | 374 |
| FaeI | CATG | 5 cut(s) | 21, 613, 828, 913, 1370 |
| FaqI | GGGAC | 3 cut(s) | 316, 698, 1238 |
| FatI | CATG | 5 cut(s) | 17, 609, 824, 909, 1366 |
| FauI | CCCGC | 2 cut(s) | 74, 274 |
| FbaI | TGATCA | 1 cut(s) | 1363 |
| FblI | GTMKAC | 1 cut(s) | 442 |
| Fnu4HI | GCNGC | 6 cut(s) | 9, 189, 279, 356, 1326, 1329 |
| FriOI | GRGCYC | 1 cut(s) | 505 |
| Fsp4HI | GCNGC | 6 cut(s) | 9, 189, 279, 356, 1326, 1329 |
| FspBI | CTAG | 5 cut(s) | 447, 881, 1023, 1145, 1412 |
| GluI | GCNGC | 6 cut(s) | 9, 189, 279, 356, 1326, 1329 |
| GsaI | CCCAGC | 1 cut(s) | 1358 |
| GsuI | CTGGAG | 2 cut(s) | 749, 981 |
| HaeIII | GGCC | 4 cut(s) | 1122, 1220, 1248, 1266 |
| HapII | CCGG | 4 cut(s) | 24, 51, 428, 1230 |
| HgaI | GACGC | 4 cut(s) | 14, 180, 391, 516 |
| Hin1I | GRCGYC | 1 cut(s) | 6 |
| Hin1II | CATG | 5 cut(s) | 21, 613, 828, 913, 1370 |
| HindIII | AAGCTT | 1 cut(s) | 167 |
| HinfI | GANTC | 8 cut(s) | 153, 314, 364, 599, 956, 1029, 1226, 1251 |
| HpaII | CCGG | 4 cut(s) | 24, 51, 428, 1230 |
| HphI | GGTGA | 1 cut(s) | 1425 |
| Hpy166II | GTNNAC | 1 cut(s) | 443 |
| Hpy188I | TCNGA | 5 cut(s) | 58, 87, 162, 468, 895 |
| Hpy188III | TCNNGA | 9 cut(s) | 195, 361, 766, 778, 910, 960, 1187, 1367, 1456 |
| Hpy8I | GTNNAC | 1 cut(s) | 443 |
| Hpy99I | CGWCG | 1 cut(s) | 196 |
| HpyAV | CCTTC | 6 cut(s) | 41, 137, 512, 833, 946, 1284 |
| HpyCH4IV | ACGT | 2 cut(s) | 439, 835 |
| HpyCH4V | TGCA | 5 cut(s) | 138, 291, 581, 902, 1301 |
| HpyF3I | CTNAG | 5 cut(s) | 70, 507, 657, 894, 941 |
| HpySE526I | ACGT | 2 cut(s) | 439, 835 |
| Hsp92I | GRCGYC | 1 cut(s) | 6 |
| Hsp92II | CATG | 5 cut(s) | 21, 613, 828, 913, 1370 |
| KpnI | GGTACC | 2 cut(s) | 649, 938 |
| Ksp22I | TGATCA | 1 cut(s) | 1363 |
| Kzo9I | GATC | 7 cut(s) | 746, 784, 867, 964, 976, 1288, 1363 |
| LmnI | GCTCC | 5 cut(s) | 26, 59, 363, 508, 768 |
| Lsp1109I | GCAGC | 5 cut(s) | 175, 265, 342, 1337, 1340 |
| LweI | GCATC | 3 cut(s) | 239, 1288, 1431 |
| MaeI | CTAG | 5 cut(s) | 447, 881, 1023, 1145, 1412 |
| MaeII | ACGT | 2 cut(s) | 439, 835 |
| MalI | GATC | 7 cut(s) | 748, 786, 869, 966, 978, 1290, 1365 |
| MbiI | CCGCTC | 1 cut(s) | 69 |
| MboI | GATC | 7 cut(s) | 746, 784, 867, 964, 976, 1288, 1363 |
| MboII | GAAGA | 9 cut(s) | 90, 215, 256, 350, 455, 781, 910, 1133, 1202 |
| MfeI | CAATTG | 1 cut(s) | 120 |
| MflI | RGATCY | 2 cut(s) | 964, 1288 |
| MhlI | GDGCHC | 6 cut(s) | 107, 185, 505, 765, 928, 1176 |
| MlsI | TGGCCA | 1 cut(s) | 1122 |
| MluCI | AATT | 8 cut(s) | 80, 120, 173, 482, 675, 725, 820, 1240 |
| MluNI | TGGCCA | 1 cut(s) | 1122 |
| MlyI | GAGTC | 3 cut(s) | 323, 950, 1260 |
| MmeI | TCCRAC | 2 cut(s) | 81, 328 |
| Mox20I | TGGCCA | 1 cut(s) | 1122 |
| MroXI | GAANNNNTTC | 2 cut(s) | 666, 773 |
| MscI | TGGCCA | 1 cut(s) | 1122 |
| MseI | TTAA | 4 cut(s) | 78, 411, 678, 849 |
| MslI | CAYNNNNRTG | 1 cut(s) | 614 |
| Msp20I | TGGCCA | 1 cut(s) | 1122 |
| MspI | CCGG | 4 cut(s) | 24, 51, 428, 1230 |
| MspR9I | CCNGG | 2 cut(s) | 428, 697 |
| MunI | CAATTG | 1 cut(s) | 120 |
| Mva1269I | GAATGC | 3 cut(s) | 639, 1415, 1451 |
| MvaI | CCWGG | 1 cut(s) | 697 |
| MvnI | CGCG | 1 cut(s) | 113 |
| NciI | CCSGG | 1 cut(s) | 428 |
| NdeII | GATC | 7 cut(s) | 746, 784, 867, 964, 976, 1288, 1363 |
| NlaIII | CATG | 5 cut(s) | 21, 613, 828, 913, 1370 |
| NlaIV | GGNNCC | 6 cut(s) | 55, 376, 647, 936, 1247, 1460 |
| NmeAIII | GCCGAG | 2 cut(s) | 1088, 1274 |
| NspI | RCATGY | 1 cut(s) | 613 |
| PagI | TCATGA | 2 cut(s) | 909, 1366 |
| PctI | GAATGC | 3 cut(s) | 639, 1415, 1451 |
| PdmI | GAANNNNTTC | 2 cut(s) | 666, 773 |
| PfeI | GAWTC | 5 cut(s) | 153, 364, 599, 1029, 1226 |
| PkrI | GCNGC | 6 cut(s) | 10, 190, 280, 357, 1327, 1330 |
| PleI | GAGTC | 3 cut(s) | 322, 950, 1259 |
| PpsI | GAGTC | 3 cut(s) | 322, 950, 1259 |
| PpuMI | RGGWCCY | 1 cut(s) | 374 |
| PsiI | TTATAA | 2 cut(s) | 818, 1283 |
| Psp124BI | GAGCTC | 1 cut(s) | 505 |
| Psp5II | RGGWCCY | 1 cut(s) | 374 |
| Psp6I | CCWGG | 1 cut(s) | 695 |
| PspFI | CCCAGC | 1 cut(s) | 1354 |
| PspGI | CCWGG | 1 cut(s) | 695 |
| PspN4I | GGNNCC | 6 cut(s) | 55, 376, 647, 936, 1247, 1460 |
| PspPI | GGNCC | 5 cut(s) | 374, 780, 1070, 1219, 1246 |
| PspPPI | RGGWCCY | 1 cut(s) | 374 |
| PsuI | RGATCY | 2 cut(s) | 964, 1288 |
| RsaI | GTAC | 5 cut(s) | 641, 647, 936, 1077, 1208 |
| RsaNI | GTAC | 5 cut(s) | 640, 646, 935, 1076, 1207 |
| RseI | CAYNNNNRTG | 1 cut(s) | 614 |
| SacI | GAGCTC | 1 cut(s) | 505 |
| SaqAI | TTAA | 4 cut(s) | 78, 411, 678, 849 |
| SatI | GCNGC | 6 cut(s) | 9, 189, 279, 356, 1326, 1329 |
| Sau3AI | GATC | 7 cut(s) | 746, 784, 867, 964, 976, 1288, 1363 |
| Sau96I | GGNCC | 5 cut(s) | 374, 780, 1070, 1219, 1246 |
| SchI | GAGTC | 3 cut(s) | 323, 950, 1260 |
| ScrFI | CCNGG | 2 cut(s) | 428, 697 |
| SduI | GDGCHC | 6 cut(s) | 107, 185, 505, 765, 928, 1176 |
| SfaNI | GCATC | 3 cut(s) | 239, 1288, 1431 |
| SinI | GGWCC | 3 cut(s) | 374, 780, 1070 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 614 |
| Sse9I | AATT | 8 cut(s) | 80, 120, 173, 482, 675, 725, 820, 1240 |
| SsiI | CCGC | 6 cut(s) | 9, 67, 128, 281, 335, 637 |
| SspMI | CTAG | 5 cut(s) | 447, 881, 1023, 1145, 1412 |
| SstI | GAGCTC | 1 cut(s) | 505 |
| StyD4I | CCNGG | 2 cut(s) | 426, 695 |
| StyI | CCWWGG | 2 cut(s) | 446, 1261 |
| TaiI | ACGT | 2 cut(s) | 442, 838 |
| TaqI | TCGA | 3 cut(s) | 194, 499, 1224 |
| TaqII | GACCGA | 1 cut(s) | 797 |
| TasI | AATT | 8 cut(s) | 80, 120, 173, 482, 675, 725, 820, 1240 |
| TatI | WGTACW | 2 cut(s) | 1075, 1206 |
| TauI | GCSGC | 1 cut(s) | 11 |
| TfiI | GAWTC | 5 cut(s) | 153, 364, 599, 1029, 1226 |
| Tru1I | TTAA | 4 cut(s) | 78, 411, 678, 849 |
| Tru9I | TTAA | 4 cut(s) | 78, 411, 678, 849 |
| TscAI | CASTG | 7 cut(s) | 480, 588, 621, 661, 928, 1102, 1326 |
| TseI | GCWGC | 5 cut(s) | 188, 278, 355, 1325, 1328 |
| TspRI | CASTG | 7 cut(s) | 480, 588, 621, 661, 928, 1102, 1326 |
| VpaK11BI | GGWCC | 3 cut(s) | 374, 780, 1070 |
| XapI | RAATTY | 3 cut(s) | 80, 173, 820 |
| XceI | RCATGY | 1 cut(s) | 613 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1064 |
| XmaJI | CCTAGG | 1 cut(s) | 446 |
| XmiI | GTMKAC | 1 cut(s) | 442 |
| XmnI | GAANNNNTTC | 2 cut(s) | 666, 773 |
| XspI | CTAG | 5 cut(s) | 447, 881, 1023, 1145, 1412 |