MD15G1061700.v1.1

Catalyzes the ferrous insertion into protoporphyrin IX

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
4143168 .. 4146446
3279 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1061700.v1.1.491

Sequence Viewer

Length: 1413 bp
ATGGACGCCGCCGCATGCTCTCGTGTTCTTCCTCAGATCAACCTCTCCCATTCGGATCATAGATTATCCACTGGTAGGTCGGGACCTGCCTCTTTCCGTTCATCCAAGCGATTGCTAGTTCCGAAACAGCTCACAGTTTCTTGCTCTACACCGATTGATAAGGGAAATGACATGTTTGGAATATCACATTGTTCTAAGAAAAACCCTGTGGGGGAAGTATTATGCCCTGCTGGTGTATGCACTTATGGTGGGACTGCTGTAGAGTCTCATTCCCATGCTGCGGAAGAGAAGGTTGGAGTGCTGCTTCTGAATCTTGGAGGACCCGAGACGCTTAATGATGTTCAGCCGTTTTTGTTCAATCTTTTTGCCGACCCGGATATCATTCGTCTCCCAAGGTTGTTTCGGTTTCTCCAGCAACCATTGGCGAAATTAATTTCTGTACTTCGAGCTCCAAAAAGCAAAGAAGGTTATGCTGCTATAGGAGGTGGTTCACCATTGCGTAAAATTACAAATGAGCAGGCAAATGAACTCAGAAAGACTCTGGAATCAAAGGACTTGCCTGTTAATGTCTATGTGGGAATGCGTTATTGGTACCCATTTACTGAGGAAGCAGTTCAGCAAATTAAGAAAGACAGAATAACCAGGCTTGTTGTCCTGCCTCTATATCCTCAGTTCTCTATCTCTACAACTGGATCAAGCGTTCGTGTGCTCGAGGATATTTTCAGGAAAGACGCCTACCTATCAAGGATGCCTGTTTCTATTATAAACTCATGGTATCAACGTGAAGGCTATATTAAGTCAATGGCCGACTTGATTTCCAAAGAACTAGAAAGTTTTTCTGAGCCTGCAGAGGTCATGATATTCTTCAGTGCCCACGGAGTGCCGCTCAGTTATGTGGAGGATGCTGGAGATCCTTACAAAGATCAAATGGAAGAGTGCATCTTCTTAATAATGAAAGAGTTGAAATCTCGAGGAATCAACAATGAACATACTCTTGCTTACCAGAGCCGAGTTGGTCCTGTGCAATGGTTAAAGCCCTACACTGATGAAGTTCTTGTTGAGCTTGGCCAGAAAGGCGTGAAAAGTCTCCTAGCTGTTCCAGTCAGCTTTGTGAGCGAGCACATAGAGACTCTTGAAGAAATTGATATGGAGTACAGGGAATTGGCCCTCGAATCTGGCATTGAGAATTGGGGTCGAGTCCCTGCCCTTGGTTGCACTCCTTCGTTTATAACAGACCTCGCAGATGCCGTGATAGAAGCCGTACCACTTGCAACAGCCATGTCAACCCCACAAACTACCTCAGAAGTAGCCGATCACGACCCTGTGAGATACGCTATCAAGATGTTCTTTGGTCCCTTTTTGGCTTTCATTTTGTTCTTTTCTCCGATGATAATGGCATTCAGGAACACCTGA

Protein Analysis

471

Amino Acids

52.32

Weight (kDa)

5.82

Isoelectric Point (pI)

46.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ferrochelatase PF00762 97 - 419 1.2e-111 Ferrochelatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 764, 1229
Acc36I ACCTGC 1 cut(s) 94
Acc65I GGTACC 1 cut(s) 591
AccB1I GGYRCC 1 cut(s) 591
AccBSI CCGCTC 1 cut(s) 886
AciI CCGC 4 cut(s) 9, 12, 281, 884
AclWI GGATC 3 cut(s) 63, 700, 905
AcoI YGGCCR 2 cut(s) 804, 1066
AcuI CTGAAG 1 cut(s) 850
AcyI GRCGYC 2 cut(s) 6, 732
AdeI CACNNNGTG 1 cut(s) 880
AfaI GTAC 4 cut(s) 441, 593, 1154, 1263
AfiI CCNNNNNNNGG 4 cut(s) 75, 211, 280, 1208
AflIII ACRYGT 1 cut(s) 171
AgsI TTSAA 3 cut(s) 358, 964, 1136
AjnI CCWGG 1 cut(s) 641
AjuI GAANNNNNNNTTGG 4 cut(s) 276, 308, 571, 603
AloI GAACNNNNNNTCC 2 cut(s) 684, 716
AluBI AGCT 5 cut(s) 130, 449, 1063, 1094, 1107
AluI AGCT 5 cut(s) 130, 449, 1063, 1094, 1107
Alw21I GWGCWC 3 cut(s) 451, 711, 1122
Alw26I GTCTC 5 cut(s) 270, 320, 392, 1091, 1121
AlwI GGATC 3 cut(s) 63, 700, 905
Ama87I CYCGRG 3 cut(s) 323, 710, 969
AoxI GGCC 3 cut(s) 804, 1066, 1164
ApeKI GCWGC 3 cut(s) 278, 301, 473
AseI ATTAAT 1 cut(s) 431
Asp700I GAANNNNTTC 1 cut(s) 612
Asp718I GGTACC 1 cut(s) 591
AspS9I GGNCC 5 cut(s) 83, 320, 1016, 1165, 1352
AsuC2I CCSGG 1 cut(s) 374
AsuHPI GGTGA 1 cut(s) 483
AvaI CYCGRG 3 cut(s) 323, 710, 969
AvaII GGWCC 4 cut(s) 83, 320, 1016, 1352
BaeGI GKGCMC 1 cut(s) 874
BalI TGGCCA 1 cut(s) 1068
BanI GGYRCC 1 cut(s) 591
BanII GRGCYC 1 cut(s) 451
BauI CACGAG 1 cut(s) 21
Bbv12I GWGCWC 3 cut(s) 451, 711, 1122
BbvI GCAGC 3 cut(s) 265, 288, 460
BceAI ACGGC 3 cut(s) 331, 1232, 1244
BciT130I CCWGG 1 cut(s) 643
BcnI CCSGG 1 cut(s) 374
BcoDI GTCTC 5 cut(s) 270, 320, 392, 1091, 1121
BfaI CTAG 3 cut(s) 116, 827, 1091
BfmI CTRYAG 3 cut(s) 258, 477, 846
BfuAI ACCTGC 1 cut(s) 94
BglI GCCNNNNNGGC 1 cut(s) 1074
BisI GCNGC 6 cut(s) 9, 12, 279, 302, 474, 884
BlsI GCNGC 6 cut(s) 10, 13, 280, 303, 475, 885
Bme1390I CCNGG 2 cut(s) 374, 643
Bme18I GGWCC 4 cut(s) 83, 320, 1016, 1352
BmeT110I CYCGRG 3 cut(s) 323, 710, 969
BmgT120I GGNCC 5 cut(s) 83, 320, 1016, 1165, 1352
BmiI GGNNCC 4 cut(s) 84, 322, 593, 1354
BmrFI CCNGG 2 cut(s) 374, 643
BmsI GCATC 4 cut(s) 738, 892, 948, 1234
BplI GAGNNNNNCTC 2 cut(s) 870, 902
BpmI CTGGAG 2 cut(s) 395, 927
BpuMI CCSGG 1 cut(s) 374
BsaHI GRCGYC 2 cut(s) 6, 732
BsaJI CCNNGG 3 cut(s) 392, 874, 1207
Bsc4I CCNNNNNNNGG 4 cut(s) 75, 211, 280, 1208
Bse1I ACTGG 3 cut(s) 76, 694, 1100
Bse3DI GCAATG 2 cut(s) 494, 1031
BseBI CCWGG 1 cut(s) 643
BseDI CCNNGG 3 cut(s) 392, 874, 1207
BseGI GGATG 3 cut(s) 101, 753, 907
BseLI CCNNNNNNNGG 4 cut(s) 75, 211, 280, 1208
BseMI GCAATG 2 cut(s) 494, 1031
BseMII CTCAG 7 cut(s) 47, 544, 594, 683, 831, 901, 1314
BseNI ACTGG 3 cut(s) 76, 694, 1100
BseSI GKGCMC 1 cut(s) 874
BseXI GCAGC 3 cut(s) 265, 288, 460
BshFI GGCC 3 cut(s) 806, 1068, 1166
BshNI GGYRCC 1 cut(s) 591
BsiHKAI GWGCWC 3 cut(s) 451, 711, 1122
BsiHKCI CYCGRG 3 cut(s) 323, 710, 969
BsiSI CCGG 1 cut(s) 374
BslFI GGGAC 4 cut(s) 96, 265, 1184, 1338
BslI CCNNNNNNNGG 4 cut(s) 75, 211, 280, 1208
BsmAI GTCTC 5 cut(s) 270, 320, 392, 1091, 1121
BsmBI CGTCTC 2 cut(s) 320, 392
BsmFI GGGAC 4 cut(s) 96, 265, 1184, 1338
BsmI GAATGC 2 cut(s) 585, 1397
BsnI GGCC 3 cut(s) 806, 1068, 1166
BsoBI CYCGRG 3 cut(s) 323, 710, 969
Bsp1286I GDGCHC 4 cut(s) 451, 711, 874, 1122
Bsp143I GATC 6 cut(s) 36, 55, 692, 910, 922, 1312
BspACI CCGC 4 cut(s) 9, 12, 281, 884
BspANI GGCC 3 cut(s) 806, 1068, 1166
BspCNI CTCAG 7 cut(s) 46, 543, 595, 682, 832, 900, 1313
BspHI TCATGA 1 cut(s) 855
BspLI GGNNCC 4 cut(s) 84, 322, 593, 1354
BspMAI CTGCAG 1 cut(s) 850
BspMI ACCTGC 1 cut(s) 94
BspPI GGATC 3 cut(s) 63, 700, 905
BspT107I GGYRCC 1 cut(s) 591
BsrBI CCGCTC 1 cut(s) 886
BsrDI GCAATG 2 cut(s) 494, 1031
BsrI ACTGG 3 cut(s) 76, 694, 1100
BssECI CCNNGG 3 cut(s) 392, 874, 1207
BssMI GATC 6 cut(s) 36, 55, 692, 910, 922, 1312
BssNI GRCGYC 2 cut(s) 6, 732
BssSI CACGAG 1 cut(s) 21
BssT1I CCWWGG 2 cut(s) 392, 1207
Bst2BI CACGAG 1 cut(s) 21
Bst2UI CCWGG 1 cut(s) 643
Bst4CI ACNGT 1 cut(s) 136
Bst6I CTCTTC 2 cut(s) 279, 927
BstACI GRCGYC 2 cut(s) 6, 732
BstC8I GCNNGC 4 cut(s) 16, 519, 846, 1118
BstDEI CTNAG 8 cut(s) 33, 195, 530, 603, 669, 840, 887, 1300
BstDSI CCRYGG 1 cut(s) 874
BstF5I GGATG 3 cut(s) 101, 753, 907
BstKTI GATC 6 cut(s) 39, 58, 695, 913, 925, 1315
BstMAI GTCTC 5 cut(s) 270, 320, 392, 1091, 1121
BstMBI GATC 6 cut(s) 36, 55, 692, 910, 922, 1312
BstMWI GCNNNNNNNGC 2 cut(s) 1074, 1113
BstNI CCWGG 1 cut(s) 643
BstNSI RCATGY 2 cut(s) 18, 175
BstSCI CCNGG 2 cut(s) 372, 641
BstSFI CTRYAG 3 cut(s) 258, 477, 846
BstSLI GKGCMC 1 cut(s) 874
BstV1I GCAGC 3 cut(s) 265, 288, 460
BstX2I RGATCY 1 cut(s) 910
BstYI RGATCY 1 cut(s) 910
BsuRI GGCC 3 cut(s) 806, 1068, 1166
BtgI CCRYGG 1 cut(s) 874
BtsCI GGATG 3 cut(s) 101, 753, 907
BtsIMutI CAGTG 3 cut(s) 69, 874, 1041
BveI ACCTGC 1 cut(s) 94
Cac8I GCNNGC 4 cut(s) 16, 519, 846, 1118
CciI TCATGA 1 cut(s) 855
Cfr13I GGNCC 5 cut(s) 83, 320, 1016, 1165, 1352
CseI GACGC 3 cut(s) 14, 337, 740
Csp6I GTAC 4 cut(s) 440, 592, 1153, 1262
CviAII CATG 6 cut(s) 15, 172, 275, 771, 856, 1279
CviQI GTAC 4 cut(s) 440, 592, 1153, 1262
DdeI CTNAG 8 cut(s) 33, 195, 530, 603, 669, 840, 887, 1300
DpnI GATC 6 cut(s) 38, 57, 694, 912, 924, 1314
DpnII GATC 6 cut(s) 36, 55, 692, 910, 922, 1312
DraIII CACNNNGTG 1 cut(s) 880
EaeI YGGCCR 2 cut(s) 804, 1066
Eam1104I CTCTTC 2 cut(s) 279, 927
EarI CTCTTC 2 cut(s) 279, 927
Ecl136II GAGCTC 1 cut(s) 449
Eco130I CCWWGG 2 cut(s) 392, 1207
Eco24I GRGCYC 1 cut(s) 451
Eco32I GATATC 1 cut(s) 379
Eco47I GGWCC 4 cut(s) 83, 320, 1016, 1352
Eco53kI GAGCTC 1 cut(s) 449
Eco57I CTGAAG 1 cut(s) 850
Eco88I CYCGRG 3 cut(s) 323, 710, 969
EcoICRI GAGCTC 1 cut(s) 449
EcoO109I RGGNCCY 2 cut(s) 83, 320
EcoRII CCWGG 1 cut(s) 641
EcoRV GATATC 1 cut(s) 379
EcoT14I CCWWGG 2 cut(s) 392, 1207
EcoT38I GRGCYC 1 cut(s) 451
ErhI CCWWGG 2 cut(s) 392, 1207
Esp3I CGTCTC 2 cut(s) 320, 392
FaeI CATG 6 cut(s) 18, 175, 278, 774, 859, 1282
FalI AAGNNNNNCTT 2 cut(s) 1331, 1363
FaqI GGGAC 4 cut(s) 96, 265, 1184, 1338
FatI CATG 6 cut(s) 14, 171, 274, 770, 855, 1278
Fnu4HI GCNGC 6 cut(s) 9, 12, 279, 302, 474, 884
FokI GGATG 3 cut(s) 88, 760, 914
FriOI GRGCYC 1 cut(s) 451
Fsp4HI GCNGC 6 cut(s) 9, 12, 279, 302, 474, 884
FspBI CTAG 3 cut(s) 116, 827, 1091
GluI GCNGC 6 cut(s) 9, 12, 279, 302, 474, 884
GsuI CTGGAG 2 cut(s) 395, 927
HaeIII GGCC 3 cut(s) 806, 1068, 1166
HapII CCGG 1 cut(s) 374
HgaI GACGC 3 cut(s) 14, 337, 740
Hin1I GRCGYC 2 cut(s) 6, 732
Hin1II CATG 6 cut(s) 18, 175, 278, 774, 859, 1282
HincII GTYRAC 1 cut(s) 1284
HindII GTYRAC 1 cut(s) 1284
HinfI GANTC 8 cut(s) 263, 310, 538, 545, 975, 1129, 1172, 1197
HpaII CCGG 1 cut(s) 374
HphI GGTGA 1 cut(s) 483
Hpy166II GTNNAC 2 cut(s) 491, 1284
Hpy188I TCNGA 8 cut(s) 36, 55, 123, 309, 533, 841, 1303, 1386
Hpy188III TCNNGA 9 cut(s) 81, 542, 724, 856, 969, 1133, 1316, 1339, 1402
Hpy8I GTNNAC 2 cut(s) 491, 1284
HpyAV CCTTC 4 cut(s) 283, 458, 779, 1230
HpyCH4III ACNGT 1 cut(s) 136
HpyCH4IV ACGT 1 cut(s) 781
HpyCH4V TGCA 6 cut(s) 240, 848, 939, 1024, 1215, 1271
HpyF10VI GCNNNNNNNGC 2 cut(s) 1074, 1113
HpyF3I CTNAG 8 cut(s) 33, 195, 530, 603, 669, 840, 887, 1300
HpySE526I ACGT 1 cut(s) 781
Hsp92I GRCGYC 2 cut(s) 6, 732
Hsp92II CATG 6 cut(s) 18, 175, 278, 774, 859, 1282
KpnI GGTACC 1 cut(s) 595
Kzo9I GATC 6 cut(s) 36, 55, 692, 910, 922, 1312
LmnI GCTCC 1 cut(s) 454
Lsp1109I GCAGC 3 cut(s) 265, 288, 460
LweI GCATC 4 cut(s) 738, 892, 948, 1234
MaeI CTAG 3 cut(s) 116, 827, 1091
MaeII ACGT 1 cut(s) 781
MalI GATC 6 cut(s) 38, 57, 694, 912, 924, 1314
MbiI CCGCTC 1 cut(s) 886
MboI GATC 6 cut(s) 36, 55, 692, 910, 922, 1312
MboII GAAGA 6 cut(s) 20, 296, 856, 934, 944, 1148
MflI RGATCY 1 cut(s) 910
MhlI GDGCHC 4 cut(s) 451, 711, 874, 1122
MlsI TGGCCA 1 cut(s) 1068
MluCI AATT 7 cut(s) 428, 432, 504, 621, 1140, 1160, 1186
MluNI TGGCCA 1 cut(s) 1068
MlyI GAGTC 4 cut(s) 272, 532, 1123, 1206
MmeI TCCRAC 1 cut(s) 274
Mox20I TGGCCA 1 cut(s) 1068
MroXI GAANNNNTTC 1 cut(s) 612
MscI TGGCCA 1 cut(s) 1068
MseI TTAA 7 cut(s) 333, 431, 564, 624, 795, 947, 1031
MslI CAYNNNNRTG 1 cut(s) 273
Msp20I TGGCCA 1 cut(s) 1068
MspI CCGG 1 cut(s) 374
MspR9I CCNGG 2 cut(s) 374, 643
Mva1269I GAATGC 2 cut(s) 585, 1397
MvaI CCWGG 1 cut(s) 643
MwoI GCNNNNNNNGC 2 cut(s) 1074, 1113
NciI CCSGG 1 cut(s) 374
NdeII GATC 6 cut(s) 36, 55, 692, 910, 922, 1312
NlaIII CATG 6 cut(s) 18, 175, 278, 774, 859, 1282
NlaIV GGNNCC 4 cut(s) 84, 322, 593, 1354
NmeAIII GCCGAG 1 cut(s) 1034
NspI RCATGY 2 cut(s) 18, 175
PaeI GCATGC 1 cut(s) 18
PaeR7I CTCGAG 2 cut(s) 710, 969
PagI TCATGA 1 cut(s) 855
PciI ACATGT 1 cut(s) 171
PcsI WCGNNNNNNNCGW 1 cut(s) 1245
PctI GAATGC 2 cut(s) 585, 1397
PdmI GAANNNNTTC 1 cut(s) 612
PfeI GAWTC 4 cut(s) 310, 545, 975, 1172
PkrI GCNGC 6 cut(s) 10, 13, 280, 303, 475, 885
PleI GAGTC 4 cut(s) 271, 532, 1123, 1205
PpsI GAGTC 4 cut(s) 271, 532, 1123, 1205
PpuMI RGGWCCY 2 cut(s) 83, 320
PscI ACATGT 1 cut(s) 171
PshBI ATTAAT 1 cut(s) 431
PsiI TTATAA 2 cut(s) 764, 1229
Psp124BI GAGCTC 1 cut(s) 451
Psp5II RGGWCCY 2 cut(s) 83, 320
Psp6I CCWGG 1 cut(s) 641
PspGI CCWGG 1 cut(s) 641
PspN4I GGNNCC 4 cut(s) 84, 322, 593, 1354
PspPI GGNCC 5 cut(s) 83, 320, 1016, 1165, 1352
PspPPI RGGWCCY 2 cut(s) 83, 320
PspXI VCTCGAGB 1 cut(s) 710
PstI CTGCAG 1 cut(s) 850
PsuI RGATCY 1 cut(s) 910
RsaI GTAC 4 cut(s) 441, 593, 1154, 1263
RsaNI GTAC 4 cut(s) 440, 592, 1153, 1262
RseI CAYNNNNRTG 1 cut(s) 273
SacI GAGCTC 1 cut(s) 451
SaqAI TTAA 7 cut(s) 333, 431, 564, 624, 795, 947, 1031
SatI GCNGC 6 cut(s) 9, 12, 279, 302, 474, 884
Sau3AI GATC 6 cut(s) 36, 55, 692, 910, 922, 1312
Sau96I GGNCC 5 cut(s) 83, 320, 1016, 1165, 1352
SchI GAGTC 4 cut(s) 272, 532, 1123, 1206
ScrFI CCNGG 2 cut(s) 374, 643
SduI GDGCHC 4 cut(s) 451, 711, 874, 1122
SfaNI GCATC 4 cut(s) 738, 892, 948, 1234
SfcI CTRYAG 3 cut(s) 258, 477, 846
Sfr274I CTCGAG 2 cut(s) 710, 969
SinI GGWCC 4 cut(s) 83, 320, 1016, 1352
SlaI CTCGAG 2 cut(s) 710, 969
SmiMI CAYNNNNRTG 1 cut(s) 273
SmlI CTYRAG 2 cut(s) 710, 969
SmoI CTYRAG 2 cut(s) 710, 969
SphI GCATGC 1 cut(s) 18
Sse9I AATT 7 cut(s) 428, 432, 504, 621, 1140, 1160, 1186
SsiI CCGC 4 cut(s) 9, 12, 281, 884
SspMI CTAG 3 cut(s) 116, 827, 1091
SstI GAGCTC 1 cut(s) 451
StyD4I CCNGG 2 cut(s) 372, 641
StyI CCWWGG 2 cut(s) 392, 1207
TaaI ACNGT 1 cut(s) 136
TaiI ACGT 1 cut(s) 784
TaqI TCGA 5 cut(s) 445, 711, 970, 1170, 1195
TasI AATT 7 cut(s) 428, 432, 504, 621, 1140, 1160, 1186
TatI WGTACW 2 cut(s) 439, 1152
TauI GCSGC 3 cut(s) 11, 14, 886
TfiI GAWTC 4 cut(s) 310, 545, 975, 1172
Tru1I TTAA 7 cut(s) 333, 431, 564, 624, 795, 947, 1031
Tru9I TTAA 7 cut(s) 333, 431, 564, 624, 795, 947, 1031
TscAI CASTG 3 cut(s) 76, 874, 1048
TseI GCWGC 3 cut(s) 278, 301, 473
TspDTI ATGAA 6 cut(s) 90, 540, 968, 999, 1062, 1357
TspGWI ACGGA 2 cut(s) 86, 891
TspRI CASTG 3 cut(s) 76, 874, 1048
VpaK11BI GGWCC 4 cut(s) 83, 320, 1016, 1352
VspI ATTAAT 1 cut(s) 431
XceI RCATGY 2 cut(s) 18, 175
XcmI CCANNNNNNNNNTGG 1 cut(s) 1010
XhoI CTCGAG 2 cut(s) 710, 969
XmnI GAANNNNTTC 1 cut(s) 612
XspI CTAG 3 cut(s) 116, 827, 1091
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.