Rh6DG496400

Catalyzes the ferrous insertion into protoporphyrin IX

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0004323
Physical Location & Seq
Forward (+)
65401045 .. 65404789
3745 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG496400.1

Sequence Viewer

Length: 1257 bp
ATGGTGTTTGGGGCATCGCATTGCGAGAAGAAAAGCCCTGTTGGGGAGGCATTGTGTGTTGCTGCGGGTGTATGCACTTATGGTGGGACTGCTGTGGAGTCTCATCACTCCCACATTGCGGAAGAGAAGGTTGGAGTGCTGCTCCTGAATCTTGGAGGACCCGAGACGCTTGATGATGTTCAGCCGTTTCTGTTTAATCTATTCGCTGACCCGGATATCATACGCCTACCTAGGGCGTTTAGGTTTCTTCAGAAGCCACTGGCAAAATTGATTTCTGTGCTTCGAGCTCCTAAGAGCAAAGAAGGGTATGCGTCAATTGGAGGTGGTTCGCCCTTGCGTAAGATAACAGATGAGCAGGCAAATGCACTGAAAATGGCTTTGGAATCAAAGGACATGCCGGTGAATGTCTATGTGGGAATGCGGTACTGGTACCCGTTCACTGAGGAAGCAGTTCATCAAATTAAGAGGGACAGAATAACCAGGCTTGTTGTCCTGCCTCTATATCCTCAATTCTCTATCTCTACAACTGGATCAAGCGTTCGTGTGCTCCAGAAGATTTTCAGGAACGATCCATATCTATCAAGGTTGCCTGTTTCAGTTATAAATTCATGGTATCAACGTGAAGGTTATATTAAGTCAATGGCTGACTTGATCTCAAAAGAGATAGAGAGTTTTTCTGAGCCTGCACAGGTCATGATATTCTTCAGTGCCCATGGGGTACCACTCAGTTATGTGAAGGACTCTGGAGATCCATACAAAGATCAAATGGAGGAGTGTATCTTTCTAATAATGAAAGAGTTGAAAGCTAGAGGAATCAATAATGAACATACTCTTGCCTACCAGAGCCGAGTTGGTCCTGTACAATGGTTGAAGCCATACACTGATGAAGTTCTTGTTGAGCTTGGCCAGAAAGGAGTAAAAAGTCTTCTAGCTGTTCCAGTCAGCTTTGTGAGTGAGCACATAGAAACTCTTGAAGAGATAGATATGGAGTACAAGGAGTTGGCCCTCGAATCTGGCATTGAGAATTGGGGCCGAGTCCCTGCCCTTGGCCTTACCCCTTCATTTATAACAGATCTGGCAGATGCAGTTATAGAGGCTCTACCACTGGCAGCAGCCACTTCAACCCCAAAGACTACCCCAGCAGTTGATCATGACCCTATGAGATGGGCTATCAAAATGTTCTTTGGTTCATTTCTAGCATTCATTTTGTTCTTTTCACCAAAGATGCTAATGGCATTCAGGAACCACCTGATTTGA

Protein Analysis

418

Amino Acids

46.69

Weight (kDa)

6.1

Isoelectric Point (pI)

44.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ferrochelatase PF00762 43 - 366 1.5e-111 Ferrochelatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 602, 1067
Acc65I GGTACC 2 cut(s) 429, 718
AccB1I GGYRCC 2 cut(s) 429, 718
AciI CCGC 3 cut(s) 65, 119, 421
AclWI GGATC 3 cut(s) 538, 563, 743
AcoI YGGCCR 1 cut(s) 904
AcsI RAATTY 1 cut(s) 604
AcuI CTGAAG 2 cut(s) 233, 688
AfaI GTAC 5 cut(s) 425, 431, 720, 861, 992
AfiI CCNNNNNNNGG 4 cut(s) 43, 118, 232, 1046
AgsI TTSAA 4 cut(s) 802, 871, 974, 1122
AjnI CCWGG 1 cut(s) 479
AjuI GAANNNNNNNTTGG 4 cut(s) 114, 146, 362, 394
AloI GAACNNNNNNTCC 2 cut(s) 522, 554
AluBI AGCT 5 cut(s) 287, 806, 901, 932, 945
AluI AGCT 5 cut(s) 287, 806, 901, 932, 945
Alw21I GWGCWC 3 cut(s) 289, 549, 960
Alw26I GTCTC 2 cut(s) 105, 158
AlwI GGATC 3 cut(s) 538, 563, 743
Ama87I CYCGRG 1 cut(s) 161
AoxI GGCC 4 cut(s) 904, 1002, 1030, 1048
ApeKI GCWGC 4 cut(s) 62, 139, 1109, 1112
ApoI RAATTY 1 cut(s) 604
Asp700I GAANNNNTTC 2 cut(s) 450, 557
Asp718I GGTACC 2 cut(s) 429, 718
AspA2I CCTAGG 1 cut(s) 230
AspS9I GGNCC 4 cut(s) 158, 854, 1003, 1030
AsuC2I CCSGG 1 cut(s) 212
AsuHPI GGTGA 2 cut(s) 412, 1209
AvaI CYCGRG 1 cut(s) 161
AvaII GGWCC 2 cut(s) 158, 854
AvrII CCTAGG 1 cut(s) 230
BaeGI GKGCMC 1 cut(s) 712
BalI TGGCCA 1 cut(s) 906
BanI GGYRCC 2 cut(s) 429, 718
BanII GRGCYC 1 cut(s) 289
BarI GAAGNNNNNNTAC 2 cut(s) 909, 941
BbsI GAAGAC 1 cut(s) 917
Bbv12I GWGCWC 3 cut(s) 289, 549, 960
BbvI GCAGC 4 cut(s) 49, 126, 1121, 1124
BccI CCATC 1 cut(s) 1158
BceAI ACGGC 1 cut(s) 169
BciT130I CCWGG 1 cut(s) 481
BclI TGATCA 1 cut(s) 1147
BcnI CCSGG 1 cut(s) 212
BcoDI GTCTC 2 cut(s) 105, 158
BfaI CTAG 4 cut(s) 231, 807, 929, 1196
BglII AGATCT 1 cut(s) 1072
BisI GCNGC 4 cut(s) 63, 140, 1110, 1113
BlnI CCTAGG 1 cut(s) 230
BlsI GCNGC 4 cut(s) 64, 141, 1111, 1114
Bme1390I CCNGG 2 cut(s) 212, 481
Bme18I GGWCC 2 cut(s) 158, 854
BmeT110I CYCGRG 1 cut(s) 161
BmgT120I GGNCC 4 cut(s) 158, 854, 1003, 1030
BmiI GGNNCC 5 cut(s) 160, 431, 720, 1031, 1244
BmrFI CCNGG 2 cut(s) 212, 481
BmsI GCATC 3 cut(s) 23, 1072, 1215
BpiI GAAGAC 1 cut(s) 917
BplI GAGNNNNNCTC 2 cut(s) 126, 158
BpmI CTGGAG 2 cut(s) 533, 765
BpuMI CCSGG 1 cut(s) 212
BsaBI GATNNNNATC 1 cut(s) 573
BsaJI CCNNGG 3 cut(s) 230, 712, 1045
BsaXI ACNNNNNCTCC 2 cut(s) 38, 68
Bsc4I CCNNNNNNNGG 4 cut(s) 43, 118, 232, 1046
Bse118I RCCGGY 1 cut(s) 397
Bse1I ACTGG 5 cut(s) 264, 431, 532, 938, 1110
Bse3DI GCAATG 2 cut(s) 19, 114
Bse8I GATNNNNATC 1 cut(s) 573
BseBI CCWGG 1 cut(s) 481
BseDI CCNNGG 3 cut(s) 230, 712, 1045
BseJI GATNNNNATC 1 cut(s) 573
BseLI CCNNNNNNNGG 4 cut(s) 43, 118, 232, 1046
BseMI GCAATG 2 cut(s) 19, 114
BseMII CTCAG 3 cut(s) 432, 669, 739
BseNI ACTGG 5 cut(s) 264, 431, 532, 938, 1110
BseRI GAGGAG 1 cut(s) 785
BseSI GKGCMC 1 cut(s) 712
BseXI GCAGC 4 cut(s) 49, 126, 1121, 1124
BseYI CCCAGC 1 cut(s) 1138
BsgI GTGCAG 1 cut(s) 669
BshFI GGCC 4 cut(s) 906, 1004, 1032, 1050
BshNI GGYRCC 2 cut(s) 429, 718
BsiHKAI GWGCWC 3 cut(s) 289, 549, 960
BsiHKCI CYCGRG 1 cut(s) 161
BsiSI CCGG 2 cut(s) 212, 398
BslFI GGGAC 3 cut(s) 100, 482, 1022
BslI CCNNNNNNNGG 4 cut(s) 43, 118, 232, 1046
BsmAI GTCTC 2 cut(s) 105, 158
BsmBI CGTCTC 1 cut(s) 158
BsmFI GGGAC 3 cut(s) 100, 482, 1022
BsmI GAATGC 3 cut(s) 423, 1199, 1235
BsnI GGCC 4 cut(s) 906, 1004, 1032, 1050
BsoBI CYCGRG 1 cut(s) 161
Bsp1286I GDGCHC 4 cut(s) 289, 549, 712, 960
Bsp1407I TGTACA 1 cut(s) 859
Bsp143I GATC 7 cut(s) 530, 568, 651, 748, 760, 1072, 1147
Bsp19I CCATGG 1 cut(s) 712
BspACI CCGC 3 cut(s) 65, 119, 421
BspANI GGCC 4 cut(s) 906, 1004, 1032, 1050
BspCNI CTCAG 3 cut(s) 433, 670, 738
BspHI TCATGA 2 cut(s) 693, 1150
BspLI GGNNCC 5 cut(s) 160, 431, 720, 1031, 1244
BspPI GGATC 3 cut(s) 538, 563, 743
BspT107I GGYRCC 2 cut(s) 429, 718
BsrDI GCAATG 2 cut(s) 19, 114
BsrFI RCCGGY 1 cut(s) 397
BsrGI TGTACA 1 cut(s) 859
BsrI ACTGG 5 cut(s) 264, 431, 532, 938, 1110
BssAI RCCGGY 1 cut(s) 397
BssECI CCNNGG 3 cut(s) 230, 712, 1045
BssMI GATC 7 cut(s) 530, 568, 651, 748, 760, 1072, 1147
BssT1I CCWWGG 3 cut(s) 230, 712, 1045
Bst2UI CCWGG 1 cut(s) 481
Bst6I CTCTTC 2 cut(s) 117, 969
BstAUI TGTACA 1 cut(s) 859
BstC8I GCNNGC 2 cut(s) 357, 684
BstDEI CTNAG 4 cut(s) 291, 441, 678, 725
BstDSI CCRYGG 1 cut(s) 712
BstKTI GATC 7 cut(s) 533, 571, 654, 751, 763, 1075, 1150
BstMAI GTCTC 2 cut(s) 105, 158
BstMBI GATC 7 cut(s) 530, 568, 651, 748, 760, 1072, 1147
BstNI CCWGG 1 cut(s) 481
BstNSI RCATGY 1 cut(s) 397
BstSCI CCNGG 2 cut(s) 210, 479
BstSLI GKGCMC 1 cut(s) 712
BstV1I GCAGC 4 cut(s) 49, 126, 1121, 1124
BstV2I GAAGAC 1 cut(s) 917
BstX2I RGATCY 2 cut(s) 748, 1072
BstYI RGATCY 2 cut(s) 748, 1072
BsuRI GGCC 4 cut(s) 906, 1004, 1032, 1050
BtgI CCRYGG 1 cut(s) 712
BtsIMutI CAGTG 6 cut(s) 257, 365, 438, 712, 879, 1103
Cac8I GCNNGC 2 cut(s) 357, 684
CciI TCATGA 2 cut(s) 693, 1150
Cfr10I RCCGGY 1 cut(s) 397
Cfr13I GGNCC 4 cut(s) 158, 854, 1003, 1030
CseI GACGC 2 cut(s) 175, 300
Csp6I GTAC 5 cut(s) 424, 430, 719, 860, 991
CspCI CAANNNNNGTGG 1 cut(s) 1235
CviAII CATG 5 cut(s) 394, 609, 694, 713, 1151
CviQI GTAC 5 cut(s) 424, 430, 719, 860, 991
DdeI CTNAG 4 cut(s) 291, 441, 678, 725
DpnI GATC 7 cut(s) 532, 570, 653, 750, 762, 1074, 1149
DpnII GATC 7 cut(s) 530, 568, 651, 748, 760, 1072, 1147
EaeI YGGCCR 1 cut(s) 904
Eam1104I CTCTTC 2 cut(s) 117, 969
EarI CTCTTC 2 cut(s) 117, 969
Ecl136II GAGCTC 1 cut(s) 287
Eco130I CCWWGG 3 cut(s) 230, 712, 1045
Eco24I GRGCYC 1 cut(s) 289
Eco32I GATATC 1 cut(s) 217
Eco47I GGWCC 2 cut(s) 158, 854
Eco53kI GAGCTC 1 cut(s) 287
Eco57I CTGAAG 2 cut(s) 233, 688
Eco88I CYCGRG 1 cut(s) 161
EcoICRI GAGCTC 1 cut(s) 287
EcoO109I RGGNCCY 1 cut(s) 158
EcoRII CCWGG 1 cut(s) 479
EcoRV GATATC 1 cut(s) 217
EcoT14I CCWWGG 3 cut(s) 230, 712, 1045
EcoT38I GRGCYC 1 cut(s) 289
ErhI CCWWGG 3 cut(s) 230, 712, 1045
Esp3I CGTCTC 1 cut(s) 158
FaeI CATG 5 cut(s) 397, 612, 697, 716, 1154
FaqI GGGAC 3 cut(s) 100, 482, 1022
FatI CATG 5 cut(s) 393, 608, 693, 712, 1150
FauI CCCGC 1 cut(s) 58
FbaI TGATCA 1 cut(s) 1147
Fnu4HI GCNGC 4 cut(s) 63, 140, 1110, 1113
FriOI GRGCYC 1 cut(s) 289
Fsp4HI GCNGC 4 cut(s) 63, 140, 1110, 1113
FspBI CTAG 4 cut(s) 231, 807, 929, 1196
GluI GCNGC 4 cut(s) 63, 140, 1110, 1113
GsaI CCCAGC 1 cut(s) 1142
GsuI CTGGAG 2 cut(s) 533, 765
HaeIII GGCC 4 cut(s) 906, 1004, 1032, 1050
HapII CCGG 2 cut(s) 212, 398
HgaI GACGC 2 cut(s) 175, 300
Hin1II CATG 5 cut(s) 397, 612, 697, 716, 1154
HinfI GANTC 7 cut(s) 98, 148, 383, 740, 813, 1010, 1035
HpaII CCGG 2 cut(s) 212, 398
HphI GGTGA 2 cut(s) 412, 1209
Hpy166II GTNNAC 1 cut(s) 438
Hpy188I TCNGA 2 cut(s) 252, 679
Hpy188III TCNNGA 8 cut(s) 145, 550, 562, 694, 744, 971, 1151, 1240
Hpy8I GTNNAC 1 cut(s) 438
HpyAV CCTTC 5 cut(s) 121, 296, 617, 730, 1068
HpyCH4IV ACGT 1 cut(s) 619
HpyCH4V TGCA 4 cut(s) 75, 365, 686, 1085
HpyF3I CTNAG 4 cut(s) 291, 441, 678, 725
HpySE526I ACGT 1 cut(s) 619
Hsp92II CATG 5 cut(s) 397, 612, 697, 716, 1154
KpnI GGTACC 2 cut(s) 433, 722
Ksp22I TGATCA 1 cut(s) 1147
Kzo9I GATC 7 cut(s) 530, 568, 651, 748, 760, 1072, 1147
LmnI GCTCC 3 cut(s) 147, 292, 552
Lsp1109I GCAGC 4 cut(s) 49, 126, 1121, 1124
LweI GCATC 3 cut(s) 23, 1072, 1215
MaeI CTAG 4 cut(s) 231, 807, 929, 1196
MaeII ACGT 1 cut(s) 619
MalI GATC 7 cut(s) 532, 570, 653, 750, 762, 1074, 1149
MboI GATC 7 cut(s) 530, 568, 651, 748, 760, 1072, 1147
MboII GAAGA 7 cut(s) 40, 134, 239, 565, 694, 917, 986
MfeI CAATTG 1 cut(s) 315
MflI RGATCY 2 cut(s) 748, 1072
MhlI GDGCHC 4 cut(s) 289, 549, 712, 960
MlsI TGGCCA 1 cut(s) 906
MluCI AATT 6 cut(s) 266, 315, 459, 509, 604, 1024
MluNI TGGCCA 1 cut(s) 906
MlyI GAGTC 3 cut(s) 107, 734, 1044
MmeI TCCRAC 1 cut(s) 112
Mox20I TGGCCA 1 cut(s) 906
MroXI GAANNNNTTC 2 cut(s) 450, 557
MscI TGGCCA 1 cut(s) 906
MseI TTAA 3 cut(s) 195, 462, 633
MslI CAYNNNNRTG 1 cut(s) 398
Msp20I TGGCCA 1 cut(s) 906
MspI CCGG 2 cut(s) 212, 398
MspR9I CCNGG 2 cut(s) 212, 481
MunI CAATTG 1 cut(s) 315
Mva1269I GAATGC 3 cut(s) 423, 1199, 1235
MvaI CCWGG 1 cut(s) 481
NciI CCSGG 1 cut(s) 212
NcoI CCATGG 1 cut(s) 712
NdeII GATC 7 cut(s) 530, 568, 651, 748, 760, 1072, 1147
NlaIII CATG 5 cut(s) 397, 612, 697, 716, 1154
NlaIV GGNNCC 5 cut(s) 160, 431, 720, 1031, 1244
NmeAIII GCCGAG 2 cut(s) 872, 1058
NspI RCATGY 1 cut(s) 397
PagI TCATGA 2 cut(s) 693, 1150
PctI GAATGC 3 cut(s) 423, 1199, 1235
PdmI GAANNNNTTC 2 cut(s) 450, 557
PfeI GAWTC 4 cut(s) 148, 383, 813, 1010
PkrI GCNGC 4 cut(s) 64, 141, 1111, 1114
PleI GAGTC 3 cut(s) 106, 734, 1043
PpsI GAGTC 3 cut(s) 106, 734, 1043
PpuMI RGGWCCY 1 cut(s) 158
PsiI TTATAA 2 cut(s) 602, 1067
Psp124BI GAGCTC 1 cut(s) 289
Psp5II RGGWCCY 1 cut(s) 158
Psp6I CCWGG 1 cut(s) 479
PspFI CCCAGC 1 cut(s) 1138
PspGI CCWGG 1 cut(s) 479
PspN4I GGNNCC 5 cut(s) 160, 431, 720, 1031, 1244
PspPI GGNCC 4 cut(s) 158, 854, 1003, 1030
PspPPI RGGWCCY 1 cut(s) 158
PsuI RGATCY 2 cut(s) 748, 1072
RsaI GTAC 5 cut(s) 425, 431, 720, 861, 992
RsaNI GTAC 5 cut(s) 424, 430, 719, 860, 991
RseI CAYNNNNRTG 1 cut(s) 398
SacI GAGCTC 1 cut(s) 289
SaqAI TTAA 3 cut(s) 195, 462, 633
SatI GCNGC 4 cut(s) 63, 140, 1110, 1113
Sau3AI GATC 7 cut(s) 530, 568, 651, 748, 760, 1072, 1147
Sau96I GGNCC 4 cut(s) 158, 854, 1003, 1030
SchI GAGTC 3 cut(s) 107, 734, 1044
ScrFI CCNGG 2 cut(s) 212, 481
SduI GDGCHC 4 cut(s) 289, 549, 712, 960
SfaNI GCATC 3 cut(s) 23, 1072, 1215
SinI GGWCC 2 cut(s) 158, 854
SmiMI CAYNNNNRTG 1 cut(s) 398
Sse9I AATT 6 cut(s) 266, 315, 459, 509, 604, 1024
SsiI CCGC 3 cut(s) 65, 119, 421
SspMI CTAG 4 cut(s) 231, 807, 929, 1196
SstI GAGCTC 1 cut(s) 289
StyD4I CCNGG 2 cut(s) 210, 479
StyI CCWWGG 3 cut(s) 230, 712, 1045
TaiI ACGT 1 cut(s) 622
TaqI TCGA 2 cut(s) 283, 1008
TasI AATT 6 cut(s) 266, 315, 459, 509, 604, 1024
TatI WGTACW 2 cut(s) 859, 990
TfiI GAWTC 4 cut(s) 148, 383, 813, 1010
Tru1I TTAA 3 cut(s) 195, 462, 633
Tru9I TTAA 3 cut(s) 195, 462, 633
TscAI CASTG 6 cut(s) 264, 372, 445, 712, 886, 1110
TseI GCWGC 4 cut(s) 62, 139, 1109, 1112
TspDTI ATGAA 8 cut(s) 443, 597, 806, 837, 900, 1050, 1179, 1192
TspRI CASTG 6 cut(s) 264, 372, 445, 712, 886, 1110
VpaK11BI GGWCC 2 cut(s) 158, 854
XapI RAATTY 1 cut(s) 604
XceI RCATGY 1 cut(s) 397
XcmI CCANNNNNNNNNTGG 1 cut(s) 848
XmaJI CCTAGG 1 cut(s) 230
XmnI GAANNNNTTC 2 cut(s) 450, 557
XspI CTAG 4 cut(s) 231, 807, 929, 1196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.