Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0007642

Physical Location & Seq

Genomic Coordinates Reverse (-)

16709140 .. 16712884

Gene Structure 3745 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1153600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1293 bp

ATGGCGTACCACAACCACCTCTCCCAGGACCTCCCTCTCCACCACTTCACCGACCAAACCCACCACCAGCACCAGCAATATCAATCGGACCAACCCGACCCGAACTCCAAGCCCCCAGAGCCCCACCACTCATTTCAGCCCGCCCCCAATTGGCTCAACTCCGCCCTCCTCCGCAACTTCACCAACACCGACACCAACCCAACCAACAGTAACAACGCAAACAACAACGGTGGCGGCGTCTCCAATTTCCTCAACCTCCACGTCACCGCCTCCGACTCCGCCGCCTCCCAAGCATCCAACCAATGGCTCTCCCAGTCCCACCGCCCGATCCTCCACCGCAACCACAGCGACGTTATTGATGACGTCACCGTTGCCGGCGACTCCATGATCGCCGCGGCGTTGTCCCACGACTCCGCCGACCTCAAGCCCGACAGCATCCTCAACAAGAACGAAGGCGGAGGAGGAGACGGCGGGGTCATGAATTGGCAGAACGCGAGACACAAAGCCGAAATTTTGGCGCACCCGCTGTACGAGCCGCTGCTGTCGGCGCACGTGGCGTGCCTGCGGATCGCGACGCCGGTGGACCAGCTGCCGAGGATCGACGCCCAGCTGGCTCAGTCGCAGAATGTGGTGGCGAAGTACTCCGCCTTGGGGAACGGCATGGTCGGCGATGACAAGGAGCTTGATCAGTTCATGAGGAATTATGTTTTGTTGCTTTGTTCTTTCAAAGAACAACTGCAACAACACGTCCGGGTGCATGCAATGGAAGCAGTAATGGCTTGCTGGGAGATTGAACAATCACTTCAAAGCTTAACAGGAGTTTCCCCCGGTGAAGGAACGAGTGCTACAATGTCGGATGACGAAGATGACCAAGTAGATAGTGATGCAAACTTGTTTGATGAAGGTATGGAGGGTCATGACAGCATGGGATTCGGCCCCCTTATCCCGACAGAGAGCGAAAGGTCCTTGATGGAGCGCGTGAGGCAGGAGTTGAAGCATGAACTGAAACAGGGTTACAAGGAGAAAATCGTAGACATAAGAGAGGAGATTTTGCGCAAGAGAAGAGCCGGAAAACTTCCTGGTGACACCACCTCTGTCCTAAAAGCTTGGTGGCAATCACATTCCAAATGGCCATATCCAACTGAGGAAGACAAGGCTAGGTTGGTACAGGAAACCGGTTTGCAATTGAAGCAGATAAACAATTGGTTCATCAATCAGCGGAAGAGGAACTGGCACAGCAATCCTTCTACCTCCACGGTTTTGAAGAGCAAGCGCAAAAGGTATACCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0008150 GO:0009314 GO:0009416 GO:0009593 GO:0009628 GO:0009719 GO:0009720 GO:0009722 GO:0009723 GO:0009725 GO:0009726 GO:0009727 GO:0009735 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032870 GO:0034097 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071345 GO:0071369 GO:0071495 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ELK Homeobox_KN KNOX1 KNOX2

Protein Analysis

431

Amino Acids

48.31

Weight (kDa)

5.95

Isoelectric Point (pI)

47.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KNOX1	PF03790	168 - 208	3.3e-17	KNOX1 domain
KNOX2	PF03791	222 - 272	5.4e-19	KNOX2 domain
ELK	PF03789	330 - 351	7.4e-07	ELK domain
Homeobox_KN	PF05920	370 - 409	9.5e-19	Homeobox KN domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007642)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11060 AT5G25220 AT5G25220
fragaria_vesca	FvH4_2g28300 FvH4_2g28300
malus_domestica	MD08G1153600.v1.1 MD15G1130800.v1.1
prunus_persica	Prupe.1G486200_v2.0.a1 Prupe.1G486200_v2.0.a1
pyrus_communis	pycom08g13300 pycom15g11790
rosa_chinensis	RchiOBHm_Chr6g0297211
rosa_laevigata	RLG00000011621
rosa_multiflora	Rmu_co8344329.1_g000001 Rmu_sc0013249.1_g000001 Rmu_sc0029393.1_g000001
rosa_roxburghii	Rroxscaffold_7G00170780
rosa_rugosa	Rorug06G0269900 Rorug06G0270000
rosa_samantha	Rh6AG381000 Rh6BG389200 Rh6CG394400 Rh6DG381100
rosa_wichuraiana	Rw6G033180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	473
AatII	GACGTC	1 cut(s)	366
Acc16I	TGCGCA	1 cut(s)	1055
AccB7I	CCANNNNNTGG	1 cut(s)	303
AccI	GTMKAC	2 cut(s)	1032, 1283
AccII	CGCG	4 cut(s)	395, 494, 572, 978
AclWI	GGATC	3 cut(s)	322, 575, 605
AcoI	YGGCCR	1 cut(s)	1130
AcsI	RAATTY	1 cut(s)	510
AcvI	CACGTG	1 cut(s)	553
AcyI	GRCGYC	4 cut(s)	237, 363, 575, 603
AfaI	GTAC	4 cut(s)	8, 530, 641, 1167
AfiI	CCNNNNNNNGG	5 cut(s)	25, 150, 303, 651, 833
AflIII	ACRYGT	1 cut(s)	745
AgeI	ACCGGT	1 cut(s)	1175
AgsI	TTSAA	6 cut(s)	727, 794, 806, 994, 1189, 1264
AjiI	CACGTC	2 cut(s)	262, 748
AjnI	CCWGG	2 cut(s)	24, 1078
AluBI	AGCT	5 cut(s)	589, 610, 682, 810, 1106
AluI	AGCT	5 cut(s)	589, 610, 682, 810, 1106
Alw26I	GTCTC	3 cut(s)	244, 459, 490
AlwI	GGATC	3 cut(s)	322, 575, 605
AoxI	GGCC	2 cut(s)	934, 1130
ApeKI	GCWGC	2 cut(s)	538, 589
ApoI	RAATTY	1 cut(s)	510
AsiGI	ACCGGT	1 cut(s)	1175
AspLEI	GCGC	5 cut(s)	520, 550, 978, 1056, 1275
AspS9I	GGNCC	5 cut(s)	28, 88, 583, 935, 963
AsuC2I	CCSGG	2 cut(s)	752, 828
AsuHPI	GGTGA	6 cut(s)	40, 172, 256, 358, 842, 1094
AvaII	GGWCC	4 cut(s)	28, 88, 583, 963
BalI	TGGCCA	1 cut(s)	1132
BanII	GRGCYC	1 cut(s)	123
BbrPI	CACGTG	1 cut(s)	553
BbsI	GAAGAC	1 cut(s)	1155
BbvI	GCAGC	2 cut(s)	525, 576
BccI	CCATC	1 cut(s)	964
BceAI	ACGGC	2 cut(s)	484, 673
BcgI	CGANNNNNNTGC	2 cut(s)	913, 947
BciT130I	CCWGG	2 cut(s)	26, 1080
BclI	TGATCA	1 cut(s)	685
BcnI	CCSGG	2 cut(s)	752, 828
BcoDI	GTCTC	3 cut(s)	244, 459, 490
BfaI	CTAG	1 cut(s)	1158
BglI	GCCNNNNNGGC	1 cut(s)	611
BisI	GCNGC	7 cut(s)	235, 282, 393, 396, 536, 539, 590
BlsI	GCNGC	7 cut(s)	236, 283, 394, 397, 537, 540, 591
BmcAI	AGTACT	1 cut(s)	641
Bme1390I	CCNGG	4 cut(s)	26, 752, 828, 1080
Bme18I	GGWCC	4 cut(s)	28, 88, 583, 963
BmgBI	CACGTC	2 cut(s)	262, 748
BmgT120I	GGNCC	5 cut(s)	28, 88, 583, 935, 963
BmiI	GGNNCC	1 cut(s)	937
BmrFI	CCNGG	4 cut(s)	26, 752, 828, 1080
BmrI	ACTGGG	1 cut(s)	307
BmsI	GCATC	3 cut(s)	302, 444, 874
BmuI	ACTGGG	1 cut(s)	307
BpiI	GAAGAC	1 cut(s)	1155
BpuEI	CTTGAG	1 cut(s)	407
BpuMI	CCSGG	2 cut(s)	752, 828
BsaAI	YACGTR	1 cut(s)	553
BsaHI	GRCGYC	4 cut(s)	237, 363, 575, 603
BsaJI	CCNNGG	6 cut(s)	24, 393, 593, 648, 826, 1254
BsaWI	WCCGGW	1 cut(s)	1175
BsaXI	ACNNNNNCTCC	4 cut(s)	5, 35, 89, 119
Bsc4I	CCNNNNNNNGG	5 cut(s)	25, 150, 303, 651, 833
Bse118I	RCCGGY	3 cut(s)	374, 577, 1175
Bse1I	ACTGG	2 cut(s)	313, 1235
Bse3DI	GCAATG	1 cut(s)	768
BseBI	CCWGG	2 cut(s)	26, 1080
BseDI	CCNNGG	6 cut(s)	24, 393, 593, 648, 826, 1254
BseGI	GGATG	3 cut(s)	293, 435, 862
BseLI	CCNNNNNNNGG	5 cut(s)	25, 150, 303, 651, 833
BseMI	GCAATG	1 cut(s)	768
BseMII	CTCAG	2 cut(s)	629, 1134
BseNI	ACTGG	2 cut(s)	313, 1235
BseRI	GAGGAG	4 cut(s)	158, 474, 477, 1058
BseXI	GCAGC	2 cut(s)	525, 576
BseYI	CCCAGC	2 cut(s)	606, 783
Bsh1236I	CGCG	4 cut(s)	395, 494, 572, 978
BshFI	GGCC	2 cut(s)	936, 1132
BshTI	ACCGGT	1 cut(s)	1175
BsiSI	CCGG	6 cut(s)	375, 578, 751, 828, 1068, 1176
BslFI	GGGAC	2 cut(s)	301, 388
BslI	CCNNNNNNNGG	5 cut(s)	25, 150, 303, 651, 833
BsmAI	GTCTC	3 cut(s)	244, 459, 490
BsmBI	CGTCTC	2 cut(s)	244, 459
BsmFI	GGGAC	2 cut(s)	301, 388
BsnI	GGCC	2 cut(s)	936, 1132
Bsp1286I	GDGCHC	1 cut(s)	123
Bsp143I	GATC	5 cut(s)	327, 387, 567, 597, 685
Bsp68I	TCGCGA	1 cut(s)	572
BspANI	GGCC	2 cut(s)	936, 1132
BspCNI	CTCAG	2 cut(s)	628, 1135
BspFNI	CGCG	4 cut(s)	395, 494, 572, 978
BspHI	TCATGA	3 cut(s)	477, 693, 916
BspLI	GGNNCC	1 cut(s)	937
BspPI	GGATC	3 cut(s)	322, 575, 605
BspQI	GCTCTTC	2 cut(s)	1057, 1259
BsrDI	GCAATG	1 cut(s)	768
BsrFI	RCCGGY	3 cut(s)	374, 577, 1175
BsrI	ACTGG	2 cut(s)	313, 1235
BssAI	RCCGGY	3 cut(s)	374, 577, 1175
BssECI	CCNNGG	6 cut(s)	24, 393, 593, 648, 826, 1254
BssMI	GATC	5 cut(s)	327, 387, 567, 597, 685
BssNAI	GTATAC	1 cut(s)	1284
BssNI	GRCGYC	4 cut(s)	237, 363, 575, 603
BssT1I	CCWWGG	1 cut(s)	648
Bst1107I	GTATAC	1 cut(s)	1284
Bst2UI	CCWGG	2 cut(s)	26, 1080
Bst4CI	ACNGT	4 cut(s)	209, 230, 370, 1258
Bst6I	CTCTTC	3 cut(s)	1057, 1217, 1259
BstACI	GRCGYC	4 cut(s)	237, 363, 575, 603
BstBAI	YACGTR	1 cut(s)	553
BstC8I	GCNNGC	8 cut(s)	141, 376, 559, 563, 612, 759, 781, 1271
BstDEI	CTNAG	2 cut(s)	615, 1143
BstDSI	CCRYGG	2 cut(s)	393, 1254
BstENI	CCTNNNNNAGG	1 cut(s)	23
BstF5I	GGATG	3 cut(s)	293, 435, 862
BstFNI	CGCG	4 cut(s)	395, 494, 572, 978
BstHHI	GCGC	5 cut(s)	520, 550, 978, 1056, 1275
BstKTI	GATC	5 cut(s)	330, 390, 570, 600, 688
BstMAI	GTCTC	3 cut(s)	244, 459, 490
BstMBI	GATC	5 cut(s)	327, 387, 567, 597, 685
BstNI	CCWGG	2 cut(s)	26, 1080
BstNSI	RCATGY	1 cut(s)	761
BstSCI	CCNGG	4 cut(s)	24, 750, 826, 1078
BstUI	CGCG	4 cut(s)	395, 494, 572, 978
BstV1I	GCAGC	2 cut(s)	525, 576
BstV2I	GAAGAC	1 cut(s)	1155
BstZ17I	GTATAC	1 cut(s)	1284
BsuRI	GGCC	2 cut(s)	936, 1132
BtgI	CCRYGG	2 cut(s)	393, 1254
BtgZI	GCGATG	1 cut(s)	684
BtrI	CACGTC	2 cut(s)	262, 748
BtsCI	GGATG	3 cut(s)	293, 435, 862
BtuMI	TCGCGA	1 cut(s)	572
Cac8I	GCNNGC	8 cut(s)	141, 376, 559, 563, 612, 759, 781, 1271
CciI	TCATGA	3 cut(s)	477, 693, 916
CfoI	GCGC	5 cut(s)	520, 550, 978, 1056, 1275
Cfr10I	RCCGGY	3 cut(s)	374, 577, 1175
Cfr13I	GGNCC	5 cut(s)	28, 88, 583, 935, 963
Cfr42I	CCGCGG	1 cut(s)	396
CseI	GACGC	3 cut(s)	226, 583, 611
Csp6I	GTAC	4 cut(s)	7, 529, 640, 1166
CspAI	ACCGGT	1 cut(s)	1175
CspCI	CAANNNNNGTGG	2 cut(s)	211, 246
CviAII	CATG	8 cut(s)	385, 478, 661, 694, 758, 917, 925, 998
CviQI	GTAC	4 cut(s)	7, 529, 640, 1166
DdeI	CTNAG	2 cut(s)	615, 1143
DpnI	GATC	5 cut(s)	329, 389, 569, 599, 687
DpnII	GATC	5 cut(s)	327, 387, 567, 597, 685
DrdI	GACNNNNNNGTC	1 cut(s)	473
DseDI	GACNNNNNNGTC	1 cut(s)	473
EaeI	YGGCCR	1 cut(s)	1130
Eam1104I	CTCTTC	3 cut(s)	1057, 1217, 1259
EarI	CTCTTC	3 cut(s)	1057, 1217, 1259
EciI	GGCGGA	5 cut(s)	151, 268, 403, 471, 634
Eco130I	CCWWGG	1 cut(s)	648
Eco24I	GRGCYC	1 cut(s)	123
Eco47I	GGWCC	4 cut(s)	28, 88, 583, 963
Eco72I	CACGTG	1 cut(s)	553
EcoNI	CCTNNNNNAGG	1 cut(s)	23
EcoO109I	RGGNCCY	2 cut(s)	28, 963
EcoRII	CCWGG	2 cut(s)	24, 1078
EcoT14I	CCWWGG	1 cut(s)	648
EcoT38I	GRGCYC	1 cut(s)	123
ErhI	CCWWGG	1 cut(s)	648
Esp3I	CGTCTC	2 cut(s)	244, 459
FaeI	CATG	8 cut(s)	388, 481, 664, 697, 761, 920, 928, 1001
FaqI	GGGAC	2 cut(s)	301, 388
FatI	CATG	8 cut(s)	384, 477, 660, 693, 757, 916, 924, 997
FauI	CCCGC	3 cut(s)	148, 464, 531
FbaI	TGATCA	1 cut(s)	685
FblI	GTMKAC	2 cut(s)	1032, 1283
Fnu4HI	GCNGC	7 cut(s)	235, 282, 393, 396, 536, 539, 590
FokI	GGATG	3 cut(s)	280, 422, 869
FriOI	GRGCYC	1 cut(s)	123
Fsp4HI	GCNGC	7 cut(s)	235, 282, 393, 396, 536, 539, 590
FspBI	CTAG	1 cut(s)	1158
FspI	TGCGCA	1 cut(s)	1055
GlaI	GCGC	5 cut(s)	519, 549, 977, 1055, 1274
GluI	GCNGC	7 cut(s)	235, 282, 393, 396, 536, 539, 590
GsaI	CCCAGC	2 cut(s)	610, 787
HaeIII	GGCC	2 cut(s)	936, 1132
HapII	CCGG	6 cut(s)	375, 578, 751, 828, 1068, 1176
HgaI	GACGC	3 cut(s)	226, 583, 611
HhaI	GCGC	5 cut(s)	520, 550, 978, 1056, 1275
Hin1I	GRCGYC	4 cut(s)	237, 363, 575, 603
Hin1II	CATG	8 cut(s)	388, 481, 664, 697, 761, 920, 928, 1001
Hin6I	GCGC	5 cut(s)	518, 548, 976, 1054, 1273
HinP1I	GCGC	5 cut(s)	518, 548, 976, 1054, 1273
HindIII	AAGCTT	2 cut(s)	808, 1104
HinfI	GANTC	4 cut(s)	275, 380, 410, 930
HpaII	CCGG	6 cut(s)	375, 578, 751, 828, 1068, 1176
HphI	GGTGA	6 cut(s)	40, 172, 256, 358, 842, 1094
Hpy166II	GTNNAC	3 cut(s)	583, 1033, 1284
Hpy188I	TCNGA	3 cut(s)	88, 274, 856
Hpy188III	TCNNGA	5 cut(s)	478, 571, 694, 917, 946
Hpy8I	GTNNAC	3 cut(s)	583, 1033, 1284
Hpy99I	CGWCG	3 cut(s)	353, 577, 605
HpyAV	CCTTC	4 cut(s)	446, 827, 896, 1254
HpyCH4III	ACNGT	4 cut(s)	209, 230, 370, 1258
HpyCH4IV	ACGT	5 cut(s)	261, 351, 363, 552, 747
HpyCH4V	TGCA	5 cut(s)	739, 757, 761, 887, 1183
HpyF3I	CTNAG	2 cut(s)	615, 1143
HpySE526I	ACGT	5 cut(s)	261, 351, 363, 552, 747
Hsp92I	GRCGYC	4 cut(s)	237, 363, 575, 603
Hsp92II	CATG	8 cut(s)	388, 481, 664, 697, 761, 920, 928, 1001
HspAI	GCGC	5 cut(s)	518, 548, 976, 1054, 1273
KroI	GCCGGC	1 cut(s)	374
KroNI	GCCGGC	1 cut(s)	376
Ksp22I	TGATCA	1 cut(s)	685
KspI	CCGCGG	1 cut(s)	396
Kzo9I	GATC	5 cut(s)	327, 387, 567, 597, 685
LguI	GCTCTTC	2 cut(s)	1057, 1259
LmnI	GCTCC	2 cut(s)	679, 973
Lsp1109I	GCAGC	2 cut(s)	525, 576
LweI	GCATC	3 cut(s)	302, 444, 874
MaeI	CTAG	1 cut(s)	1158
MaeII	ACGT	5 cut(s)	261, 351, 363, 552, 747
MaeIII	GTNAC	5 cut(s)	209, 262, 364, 1013, 1082
MalI	GATC	5 cut(s)	329, 389, 569, 599, 687
MboI	GATC	5 cut(s)	327, 387, 567, 597, 685
MboII	GAAGA	5 cut(s)	875, 1074, 1160, 1234, 1276
MfeI	CAATTG	4 cut(s)	148, 1184, 1201, 1288
MhlI	GDGCHC	1 cut(s)	123
MlsI	TGGCCA	1 cut(s)	1132
MluCI	AATT	8 cut(s)	148, 244, 481, 510, 700, 1184, 1201, 1288
MluNI	TGGCCA	1 cut(s)	1132
MlyI	GAGTC	3 cut(s)	269, 374, 404
MmeI	TCCRAC	4 cut(s)	297, 321, 834, 1163
Mox20I	TGGCCA	1 cut(s)	1132
MroNI	GCCGGC	1 cut(s)	374
MscI	TGGCCA	1 cut(s)	1132
MseI	TTAA	1 cut(s)	812
Msp20I	TGGCCA	1 cut(s)	1132
MspA1I	CMGCKG	6 cut(s)	395, 526, 538, 589, 610, 1219
MspI	CCGG	6 cut(s)	375, 578, 751, 828, 1068, 1176
MspR9I	CCNGG	4 cut(s)	26, 752, 828, 1080
MunI	CAATTG	4 cut(s)	148, 1184, 1201, 1288
MvaI	CCWGG	2 cut(s)	26, 1080
MvnI	CGCG	4 cut(s)	395, 494, 572, 978
NaeI	GCCGGC	1 cut(s)	376
NciI	CCSGG	2 cut(s)	752, 828
NdeII	GATC	5 cut(s)	327, 387, 567, 597, 685
NgoMIV	GCCGGC	1 cut(s)	374
NlaIII	CATG	8 cut(s)	388, 481, 664, 697, 761, 920, 928, 1001
NlaIV	GGNNCC	1 cut(s)	937
NmeAIII	GCCGAG	1 cut(s)	618
NmuCI	GTSAC	3 cut(s)	262, 364, 1082
NruI	TCGCGA	1 cut(s)	572
NsbI	TGCGCA	1 cut(s)	1055
NspI	RCATGY	1 cut(s)	761
PaeI	GCATGC	1 cut(s)	761
PagI	TCATGA	3 cut(s)	477, 693, 916
PciSI	GCTCTTC	2 cut(s)	1057, 1259
PcsI	WCGNNNNNNNCGW	2 cut(s)	234, 414
PdiI	GCCGGC	1 cut(s)	376
PfeI	GAWTC	1 cut(s)	930
PflMI	CCANNNNNTGG	1 cut(s)	303
PinAI	ACCGGT	1 cut(s)	1175
PkrI	GCNGC	7 cut(s)	236, 283, 394, 397, 537, 540, 591
PleI	GAGTC	3 cut(s)	269, 374, 404
PmaCI	CACGTG	1 cut(s)	553
PmlI	CACGTG	1 cut(s)	553
PpsI	GAGTC	3 cut(s)	269, 374, 404
Ppu21I	YACGTR	1 cut(s)	553
PpuMI	RGGWCCY	2 cut(s)	28, 963
Psp5II	RGGWCCY	2 cut(s)	28, 963
Psp6I	CCWGG	2 cut(s)	24, 1078
PspCI	CACGTG	1 cut(s)	553
PspFI	CCCAGC	2 cut(s)	606, 783
PspGI	CCWGG	2 cut(s)	24, 1078
PspN4I	GGNNCC	1 cut(s)	937
PspPI	GGNCC	5 cut(s)	28, 88, 583, 935, 963
PspPPI	RGGWCCY	2 cut(s)	28, 963
PsrI	GAACNNNNNNTAC	2 cut(s)	829, 861
PvuII	CAGCTG	2 cut(s)	589, 610
RruI	TCGCGA	1 cut(s)	572
RsaI	GTAC	4 cut(s)	8, 530, 641, 1167
RsaNI	GTAC	4 cut(s)	7, 529, 640, 1166
SacII	CCGCGG	1 cut(s)	396
SapI	GCTCTTC	2 cut(s)	1057, 1259
SaqAI	TTAA	1 cut(s)	812
SatI	GCNGC	7 cut(s)	235, 282, 393, 396, 536, 539, 590
Sau3AI	GATC	5 cut(s)	327, 387, 567, 597, 685
Sau96I	GGNCC	5 cut(s)	28, 88, 583, 935, 963
ScaI	AGTACT	1 cut(s)	641
SchI	GAGTC	3 cut(s)	269, 374, 404
ScrFI	CCNGG	4 cut(s)	26, 752, 828, 1080
SduI	GDGCHC	1 cut(s)	123
SfaNI	GCATC	3 cut(s)	302, 444, 874
Sfr303I	CCGCGG	1 cut(s)	396
SgrAI	CRCCGGYG	1 cut(s)	577
SgrBI	CCGCGG	1 cut(s)	396
SinI	GGWCC	4 cut(s)	28, 88, 583, 963
SmlI	CTYRAG	1 cut(s)	422
SmoI	CTYRAG	1 cut(s)	422
SphI	GCATGC	1 cut(s)	761
Sse9I	AATT	8 cut(s)	148, 244, 481, 510, 700, 1184, 1201, 1288
SspMI	CTAG	1 cut(s)	1158
StyD4I	CCNGG	4 cut(s)	24, 750, 826, 1078
StyI	CCWWGG	1 cut(s)	648
TaaI	ACNGT	4 cut(s)	209, 230, 370, 1258
TaiI	ACGT	5 cut(s)	264, 354, 366, 555, 750
TaqI	TCGA	1 cut(s)	600
TasI	AATT	8 cut(s)	148, 244, 481, 510, 700, 1184, 1201, 1288
TatI	WGTACW	1 cut(s)	639
TauI	GCSGC	5 cut(s)	237, 284, 395, 398, 538
TfiI	GAWTC	1 cut(s)	930
Tru1I	TTAA	1 cut(s)	812
Tru9I	TTAA	1 cut(s)	812
TseFI	GTSAC	3 cut(s)	262, 364, 1082
TseI	GCWGC	2 cut(s)	538, 589
Tsp45I	GTSAC	3 cut(s)	262, 364, 1082
TspDTI	ATGAA	5 cut(s)	494, 682, 915, 1014, 1198
Van91I	CCANNNNNTGG	1 cut(s)	303
VpaK11BI	GGWCC	4 cut(s)	28, 88, 583, 963
XagI	CCTNNNNNAGG	1 cut(s)	23
XapI	RAATTY	1 cut(s)	510
XceI	RCATGY	1 cut(s)	761
XmiI	GTMKAC	2 cut(s)	1032, 1283
XspI	CTAG	1 cut(s)	1158
ZraI	GACGTC	1 cut(s)	364
ZrmI	AGTACT	1 cut(s)	641

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.