Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0007642

Physical Location & Seq

Genomic Coordinates Reverse (-)

11923194 .. 11926286

Gene Structure 3093 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g13300.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1353 bp

ATGGCGTACCACAACCACCTCTCCCAGGACCTCCCTCTCCACCACTTCACCGACCAAACCCACCACCAGCACCAGCAATATCAATCGGACCAACCCGACCAGAACTCCAAGCCCACCGAGCCCCACCACCCATTTCAGCCCGCCCCCAATTGGCTCAACTCCGCCCTCCTCCGCAACTTCACCAACACCGACACCAACCCAACCAACAGTAACAACGCAAGCAACAACGGTGGCGGCGTCTCTAATTTCCTCAACCTCCACGTCACCGCCTCCGACTCCGCGGCCTCCCAAGCATCCAACCAATGGCTCTCCCAGTCCCACCGCCCGATCCTCCACCGCAACCACAGCGACGTTATTGATGACGTCACAGTTGCCGGCGACTCCATGATCGCCGCGGCGATGTCCCACGACTCCGCCGACCTCAAGCCCAACAGCATCCTCAACAAGAACGACGGCGGAGTCGTCGAGAGCGGCATCCCAGGCGGAGGCGGAGGGGGAGACGGCGGGGTCATGAACTGGCAGAACGCGAGACACAAAGCAGAAATTTTGGCGCACCCGCTGTACGAGCCGCTGCTGTCGGCGCACGTGTCGTGCCTGCGGATCGCGACACCGGTGGACCAGCTGCCGAGGATCGACGCCCAGCTGGCTCAGTCGCAGAATGTGGTGGCGAAGTACTCTGCCTTGGGGAACGGCATGGTCGGCGATGACAAGGAGCTTGATCAGTTCATGAGGAATTATGTTTTGTTGCTTTGTTCTTTCAAAGAACAACTGCAACAACACGTCCGGGTGCATGCAATGGAAGCAGTAATGGCTTGCTGGGAGATTGAACAATCACTTCAAAGCTTAACAGGAGTTTCCCCCGGTGAAGGAACGAGTGCTACAATGTCGGATGACGAAGATGACCAAGTAGATAGTGATGCAAACTTGTTCGATGGAGGTATGGAGGGTCATGACAGCATGGGATTCGGCCCCCTTATCCCGACAGAGAGCGAAAGGTCCTTGATGGAGCGCGTGAGGCAGGAGTTGAAGCATGAACTGAAACAGGGTTACAAGGAGAAAATCGTAGACATAAGAGAGGAGATTTTGCGCAAGAGAAGAGCTGGAAAACTTCCTGGTGACACCACCTCTGTCCTAAAAGCTTGGTGGCAATCACATTCCAAATGGCCATATCCAACTGAGGAAGACAAGGCTAGGTTGGTACAGGAAACCGGTTTGCAATTGAAGCAGATAAACAATTGGTTCATCAATCAGCGGAAGAGGAACTGGCACAGCAATCCTTCTACCTCCACGGTTTTGAAGAGCAAGCGCAAAAGTAATGCAGGTGAAAACAGCAGTGGCGAGCGGTTTATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0008150 GO:0009314 GO:0009416 GO:0009593 GO:0009628 GO:0009719 GO:0009720 GO:0009722 GO:0009723 GO:0009725 GO:0009726 GO:0009727 GO:0009735 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032870 GO:0034097 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071345 GO:0071369 GO:0071495 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ELK Homeobox_KN KNOX1 KNOX2

Protein Analysis

451

Amino Acids

50.0

Weight (kDa)

5.88

Isoelectric Point (pI)

47.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007642)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11060 AT5G25220 AT5G25220
fragaria_vesca	FvH4_2g28300 FvH4_2g28300
malus_domestica	MD08G1153600.v1.1 MD15G1130800.v1.1
prunus_persica	Prupe.1G486200_v2.0.a1 Prupe.1G486200_v2.0.a1
pyrus_communis	pycom08g13300 pycom15g11790
rosa_chinensis	RchiOBHm_Chr6g0297211
rosa_laevigata	RLG00000011621
rosa_multiflora	Rmu_co8344329.1_g000001 Rmu_sc0013249.1_g000001 Rmu_sc0029393.1_g000001
rosa_roxburghii	Rroxscaffold_7G00170780
rosa_rugosa	Rorug06G0269900 Rorug06G0270000
rosa_samantha	Rh6AG381000 Rh6BG389200 Rh6CG394400 Rh6DG381100
rosa_wichuraiana	Rw6G033180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1310
AasI	GACNNNNNNGTC	2 cut(s)	458, 506
AatII	GACGTC	1 cut(s)	366
Acc16I	TGCGCA	1 cut(s)	1088
Acc36I	ACCTGC	1 cut(s)	1310
AccB7I	CCANNNNNTGG	1 cut(s)	303
AccBSI	CCGCTC	2 cut(s)	471, 1342
AccI	GTMKAC	1 cut(s)	1065
AccII	CGCG	5 cut(s)	281, 395, 527, 605, 1011
AclWI	GGATC	3 cut(s)	322, 608, 638
AcoI	YGGCCR	1 cut(s)	1163
AcsI	RAATTY	1 cut(s)	543
AcvI	CACGTG	1 cut(s)	586
AcyI	GRCGYC	3 cut(s)	237, 363, 636
AfaI	GTAC	4 cut(s)	8, 563, 674, 1200
AfiI	CCNNNNNNNGG	5 cut(s)	25, 150, 303, 485, 866
AflIII	ACRYGT	2 cut(s)	585, 778
AgeI	ACCGGT	2 cut(s)	610, 1208
AgsI	TTSAA	6 cut(s)	760, 827, 839, 1027, 1222, 1297
AjiI	CACGTC	2 cut(s)	262, 781
AjnI	CCWGG	3 cut(s)	24, 478, 1111
AluBI	AGCT	6 cut(s)	622, 643, 715, 843, 1100, 1139
AluI	AGCT	6 cut(s)	622, 643, 715, 843, 1100, 1139
Alw26I	GTCTC	3 cut(s)	244, 492, 523
AlwI	GGATC	3 cut(s)	322, 608, 638
AoxI	GGCC	3 cut(s)	282, 967, 1163
ApeKI	GCWGC	2 cut(s)	571, 622
ApoI	RAATTY	1 cut(s)	543
AsiGI	ACCGGT	2 cut(s)	610, 1208
AspLEI	GCGC	5 cut(s)	553, 583, 1011, 1089, 1308
AspS9I	GGNCC	5 cut(s)	28, 88, 616, 968, 996
AsuC2I	CCSGG	2 cut(s)	785, 861
AsuHPI	GGTGA	6 cut(s)	40, 172, 256, 875, 1127, 1334
AvaII	GGWCC	4 cut(s)	28, 88, 616, 996
BalI	TGGCCA	1 cut(s)	1165
BanII	GRGCYC	1 cut(s)	123
BbrPI	CACGTG	1 cut(s)	586
BbsI	GAAGAC	1 cut(s)	1188
BbvI	GCAGC	2 cut(s)	558, 609
BccI	CCATC	2 cut(s)	926, 997
BceAI	ACGGC	3 cut(s)	469, 517, 706
BcgI	CGANNNNNNTGC	2 cut(s)	946, 980
BciT130I	CCWGG	3 cut(s)	26, 480, 1113
BclI	TGATCA	1 cut(s)	718
BcnI	CCSGG	2 cut(s)	785, 861
BcoDI	GTCTC	3 cut(s)	244, 492, 523
BfaI	CTAG	1 cut(s)	1191
BfuAI	ACCTGC	1 cut(s)	1310
BglI	GCCNNNNNGGC	1 cut(s)	644
BisI	GCNGC	8 cut(s)	235, 282, 393, 396, 472, 569, 572, 623
BlsI	GCNGC	8 cut(s)	236, 283, 394, 397, 473, 570, 573, 624
BmcAI	AGTACT	1 cut(s)	674
Bme1390I	CCNGG	5 cut(s)	26, 480, 785, 861, 1113
Bme18I	GGWCC	4 cut(s)	28, 88, 616, 996
BmgBI	CACGTC	2 cut(s)	262, 781
BmgT120I	GGNCC	5 cut(s)	28, 88, 616, 968, 996
BmiI	GGNNCC	1 cut(s)	970
BmrFI	CCNGG	5 cut(s)	26, 480, 785, 861, 1113
BmrI	ACTGGG	1 cut(s)	307
BmsI	GCATC	4 cut(s)	302, 444, 483, 907
BmuI	ACTGGG	1 cut(s)	307
BpiI	GAAGAC	1 cut(s)	1188
BpuEI	CTTGAG	1 cut(s)	407
BpuMI	CCSGG	2 cut(s)	785, 861
BsaAI	YACGTR	1 cut(s)	586
BsaHI	GRCGYC	3 cut(s)	237, 363, 636
BsaJI	CCNNGG	8 cut(s)	24, 279, 393, 478, 626, 681, 859, 1287
BsaWI	WCCGGW	2 cut(s)	610, 1208
BsaXI	ACNNNNNCTCC	4 cut(s)	5, 35, 89, 119
Bsc4I	CCNNNNNNNGG	5 cut(s)	25, 150, 303, 485, 866
Bse118I	RCCGGY	3 cut(s)	374, 610, 1208
Bse1I	ACTGG	3 cut(s)	313, 521, 1268
Bse3DI	GCAATG	1 cut(s)	801
BseBI	CCWGG	3 cut(s)	26, 480, 1113
BseDI	CCNNGG	8 cut(s)	24, 279, 393, 478, 626, 681, 859, 1287
BseGI	GGATG	4 cut(s)	293, 435, 474, 895
BseLI	CCNNNNNNNGG	5 cut(s)	25, 150, 303, 485, 866
BseMI	GCAATG	1 cut(s)	801
BseMII	CTCAG	2 cut(s)	662, 1167
BseNI	ACTGG	3 cut(s)	313, 521, 1268
BseRI	GAGGAG	2 cut(s)	158, 1091
BseXI	GCAGC	2 cut(s)	558, 609
BseYI	CCCAGC	2 cut(s)	639, 816
Bsh1236I	CGCG	5 cut(s)	281, 395, 527, 605, 1011
BshFI	GGCC	3 cut(s)	284, 969, 1165
BshTI	ACCGGT	2 cut(s)	610, 1208
BsiSI	CCGG	5 cut(s)	375, 611, 784, 861, 1209
BslFI	GGGAC	2 cut(s)	301, 388
BslI	CCNNNNNNNGG	5 cut(s)	25, 150, 303, 485, 866
BsmAI	GTCTC	3 cut(s)	244, 492, 523
BsmBI	CGTCTC	2 cut(s)	244, 492
BsmFI	GGGAC	2 cut(s)	301, 388
BsnI	GGCC	3 cut(s)	284, 969, 1165
Bsp1286I	GDGCHC	1 cut(s)	123
Bsp143I	GATC	5 cut(s)	327, 387, 600, 630, 718
Bsp68I	TCGCGA	1 cut(s)	605
BspANI	GGCC	3 cut(s)	284, 969, 1165
BspCNI	CTCAG	2 cut(s)	661, 1168
BspFNI	CGCG	5 cut(s)	281, 395, 527, 605, 1011
BspHI	TCATGA	3 cut(s)	510, 726, 949
BspLI	GGNNCC	1 cut(s)	970
BspMI	ACCTGC	1 cut(s)	1310
BspPI	GGATC	3 cut(s)	322, 608, 638
BspQI	GCTCTTC	2 cut(s)	1090, 1292
BsrBI	CCGCTC	2 cut(s)	471, 1342
BsrDI	GCAATG	1 cut(s)	801
BsrFI	RCCGGY	3 cut(s)	374, 610, 1208
BsrI	ACTGG	3 cut(s)	313, 521, 1268
BssAI	RCCGGY	3 cut(s)	374, 610, 1208
BssECI	CCNNGG	8 cut(s)	24, 279, 393, 478, 626, 681, 859, 1287
BssMI	GATC	5 cut(s)	327, 387, 600, 630, 718
BssNI	GRCGYC	3 cut(s)	237, 363, 636
BssT1I	CCWWGG	1 cut(s)	681
Bst2UI	CCWGG	3 cut(s)	26, 480, 1113
Bst4CI	ACNGT	4 cut(s)	209, 230, 370, 1291
Bst6I	CTCTTC	3 cut(s)	1090, 1250, 1292
BstACI	GRCGYC	3 cut(s)	237, 363, 636
BstBAI	YACGTR	1 cut(s)	586
BstC8I	GCNNGC	9 cut(s)	141, 220, 376, 596, 645, 792, 814, 1304, 1340
BstDEI	CTNAG	2 cut(s)	648, 1176
BstDSI	CCRYGG	3 cut(s)	279, 393, 1287
BstENI	CCTNNNNNAGG	1 cut(s)	23
BstF5I	GGATG	4 cut(s)	293, 435, 474, 895
BstFNI	CGCG	5 cut(s)	281, 395, 527, 605, 1011
BstHHI	GCGC	5 cut(s)	553, 583, 1011, 1089, 1308
BstKTI	GATC	5 cut(s)	330, 390, 603, 633, 721
BstMAI	GTCTC	3 cut(s)	244, 492, 523
BstMBI	GATC	5 cut(s)	327, 387, 600, 630, 718
BstNI	CCWGG	3 cut(s)	26, 480, 1113
BstNSI	RCATGY	1 cut(s)	794
BstSCI	CCNGG	5 cut(s)	24, 478, 783, 859, 1111
BstUI	CGCG	5 cut(s)	281, 395, 527, 605, 1011
BstV1I	GCAGC	2 cut(s)	558, 609
BstV2I	GAAGAC	1 cut(s)	1188
BsuRI	GGCC	3 cut(s)	284, 969, 1165
BtgI	CCRYGG	3 cut(s)	279, 393, 1287
BtgZI	GCGATG	2 cut(s)	413, 717
BtrI	CACGTC	2 cut(s)	262, 781
BtsCI	GGATG	4 cut(s)	293, 435, 474, 895
BtsI	GCAGTG	1 cut(s)	1339
BtsIMutI	CAGTG	1 cut(s)	1339
BtuMI	TCGCGA	1 cut(s)	605
BveI	ACCTGC	1 cut(s)	1310
Cac8I	GCNNGC	9 cut(s)	141, 220, 376, 596, 645, 792, 814, 1304, 1340
CciI	TCATGA	3 cut(s)	510, 726, 949
CfoI	GCGC	5 cut(s)	553, 583, 1011, 1089, 1308
Cfr10I	RCCGGY	3 cut(s)	374, 610, 1208
Cfr13I	GGNCC	5 cut(s)	28, 88, 616, 968, 996
Cfr42I	CCGCGG	2 cut(s)	282, 396
CseI	GACGC	2 cut(s)	226, 644
Csp6I	GTAC	4 cut(s)	7, 562, 673, 1199
CspAI	ACCGGT	2 cut(s)	610, 1208
CspCI	CAANNNNNGTGG	2 cut(s)	211, 246
CviAII	CATG	8 cut(s)	385, 511, 694, 727, 791, 950, 958, 1031
CviQI	GTAC	4 cut(s)	7, 562, 673, 1199
DdeI	CTNAG	2 cut(s)	648, 1176
DpnI	GATC	5 cut(s)	329, 389, 602, 632, 720
DpnII	GATC	5 cut(s)	327, 387, 600, 630, 718
DrdI	GACNNNNNNGTC	2 cut(s)	458, 506
DseDI	GACNNNNNNGTC	2 cut(s)	458, 506
EaeI	YGGCCR	1 cut(s)	1163
Eam1104I	CTCTTC	3 cut(s)	1090, 1250, 1292
EarI	CTCTTC	3 cut(s)	1090, 1250, 1292
EciI	GGCGGA	5 cut(s)	151, 403, 471, 498, 504
Eco130I	CCWWGG	1 cut(s)	681
Eco24I	GRGCYC	1 cut(s)	123
Eco47I	GGWCC	4 cut(s)	28, 88, 616, 996
Eco72I	CACGTG	1 cut(s)	586
EcoNI	CCTNNNNNAGG	1 cut(s)	23
EcoO109I	RGGNCCY	2 cut(s)	28, 996
EcoRII	CCWGG	3 cut(s)	24, 478, 1111
EcoT14I	CCWWGG	1 cut(s)	681
EcoT38I	GRGCYC	1 cut(s)	123
ErhI	CCWWGG	1 cut(s)	681
Esp3I	CGTCTC	2 cut(s)	244, 492
FaeI	CATG	8 cut(s)	388, 514, 697, 730, 794, 953, 961, 1034
FaqI	GGGAC	2 cut(s)	301, 388
FatI	CATG	8 cut(s)	384, 510, 693, 726, 790, 949, 957, 1030
FauI	CCCGC	3 cut(s)	148, 497, 564
FbaI	TGATCA	1 cut(s)	718
FblI	GTMKAC	1 cut(s)	1065
Fnu4HI	GCNGC	8 cut(s)	235, 282, 393, 396, 472, 569, 572, 623
FokI	GGATG	4 cut(s)	280, 422, 461, 902
FriOI	GRGCYC	1 cut(s)	123
Fsp4HI	GCNGC	8 cut(s)	235, 282, 393, 396, 472, 569, 572, 623
FspBI	CTAG	1 cut(s)	1191
FspI	TGCGCA	1 cut(s)	1088
GlaI	GCGC	5 cut(s)	552, 582, 1010, 1088, 1307
GluI	GCNGC	8 cut(s)	235, 282, 393, 396, 472, 569, 572, 623
GsaI	CCCAGC	2 cut(s)	643, 820
HaeIII	GGCC	3 cut(s)	284, 969, 1165
HapII	CCGG	5 cut(s)	375, 611, 784, 861, 1209
HgaI	GACGC	2 cut(s)	226, 644
HhaI	GCGC	5 cut(s)	553, 583, 1011, 1089, 1308
Hin1I	GRCGYC	3 cut(s)	237, 363, 636
Hin1II	CATG	8 cut(s)	388, 514, 697, 730, 794, 953, 961, 1034
Hin6I	GCGC	5 cut(s)	551, 581, 1009, 1087, 1306
HinP1I	GCGC	5 cut(s)	551, 581, 1009, 1087, 1306
HindIII	AAGCTT	2 cut(s)	841, 1137
HinfI	GANTC	5 cut(s)	275, 380, 410, 459, 963
HpaII	CCGG	5 cut(s)	375, 611, 784, 861, 1209
HphI	GGTGA	6 cut(s)	40, 172, 256, 875, 1127, 1334
Hpy166II	GTNNAC	2 cut(s)	616, 1066
Hpy188I	TCNGA	3 cut(s)	88, 274, 889
Hpy188III	TCNNGA	6 cut(s)	466, 511, 604, 727, 950, 979
Hpy8I	GTNNAC	2 cut(s)	616, 1066
Hpy99I	CGWCG	4 cut(s)	353, 455, 467, 638
HpyAV	CCTTC	2 cut(s)	860, 1287
HpyCH4III	ACNGT	4 cut(s)	209, 230, 370, 1291
HpyCH4IV	ACGT	5 cut(s)	261, 351, 363, 585, 780
HpyCH4V	TGCA	6 cut(s)	772, 790, 794, 920, 1216, 1319
HpyF3I	CTNAG	2 cut(s)	648, 1176
HpySE526I	ACGT	5 cut(s)	261, 351, 363, 585, 780
Hsp92I	GRCGYC	3 cut(s)	237, 363, 636
Hsp92II	CATG	8 cut(s)	388, 514, 697, 730, 794, 953, 961, 1034
HspAI	GCGC	5 cut(s)	551, 581, 1009, 1087, 1306
KroI	GCCGGC	1 cut(s)	374
KroNI	GCCGGC	1 cut(s)	376
Ksp22I	TGATCA	1 cut(s)	718
KspI	CCGCGG	2 cut(s)	282, 396
Kzo9I	GATC	5 cut(s)	327, 387, 600, 630, 718
LguI	GCTCTTC	2 cut(s)	1090, 1292
LmnI	GCTCC	2 cut(s)	712, 1006
Lsp1109I	GCAGC	2 cut(s)	558, 609
LweI	GCATC	4 cut(s)	302, 444, 483, 907
MaeI	CTAG	1 cut(s)	1191
MaeII	ACGT	5 cut(s)	261, 351, 363, 585, 780
MaeIII	GTNAC	5 cut(s)	209, 262, 364, 1046, 1115
MalI	GATC	5 cut(s)	329, 389, 602, 632, 720
MbiI	CCGCTC	2 cut(s)	471, 1342
MboI	GATC	5 cut(s)	327, 387, 600, 630, 718
MboII	GAAGA	5 cut(s)	908, 1107, 1193, 1267, 1309
MfeI	CAATTG	3 cut(s)	148, 1217, 1234
MhlI	GDGCHC	1 cut(s)	123
MlsI	TGGCCA	1 cut(s)	1165
MluCI	AATT	6 cut(s)	148, 244, 543, 733, 1217, 1234
MluNI	TGGCCA	1 cut(s)	1165
MlyI	GAGTC	4 cut(s)	269, 374, 404, 468
MmeI	TCCRAC	4 cut(s)	297, 321, 867, 1196
Mox20I	TGGCCA	1 cut(s)	1165
MroNI	GCCGGC	1 cut(s)	374
MscI	TGGCCA	1 cut(s)	1165
MseI	TTAA	1 cut(s)	845
Msp20I	TGGCCA	1 cut(s)	1165
MspA1I	CMGCKG	7 cut(s)	281, 395, 559, 571, 622, 643, 1252
MspI	CCGG	5 cut(s)	375, 611, 784, 861, 1209
MspR9I	CCNGG	5 cut(s)	26, 480, 785, 861, 1113
MunI	CAATTG	3 cut(s)	148, 1217, 1234
MvaI	CCWGG	3 cut(s)	26, 480, 1113
MvnI	CGCG	5 cut(s)	281, 395, 527, 605, 1011
NaeI	GCCGGC	1 cut(s)	376
NciI	CCSGG	2 cut(s)	785, 861
NdeII	GATC	5 cut(s)	327, 387, 600, 630, 718
NgoMIV	GCCGGC	1 cut(s)	374
NlaIII	CATG	8 cut(s)	388, 514, 697, 730, 794, 953, 961, 1034
NlaIV	GGNNCC	1 cut(s)	970
NmeAIII	GCCGAG	1 cut(s)	651
NmuCI	GTSAC	3 cut(s)	262, 364, 1115
NruI	TCGCGA	1 cut(s)	605
NsbI	TGCGCA	1 cut(s)	1088
NspI	RCATGY	1 cut(s)	794
PaeI	GCATGC	1 cut(s)	794
PagI	TCATGA	3 cut(s)	510, 726, 949
PaqCI	CACCTGC	1 cut(s)	1310
PciSI	GCTCTTC	2 cut(s)	1090, 1292
PcsI	WCGNNNNNNNCGW	3 cut(s)	234, 414, 459
PdiI	GCCGGC	1 cut(s)	376
PfeI	GAWTC	1 cut(s)	963
PflMI	CCANNNNNTGG	1 cut(s)	303
PinAI	ACCGGT	2 cut(s)	610, 1208
PkrI	GCNGC	8 cut(s)	236, 283, 394, 397, 473, 570, 573, 624
PleI	GAGTC	4 cut(s)	269, 374, 404, 467
PmaCI	CACGTG	1 cut(s)	586
PmlI	CACGTG	1 cut(s)	586
PpsI	GAGTC	4 cut(s)	269, 374, 404, 467
Ppu21I	YACGTR	1 cut(s)	586
PpuMI	RGGWCCY	2 cut(s)	28, 996
Psp5II	RGGWCCY	2 cut(s)	28, 996
Psp6I	CCWGG	3 cut(s)	24, 478, 1111
PspCI	CACGTG	1 cut(s)	586
PspFI	CCCAGC	2 cut(s)	639, 816
PspGI	CCWGG	3 cut(s)	24, 478, 1111
PspN4I	GGNNCC	1 cut(s)	970
PspPI	GGNCC	5 cut(s)	28, 88, 616, 968, 996
PspPPI	RGGWCCY	2 cut(s)	28, 996
PsrI	GAACNNNNNNTAC	2 cut(s)	862, 894
PvuII	CAGCTG	2 cut(s)	622, 643
RruI	TCGCGA	1 cut(s)	605
RsaI	GTAC	4 cut(s)	8, 563, 674, 1200
RsaNI	GTAC	4 cut(s)	7, 562, 673, 1199
SacII	CCGCGG	2 cut(s)	282, 396
SapI	GCTCTTC	2 cut(s)	1090, 1292
SaqAI	TTAA	1 cut(s)	845
SatI	GCNGC	8 cut(s)	235, 282, 393, 396, 472, 569, 572, 623
Sau3AI	GATC	5 cut(s)	327, 387, 600, 630, 718
Sau96I	GGNCC	5 cut(s)	28, 88, 616, 968, 996
ScaI	AGTACT	1 cut(s)	674
SchI	GAGTC	4 cut(s)	269, 374, 404, 468
ScrFI	CCNGG	5 cut(s)	26, 480, 785, 861, 1113
SduI	GDGCHC	1 cut(s)	123
SfaNI	GCATC	4 cut(s)	302, 444, 483, 907
Sfr303I	CCGCGG	2 cut(s)	282, 396
SgrAI	CRCCGGYG	1 cut(s)	610
SgrBI	CCGCGG	2 cut(s)	282, 396
SinI	GGWCC	4 cut(s)	28, 88, 616, 996
SmlI	CTYRAG	1 cut(s)	422
SmoI	CTYRAG	1 cut(s)	422
SphI	GCATGC	1 cut(s)	794
Sse9I	AATT	6 cut(s)	148, 244, 543, 733, 1217, 1234
SspMI	CTAG	1 cut(s)	1191
StyD4I	CCNGG	5 cut(s)	24, 478, 783, 859, 1111
StyI	CCWWGG	1 cut(s)	681
TaaI	ACNGT	4 cut(s)	209, 230, 370, 1291
TaiI	ACGT	5 cut(s)	264, 354, 366, 588, 783
TaqI	TCGA	3 cut(s)	465, 633, 930
TasI	AATT	6 cut(s)	148, 244, 543, 733, 1217, 1234
TatI	WGTACW	1 cut(s)	672
TauI	GCSGC	6 cut(s)	237, 284, 395, 398, 474, 571
TfiI	GAWTC	1 cut(s)	963
Tru1I	TTAA	1 cut(s)	845
Tru9I	TTAA	1 cut(s)	845
TscAI	CASTG	1 cut(s)	1339
TseFI	GTSAC	3 cut(s)	262, 364, 1115
TseI	GCWGC	2 cut(s)	571, 622
Tsp45I	GTSAC	3 cut(s)	262, 364, 1115
TspDTI	ATGAA	4 cut(s)	527, 715, 1047, 1231
TspRI	CASTG	1 cut(s)	1339
Van91I	CCANNNNNTGG	1 cut(s)	303
VpaK11BI	GGWCC	4 cut(s)	28, 88, 616, 996
XagI	CCTNNNNNAGG	1 cut(s)	23
XapI	RAATTY	1 cut(s)	543
XceI	RCATGY	1 cut(s)	794
XmiI	GTMKAC	1 cut(s)	1065
XspI	CTAG	1 cut(s)	1191
ZraI	GACGTC	1 cut(s)	364
ZrmI	AGTACT	1 cut(s)	674

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.