Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0010671

Physical Location & Seq

Genomic Coordinates Forward (+)

1312672 .. 1316044

Gene Structure 3373 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1021600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1449 bp

ATGCCCTTCACTCATACGCTTCCATTCGCTTCCATGAATTCATCTGCAGGTGTGGATCCATTGACCAATGGCCTCAAAACCAACCTGTCCCTCAATCCATCATCTAATGGCAACGCCTCCAATGCCAAACCCTCAGCCAAGCAACCGTTTTTCATCGGTGTTGCTGGTGGGACTGCGTCCGGAAAAACTACCGTCTGCAACATGATCATCTCCCAGCTGCGCGATCAGCGTGTTGTTCTCGTAAATCAAGATTCGTTTTATCATTCCTTGGATGCTGAGAAACTGAAAAGGGTTCATGAGTACAATTTTGATCATCCCGAGGCATTCGACACAGAGCTTTTGCTTTCTTGCATGGAGCACTTAAAGCGCGGACAGGCAGTCAGCATCCCGAATTATGATTTTAAGACTCATCAAGCTATAGAACCAACTCGGAAGGTTAACCCCCCAGACATCATCATTTTAGAAGGAATACTTGTTCTCCATGACCCTCGCGTCCGTGATCTCATGAACATGAAAATATTCGTCGACACAGATTCTGATGTACGCCTTTCACGGAGAATTCAACGTGACACAGTTGAAAGAGGCAGAAATATCGAGAATGTGCTTGACCAATATGCCAGATTCGTGAAGCCTAGTTTCGAAGAGTTCATACTTCCCTCGAAAAAATATGCAGACATCATCATTCCTCGAGGAGGAGATAACGATGTTGCAATCGACTTGATTGTACAACATATTCATACAAAGCTAGGCCAGCATGAACTGTGTAAAATATATCCAAACATCGTCGTTATACATTCAACGTTTCAGATACGGGGAATGCACACCCTAATTCGCGATGCCAAAACAACGAAGCATGACTTCGTCTTTTATGCAGACCGTCTTATTCGCTTGGTTGTGGAGCATGGACTAGGTCAGCTTCCCTTCAAAGAAAAGCAGATCATTACCCCAACAGGAACTGTTTACAGTGGAGTTATTTTCTACAAACATTTGTGCGGCGTTTCAGTCATTAGAAGTGGAGAAAGCATGGAGAATGCACTTAGAGCATGCTGCAAGGGTATTAAAATCGGAAAAATCCTCATCCATGGAAAGGGTAACGATGGCCGAGAGTTGATCTATGAGAAGCTACCAAAAGATATCGCAAGCCGGCATGTGTTATTTCTTGATCCTGTTCTGGCTTCAGGATACTCCGCCATCAAAGCGATATCTCTGCTGCTCAGTAAGGGCGTACCTGAAACGAACATCATCTTCCTTAACCTCATAGCAGCGCCACATGGAATACATGCCATCTGCAAGAAATTTCCGAAGCTAAAACTCGTTACATCGGAGATCGATGAATCTCTGAACGACGACTTGCGCGTGATCCCGGGCATGGGAGAGTTCGGAGACCGTTACTTCGGCACAGATAACGAAGGAGAAGGTACCATTTCAAGTTCAAGGACGCCGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004849 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006222 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009129 GO:0009130 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009173 GO:0009174 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0043094 GO:0043097 GO:0043174 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046049 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko00983 ko01100 map00240 map00983 map01100

Pfam Domains

Protein Families

PRK UPRTase

Protein Analysis

483

Amino Acids

53.76

Weight (kDa)

8.65

Isoelectric Point (pI)

33.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRK	PF00485	51 - 237	1.2e-53	Phosphoribulokinase / Uridine kinase family
UPRTase	PF14681	266 - 467	5.2e-71	Uracil phosphoribosyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010671)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27440 AT3G27440 AT3G27440
fragaria_vesca	FvH4_6g51940
malus_domestica	MD09G1021600.v1.1
prunus_persica	Prupe.3G294700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0173421
rosa_laevigata	RLG00000022188
rosa_multiflora	Rmu_co8519037.1_g000001 Rmu_ssc0000282.1_g000014
rosa_roxburghii	Rroxscaffold_2G00078870
rosa_rugosa	Rorug02G0568200 Rorug02G0568300 Rorug02G0568400 Rorug02G0568500
rosa_samantha	Rh2AG648700 Rh2BG659300 Rh2CG624600 Rh2DG674500
rosa_wichuraiana	Rw2G053250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	38
AasI	GACNNNNNNGTC	1 cut(s)	491
AbsI	CCTCGAGG	1 cut(s)	687
Acc36I	ACCTGC	1 cut(s)	38
Acc65I	GGTACC	1 cut(s)	1418
AccB1I	GGYRCC	1 cut(s)	1418
AccI	GTMKAC	1 cut(s)	525
AccII	CGCG	5 cut(s)	222, 369, 492, 834, 1356
AccIII	TCCGGA	1 cut(s)	179
AciI	CCGC	3 cut(s)	369, 993, 1188
AclI	AACGTT	1 cut(s)	800
AclWI	GGATC	4 cut(s)	50, 63, 1157, 1354
AcoI	YGGCCR	1 cut(s)	1099
AcsI	RAATTY	3 cut(s)	37, 558, 1295
AcuI	CTGAAG	1 cut(s)	1161
AcyI	GRCGYC	1 cut(s)	1439
AfaI	GTAC	5 cut(s)	302, 543, 726, 1227, 1420
AfiI	CCNNNNNNNGG	4 cut(s)	692, 1087, 1369, 1370
AgsI	TTSAA	6 cut(s)	563, 578, 798, 925, 1428, 1434
AhdI	GACNNNNNGTC	1 cut(s)	377
AloI	GAACNNNNNNTCC	2 cut(s)	459, 491
AluBI	AGCT	7 cut(s)	217, 337, 416, 745, 916, 1123, 1306
AluI	AGCT	7 cut(s)	217, 337, 416, 745, 916, 1123, 1306
Alw21I	GWGCWC	1 cut(s)	360
Alw26I	GTCTC	1 cut(s)	1377
AlwI	GGATC	4 cut(s)	50, 63, 1157, 1354
AlwNI	CAGNNNCTG	2 cut(s)	536, 956
Ama87I	CYCGRG	3 cut(s)	317, 687, 1363
Aor13HI	TCCGGA	1 cut(s)	179
AoxI	GGCC	3 cut(s)	70, 748, 1099
ApeKI	GCWGC	4 cut(s)	217, 1047, 1210, 1262
ApoI	RAATTY	3 cut(s)	37, 558, 1295
ArsI	GACNNNNNNTTYG	2 cut(s)	1376, 1408
Asp700I	GAANNNNTTC	1 cut(s)	518
Asp718I	GGTACC	1 cut(s)	1418
AspLEI	GCGC	4 cut(s)	222, 369, 1267, 1356
AsuC2I	CCSGG	2 cut(s)	1364, 1365
AsuII	TTCGAA	1 cut(s)	639
AvaI	CYCGRG	3 cut(s)	317, 687, 1363
BamHI	GGATCC	1 cut(s)	55
BanI	GGYRCC	1 cut(s)	1418
BarI	GAAGNNNNNNTAC	2 cut(s)	633, 665
Bbv12I	GWGCWC	1 cut(s)	360
BbvCI	CCTCAGC	1 cut(s)	133
BbvI	GCAGC	4 cut(s)	204, 1034, 1197, 1274
BccI	CCATC	4 cut(s)	106, 1091, 1199, 1292
BcgI	CGANNNNNNTGC	4 cut(s)	574, 608, 1189, 1223
BciVI	GTATCC	1 cut(s)	1175
BclI	TGATCA	2 cut(s)	204, 310
BcnI	CCSGG	2 cut(s)	1364, 1365
BcoDI	GTCTC	1 cut(s)	1377
BfaI	CTAG	3 cut(s)	633, 746, 908
BfmI	CTRYAG	2 cut(s)	45, 417
BfoI	RGCGCY	1 cut(s)	1268
BfuAI	ACCTGC	1 cut(s)	38
BfuI	GTATCC	1 cut(s)	1175
BisI	GCNGC	5 cut(s)	218, 994, 1048, 1211, 1263
BlsI	GCNGC	5 cut(s)	219, 995, 1049, 1212, 1264
Bme1390I	CCNGG	2 cut(s)	1364, 1365
BmeRI	GACNNNNNGTC	1 cut(s)	377
BmeT110I	CYCGRG	3 cut(s)	317, 687, 1363
BmiI	GGNNCC	2 cut(s)	57, 1420
BmrFI	CCNGG	2 cut(s)	1364, 1365
BmsI	GCATC	3 cut(s)	262, 393, 826
Bpu10I	CCTNAGC	1 cut(s)	133
Bpu14I	TTCGAA	1 cut(s)	639
BpuMI	CCSGG	2 cut(s)	1364, 1365
Bsa29I	ATCGAT	1 cut(s)	1329
BsaHI	GRCGYC	1 cut(s)	1439
BsaI	GGTCTC	1 cut(s)	1377
BsaJI	CCNNGG	4 cut(s)	267, 318, 1081, 1363
BsaWI	WCCGGW	1 cut(s)	179
BsaXI	ACNNNNNCTCC	2 cut(s)	462, 492
Bsc4I	CCNNNNNNNGG	4 cut(s)	692, 1087, 1369, 1370
Bse118I	RCCGGY	1 cut(s)	1143
BseAI	TCCGGA	1 cut(s)	179
BseCI	ATCGAT	1 cut(s)	1329
BseDI	CCNNGG	4 cut(s)	267, 318, 1081, 1363
BseGI	GGATG	4 cut(s)	277, 313, 384, 1077
BseLI	CCNNNNNNNGG	4 cut(s)	692, 1087, 1369, 1370
BseMII	CTCAG	3 cut(s)	147, 267, 1228
BseRI	GAGGAG	2 cut(s)	705, 708
BseXI	GCAGC	4 cut(s)	204, 1034, 1197, 1274
BseYI	CCCAGC	1 cut(s)	213
Bsh1236I	CGCG	5 cut(s)	222, 369, 492, 834, 1356
BshFI	GGCC	3 cut(s)	72, 750, 1101
BshNI	GGYRCC	1 cut(s)	1418
BshVI	ATCGAT	1 cut(s)	1329
BsiHKAI	GWGCWC	1 cut(s)	360
BsiHKCI	CYCGRG	3 cut(s)	317, 687, 1363
BsiSI	CCGG	3 cut(s)	180, 1144, 1364
BslFI	GGGAC	2 cut(s)	73, 184
BslI	CCNNNNNNNGG	4 cut(s)	692, 1087, 1369, 1370
BsmAI	GTCTC	1 cut(s)	1377
BsmFI	GGGAC	2 cut(s)	73, 184
BsmI	GAATGC	3 cut(s)	323, 822, 1036
BsnI	GGCC	3 cut(s)	72, 750, 1101
Bso31I	GGTCTC	1 cut(s)	1377
BsoBI	CYCGRG	3 cut(s)	317, 687, 1363
Bsp119I	TTCGAA	1 cut(s)	639
Bsp1286I	GDGCHC	1 cut(s)	360
Bsp13I	TCCGGA	1 cut(s)	179
Bsp1407I	TGTACA	1 cut(s)	724
Bsp19I	CCATGG	1 cut(s)	1081
Bsp68I	TCGCGA	1 cut(s)	834
BspACI	CCGC	3 cut(s)	369, 993, 1188
BspANI	GGCC	3 cut(s)	72, 750, 1101
BspCNI	CTCAG	3 cut(s)	146, 268, 1227
BspDI	ATCGAT	1 cut(s)	1329
BspEI	TCCGGA	1 cut(s)	179
BspFNI	CGCG	5 cut(s)	222, 369, 492, 834, 1356
BspHI	TCATGA	2 cut(s)	295, 504
BspLI	GGNNCC	2 cut(s)	57, 1420
BspMAI	CTGCAG	1 cut(s)	49
BspMI	ACCTGC	1 cut(s)	38
BspPI	GGATC	4 cut(s)	50, 63, 1157, 1354
BspT104I	TTCGAA	1 cut(s)	639
BspT107I	GGYRCC	1 cut(s)	1418
BspTNI	GGTCTC	1 cut(s)	1377
BsrFI	RCCGGY	1 cut(s)	1143
BsrGI	TGTACA	1 cut(s)	724
BssAI	RCCGGY	1 cut(s)	1143
BssECI	CCNNGG	4 cut(s)	267, 318, 1081, 1363
BssNI	GRCGYC	1 cut(s)	1439
BssT1I	CCWWGG	2 cut(s)	267, 1081
Bst4CI	ACNGT	8 cut(s)	147, 193, 574, 762, 878, 958, 965, 1388
Bst6I	CTCTTC	1 cut(s)	636
BstACI	GRCGYC	1 cut(s)	1439
BstAUI	TGTACA	1 cut(s)	724
BstBI	TTCGAA	1 cut(s)	639
BstC8I	GCNNGC	4 cut(s)	752, 1045, 1141, 1145
BstDEI	CTNAG	4 cut(s)	133, 276, 1037, 1214
BstDSI	CCRYGG	1 cut(s)	1081
BstENI	CCTNNNNNAGG	1 cut(s)	690
BstF5I	GGATG	4 cut(s)	277, 313, 384, 1077
BstFNI	CGCG	5 cut(s)	222, 369, 492, 834, 1356
BstH2I	RGCGCY	1 cut(s)	1268
BstHHI	GCGC	4 cut(s)	222, 369, 1267, 1356
BstMAI	GTCTC	1 cut(s)	1377
BstMWI	GCNNNNNNNGC	6 cut(s)	122, 226, 364, 751, 1040, 1196
BstNSI	RCATGY	3 cut(s)	1047, 1151, 1283
BstSCI	CCNGG	2 cut(s)	1362, 1363
BstSFI	CTRYAG	2 cut(s)	45, 417
BstUI	CGCG	5 cut(s)	222, 369, 492, 834, 1356
BstV1I	GCAGC	4 cut(s)	204, 1034, 1197, 1274
BstX2I	RGATCY	1 cut(s)	55
BstYI	RGATCY	1 cut(s)	55
Bsu15I	ATCGAT	1 cut(s)	1329
BsuI	GTATCC	1 cut(s)	1175
BsuRI	GGCC	3 cut(s)	72, 750, 1101
BsuTUI	ATCGAT	1 cut(s)	1329
BtgI	CCRYGG	1 cut(s)	1081
BtgZI	GCGATG	1 cut(s)	849
BtsCI	GGATG	4 cut(s)	277, 313, 384, 1077
BtsIMutI	CAGTG	1 cut(s)	970
BtuMI	TCGCGA	1 cut(s)	834
BveI	ACCTGC	1 cut(s)	38
Cac8I	GCNNGC	4 cut(s)	752, 1045, 1141, 1145
CaiI	CAGNNNCTG	2 cut(s)	536, 956
CciI	TCATGA	2 cut(s)	295, 504
CfoI	GCGC	4 cut(s)	222, 369, 1267, 1356
Cfr10I	RCCGGY	1 cut(s)	1143
Cfr9I	CCCGGG	1 cut(s)	1363
ClaI	ATCGAT	1 cut(s)	1329
CseI	GACGC	2 cut(s)	165, 481
Csp6I	GTAC	5 cut(s)	301, 542, 725, 1226, 1419
CviQI	GTAC	5 cut(s)	301, 542, 725, 1226, 1419
DdeI	CTNAG	4 cut(s)	133, 276, 1037, 1214
DrdI	GACNNNNNNGTC	1 cut(s)	491
DriI	GACNNNNNGTC	1 cut(s)	377
DseDI	GACNNNNNNGTC	1 cut(s)	491
EaeI	YGGCCR	1 cut(s)	1099
Eam1104I	CTCTTC	1 cut(s)	636
Eam1105I	GACNNNNNGTC	1 cut(s)	377
EarI	CTCTTC	1 cut(s)	636
EciI	GGCGGA	1 cut(s)	1177
Eco130I	CCWWGG	2 cut(s)	267, 1081
Eco31I	GGTCTC	1 cut(s)	1377
Eco32I	GATATC	2 cut(s)	1135, 1203
Eco57I	CTGAAG	1 cut(s)	1161
Eco88I	CYCGRG	3 cut(s)	317, 687, 1363
EcoNI	CCTNNNNNAGG	1 cut(s)	690
EcoRI	GAATTC	2 cut(s)	37, 558
EcoRV	GATATC	2 cut(s)	1135, 1203
EcoT14I	CCWWGG	2 cut(s)	267, 1081
ErhI	CCWWGG	2 cut(s)	267, 1081
FalI	AAGNNNNNCTT	4 cut(s)	456, 488, 842, 874
FaqI	GGGAC	2 cut(s)	73, 184
FbaI	TGATCA	2 cut(s)	204, 310
FblI	GTMKAC	1 cut(s)	525
Fnu4HI	GCNGC	5 cut(s)	218, 994, 1048, 1211, 1263
FokI	GGATG	4 cut(s)	284, 300, 371, 1064
Fsp4HI	GCNGC	5 cut(s)	218, 994, 1048, 1211, 1263
FspBI	CTAG	3 cut(s)	633, 746, 908
GlaI	GCGC	4 cut(s)	221, 368, 1266, 1355
GluI	GCNGC	5 cut(s)	218, 994, 1048, 1211, 1263
GsaI	CCCAGC	1 cut(s)	217
HaeII	RGCGCY	1 cut(s)	1268
HaeIII	GGCC	3 cut(s)	72, 750, 1101
HapII	CCGG	3 cut(s)	180, 1144, 1364
HgaI	GACGC	2 cut(s)	165, 481
HhaI	GCGC	4 cut(s)	222, 369, 1267, 1356
Hin1I	GRCGYC	1 cut(s)	1439
Hin6I	GCGC	4 cut(s)	220, 367, 1265, 1354
HinP1I	GCGC	4 cut(s)	220, 367, 1265, 1354
HincII	GTYRAC	2 cut(s)	439, 526
HindII	GTYRAC	2 cut(s)	439, 526
HinfI	GANTC	5 cut(s)	251, 406, 533, 621, 1334
HpaI	GTTAAC	1 cut(s)	439
HpaII	CCGG	3 cut(s)	180, 1144, 1364
Hpy166II	GTNNAC	3 cut(s)	439, 526, 961
Hpy188I	TCNGA	8 cut(s)	432, 538, 807, 1067, 1302, 1324, 1341, 1382
Hpy8I	GTNNAC	3 cut(s)	439, 526, 961
Hpy99I	CGWCG	3 cut(s)	527, 788, 1349
HpyAV	CCTTC	6 cut(s)	16, 427, 458, 931, 1403, 1409
HpyCH4III	ACNGT	8 cut(s)	147, 193, 574, 762, 878, 958, 965, 1388
HpyCH4IV	ACGT	2 cut(s)	565, 800
HpyF10VI	GCNNNNNNNGC	6 cut(s)	122, 226, 364, 751, 1040, 1196
HpyF3I	CTNAG	4 cut(s)	133, 276, 1037, 1214
HpySE526I	ACGT	2 cut(s)	565, 800
Hsp92I	GRCGYC	1 cut(s)	1439
HspAI	GCGC	4 cut(s)	220, 367, 1265, 1354
Kpn2I	TCCGGA	1 cut(s)	179
KpnI	GGTACC	1 cut(s)	1422
KroI	GCCGGC	1 cut(s)	1143
KroNI	GCCGGC	1 cut(s)	1145
Ksp22I	TGATCA	2 cut(s)	204, 310
KspAI	GTTAAC	1 cut(s)	439
LmnI	GCTCC	2 cut(s)	355, 898
Lsp1109I	GCAGC	4 cut(s)	204, 1034, 1197, 1274
LweI	GCATC	3 cut(s)	262, 393, 826
MaeI	CTAG	3 cut(s)	633, 746, 908
MaeII	ACGT	2 cut(s)	565, 800
MaeIII	GTNAC	4 cut(s)	566, 1091, 1315, 1388
MboII	GAAGA	2 cut(s)	653, 1237
MflI	RGATCY	1 cut(s)	55
MhlI	GDGCHC	1 cut(s)	360
MluCI	AATT	6 cut(s)	37, 304, 391, 558, 828, 1295
MlyI	GAGTC	1 cut(s)	400
MroI	TCCGGA	1 cut(s)	179
MroNI	GCCGGC	1 cut(s)	1143
MroXI	GAANNNNTTC	1 cut(s)	518
MseI	TTAA	5 cut(s)	362, 402, 438, 1059, 1251
MslI	CAYNNNNRTG	1 cut(s)	509
MspA1I	CMGCKG	1 cut(s)	217
MspI	CCGG	3 cut(s)	180, 1144, 1364
MspR9I	CCNGG	2 cut(s)	1364, 1365
Mva1269I	GAATGC	3 cut(s)	323, 822, 1036
MvnI	CGCG	5 cut(s)	222, 369, 492, 834, 1356
MwoI	GCNNNNNNNGC	6 cut(s)	122, 226, 364, 751, 1040, 1196
NaeI	GCCGGC	1 cut(s)	1145
NciI	CCSGG	2 cut(s)	1364, 1365
NcoI	CCATGG	1 cut(s)	1081
NgoMIV	GCCGGC	1 cut(s)	1143
NlaIV	GGNNCC	2 cut(s)	57, 1420
NmeAIII	GCCGAG	1 cut(s)	1127
NmuCI	GTSAC	1 cut(s)	566
NruI	TCGCGA	1 cut(s)	834
NspI	RCATGY	3 cut(s)	1047, 1151, 1283
NspV	TTCGAA	1 cut(s)	639
PaeI	GCATGC	1 cut(s)	1047
PaeR7I	CTCGAG	1 cut(s)	687
PagI	TCATGA	2 cut(s)	295, 504
PaqCI	CACCTGC	1 cut(s)	38
PcsI	WCGNNNNNNNCGW	1 cut(s)	1353
PctI	GAATGC	3 cut(s)	323, 822, 1036
PdiI	GCCGGC	1 cut(s)	1145
PdmI	GAANNNNTTC	1 cut(s)	518
PfeI	GAWTC	4 cut(s)	251, 533, 621, 1334
PflFI	GACNNNGTC	3 cut(s)	175, 860, 909
PkrI	GCNGC	5 cut(s)	219, 995, 1049, 1212, 1264
PleI	GAGTC	1 cut(s)	400
PpsI	GAGTC	1 cut(s)	400
Psp1406I	AACGTT	1 cut(s)	800
PspFI	CCCAGC	1 cut(s)	213
PspN4I	GGNNCC	2 cut(s)	57, 1420
PspXI	VCTCGAGB	1 cut(s)	687
PstI	CTGCAG	1 cut(s)	49
PstNI	CAGNNNCTG	2 cut(s)	536, 956
PsuI	RGATCY	1 cut(s)	55
PsyI	GACNNNGTC	3 cut(s)	175, 860, 909
PvuII	CAGCTG	1 cut(s)	217
RruI	TCGCGA	1 cut(s)	834
RsaI	GTAC	5 cut(s)	302, 543, 726, 1227, 1420
RsaNI	GTAC	5 cut(s)	301, 542, 725, 1226, 1419
RseI	CAYNNNNRTG	1 cut(s)	509
SalI	GTCGAC	1 cut(s)	524
SaqAI	TTAA	5 cut(s)	362, 402, 438, 1059, 1251
SatI	GCNGC	5 cut(s)	218, 994, 1048, 1211, 1263
SchI	GAGTC	1 cut(s)	400
ScrFI	CCNGG	2 cut(s)	1364, 1365
SduI	GDGCHC	1 cut(s)	360
SfaNI	GCATC	3 cut(s)	262, 393, 826
SfcI	CTRYAG	2 cut(s)	45, 417
Sfr274I	CTCGAG	1 cut(s)	687
SfuI	TTCGAA	1 cut(s)	639
SlaI	CTCGAG	1 cut(s)	687
SmaI	CCCGGG	1 cut(s)	1365
SmiMI	CAYNNNNRTG	1 cut(s)	509
SmlI	CTYRAG	1 cut(s)	687
SmoI	CTYRAG	1 cut(s)	687
SphI	GCATGC	1 cut(s)	1047
Sse9I	AATT	6 cut(s)	37, 304, 391, 558, 828, 1295
SsiI	CCGC	3 cut(s)	369, 993, 1188
SspI	AATATT	1 cut(s)	519
SspMI	CTAG	3 cut(s)	633, 746, 908
StyD4I	CCNGG	2 cut(s)	1362, 1363
StyI	CCWWGG	2 cut(s)	267, 1081
TaaI	ACNGT	8 cut(s)	147, 193, 574, 762, 878, 958, 965, 1388
TaiI	ACGT	2 cut(s)	568, 803
TaqI	TCGA	8 cut(s)	327, 525, 594, 639, 659, 688, 714, 1329
TasI	AATT	6 cut(s)	37, 304, 391, 558, 828, 1295
TatI	WGTACW	2 cut(s)	300, 724
TauI	GCSGC	1 cut(s)	996
TfiI	GAWTC	4 cut(s)	251, 533, 621, 1334
Tru1I	TTAA	5 cut(s)	362, 402, 438, 1059, 1251
Tru9I	TTAA	5 cut(s)	362, 402, 438, 1059, 1251
TscAI	CASTG	1 cut(s)	970
TseFI	GTSAC	1 cut(s)	566
TseI	GCWGC	4 cut(s)	217, 1047, 1210, 1262
Tsp45I	GTSAC	1 cut(s)	566
TspGWI	ACGGA	2 cut(s)	485, 568
TspMI	CCCGGG	1 cut(s)	1363
TspRI	CASTG	1 cut(s)	970
Tth111I	GACNNNGTC	3 cut(s)	175, 860, 909
XagI	CCTNNNNNAGG	1 cut(s)	690
XapI	RAATTY	3 cut(s)	37, 558, 1295
XceI	RCATGY	3 cut(s)	1047, 1151, 1283
XhoI	CTCGAG	1 cut(s)	687
XmaI	CCCGGG	1 cut(s)	1363
XmiI	GTMKAC	1 cut(s)	525
XmnI	GAANNNNTTC	1 cut(s)	518
XspI	CTAG	3 cut(s)	633, 746, 908

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.