Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0010671

Physical Location & Seq

Genomic Coordinates Forward (+)

69372127 .. 69376000

Gene Structure 3874 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0568500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGCGCGGACAAACGTTGCGGAATTTTGACATCCGCAGAGTGCCGCACACCACCGCAAGGGTTTCTCACTCAACATTCACCTACAGATTTTCGTTAACTACGGGCCAGAAGTTCATACGCTTGTATTTCTACCATGCATCATATGCTGACTTTGACCTCTCCAAAGCCCTGTTTTCCGTTGAAGCAGGTGGCTATACCCTTCTCCAAGATTTCAATGCTTCAGCCACTGTGGATGCTGCTGGGGTGGAGACGATATACAGAGAGTTCTGTTTGAACATTTATTACGGATATCAGATTCTGAGCATTACATTCACTCCAAGCAAAGCCAAGCAGGCATATGCCTTTATCAATGGAATCAAAATTGTGTCCATGCCGACCTATCTTTACTACACTACACCTCACAGCAATGCGGCTGATTACATAGGCGGGGAAGACAGATTTCCTATTCAGGAGAACACTGCTATGGAGATGGTTTACCGAATCAACATCGGTGGCAGCTCATTCTCATCCAGTCAAGACACTGGAATGTACCGCAAATGGAATGGTGATGATGTGACCTACTTGGATGAATTAAGTAGAAGTCTAACCGTTTCACCGTCCAACCCAAGCATTCTACTCAAGTTTGCCAAAATACCTGAATACAGTGCGCCAAAAGAAGTTTATCAAACAGGCCGGTCAATTGACTCCAACAAGACAAACAACAAGAGCTACAATCTCACCTGGGAATTTCCTGTAGATTCTAACCATCCCCACCTGGTTAGGCTACATTTCTGTGAGCTTGAGCCCGAAATTACCAAGATAGGAGAGCAGACTTTTCTAATTTACATAGGGAATCAAGCCGCAGATACAGCAGTCGACATAGTCGAATGGAGTGGTGGAAATGGGATACCAGTATACAGAGACTACGTGGTGGTCTTGTCTAACCCAGTAAGGCAGAAGAATGTAAGTCTTTCTATCACACTGCAAGCATTCCAAATGGATTGGATGATTAAATACAAGAATGCAATGTTGAATGGGCTCGAAATCCTGAAATTGATCGCCCCAAAAGGCCCTCAAGCCGGAAGCAGCACCAACCCGAAGTTGACGCCGCTAAGCCCAAGAACTTCAAAGAGTTCAAGTTCTGTGCTTGCCGTCGTTGCTGGTGTAGTTTCTAGCACAGTAGTATTCTCTGCCCTTGGATTCTTGATTTTCAGGCAAAGATGGAAAGTCAAGGACTCCGGCTCCAGCCACGGGACAATGGAGTTAACAATGACCCCCAGCTCATCTTCACTGTCATATTTGTGTCGCTACTTTTCACTAGCAGAGATCAAAGCCGCCACCAAGAACTTCAATCATACTTTCATTATTGGTGTTGGAAGATTCGGCAACGTGTACAAAGGATGCATCGATGGTGGAGCCACTCACGTTGCAATTAAACGACTGAAACCTGAGTCATCCCAGGGTGCCCATGAGTTCAAGACAGAAATTGAGTTGCTCTCCCAACTTCGTCATCGCCATTTGGTTTCACTTATTGGATACTGTACTGATAAAGGTGAGATGATCTTGGTATATGATTACATGGCCCATGGATCCCTCCATGATCATCTCTACCACACCAATAACTCCACTCTTTCTTGGGAACAACGGCTTCAGATTTGTATTGGCACGGCTCAAGGGCTGCAGTACCTTCATGGAGGTGCCAAGGAAACCATCATTCACCGTGACGTGAAGAGCACAAACATCTTATTGGATGAGAAATGGGTGGCCAAGGTTTCGGATTTTGGGTTGTCAAAAATGGGGAGCCCCAACATGTCCAAGACCCACAAAAGCACGGTACTATGTGCAAAGCCAGCTGTGATAAATACAGAGGAGATGAGGCAAATGAACTTATCTGAGTGGGCCAAAAGCTGTCATCACAAGGGGGAACTTGATCGAATCATCGACCCAAGCTTAACGGGTAACATTGCAACCGAGAGCTTGAATAAATTTGTTGATATTGCAATGAGCTGTGTGCATGAAAATGGTGTTGAGAGGCCGTCGATGGATGATGTTCTCAGGGGGCTTGAGCTTGCGTTGCAGATTCATCATAGCCAAGAGAGTGATATCAACTCCATTAATCACTACAAGAAAAAACATGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004849 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006222 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009129 GO:0009130 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009173 GO:0009174 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0043094 GO:0043097 GO:0043174 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046049 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko00983 ko01100 map00240 map00983 map01100

Pfam Domains

Protein Families

PRK UPRTase

Protein Analysis

706

Amino Acids

79.06

Weight (kDa)

8.57

Isoelectric Point (pI)

38.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	18 - 343	2.6e-20	Malectin-like domain
Malectin	PF11721	158 - 313	9.2e-09	Malectin domain
Pkinase	PF00069	448 - 617	1.5e-32	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	449 - 600	4.9e-37	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010671)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27440 AT3G27440 AT3G27440
fragaria_vesca	FvH4_6g51940
malus_domestica	MD09G1021600.v1.1
prunus_persica	Prupe.3G294700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0173421
rosa_laevigata	RLG00000022188
rosa_multiflora	Rmu_co8519037.1_g000001 Rmu_ssc0000282.1_g000014
rosa_roxburghii	Rroxscaffold_2G00078870
rosa_rugosa	Rorug02G0568200 Rorug02G0568300 Rorug02G0568400 Rorug02G0568500
rosa_samantha	Rh2AG648700 Rh2BG659300 Rh2CG624600 Rh2DG674500
rosa_wichuraiana	Rw2G053250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	176
Acc36I	ACCTGC	1 cut(s)	176
AccB1I	GGYRCC	2 cut(s)	1442, 1676
AccI	GTMKAC	2 cut(s)	855, 894
AccII	CGCG	1 cut(s)	6
AclI	AACGTT	1 cut(s)	14
AclWI	GGATC	2 cut(s)	1563, 1576
AcoI	YGGCCR	1 cut(s)	1743
AcsI	RAATTY	3 cut(s)	22, 725, 1964
AcuI	CTGAAG	2 cut(s)	204, 1613
AcyI	GRCGYC	1 cut(s)	1085
AfaI	GTAC	5 cut(s)	530, 1373, 1522, 1664, 1815
AfiI	CCNNNNNNNGG	3 cut(s)	57, 1058, 1230
AflIII	ACRYGT	3 cut(s)	1368, 1788, 2113
AgsI	TTSAA	9 cut(s)	182, 214, 274, 1012, 1107, 1116, 1330, 1456, 1960
AjiI	CACGTC	1 cut(s)	1705
AjnI	CCWGG	3 cut(s)	719, 753, 1437
Alw21I	GWGCWC	1 cut(s)	1715
Alw26I	GTCTC	2 cut(s)	242, 894
AlwI	GGATC	2 cut(s)	1563, 1576
AlwNI	CAGNNNCTG	2 cut(s)	227, 298
AoxI	GGCC	7 cut(s)	103, 670, 1048, 1560, 1743, 1878, 2012
ApeKI	GCWGC	4 cut(s)	236, 495, 1065, 1657
ApoI	RAATTY	3 cut(s)	22, 725, 1964
AseI	ATTAAT	1 cut(s)	2094
AspLEI	GCGC	2 cut(s)	6, 649
AspS9I	GGNCC	4 cut(s)	103, 1049, 1561, 1878
AsuHPI	GGTGA	6 cut(s)	70, 557, 585, 709, 1544, 1688
BaeGI	GKGCMC	1 cut(s)	1447
BaeI	ACNNNNGTAYC	2 cut(s)	837, 870
BalI	TGGCCA	1 cut(s)	1745
BamHI	GGATCC	1 cut(s)	1568
BanI	GGYRCC	2 cut(s)	1442, 1676
BanII	GRGCYC	3 cut(s)	786, 1020, 1784
BbsI	GAAGAC	1 cut(s)	438
Bbv12I	GWGCWC	1 cut(s)	1715
BbvI	GCAGC	4 cut(s)	223, 507, 1077, 1644
BccI	CCATC	6 cut(s)	463, 753, 1194, 1382, 1697, 2014
BceAI	ACGGC	4 cut(s)	1115, 1640, 1662, 1999
BciT130I	CCWGG	3 cut(s)	721, 755, 1439
BciVI	GTATCC	2 cut(s)	879, 1508
BclI	TGATCA	1 cut(s)	1579
BcoDI	GTCTC	2 cut(s)	242, 894
BfaI	CTAG	2 cut(s)	1152, 1298
BfmI	CTRYAG	3 cut(s)	82, 732, 1658
BfuAI	ACCTGC	1 cut(s)	176
BfuI	GTATCC	2 cut(s)	879, 1508
BglI	GCCNNNNNGGC	1 cut(s)	332
BisI	GCNGC	9 cut(s)	44, 237, 411, 496, 840, 1066, 1088, 1314, 1658
BlpI	GCTNAGC	1 cut(s)	1091
BlsI	GCNGC	9 cut(s)	45, 238, 412, 497, 841, 1067, 1089, 1315, 1659
Bme1390I	CCNGG	3 cut(s)	721, 755, 1439
BmgBI	CACGTC	1 cut(s)	1705
BmgT120I	GGNCC	4 cut(s)	103, 1049, 1561, 1878
BmiI	GGNNCC	6 cut(s)	1222, 1396, 1444, 1570, 1678, 1781
BmrFI	CCNGG	3 cut(s)	721, 755, 1439
BmrI	ACTGGG	1 cut(s)	920
BmsI	GCATC	4 cut(s)	146, 223, 1370, 1392
BmuI	ACTGGG	1 cut(s)	920
BpiI	GAAGAC	1 cut(s)	438
BplI	GAGNNNNNCTC	2 cut(s)	1460, 1492
BpmI	CTGGAG	1 cut(s)	1207
Bpu1102I	GCTNAGC	1 cut(s)	1091
BpuEI	CTTGAG	5 cut(s)	602, 800, 1038, 1635, 2063
Bsa29I	ATCGAT	1 cut(s)	1386
BsaAI	YACGTR	1 cut(s)	907
BsaHI	GRCGYC	1 cut(s)	1085
BsaJI	CCNNGG	8 cut(s)	720, 1174, 1228, 1437, 1438, 1564, 1680, 1746
BsaXI	ACNNNNNCTCC	4 cut(s)	298, 328, 1205, 1235
Bsc4I	CCNNNNNNNGG	3 cut(s)	57, 1058, 1230
Bse118I	RCCGGY	1 cut(s)	672
Bse1I	ACTGG	4 cut(s)	510, 526, 890, 926
Bse3DI	GCAATG	4 cut(s)	412, 1011, 1941, 1986
BseBI	CCWGG	3 cut(s)	721, 755, 1439
BseCI	ATCGAT	1 cut(s)	1386
BseDI	CCNNGG	8 cut(s)	720, 1174, 1228, 1437, 1438, 1564, 1680, 1746
BseLI	CCNNNNNNNGG	3 cut(s)	57, 1058, 1230
BseMI	GCAATG	4 cut(s)	412, 1011, 1941, 1986
BseMII	CTCAG	4 cut(s)	290, 1419, 1863, 2047
BseNI	ACTGG	4 cut(s)	510, 526, 890, 926
BseRI	GAGGAG	1 cut(s)	1862
BseSI	GKGCMC	1 cut(s)	1447
BseXI	GCAGC	4 cut(s)	223, 507, 1077, 1644
BseYI	CCCAGC	2 cut(s)	239, 1256
Bsh1236I	CGCG	1 cut(s)	6
BshFI	GGCC	7 cut(s)	105, 672, 1050, 1562, 1745, 1880, 2014
BshNI	GGYRCC	2 cut(s)	1442, 1676
BshVI	ATCGAT	1 cut(s)	1386
BsiHKAI	GWGCWC	1 cut(s)	1715
BsiSI	CCGG	3 cut(s)	673, 1059, 1218
BslFI	GGGAC	1 cut(s)	1246
BslI	CCNNNNNNNGG	3 cut(s)	57, 1058, 1230
BsmAI	GTCTC	2 cut(s)	242, 894
BsmBI	CGTCTC	1 cut(s)	242
BsmFI	GGGAC	1 cut(s)	1246
BsmI	GAATGC	3 cut(s)	609, 968, 1006
BsnI	GGCC	7 cut(s)	105, 672, 1050, 1562, 1745, 1880, 2014
Bsp1286I	GDGCHC	5 cut(s)	786, 1020, 1447, 1715, 1784
Bsp1407I	TGTACA	1 cut(s)	1371
Bsp143I	GATC	6 cut(s)	1035, 1305, 1539, 1568, 1579, 1909
Bsp1720I	GCTNAGC	1 cut(s)	1091
Bsp19I	CCATGG	1 cut(s)	1564
BspANI	GGCC	7 cut(s)	105, 672, 1050, 1562, 1745, 1880, 2014
BspCNI	CTCAG	4 cut(s)	291, 1420, 1864, 2046
BspDI	ATCGAT	1 cut(s)	1386
BspFNI	CGCG	1 cut(s)	6
BspLI	GGNNCC	6 cut(s)	1222, 1396, 1444, 1570, 1678, 1781
BspMAI	CTGCAG	1 cut(s)	1662
BspMI	ACCTGC	1 cut(s)	176
BspPI	GGATC	2 cut(s)	1563, 1576
BspQI	GCTCTTC	1 cut(s)	1703
BspT107I	GGYRCC	2 cut(s)	1442, 1676
BsrDI	GCAATG	4 cut(s)	412, 1011, 1941, 1986
BsrFI	RCCGGY	1 cut(s)	672
BsrGI	TGTACA	1 cut(s)	1371
BsrI	ACTGG	4 cut(s)	510, 526, 890, 926
BssAI	RCCGGY	1 cut(s)	672
BssECI	CCNNGG	8 cut(s)	720, 1174, 1228, 1437, 1438, 1564, 1680, 1746
BssMI	GATC	6 cut(s)	1035, 1305, 1539, 1568, 1579, 1909
BssNAI	GTATAC	1 cut(s)	895
BssNI	GRCGYC	1 cut(s)	1085
BssT1I	CCWWGG	4 cut(s)	1174, 1564, 1680, 1746
Bst1107I	GTATAC	1 cut(s)	895
Bst2UI	CCWGG	3 cut(s)	721, 755, 1439
Bst4CI	ACNGT	9 cut(s)	229, 589, 597, 644, 1159, 1272, 1520, 1700, 1813
Bst6I	CTCTTC	1 cut(s)	1703
BstACI	GRCGYC	1 cut(s)	1085
BstAPI	GCANNNNNTGC	1 cut(s)	143
BstAUI	TGTACA	1 cut(s)	1371
BstBAI	YACGTR	1 cut(s)	907
BstC8I	GCNNGC	5 cut(s)	333, 966, 1128, 1830, 2049
BstDEI	CTNAG	5 cut(s)	299, 1091, 1428, 1872, 2033
BstDSI	CCRYGG	2 cut(s)	1228, 1564
BstFNI	CGCG	1 cut(s)	6
BstHHI	GCGC	2 cut(s)	6, 649
BstKTI	GATC	6 cut(s)	1038, 1308, 1542, 1571, 1582, 1912
BstMAI	GTCTC	2 cut(s)	242, 894
BstMBI	GATC	6 cut(s)	1035, 1305, 1539, 1568, 1579, 1909
BstMWI	GCNNNNNNNGC	6 cut(s)	143, 332, 848, 1136, 1829, 2053
BstNI	CCWGG	3 cut(s)	721, 755, 1439
BstNSI	RCATGY	2 cut(s)	1792, 2117
BstSCI	CCNGG	3 cut(s)	719, 753, 1437
BstSFI	CTRYAG	3 cut(s)	82, 732, 1658
BstSLI	GKGCMC	1 cut(s)	1447
BstUI	CGCG	1 cut(s)	6
BstV1I	GCAGC	4 cut(s)	223, 507, 1077, 1644
BstV2I	GAAGAC	1 cut(s)	438
BstX2I	RGATCY	1 cut(s)	1568
BstYI	RGATCY	1 cut(s)	1568
BstZ17I	GTATAC	1 cut(s)	895
Bsu15I	ATCGAT	1 cut(s)	1386
BsuI	GTATCC	2 cut(s)	879, 1508
BsuRI	GGCC	7 cut(s)	105, 672, 1050, 1562, 1745, 1880, 2014
BsuTUI	ATCGAT	1 cut(s)	1386
BtgI	CCRYGG	2 cut(s)	1228, 1564
BtgZI	GCGATG	1 cut(s)	1475
BtrI	CACGTC	1 cut(s)	1705
BtsI	GCAGTG	2 cut(s)	456, 959
BtsIMutI	CAGTG	6 cut(s)	225, 456, 519, 649, 959, 1268
BveI	ACCTGC	1 cut(s)	176
Cac8I	GCNNGC	5 cut(s)	333, 966, 1128, 1830, 2049
CaiI	CAGNNNCTG	2 cut(s)	227, 298
CfoI	GCGC	2 cut(s)	6, 649
Cfr10I	RCCGGY	1 cut(s)	672
Cfr13I	GGNCC	4 cut(s)	103, 1049, 1561, 1878
ClaI	ATCGAT	1 cut(s)	1386
CseI	GACGC	1 cut(s)	1093
CsiI	ACCWGGT	1 cut(s)	753
Csp6I	GTAC	5 cut(s)	529, 1372, 1521, 1663, 1814
CspCI	CAANNNNNGTGG	4 cut(s)	472, 507, 1387, 1422
CviQI	GTAC	5 cut(s)	529, 1372, 1521, 1663, 1814
DdeI	CTNAG	5 cut(s)	299, 1091, 1428, 1872, 2033
DpnI	GATC	6 cut(s)	1037, 1307, 1541, 1570, 1581, 1911
DpnII	GATC	6 cut(s)	1035, 1305, 1539, 1568, 1579, 1909
EaeI	YGGCCR	1 cut(s)	1743
Eam1104I	CTCTTC	1 cut(s)	1703
EarI	CTCTTC	1 cut(s)	1703
Eco130I	CCWWGG	4 cut(s)	1174, 1564, 1680, 1746
Eco24I	GRGCYC	3 cut(s)	786, 1020, 1784
Eco32I	GATATC	2 cut(s)	290, 2083
Eco57I	CTGAAG	2 cut(s)	204, 1613
EcoO109I	RGGNCCY	1 cut(s)	1049
EcoRII	CCWGG	3 cut(s)	719, 753, 1437
EcoRV	GATATC	2 cut(s)	290, 2083
EcoT14I	CCWWGG	4 cut(s)	1174, 1564, 1680, 1746
EcoT22I	ATGCAT	2 cut(s)	139, 1385
EcoT38I	GRGCYC	3 cut(s)	786, 1020, 1784
ErhI	CCWWGG	4 cut(s)	1174, 1564, 1680, 1746
Esp3I	CGTCTC	1 cut(s)	242
FaqI	GGGAC	1 cut(s)	1246
FauI	CCCGC	1 cut(s)	419
FauNDI	CATATG	2 cut(s)	142, 337
FbaI	TGATCA	1 cut(s)	1579
FblI	GTMKAC	2 cut(s)	855, 894
Fnu4HI	GCNGC	9 cut(s)	44, 237, 411, 496, 840, 1066, 1088, 1314, 1658
FriOI	GRGCYC	3 cut(s)	786, 1020, 1784
Fsp4HI	GCNGC	9 cut(s)	44, 237, 411, 496, 840, 1066, 1088, 1314, 1658
FspBI	CTAG	2 cut(s)	1152, 1298
GlaI	GCGC	2 cut(s)	5, 648
GluI	GCNGC	9 cut(s)	44, 237, 411, 496, 840, 1066, 1088, 1314, 1658
GsaI	CCCAGC	2 cut(s)	243, 1260
GsuI	CTGGAG	1 cut(s)	1207
HaeIII	GGCC	7 cut(s)	105, 672, 1050, 1562, 1745, 1880, 2014
HapII	CCGG	3 cut(s)	673, 1059, 1218
HgaI	GACGC	1 cut(s)	1093
HhaI	GCGC	2 cut(s)	6, 649
Hin1I	GRCGYC	1 cut(s)	1085
Hin6I	GCGC	2 cut(s)	4, 647
HinP1I	GCGC	2 cut(s)	4, 647
HincII	GTYRAC	4 cut(s)	96, 856, 1083, 1245
HindII	GTYRAC	4 cut(s)	96, 856, 1083, 1245
HindIII	AAGCTT	1 cut(s)	1927
HpaI	GTTAAC	2 cut(s)	96, 1245
HpaII	CCGG	3 cut(s)	673, 1059, 1218
HphI	GGTGA	6 cut(s)	70, 557, 585, 709, 1544, 1688
Hpy166II	GTNNAC	7 cut(s)	96, 475, 856, 895, 1083, 1245, 1372
Hpy188I	TCNGA	5 cut(s)	294, 300, 1632, 1756, 1873
Hpy188III	TCNNGA	5 cut(s)	449, 515, 1027, 1183, 1456
Hpy8I	GTNNAC	7 cut(s)	96, 475, 856, 895, 1083, 1245, 1372
Hpy99I	CGWCG	2 cut(s)	1136, 2020
HpyAV	CCTTC	2 cut(s)	209, 1676
HpyCH4III	ACNGT	9 cut(s)	229, 589, 597, 644, 1159, 1272, 1520, 1700, 1813
HpyCH4IV	ACGT	5 cut(s)	14, 906, 1368, 1404, 1704
HpyF10VI	GCNNNNNNNGC	6 cut(s)	143, 332, 848, 1136, 1829, 2053
HpyF3I	CTNAG	5 cut(s)	299, 1091, 1428, 1872, 2033
HpySE526I	ACGT	5 cut(s)	14, 906, 1368, 1404, 1704
Hsp92I	GRCGYC	1 cut(s)	1085
HspAI	GCGC	2 cut(s)	4, 647
Ksp22I	TGATCA	1 cut(s)	1579
KspAI	GTTAAC	2 cut(s)	96, 1245
Kzo9I	GATC	6 cut(s)	1035, 1305, 1539, 1568, 1579, 1909
LguI	GCTCTTC	1 cut(s)	1703
LmnI	GCTCC	3 cut(s)	1226, 1394, 1779
Lsp1109I	GCAGC	4 cut(s)	223, 507, 1077, 1644
LweI	GCATC	4 cut(s)	146, 223, 1370, 1392
MabI	ACCWGGT	1 cut(s)	753
MaeI	CTAG	2 cut(s)	1152, 1298
MaeII	ACGT	5 cut(s)	14, 906, 1368, 1404, 1704
MaeIII	GTNAC	3 cut(s)	553, 1700, 1937
MalI	GATC	6 cut(s)	1037, 1307, 1541, 1570, 1581, 1911
MboI	GATC	6 cut(s)	1035, 1305, 1539, 1568, 1579, 1909
MboII	GAAGA	5 cut(s)	443, 949, 1257, 1368, 1720
MfeI	CAATTG	1 cut(s)	678
MflI	RGATCY	1 cut(s)	1568
MhlI	GDGCHC	5 cut(s)	786, 1020, 1447, 1715, 1784
MlsI	TGGCCA	1 cut(s)	1745
MluNI	TGGCCA	1 cut(s)	1745
MlyI	GAGTC	3 cut(s)	677, 1208, 1439
MmeI	TCCRAC	3 cut(s)	624, 711, 1333
MnlI	CCTC	8 cut(s)	167, 408, 1062, 1583, 1667, 1840, 1848, 2004
Mox20I	TGGCCA	1 cut(s)	1745
Mph1103I	ATGCAT	2 cut(s)	139, 1385
MscI	TGGCCA	1 cut(s)	1745
MseI	TTAA	8 cut(s)	95, 572, 990, 1244, 1413, 1931, 2094, 2119
MslI	CAYNNNNRTG	7 cut(s)	405, 461, 524, 771, 1279, 1674, 1998
Msp20I	TGGCCA	1 cut(s)	1745
MspA1I	CMGCKG	1 cut(s)	1832
MspI	CCGG	3 cut(s)	673, 1059, 1218
MspR9I	CCNGG	3 cut(s)	721, 755, 1439
MunI	CAATTG	1 cut(s)	678
Mva1269I	GAATGC	3 cut(s)	609, 968, 1006
MvaI	CCWGG	3 cut(s)	721, 755, 1439
MvnI	CGCG	1 cut(s)	6
MwoI	GCNNNNNNNGC	6 cut(s)	143, 332, 848, 1136, 1829, 2053
NcoI	CCATGG	1 cut(s)	1564
NdeI	CATATG	2 cut(s)	142, 337
NdeII	GATC	6 cut(s)	1035, 1305, 1539, 1568, 1579, 1909
NlaIV	GGNNCC	6 cut(s)	1222, 1396, 1444, 1570, 1678, 1781
NmuCI	GTSAC	2 cut(s)	553, 1700
NsiI	ATGCAT	2 cut(s)	139, 1385
NspI	RCATGY	2 cut(s)	1792, 2117
PaqCI	CACCTGC	1 cut(s)	176
PasI	CCCWGGG	1 cut(s)	1438
PciI	ACATGT	2 cut(s)	1788, 2113
PciSI	GCTCTTC	1 cut(s)	1703
PcsI	WCGNNNNNNNCGW	1 cut(s)	861
PctI	GAATGC	3 cut(s)	609, 968, 1006
PfeI	GAWTC	9 cut(s)	295, 354, 480, 737, 832, 1179, 1359, 1914, 2059
PflFI	GACNNNGTC	1 cut(s)	860
PkrI	GCNGC	9 cut(s)	45, 238, 412, 497, 841, 1067, 1089, 1315, 1659
PleI	GAGTC	3 cut(s)	677, 1208, 1438
PpsI	GAGTC	3 cut(s)	677, 1208, 1438
Ppu21I	YACGTR	1 cut(s)	907
PscI	ACATGT	2 cut(s)	1788, 2113
PshBI	ATTAAT	1 cut(s)	2094
Psp1406I	AACGTT	1 cut(s)	14
Psp6I	CCWGG	3 cut(s)	719, 753, 1437
PspFI	CCCAGC	2 cut(s)	239, 1256
PspGI	CCWGG	3 cut(s)	719, 753, 1437
PspN4I	GGNNCC	6 cut(s)	1222, 1396, 1444, 1570, 1678, 1781
PspPI	GGNCC	4 cut(s)	103, 1049, 1561, 1878
PsrI	GAACNNNNNNTAC	2 cut(s)	266, 298
PstI	CTGCAG	1 cut(s)	1662
PstNI	CAGNNNCTG	2 cut(s)	227, 298
PsuI	RGATCY	1 cut(s)	1568
PsyI	GACNNNGTC	1 cut(s)	860
PvuII	CAGCTG	1 cut(s)	1832
RsaI	GTAC	5 cut(s)	530, 1373, 1522, 1664, 1815
RsaNI	GTAC	5 cut(s)	529, 1372, 1521, 1663, 1814
RseI	CAYNNNNRTG	7 cut(s)	405, 461, 524, 771, 1279, 1674, 1998
SalI	GTCGAC	1 cut(s)	854
SapI	GCTCTTC	1 cut(s)	1703
SaqAI	TTAA	8 cut(s)	95, 572, 990, 1244, 1413, 1931, 2094, 2119
SatI	GCNGC	9 cut(s)	44, 237, 411, 496, 840, 1066, 1088, 1314, 1658
Sau3AI	GATC	6 cut(s)	1035, 1305, 1539, 1568, 1579, 1909
Sau96I	GGNCC	4 cut(s)	103, 1049, 1561, 1878
SchI	GAGTC	3 cut(s)	677, 1208, 1439
ScrFI	CCNGG	3 cut(s)	721, 755, 1439
SduI	GDGCHC	5 cut(s)	786, 1020, 1447, 1715, 1784
SexAI	ACCWGGT	1 cut(s)	753
SfaNI	GCATC	4 cut(s)	146, 223, 1370, 1392
SfcI	CTRYAG	3 cut(s)	82, 732, 1658
SmiMI	CAYNNNNRTG	7 cut(s)	405, 461, 524, 771, 1279, 1674, 1998
SmlI	CTYRAG	5 cut(s)	617, 779, 1053, 1650, 2042
SmoI	CTYRAG	5 cut(s)	617, 779, 1053, 1650, 2042
SspMI	CTAG	2 cut(s)	1152, 1298
StyD4I	CCNGG	3 cut(s)	719, 753, 1437
StyI	CCWWGG	4 cut(s)	1174, 1564, 1680, 1746
TaaI	ACNGT	9 cut(s)	229, 589, 597, 644, 1159, 1272, 1520, 1700, 1813
TaiI	ACGT	5 cut(s)	17, 909, 1371, 1407, 1707
TaqI	TCGA	7 cut(s)	855, 864, 1020, 1386, 1912, 1920, 2018
TatI	WGTACW	2 cut(s)	1371, 1520
TauI	GCSGC	5 cut(s)	46, 413, 842, 1090, 1316
TfiI	GAWTC	9 cut(s)	295, 354, 480, 737, 832, 1179, 1359, 1914, 2059
Tru1I	TTAA	8 cut(s)	95, 572, 990, 1244, 1413, 1931, 2094, 2119
Tru9I	TTAA	8 cut(s)	95, 572, 990, 1244, 1413, 1931, 2094, 2119
TscAI	CASTG	6 cut(s)	232, 463, 526, 649, 966, 1275
TseFI	GTSAC	2 cut(s)	553, 1700
TseI	GCWGC	4 cut(s)	236, 495, 1065, 1657
Tsp45I	GTSAC	2 cut(s)	553, 1700
TspDTI	ATGAA	7 cut(s)	103, 582, 1330, 1658, 1877, 2010, 2051
TspGWI	ACGGA	2 cut(s)	166, 300
TspRI	CASTG	6 cut(s)	232, 463, 526, 649, 966, 1275
Tth111I	GACNNNGTC	1 cut(s)	860
VspI	ATTAAT	1 cut(s)	2094
XapI	RAATTY	3 cut(s)	22, 725, 1964
XceI	RCATGY	2 cut(s)	1792, 2117
XmiI	GTMKAC	2 cut(s)	855, 894
XspI	CTAG	2 cut(s)	1152, 1298
Zsp2I	ATGCAT	2 cut(s)	139, 1385

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.