Prupe.3G294700_v2.0.a1

Belongs to the uridine kinase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
26272889 .. 26276820
3932 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G294700.1

Sequence Viewer

Length: 1419 bp
ATGGATTCTTCTGCCTCTGTGGATGCATTGAGCAATGGCTTCAAAAACCACCTTTCTTTGTATCAATCTCATAATAATAATAATGTTGTCTCCAACCCCAGAGTCAAACCTAAGCAACCCTTTTTCATTGGTGTTGCTGGTGGCACTGCATCTGGCAAAACTACCGTTTGCAACATGATCATCTCCCAACTGCGTGATCAGCGCGTTGTTCTCGTAAATCAAGATTCATTTTATCACTCCTTGAATGCTGAGAAGTTGAAAAGGGTCCATGAGTACAATTTTGACCATCCTGAGGCCTTCGATACAGAGCATATGCTTTCTTGTATGGAGCAAATAAAGCGTGGACAGGCAGTGACCATCCCAAATTATGATTTTAAGACCCATCAAAGCATAGAACCAGCTTGCAAGGTTAACCCCTCAGACATCATCATCTTAGAAGGAATATTAGTTCTTCATGATCCTCGTGTCCGCGATCTTATGAACATGAAAATCTTCGTAGACACAGATTCTGATGTACGTCTTTCTCGGAGAATTCAACGTGACACTGTTGAAAGAGGCAGAAATATCGAGAATGTGCTTGACCAATACGCCAGATTCGTGAAGCCTAGCTTCGAAGAATTCATATTGCCATCCAAAAAGTATGCAGATATCATAATCCCTCGAGGAGGAGATAATGATGTTGCAATTGATCTGATAGTACAACATATTCATACAAAGCTTGGCCAGCATGAACTCTGTAAAATATATCCAAACGTTGTCGTTATATTTTCTACATTTCAGATACGGGGAATGCACACCCTAATTCGTGATGCCAAAACAACAAAGCATGACTTTGTCTTCTATGCAGACCGACTGATTCGCCTGGTTGTGGAGCATGGACTAGGTCATCTCCCCTTCAAGGAAAAGCAGGTTATTACTCCAACGGGATCTGTATACAGTGGAGTTGTTTTCTACAAACGGTTGTGCGGGGTTTCAGTCATTAGAAGTGGAGAAAGCATGGAGAATGCACTCAGAGCATGTGTCAAGGGAATAAAAATTGGAAAAATCCTCATCCATGGAGAGGGTAACAATGGTCGAGAGTTGATCTATGAGAAGCTACCAAAAGACATCTCAAGCCGCCATGTGTTATTTCTTGATCCTGTTCTGGCTTCAGGAAACTCTGCCATCAACGCTATATCTCTGCTCCTCAGTAAGGGTGTACCAGAATCCAACATCATCTTCCTTAACCTTATAGCAGCACCGGATGGAATACATGCCCTCTGCAAGAGATTTCCAAAGCTAAAACTTGTTACATCAGAGATTGACGAATCTTTGAACGAAGATTTACGTGTGATCCCCGGCATGGGGGAGTTTGGAGACCGTTACTTTGGTACAGATAATGAAGACGGTACCATTTCAAATTCAACGACACCCAAATAA

Protein Analysis

473

Amino Acids

52.95

Weight (kDa)

8.07

Isoelectric Point (pI)

37.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 660
Acc36I ACCTGC 1 cut(s) 898
Acc65I GGTACC 1 cut(s) 1388
AccB1I GGYRCC 1 cut(s) 1388
AccI GTMKAC 2 cut(s) 498, 933
AccII CGCG 2 cut(s) 204, 471
AciI CCGC 3 cut(s) 469, 966, 1117
AclI AACGTT 1 cut(s) 753
AclWI GGATC 4 cut(s) 452, 934, 1130, 1327
AcoI YGGCCR 1 cut(s) 721
AcsI RAATTY 3 cut(s) 531, 617, 1399
AcuI CTGAAG 1 cut(s) 1134
AfaI GTAC 6 cut(s) 275, 516, 699, 1200, 1372, 1390
AfiI CCNNNNNNNGG 9 cut(s) 292, 665, 868, 898, 1060, 1192, 1342, 1343, 1344
AflIII ACRYGT 1 cut(s) 1327
AgsI TTSAA 9 cut(s) 43, 244, 259, 536, 551, 898, 1315, 1398, 1404
AjnI CCWGG 1 cut(s) 861
AjuI GAANNNNNNNTTGG 2 cut(s) 1202, 1234
AloI GAACNNNNNNTCC 2 cut(s) 432, 464
AluBI AGCT 5 cut(s) 401, 609, 718, 1096, 1279
AluI AGCT 5 cut(s) 401, 609, 718, 1096, 1279
Alw26I GTCTC 2 cut(s) 94, 1350
AlwI GGATC 4 cut(s) 452, 934, 1130, 1327
AlwNI CAGNNNCTG 1 cut(s) 509
Ama87I CYCGRG 1 cut(s) 660
AoxI GGCC 2 cut(s) 294, 721
ApeKI GCWGC 1 cut(s) 1235
ApoI RAATTY 3 cut(s) 531, 617, 1399
ArsI GACNNNNNNTTYG 2 cut(s) 1349, 1381
Asp700I GAANNNNTTC 1 cut(s) 491
Asp718I GGTACC 1 cut(s) 1388
AspLEI GCGC 1 cut(s) 204
AspS9I GGNCC 1 cut(s) 265
AsuC2I CCSGG 1 cut(s) 1338
AsuII TTCGAA 1 cut(s) 612
AvaI CYCGRG 1 cut(s) 660
AvaII GGWCC 1 cut(s) 265
AxyI CCTNAGG 1 cut(s) 291
BalI TGGCCA 1 cut(s) 723
BanI GGYRCC 1 cut(s) 1388
BauI CACGAG 1 cut(s) 462
BbsI GAAGAC 2 cut(s) 829, 1389
BbvI GCAGC 1 cut(s) 1247
BccI CCATC 6 cut(s) 294, 365, 390, 637, 1172, 1238
BcgI CGANNNNNNTGC 2 cut(s) 547, 581
BciT130I CCWGG 1 cut(s) 863
BclI TGATCA 2 cut(s) 177, 196
BcnI CCSGG 1 cut(s) 1338
BcoDI GTCTC 2 cut(s) 94, 1350
BfaI CTAG 2 cut(s) 606, 881
BfuAI ACCTGC 1 cut(s) 898
BisI GCNGC 2 cut(s) 1117, 1236
BlsI GCNGC 2 cut(s) 1118, 1237
Bme1390I CCNGG 2 cut(s) 863, 1338
Bme18I GGWCC 1 cut(s) 265
BmeT110I CYCGRG 1 cut(s) 660
BmgT120I GGNCC 1 cut(s) 265
BmiI GGNNCC 2 cut(s) 266, 1390
BmrFI CCNGG 2 cut(s) 863, 1338
BmsI GCATC 3 cut(s) 13, 158, 799
BpiI GAAGAC 2 cut(s) 829, 1389
Bpu10I CCTNAGC 1 cut(s) 111
Bpu14I TTCGAA 1 cut(s) 612
BpuEI CTTGAG 1 cut(s) 1096
BpuMI CCSGG 1 cut(s) 1338
BsaAI YACGTR 1 cut(s) 1328
BsaI GGTCTC 1 cut(s) 1350
BsaJI CCNNGG 2 cut(s) 1054, 1336
BsaWI WCCGGW 1 cut(s) 1240
Bsc4I CCNNNNNNNGG 9 cut(s) 292, 665, 868, 898, 1060, 1192, 1342, 1343, 1344
Bse21I CCTNAGG 1 cut(s) 291
Bse3DI GCAATG 1 cut(s) 40
BseBI CCWGG 1 cut(s) 863
BseDI CCNNGG 2 cut(s) 1054, 1336
BseGI GGATG 6 cut(s) 28, 286, 357, 629, 1050, 1249
BseLI CCNNNNNNNGG 9 cut(s) 292, 665, 868, 898, 1060, 1192, 1342, 1343, 1344
BseMI GCAATG 1 cut(s) 40
BseMII CTCAG 5 cut(s) 240, 282, 432, 1024, 1201
BseRI GAGGAG 3 cut(s) 678, 681, 1175
BseXI GCAGC 1 cut(s) 1247
Bsh1236I CGCG 2 cut(s) 204, 471
BshFI GGCC 2 cut(s) 296, 723
BshNI GGYRCC 1 cut(s) 1388
BsiHKCI CYCGRG 1 cut(s) 660
BsiSI CCGG 2 cut(s) 1241, 1338
BslI CCNNNNNNNGG 9 cut(s) 292, 665, 868, 898, 1060, 1192, 1342, 1343, 1344
BsmAI GTCTC 2 cut(s) 94, 1350
BsmI GAATGC 3 cut(s) 250, 795, 1009
BsnI GGCC 2 cut(s) 296, 723
Bso31I GGTCTC 1 cut(s) 1350
BsoBI CYCGRG 1 cut(s) 660
Bsp119I TTCGAA 1 cut(s) 612
Bsp143I GATC 9 cut(s) 177, 196, 457, 472, 688, 926, 1083, 1135, 1332
Bsp19I CCATGG 1 cut(s) 1054
BspACI CCGC 3 cut(s) 469, 966, 1117
BspANI GGCC 2 cut(s) 296, 723
BspCNI CTCAG 5 cut(s) 241, 283, 431, 1023, 1200
BspFNI CGCG 2 cut(s) 204, 471
BspHI TCATGA 1 cut(s) 454
BspLI GGNNCC 2 cut(s) 266, 1390
BspMI ACCTGC 1 cut(s) 898
BspPI GGATC 4 cut(s) 452, 934, 1130, 1327
BspT104I TTCGAA 1 cut(s) 612
BspT107I GGYRCC 1 cut(s) 1388
BspTNI GGTCTC 1 cut(s) 1350
BsrDI GCAATG 1 cut(s) 40
BssECI CCNNGG 2 cut(s) 1054, 1336
BssMI GATC 9 cut(s) 177, 196, 457, 472, 688, 926, 1083, 1135, 1332
BssNAI GTATAC 1 cut(s) 934
BssSI CACGAG 1 cut(s) 462
BssT1I CCWWGG 1 cut(s) 1054
Bst1107I GTATAC 1 cut(s) 934
Bst2BI CACGAG 1 cut(s) 462
Bst2UI CCWGG 1 cut(s) 863
Bst4CI ACNGT 6 cut(s) 166, 547, 938, 960, 1361, 1388
BstBAI YACGTR 1 cut(s) 1328
BstBI TTCGAA 1 cut(s) 612
BstC8I GCNNGC 2 cut(s) 403, 725
BstDEI CTNAG 7 cut(s) 111, 249, 291, 418, 433, 1010, 1187
BstDSI CCRYGG 1 cut(s) 1054
BstENI CCTNNNNNAGG 2 cut(s) 663, 1190
BstF5I GGATG 6 cut(s) 28, 286, 357, 629, 1050, 1249
BstFNI CGCG 2 cut(s) 204, 471
BstHHI GCGC 1 cut(s) 204
BstKTI GATC 9 cut(s) 180, 199, 460, 475, 691, 929, 1086, 1138, 1335
BstMAI GTCTC 2 cut(s) 94, 1350
BstMBI GATC 9 cut(s) 177, 196, 457, 472, 688, 926, 1083, 1135, 1332
BstMWI GCNNNNNNNGC 5 cut(s) 199, 337, 724, 1013, 1169
BstNI CCWGG 1 cut(s) 863
BstNSI RCATGY 2 cut(s) 1020, 1256
BstSCI CCNGG 2 cut(s) 861, 1336
BstUI CGCG 2 cut(s) 204, 471
BstV1I GCAGC 1 cut(s) 1247
BstV2I GAAGAC 2 cut(s) 829, 1389
BstX2I RGATCY 1 cut(s) 926
BstYI RGATCY 1 cut(s) 926
BstZ17I GTATAC 1 cut(s) 934
Bsu36I CCTNAGG 1 cut(s) 291
BsuRI GGCC 2 cut(s) 296, 723
BtgI CCRYGG 1 cut(s) 1054
BtsCI GGATG 6 cut(s) 28, 286, 357, 629, 1050, 1249
BtsI GCAGTG 2 cut(s) 144, 357
BtsIMutI CAGTG 4 cut(s) 144, 357, 543, 943
BveI ACCTGC 1 cut(s) 898
Cac8I GCNNGC 2 cut(s) 403, 725
CaiI CAGNNNCTG 1 cut(s) 509
CciI TCATGA 1 cut(s) 454
CfoI GCGC 1 cut(s) 204
Cfr13I GGNCC 1 cut(s) 265
Csp6I GTAC 6 cut(s) 274, 515, 698, 1199, 1371, 1389
CviQI GTAC 6 cut(s) 274, 515, 698, 1199, 1371, 1389
DdeI CTNAG 7 cut(s) 111, 249, 291, 418, 433, 1010, 1187
DpnI GATC 9 cut(s) 179, 198, 459, 474, 690, 928, 1085, 1137, 1334
DpnII GATC 9 cut(s) 177, 196, 457, 472, 688, 926, 1083, 1135, 1332
EaeI YGGCCR 1 cut(s) 721
Eco130I CCWWGG 1 cut(s) 1054
Eco147I AGGCCT 1 cut(s) 296
Eco31I GGTCTC 1 cut(s) 1350
Eco32I GATATC 1 cut(s) 649
Eco47I GGWCC 1 cut(s) 265
Eco57I CTGAAG 1 cut(s) 1134
Eco81I CCTNAGG 1 cut(s) 291
Eco88I CYCGRG 1 cut(s) 660
EcoNI CCTNNNNNAGG 2 cut(s) 663, 1190
EcoRI GAATTC 2 cut(s) 531, 617
EcoRII CCWGG 1 cut(s) 861
EcoRV GATATC 1 cut(s) 649
EcoT14I CCWWGG 1 cut(s) 1054
EcoT22I ATGCAT 1 cut(s) 28
ErhI CCWWGG 1 cut(s) 1054
FalI AAGNNNNNCTT 6 cut(s) 104, 136, 593, 625, 815, 847
FauI CCCGC 1 cut(s) 959
FauNDI CATATG 1 cut(s) 312
FbaI TGATCA 2 cut(s) 177, 196
FblI GTMKAC 2 cut(s) 498, 933
Fnu4HI GCNGC 2 cut(s) 1117, 1236
FokI GGATG 6 cut(s) 35, 273, 344, 616, 1037, 1256
Fsp4HI GCNGC 2 cut(s) 1117, 1236
FspBI CTAG 2 cut(s) 606, 881
GlaI GCGC 1 cut(s) 203
GluI GCNGC 2 cut(s) 1117, 1236
HaeIII GGCC 2 cut(s) 296, 723
HapII CCGG 2 cut(s) 1241, 1338
HhaI GCGC 1 cut(s) 204
Hin6I GCGC 1 cut(s) 202
HinP1I GCGC 1 cut(s) 202
HincII GTYRAC 1 cut(s) 412
HindII GTYRAC 1 cut(s) 412
HindIII AAGCTT 1 cut(s) 716
HinfI GANTC 8 cut(s) 5, 102, 224, 506, 594, 856, 1205, 1307
HpaI GTTAAC 1 cut(s) 412
HpaII CCGG 2 cut(s) 1241, 1338
Hpy166II GTNNAC 5 cut(s) 344, 412, 499, 934, 1199
Hpy188I TCNGA 7 cut(s) 421, 511, 528, 693, 780, 1013, 1297
Hpy188III TCNNGA 9 cut(s) 221, 290, 455, 568, 598, 806, 1076, 1133, 1152
Hpy8I GTNNAC 5 cut(s) 344, 412, 499, 934, 1199
HpyAV CCTTC 3 cut(s) 307, 431, 904
HpyCH4III ACNGT 6 cut(s) 166, 547, 938, 960, 1361, 1388
HpyCH4IV ACGT 4 cut(s) 517, 538, 753, 1327
HpyF10VI GCNNNNNNNGC 5 cut(s) 199, 337, 724, 1013, 1169
HpyF3I CTNAG 7 cut(s) 111, 249, 291, 418, 433, 1010, 1187
HpySE526I ACGT 4 cut(s) 517, 538, 753, 1327
HspAI GCGC 1 cut(s) 202
KpnI GGTACC 1 cut(s) 1392
Ksp22I TGATCA 2 cut(s) 177, 196
KspAI GTTAAC 1 cut(s) 412
Kzo9I GATC 9 cut(s) 177, 196, 457, 472, 688, 926, 1083, 1135, 1332
LmnI GCTCC 3 cut(s) 328, 871, 1188
Lsp1109I GCAGC 1 cut(s) 1247
LweI GCATC 3 cut(s) 13, 158, 799
MaeI CTAG 2 cut(s) 606, 881
MaeII ACGT 4 cut(s) 517, 538, 753, 1327
MaeIII GTNAC 5 cut(s) 352, 539, 1064, 1288, 1361
MalI GATC 9 cut(s) 179, 198, 459, 474, 690, 928, 1085, 1137, 1334
MboI GATC 9 cut(s) 177, 196, 457, 472, 688, 926, 1083, 1135, 1332
MboII GAAGA 7 cut(s) 443, 484, 626, 829, 1210, 1331, 1394
MfeI CAATTG 1 cut(s) 684
MflI RGATCY 1 cut(s) 926
MlsI TGGCCA 1 cut(s) 723
MluCI AATT 8 cut(s) 277, 364, 531, 617, 684, 801, 1035, 1399
MluNI TGGCCA 1 cut(s) 723
MlyI GAGTC 1 cut(s) 111
MmeI TCCRAC 3 cut(s) 117, 944, 1233
Mox20I TGGCCA 1 cut(s) 723
Mph1103I ATGCAT 1 cut(s) 28
MroXI GAANNNNTTC 1 cut(s) 491
MscI TGGCCA 1 cut(s) 723
MseI TTAA 3 cut(s) 375, 411, 1224
Msp20I TGGCCA 1 cut(s) 723
MspI CCGG 2 cut(s) 1241, 1338
MspR9I CCNGG 2 cut(s) 863, 1338
MunI CAATTG 1 cut(s) 684
Mva1269I GAATGC 3 cut(s) 250, 795, 1009
MvaI CCWGG 1 cut(s) 863
MvnI CGCG 2 cut(s) 204, 471
MwoI GCNNNNNNNGC 5 cut(s) 199, 337, 724, 1013, 1169
NciI CCSGG 1 cut(s) 1338
NcoI CCATGG 1 cut(s) 1054
NdeI CATATG 1 cut(s) 312
NdeII GATC 9 cut(s) 177, 196, 457, 472, 688, 926, 1083, 1135, 1332
NlaIV GGNNCC 2 cut(s) 266, 1390
NmuCI GTSAC 2 cut(s) 352, 539
NsiI ATGCAT 1 cut(s) 28
NspI RCATGY 2 cut(s) 1020, 1256
NspV TTCGAA 1 cut(s) 612
PaeR7I CTCGAG 1 cut(s) 660
PagI TCATGA 1 cut(s) 454
PceI AGGCCT 1 cut(s) 296
PcsI WCGNNNNNNNCGW 1 cut(s) 594
PctI GAATGC 3 cut(s) 250, 795, 1009
PdmI GAANNNNTTC 1 cut(s) 491
PfeI GAWTC 7 cut(s) 5, 224, 506, 594, 856, 1205, 1307
PflFI GACNNNGTC 2 cut(s) 833, 882
PkrI GCNGC 2 cut(s) 1118, 1237
PleI GAGTC 1 cut(s) 110
PpsI GAGTC 1 cut(s) 110
Ppu21I YACGTR 1 cut(s) 1328
Psp1406I AACGTT 1 cut(s) 753
Psp6I CCWGG 1 cut(s) 861
PspGI CCWGG 1 cut(s) 861
PspN4I GGNNCC 2 cut(s) 266, 1390
PspPI GGNCC 1 cut(s) 265
PspXI VCTCGAGB 1 cut(s) 660
PstNI CAGNNNCTG 1 cut(s) 509
PsuI RGATCY 1 cut(s) 926
PsyI GACNNNGTC 2 cut(s) 833, 882
RsaI GTAC 6 cut(s) 275, 516, 699, 1200, 1372, 1390
RsaNI GTAC 6 cut(s) 274, 515, 698, 1199, 1371, 1389
SaqAI TTAA 3 cut(s) 375, 411, 1224
SatI GCNGC 2 cut(s) 1117, 1236
Sau3AI GATC 9 cut(s) 177, 196, 457, 472, 688, 926, 1083, 1135, 1332
Sau96I GGNCC 1 cut(s) 265
SchI GAGTC 1 cut(s) 111
ScrFI CCNGG 2 cut(s) 863, 1338
SfaNI GCATC 3 cut(s) 13, 158, 799
Sfr274I CTCGAG 1 cut(s) 660
SfuI TTCGAA 1 cut(s) 612
SinI GGWCC 1 cut(s) 265
SlaI CTCGAG 1 cut(s) 660
SmlI CTYRAG 2 cut(s) 660, 1111
SmoI CTYRAG 2 cut(s) 660, 1111
Sse9I AATT 8 cut(s) 277, 364, 531, 617, 684, 801, 1035, 1399
SseBI AGGCCT 1 cut(s) 296
SsiI CCGC 3 cut(s) 469, 966, 1117
SspI AATATT 1 cut(s) 444
SspMI CTAG 2 cut(s) 606, 881
StuI AGGCCT 1 cut(s) 296
StyD4I CCNGG 2 cut(s) 861, 1336
StyI CCWWGG 1 cut(s) 1054
TaaI ACNGT 6 cut(s) 166, 547, 938, 960, 1361, 1388
TaiI ACGT 4 cut(s) 520, 541, 756, 1330
TaqI TCGA 5 cut(s) 300, 567, 612, 661, 1075
TaqII GACCGA 1 cut(s) 864
TasI AATT 8 cut(s) 277, 364, 531, 617, 684, 801, 1035, 1399
TatI WGTACW 2 cut(s) 273, 697
TauI GCSGC 1 cut(s) 1119
TfiI GAWTC 7 cut(s) 5, 224, 506, 594, 856, 1205, 1307
Tru1I TTAA 3 cut(s) 375, 411, 1224
Tru9I TTAA 3 cut(s) 375, 411, 1224
TscAI CASTG 4 cut(s) 151, 357, 550, 943
TseFI GTSAC 2 cut(s) 352, 539
TseI GCWGC 1 cut(s) 1235
Tsp45I GTSAC 2 cut(s) 352, 539
TspDTI ATGAA 9 cut(s) 115, 216, 443, 494, 500, 610, 698, 744, 1395
TspRI CASTG 4 cut(s) 151, 357, 550, 943
Tth111I GACNNNGTC 2 cut(s) 833, 882
VpaK11BI GGWCC 1 cut(s) 265
XagI CCTNNNNNAGG 2 cut(s) 663, 1190
XapI RAATTY 3 cut(s) 531, 617, 1399
XceI RCATGY 2 cut(s) 1020, 1256
XhoI CTCGAG 1 cut(s) 660
XmiI GTMKAC 2 cut(s) 498, 933
XmnI GAANNNNTTC 1 cut(s) 491
XspI CTAG 2 cut(s) 606, 881
Zsp2I ATGCAT 1 cut(s) 28
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.