MD10G1118700.v1.1

No description available

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Forward (+)
19591935 .. 19592577
643 bp
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UTR
Exon/CDS
Intron
MD10G1118700.v1.1.491

Sequence Viewer

Length: 138 bp
ATGATTTTTGGGATTATTTTTAGCCCCACAAATGCCCCCACATCTACTGGGCTGCTCGCAGGAAAGGGTTGGAGGTGTAGAAATCCAAAGCTACACAATTTAAGAGCCATGGGGCTTGAAGTAATGTCATGGGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

46

Amino Acids

4.99

Weight (kDa)

10.04

Isoelectric Point (pI)

35.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 119
AluBI AGCT 1 cut(s) 91
AluI AGCT 1 cut(s) 91
ApeKI GCWGC 1 cut(s) 52
BbvI GCAGC 1 cut(s) 39
BisI GCNGC 1 cut(s) 53
BlsI GCNGC 1 cut(s) 54
BmrI ACTGGG 1 cut(s) 57
BmuI ACTGGG 1 cut(s) 57
BsaJI CCNNGG 1 cut(s) 108
Bse1I ACTGG 1 cut(s) 52
BseDI CCNNGG 1 cut(s) 108
BseNI ACTGG 1 cut(s) 52
BseXI GCAGC 1 cut(s) 39
Bsp19I CCATGG 1 cut(s) 108
BsrI ACTGG 1 cut(s) 52
BssECI CCNNGG 1 cut(s) 108
BssT1I CCWWGG 1 cut(s) 108
BstC8I GCNNGC 1 cut(s) 57
BstDSI CCRYGG 1 cut(s) 108
BstV1I GCAGC 1 cut(s) 39
BtgI CCRYGG 1 cut(s) 108
Cac8I GCNNGC 1 cut(s) 57
CviAII CATG 2 cut(s) 109, 129
CviJI RGCY 5 cut(s) 24, 52, 91, 107, 115
CviKI_1 RGCY 5 cut(s) 24, 52, 91, 107, 115
Eco130I CCWWGG 1 cut(s) 108
EcoT14I CCWWGG 1 cut(s) 108
ErhI CCWWGG 1 cut(s) 108
FaeI CATG 2 cut(s) 112, 132
FaiI YATR 2 cut(s) 110, 130
FatI CATG 2 cut(s) 108, 128
Fnu4HI GCNGC 1 cut(s) 53
Fsp4HI GCNGC 1 cut(s) 53
GluI GCNGC 1 cut(s) 53
Hin1II CATG 2 cut(s) 112, 132
Hsp92II CATG 2 cut(s) 112, 132
LpnPI CCDG 2 cut(s) 33, 45
Lsp1109I GCAGC 1 cut(s) 39
MluCI AATT 1 cut(s) 97
MmeI TCCRAC 1 cut(s) 50
MnlI CCTC 1 cut(s) 66
MseI TTAA 2 cut(s) 101, 136
NcoI CCATGG 1 cut(s) 108
NlaIII CATG 2 cut(s) 112, 132
PkrI GCNGC 1 cut(s) 54
SaqAI TTAA 2 cut(s) 101, 136
SatI GCNGC 1 cut(s) 53
SetI ASST 2 cut(s) 77, 93
SgeI CNNG 5 cut(s) 60, 68, 72, 121, 128
Sse9I AATT 1 cut(s) 97
StyI CCWWGG 1 cut(s) 108
TasI AATT 1 cut(s) 97
Tru1I TTAA 2 cut(s) 101, 136
Tru9I TTAA 2 cut(s) 101, 136
TseI GCWGC 1 cut(s) 52
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.