Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0017374

Physical Location & Seq

Genomic Coordinates Forward (+)

19831375 .. 19835366

Gene Structure 3992 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g19090.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2919 bp

ATGCTCCTCACTTGCACGAGCCTAAACAGCACATGGCATAAAGTTCCTTGCATGCACGATCCTAAACCACACAGAGCAACAATGCTCCTTGTGACACGCAATGCTCTTTACCTGCATAAGCCTAAATTGCGCACGACACCAAATGCACCTCGCCTGCATGAGCCTAAACTACATACGATAACAAATACTCCTTATTCGCACGAGCTTAAAACGAAACACCCAACACTCATTGTTCACATGAGTTTAAAAGGCAACATTCAATACTCTTGCCCCATCAAAATCACCATCAAAACCGTCAAAATCATCAAAAAACAATCCATCACTCATTTGAACTATGTCATGACTTCATCCCTCATTAACCGAGGGTACGTAGGCAACTTGAAACTTCAAAACTTCAAGTACACAAATTCAAAATGTGAATACTTTATTTCTTTAAAGGAAGAATTTGGCTTAAGGTACAAAAAATGGAAGACATTACTTGAAAGCTATGTCCCTAAAACTATAGTGACAATCTTAAAGCAAGCCTTCCAAAGTCTTCAAAGTCTCCACATTGGTAGGAGACAAGGTGGGCACTTCCATGGCCGCACCTTTTTCTTAGAACACCTTGAAGTCGTGATGCTTCGATTTCTAACTGCTCTCGCTTACGCACCATTGTATCTAGACGTGCCTGGATGGAAGCTAAAGAAGTCTCTACGACTTGATAACCTTCCAAAACAAGCTTCTCTAACCTCTAGACTCAACTTCTTCAAGGAAATAACATGCAAGGAAGAATACTCAGTTGAGGTGGCCATAAGTTCGGCAATTTTGACTCTCAAGAATGAGGAATCAATGTTAAGGTTGTCAATCGCAGAAACAAGCTTCAACAAGTCATTCTTGAGCAACGCAAGGTCTTCTAGTGAGCACTTTGCAACATGTTGCTCAGTGCCACTAAGGTTCGGCCCTCTAAGAGAGATCTCAGAGCTAGCTAGCAAAGATGTTGGACACATGACGGGGTCTTGCATACCTTCACCTACACATAGCAAACTTGGGCAACTTGACGGATTTGGAACAAGCTATGCATCGGGCGGATCCCCAATCTCTTTGTCTGTAGGTAGATTACCTCCAAATAAAATCTTTCCTATCTCATCTGTTTGGGCACCATTTTCTTATTTCGCTTGCTGTAATTACTATTTGGTAGCTTCTTTGTCATTTCTAACCTCAGTAGCCTCTACAGGGGTAAAGGTCTTCTTCTTTGATTCATTCAATACTTGCATAGTACATTGTCAAGATGTGGCGGAATCAGATTTTTTGATACTTGACGGAAATGACAGCATCCAGCTTAATCAACCATGGTCTCCCAAGTATCCCATTACAACTGACGGTGTTTTGACGTCAAGTATGATGTGGCCGATGACAGTTGAGGTGTGTCCGTTGAACCTTGTGAGTAGGCGCATGATTTTGACTGCACTTCCATTATCAACCATTATTTTGTCGACTATAGCATGGGCTAGTTGGACAGATACTACCAATGCATCATCGTGTGGGAAGTCAATGCCTTCTGCATTCTACTCGGTGAAGCGAATGATGGCCTGCTGGATCTTTCTTTTTTTGGAGTTGTTGGTGGCCCACAAGTTCTTAGATTTGGCGAAGATGCAATTGATTCGAATGGTCTTGGTTAACGGTTATTCGTCATCGTCTATGTTCCTTCTAGGCTACGCAGCTGTTTTTCTAGGTAGTTCTTCCAAGTGTAGTAGTCATCGATTGTGTGACCGGGACCTCAGTGGAATGCGTAGTCTTTGGTGTGATCCAACTTGGAAGTATTTCCCTTTGATTGTTTCGGCAAGTAGTTCTTGGTCGTCGGGCCTTCTTTGGTCATGGGTCGGTCCATACGCTTGGCCTTTTGCTTGCTTTTACCAGACTACTTCTCGTCATCCTTCTTTTGAGCTACTGCTGACTCTTTTCGAGGCTACTCTGGCGCCTTGTCTGCTCGTCGAGCCTTGTCCCAAAATATCTTCTTTCATGATCAACTTTCTGAATAATGTCTATCCGATGATCTTTGACTATCTTCGCCTTCTTTGCTTTGAACCTCTTCACATAGTCATGGAGCGACTCTTTTGGGTTATTCTTCACGTTGAACAAGTGGTTAGAAAGATCTTCAAAACTCCAGGATCGATCGTGGTGGCAAGGTGTGAAACCAATCTTGTGCCTCGTCTTTGCTTCAAGTGCCTTTCTGGATCTCCATCCCTTTTGAAAGATGTGAAATGTGGCATGCTAAACTTGCGTGGAGGCTCTGCCTACTCGATCTCTTCCGTGAAGGGTGACCTGCTGATGTTGGTCACGTCATGTCGTAGCGCTTCATCGGTCACTTCATTGCGTTTGAAAAATCTACAAATGGACAAGAAAACGAAAAACCTTGGATGCGAGAGTTTTCTACAAGTGTGCGACTCAACCTCTCAAGGAAAACACCAATTTGTGAAAGAAAATTTCCGTCTTCTTCTTGGACAAAATTGCACCTACAAAACAAGTAACACCTTAAGTCAAGGCCAAGAGCCTCACGCCTCCACGATGAATGGGGGGGCGGAAAAGTGTTTGGAGAATTTAAAGAATTTTGTAAGAGAATTGGAATTGAGTTTTGGAGAAAATGAGGTGGTATTTATAGGGGTATGGCCGGCCCTTTTAGGAGGATGGGGACCGGCCACTTGGATTGTTTTTTGGGTGTTGTTCATAATTTTTGAAAGGAATGATTTGGGGTTACCTTGTGGAAAAGATTTGATGAGGATGGATGAAATAGTGAGTCATGATTATCCACTGCTCACGCGTAGGAGTTCCGATATTCCTCGAGGGTATTTTTATCCTTTTAACCCTGGAATCCACATGTCGCCTCCATATTTTTCTCGATTATTTTTGGCTCCACAACATGTAAAGACGATATCAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005829 GO:0006810 GO:0007275 GO:0008150 GO:0009791 GO:0009838 GO:0009908 GO:0009987 GO:0010227 GO:0012505 GO:0016043 GO:0016192 GO:0022414 GO:0022607 GO:0030135 GO:0030136 GO:0030276 GO:0030308 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0034622 GO:0035459 GO:0035652 GO:0040008 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043547 GO:0043933 GO:0044085 GO:0044093 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045926 GO:0048367 GO:0048437 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0060858 GO:0061458 GO:0065003 GO:0065007 GO:0065009 GO:0071840 GO:0090567 GO:0090630 GO:0097708 GO:0098791 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

ArfGap

Protein Analysis

973

Amino Acids

109.66

Weight (kDa)

9.25

Isoelectric Point (pI)

41.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017374)

Species	Orthologous Gene IDs
malus_domestica	MD10G1118700.v1.1 MD12G1200800.v1.1
pyrus_communis	pycom01g03700 pycom03g19090 pycom05g08120 pycom05g08150 pycom06g09060 pycom06g09070 pycom12g04950 pycom13g18790 pycom13g23440 pycom13g23740 pycom15g35050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1373
AbsI	CCTCGAGG	1 cut(s)	2817
Acc16I	TGCGCA	1 cut(s)	131
Acc36I	ACCTGC	2 cut(s)	120, 2310
AccB1I	GGYRCC	2 cut(s)	1135, 1954
AccI	GTMKAC	1 cut(s)	1472
AccII	CGCG	1 cut(s)	2797
AciI	CCGC	4 cut(s)	583, 1065, 1274, 2558
AclWI	GGATC	7 cut(s)	53, 1062, 1075, 1583, 1778, 2155, 2221
AcoI	YGGCCR	5 cut(s)	580, 786, 1385, 2645, 2673
AcsI	RAATTY	5 cut(s)	406, 443, 2461, 2575, 2584
AcyI	GRCGYC	2 cut(s)	1370, 1955
AfaI	GTAC	4 cut(s)	368, 401, 458, 1257
AfeI	AGCGCT	1 cut(s)	2332
AfiI	CCNNNNNNNGG	1 cut(s)	1212
AflII	CTTAAG	2 cut(s)	451, 2512
AflIII	ACRYGT	4 cut(s)	911, 2795, 2853, 2896
AjiI	CACGTC	2 cut(s)	664, 2319
AjnI	CCWGG	3 cut(s)	667, 2143, 2842
AjuI	GAANNNNNNNTTGG	4 cut(s)	703, 735, 2595, 2627
Alw21I	GWGCWC	1 cut(s)	903
Alw26I	GTCTC	4 cut(s)	548, 553, 693, 1338
AlwI	GGATC	7 cut(s)	53, 1062, 1075, 1583, 1778, 2155, 2221
Ama87I	CYCGRG	1 cut(s)	2817
Aor51HI	AGCGCT	1 cut(s)	2332
ApeKI	GCWGC	1 cut(s)	1697
ApoI	RAATTY	5 cut(s)	406, 443, 2461, 2575, 2584
Asp700I	GAANNNNTTC	2 cut(s)	1799, 2067
AspLEI	GCGC	4 cut(s)	132, 1431, 1957, 2333
AspS9I	GGNCC	7 cut(s)	938, 1603, 1753, 1840, 1862, 2650, 2669
AsuC2I	CCSGG	1 cut(s)	1751
AsuHPI	GGTGA	4 cut(s)	274, 999, 1564, 2309
AsuII	TTCGAA	1 cut(s)	1642
AsuNHI	GCTAGC	2 cut(s)	961, 965
AvaI	CYCGRG	1 cut(s)	2817
AvaII	GGWCC	3 cut(s)	1753, 1862, 2669
BaeGI	GKGCMC	2 cut(s)	573, 1138
BaeI	ACNNNNGTAYC	2 cut(s)	638, 671
BalI	TGGCCA	1 cut(s)	788
BamHI	GGATCC	1 cut(s)	1067
BanI	GGYRCC	2 cut(s)	1135, 1954
BauI	CACGAG	2 cut(s)	16, 200
BbsI	GAAGAC	5 cut(s)	476, 527, 882, 1216, 2462
Bbv12I	GWGCWC	1 cut(s)	903
BbvI	GCAGC	1 cut(s)	1709
BccI	CCATC	8 cut(s)	281, 293, 326, 666, 1558, 2227, 2658, 2752
BcgI	CGANNNNNNTGC	4 cut(s)	1530, 1564, 1622, 1656
BciT130I	CCWGG	3 cut(s)	669, 2145, 2844
BciVI	GTATCC	1 cut(s)	1353
BclI	TGATCA	1 cut(s)	2001
BcnI	CCSGG	1 cut(s)	1751
BcoDI	GTCTC	4 cut(s)	548, 553, 693, 1338
BfaI	CTAG	8 cut(s)	659, 732, 894, 962, 966, 1488, 1688, 1709
BfmI	CTRYAG	4 cut(s)	501, 1086, 1209, 1476
BfoI	RGCGCY	2 cut(s)	1958, 2334
BfrI	CTTAAG	2 cut(s)	451, 2512
BfuAI	ACCTGC	2 cut(s)	120, 2310
BfuI	GTATCC	1 cut(s)	1353
BglII	AGATCT	2 cut(s)	951, 2130
BisI	GCNGC	2 cut(s)	583, 1698
BlsI	GCNGC	2 cut(s)	584, 1699
Bme1390I	CCNGG	4 cut(s)	669, 1751, 2145, 2844
Bme18I	GGWCC	3 cut(s)	1753, 1862, 2669
BmeT110I	CYCGRG	1 cut(s)	2817
BmgBI	CACGTC	2 cut(s)	664, 2319
BmgT120I	GGNCC	7 cut(s)	938, 1603, 1753, 1840, 1862, 2650, 2669
BmiI	GGNNCC	6 cut(s)	1069, 1137, 1754, 1956, 2670, 2889
BmrFI	CCNGG	4 cut(s)	669, 1751, 2145, 2844
BmsI	GCATC	6 cut(s)	606, 1067, 1320, 1520, 1620, 2387
BmtI	GCTAGC	2 cut(s)	965, 969
BpiI	GAAGAC	5 cut(s)	476, 527, 882, 1216, 2462
BpmI	CTGGAG	1 cut(s)	2127
Bpu14I	TTCGAA	1 cut(s)	1642
BpuEI	CTTGAG	3 cut(s)	797, 895, 2418
BpuMI	CCSGG	1 cut(s)	1751
Bsa29I	ATCGAT	2 cut(s)	1738, 2150
BsaAI	YACGTR	1 cut(s)	370
BsaBI	GATNNNNATC	1 cut(s)	2218
BsaHI	GRCGYC	2 cut(s)	1370, 1955
BsaI	GGTCTC	1 cut(s)	1338
BsaJI	CCNNGG	5 cut(s)	361, 577, 1328, 2392, 2842
BsaXI	ACNNNNNCTCC	4 cut(s)	172, 202, 550, 580
Bsc4I	CCNNNNNNNGG	1 cut(s)	1212
Bse118I	RCCGGY	2 cut(s)	2647, 2671
Bse3DI	GCAATG	2 cut(s)	106, 2348
Bse8I	GATNNNNATC	1 cut(s)	2218
BseBI	CCWGG	3 cut(s)	669, 2145, 2844
BseCI	ATCGAT	2 cut(s)	1738, 2150
BseDI	CCNNGG	5 cut(s)	361, 577, 1328, 2392, 2842
BseGI	GGATG	9 cut(s)	347, 677, 1311, 1909, 2219, 2402, 2669, 2763, 2767
BseJI	GATNNNNATC	1 cut(s)	2218
BseLI	CCNNNNNNNGG	1 cut(s)	1212
BseMI	GCAATG	2 cut(s)	106, 2348
BseMII	CTCAG	5 cut(s)	789, 933, 969, 1212, 1771
BseSI	GKGCMC	2 cut(s)	573, 1138
BseXI	GCAGC	1 cut(s)	1709
BsgI	GTGCAG	1 cut(s)	1428
Bsh1236I	CGCG	1 cut(s)	2797
Bsh1285I	CGRYCG	1 cut(s)	2154
BshNI	GGYRCC	2 cut(s)	1135, 1954
BshVI	ATCGAT	2 cut(s)	1738, 2150
BsiEI	CGRYCG	1 cut(s)	2154
BsiHKAI	GWGCWC	1 cut(s)	903
BsiHKCI	CYCGRG	1 cut(s)	2817
BsiSI	CCGG	3 cut(s)	1750, 2648, 2672
BslFI	GGGAC	4 cut(s)	476, 1766, 1965, 2682
BslI	CCNNNNNNNGG	1 cut(s)	1212
BsmAI	GTCTC	4 cut(s)	548, 553, 693, 1338
BsmFI	GGGAC	4 cut(s)	476, 1766, 1965, 2682
BsmI	GAATGC	2 cut(s)	1541, 1770
Bso31I	GGTCTC	1 cut(s)	1338
BsoBI	CYCGRG	1 cut(s)	2817
Bsp119I	TTCGAA	1 cut(s)	1642
Bsp1286I	GDGCHC	3 cut(s)	573, 903, 1138
Bsp19I	CCATGG	2 cut(s)	577, 1328
BspACI	CCGC	4 cut(s)	583, 1065, 1274, 2558
BspCNI	CTCAG	5 cut(s)	788, 932, 968, 1211, 1770
BspDI	ATCGAT	2 cut(s)	1738, 2150
BspFNI	CGCG	1 cut(s)	2797
BspHI	TCATGA	3 cut(s)	339, 1998, 2776
BspLI	GGNNCC	6 cut(s)	1069, 1137, 1754, 1956, 2670, 2889
BspMI	ACCTGC	2 cut(s)	120, 2310
BspOI	GCTAGC	2 cut(s)	965, 969
BspPI	GGATC	7 cut(s)	53, 1062, 1075, 1583, 1778, 2155, 2221
BspT104I	TTCGAA	1 cut(s)	1642
BspT107I	GGYRCC	2 cut(s)	1135, 1954
BspTI	CTTAAG	2 cut(s)	451, 2512
BspTNI	GGTCTC	1 cut(s)	1338
BsrDI	GCAATG	2 cut(s)	106, 2348
BsrFI	RCCGGY	2 cut(s)	2647, 2671
BssAI	RCCGGY	2 cut(s)	2647, 2671
BssECI	CCNNGG	5 cut(s)	361, 577, 1328, 2392, 2842
BssNI	GRCGYC	2 cut(s)	1370, 1955
BssSI	CACGAG	2 cut(s)	16, 200
BssT1I	CCWWGG	3 cut(s)	577, 1328, 2392
Bst2BI	CACGAG	2 cut(s)	16, 200
Bst2UI	CCWGG	3 cut(s)	669, 2145, 2844
Bst4CI	ACNGT	4 cut(s)	295, 1361, 1396, 1661
Bst6I	CTCTTC	2 cut(s)	2073, 2290
BstACI	GRCGYC	2 cut(s)	1370, 1955
BstAFI	CTTAAG	2 cut(s)	451, 2512
BstBAI	YACGTR	1 cut(s)	370
BstBI	TTCGAA	1 cut(s)	1642
BstDEI	CTNAG	9 cut(s)	595, 775, 919, 929, 944, 955, 1198, 1615, 1757
BstDSI	CCRYGG	2 cut(s)	577, 1328
BstEII	GGTNACC	2 cut(s)	2297, 2730
BstF5I	GGATG	9 cut(s)	347, 677, 1311, 1909, 2219, 2402, 2669, 2763, 2767
BstFNI	CGCG	1 cut(s)	2797
BstH2I	RGCGCY	2 cut(s)	1958, 2334
BstHHI	GCGC	4 cut(s)	132, 1431, 1957, 2333
BstMAI	GTCTC	4 cut(s)	548, 553, 693, 1338
BstMCI	CGRYCG	1 cut(s)	2154
BstMWI	GCNNNNNNNGC	8 cut(s)	27, 127, 1952, 1963, 1972, 2055, 2202, 2257
BstNI	CCWGG	3 cut(s)	669, 2145, 2844
BstNSI	RCATGY	6 cut(s)	55, 762, 915, 2251, 2857, 2900
BstPI	GGTNACC	2 cut(s)	2297, 2730
BstSCI	CCNGG	4 cut(s)	667, 1749, 2143, 2842
BstSFI	CTRYAG	4 cut(s)	501, 1086, 1209, 1476
BstSLI	GKGCMC	2 cut(s)	573, 1138
BstSNI	TACGTA	1 cut(s)	370
BstUI	CGCG	1 cut(s)	2797
BstV1I	GCAGC	1 cut(s)	1709
BstV2I	GAAGAC	5 cut(s)	476, 527, 882, 1216, 2462
BstX2I	RGATCY	5 cut(s)	951, 1067, 1575, 2130, 2213
BstXI	CCANNNNNNTGG	1 cut(s)	1872
BstYI	RGATCY	5 cut(s)	951, 1067, 1575, 2130, 2213
Bsu15I	ATCGAT	2 cut(s)	1738, 2150
BsuI	GTATCC	1 cut(s)	1353
BsuTUI	ATCGAT	2 cut(s)	1738, 2150
BtgI	CCRYGG	2 cut(s)	577, 1328
BtrI	CACGTC	2 cut(s)	664, 2319
BtsCI	GGATG	9 cut(s)	347, 677, 1311, 1909, 2219, 2402, 2669, 2763, 2767
BtsI	GCAGTG	1 cut(s)	2786
BtsIMutI	CAGTG	3 cut(s)	927, 1765, 2786
BveI	ACCTGC	2 cut(s)	120, 2310
CciI	TCATGA	3 cut(s)	339, 1998, 2776
CfoI	GCGC	4 cut(s)	132, 1431, 1957, 2333
Cfr10I	RCCGGY	2 cut(s)	2647, 2671
Cfr13I	GGNCC	7 cut(s)	938, 1603, 1753, 1840, 1862, 2650, 2669
ClaI	ATCGAT	2 cut(s)	1738, 2150
Csp6I	GTAC	4 cut(s)	367, 400, 457, 1256
CspCI	CAANNNNNGTGG	2 cut(s)	2665, 2700
CviQI	GTAC	4 cut(s)	367, 400, 457, 1256
DdeI	CTNAG	9 cut(s)	595, 775, 919, 929, 944, 955, 1198, 1615, 1757
DinI	GGCGCC	1 cut(s)	1956
DraI	TTTAAA	3 cut(s)	246, 435, 2580
EaeI	YGGCCR	5 cut(s)	580, 786, 1385, 2645, 2673
Eam1104I	CTCTTC	2 cut(s)	2073, 2290
EarI	CTCTTC	2 cut(s)	2073, 2290
EciI	GGCGGA	3 cut(s)	1080, 1289, 2573
Eco105I	TACGTA	1 cut(s)	370
Eco130I	CCWWGG	3 cut(s)	577, 1328, 2392
Eco31I	GGTCTC	1 cut(s)	1338
Eco32I	GATATC	1 cut(s)	2910
Eco47I	GGWCC	3 cut(s)	1753, 1862, 2669
Eco47III	AGCGCT	1 cut(s)	2332
Eco88I	CYCGRG	1 cut(s)	2817
Eco91I	GGTNACC	2 cut(s)	2297, 2730
EcoO109I	RGGNCCY	1 cut(s)	1753
EcoO65I	GGTNACC	2 cut(s)	2297, 2730
EcoRII	CCWGG	3 cut(s)	667, 2143, 2842
EcoRV	GATATC	1 cut(s)	2910
EcoT14I	CCWWGG	3 cut(s)	577, 1328, 2392
EcoT22I	ATGCAT	2 cut(s)	1060, 1513
EgeI	GGCGCC	1 cut(s)	1956
EheI	GGCGCC	1 cut(s)	1956
ErhI	CCWWGG	3 cut(s)	577, 1328, 2392
FalI	AAGNNNNNCTT	8 cut(s)	509, 541, 857, 889, 1211, 1243, 1813, 1845
FaqI	GGGAC	4 cut(s)	476, 1766, 1965, 2682
FbaI	TGATCA	1 cut(s)	2001
FblI	GTMKAC	1 cut(s)	1472
Fnu4HI	GCNGC	2 cut(s)	583, 1698
FokI	GGATG	9 cut(s)	334, 684, 1298, 1896, 2206, 2409, 2676, 2770, 2774
FseI	GGCCGGCC	1 cut(s)	2651
Fsp4HI	GCNGC	2 cut(s)	583, 1698
FspBI	CTAG	8 cut(s)	659, 732, 894, 962, 966, 1488, 1688, 1709
FspI	TGCGCA	1 cut(s)	131
GlaI	GCGC	4 cut(s)	131, 1430, 1956, 2332
GluI	GCNGC	2 cut(s)	583, 1698
GsuI	CTGGAG	1 cut(s)	2127
HaeII	RGCGCY	2 cut(s)	1958, 2334
HapII	CCGG	3 cut(s)	1750, 2648, 2672
HhaI	GCGC	4 cut(s)	132, 1431, 1957, 2333
Hin1I	GRCGYC	2 cut(s)	1370, 1955
Hin6I	GCGC	4 cut(s)	130, 1429, 1955, 2331
HinP1I	GCGC	4 cut(s)	130, 1429, 1955, 2331
HincII	GTYRAC	2 cut(s)	1473, 1657
HindII	GTYRAC	2 cut(s)	1473, 1657
HindIII	AAGCTT	2 cut(s)	717, 856
HpaI	GTTAAC	1 cut(s)	1657
HpaII	CCGG	3 cut(s)	1750, 2648, 2672
HphI	GGTGA	4 cut(s)	274, 999, 1564, 2309
Hpy166II	GTNNAC	4 cut(s)	235, 402, 1473, 1657
Hpy188I	TCNGA	5 cut(s)	958, 1282, 2013, 2028, 2809
Hpy8I	GTNNAC	4 cut(s)	235, 402, 1473, 1657
Hpy99I	CGWCG	2 cut(s)	1840, 1973
HpyAV	CCTTC	9 cut(s)	535, 716, 1014, 1545, 1694, 1853, 1923, 2060, 2287
HpyCH4III	ACNGT	4 cut(s)	295, 1361, 1396, 1661
HpyCH4IV	ACGT	5 cut(s)	369, 663, 1370, 2109, 2318
HpyF10VI	GCNNNNNNNGC	8 cut(s)	27, 127, 1952, 1963, 1972, 2055, 2202, 2257
HpyF3I	CTNAG	9 cut(s)	595, 775, 919, 929, 944, 955, 1198, 1615, 1757
HpySE526I	ACGT	5 cut(s)	369, 663, 1370, 2109, 2318
Hsp92I	GRCGYC	2 cut(s)	1370, 1955
HspAI	GCGC	4 cut(s)	130, 1429, 1955, 2331
KasI	GGCGCC	1 cut(s)	1954
KroI	GCCGGC	1 cut(s)	2647
KroNI	GCCGGC	1 cut(s)	2649
Ksp22I	TGATCA	1 cut(s)	2001
KspAI	GTTAAC	1 cut(s)	1657
LmnI	GCTCC	4 cut(s)	9, 90, 2083, 2893
Lsp1109I	GCAGC	1 cut(s)	1709
LweI	GCATC	6 cut(s)	606, 1067, 1320, 1520, 1620, 2387
MaeI	CTAG	8 cut(s)	659, 732, 894, 962, 966, 1488, 1688, 1709
MaeII	ACGT	5 cut(s)	369, 663, 1370, 2109, 2318
MaeIII	GTNAC	8 cut(s)	91, 505, 1745, 2297, 2314, 2341, 2504, 2730
MfeI	CAATTG	1 cut(s)	1634
MflI	RGATCY	5 cut(s)	951, 1067, 1575, 2130, 2213
MhlI	GDGCHC	3 cut(s)	573, 903, 1138
MlsI	TGGCCA	1 cut(s)	788
MluI	ACGCGT	1 cut(s)	2795
MluNI	TGGCCA	1 cut(s)	788
Mly113I	GGCGCC	1 cut(s)	1955
MlyI	GAGTC	6 cut(s)	729, 802, 1927, 2082, 2417, 2782
MmeI	TCCRAC	3 cut(s)	958, 1472, 1811
Mox20I	TGGCCA	1 cut(s)	788
Mph1103I	ATGCAT	2 cut(s)	1060, 1513
MroNI	GCCGGC	1 cut(s)	2647
MroXI	GAANNNNTTC	2 cut(s)	1799, 2067
MscI	TGGCCA	1 cut(s)	788
MslI	CAYNNNNRTG	3 cut(s)	576, 1516, 2078
Msp20I	TGGCCA	1 cut(s)	788
MspA1I	CMGCKG	1 cut(s)	1700
MspCI	CTTAAG	2 cut(s)	451, 2512
MspI	CCGG	3 cut(s)	1750, 2648, 2672
MspR9I	CCNGG	4 cut(s)	669, 1751, 2145, 2844
MunI	CAATTG	1 cut(s)	1634
Mva1269I	GAATGC	2 cut(s)	1541, 1770
MvaI	CCWGG	3 cut(s)	669, 2145, 2844
MvnI	CGCG	1 cut(s)	2797
MwoI	GCNNNNNNNGC	8 cut(s)	27, 127, 1952, 1963, 1972, 2055, 2202, 2257
NaeI	GCCGGC	1 cut(s)	2649
NarI	GGCGCC	1 cut(s)	1955
NciI	CCSGG	1 cut(s)	1751
NcoI	CCATGG	2 cut(s)	577, 1328
NgoMIV	GCCGGC	1 cut(s)	2647
NheI	GCTAGC	2 cut(s)	961, 965
NlaIV	GGNNCC	6 cut(s)	1069, 1137, 1754, 1956, 2670, 2889
NmuCI	GTSAC	6 cut(s)	91, 505, 1745, 2297, 2314, 2341
NsbI	TGCGCA	1 cut(s)	131
NsiI	ATGCAT	2 cut(s)	1060, 1513
NspI	RCATGY	6 cut(s)	55, 762, 915, 2251, 2857, 2900
NspV	TTCGAA	1 cut(s)	1642
PaeI	GCATGC	2 cut(s)	55, 2251
PaeR7I	CTCGAG	1 cut(s)	2817
PagI	TCATGA	3 cut(s)	339, 1998, 2776
PciI	ACATGT	3 cut(s)	911, 2853, 2896
PctI	GAATGC	2 cut(s)	1541, 1770
PdiI	GCCGGC	1 cut(s)	2649
PdmI	GAANNNNTTC	2 cut(s)	1799, 2067
PfeI	GAWTC	5 cut(s)	824, 1235, 1277, 1639, 2847
PflFI	GACNNNGTC	1 cut(s)	991
PfoI	TCCNGGA	1 cut(s)	2143
PkrI	GCNGC	2 cut(s)	584, 1699
Ple19I	CGATCG	1 cut(s)	2154
PleI	GAGTC	6 cut(s)	729, 802, 1927, 2082, 2417, 2781
PluTI	GGCGCC	1 cut(s)	1958
PpsI	GAGTC	6 cut(s)	729, 802, 1927, 2082, 2417, 2781
Ppu21I	YACGTR	1 cut(s)	370
PpuMI	RGGWCCY	1 cut(s)	1753
PscI	ACATGT	3 cut(s)	911, 2853, 2896
Psp5II	RGGWCCY	1 cut(s)	1753
Psp6I	CCWGG	3 cut(s)	667, 2143, 2842
PspEI	GGTNACC	2 cut(s)	2297, 2730
PspGI	CCWGG	3 cut(s)	667, 2143, 2842
PspN4I	GGNNCC	6 cut(s)	1069, 1137, 1754, 1956, 2670, 2889
PspPI	GGNCC	7 cut(s)	938, 1603, 1753, 1840, 1862, 2650, 2669
PspPPI	RGGWCCY	1 cut(s)	1753
PspXI	VCTCGAGB	1 cut(s)	2817
PsuI	RGATCY	5 cut(s)	951, 1067, 1575, 2130, 2213
PsyI	GACNNNGTC	1 cut(s)	991
PvuI	CGATCG	1 cut(s)	2154
PvuII	CAGCTG	1 cut(s)	1700
RigI	GGCCGGCC	1 cut(s)	2651
RsaI	GTAC	4 cut(s)	368, 401, 458, 1257
RsaNI	GTAC	4 cut(s)	367, 400, 457, 1256
RseI	CAYNNNNRTG	3 cut(s)	576, 1516, 2078
SalI	GTCGAC	1 cut(s)	1471
SatI	GCNGC	2 cut(s)	583, 1698
Sau96I	GGNCC	7 cut(s)	938, 1603, 1753, 1840, 1862, 2650, 2669
SchI	GAGTC	6 cut(s)	729, 802, 1927, 2082, 2417, 2782
ScrFI	CCNGG	4 cut(s)	669, 1751, 2145, 2844
SduI	GDGCHC	3 cut(s)	573, 903, 1138
SfaNI	GCATC	6 cut(s)	606, 1067, 1320, 1520, 1620, 2387
SfcI	CTRYAG	4 cut(s)	501, 1086, 1209, 1476
SfoI	GGCGCC	1 cut(s)	1956
Sfr274I	CTCGAG	1 cut(s)	2817
SfuI	TTCGAA	1 cut(s)	1642
SinI	GGWCC	3 cut(s)	1753, 1862, 2669
SlaI	CTCGAG	1 cut(s)	2817
SmiMI	CAYNNNNRTG	3 cut(s)	576, 1516, 2078
SmlI	CTYRAG	6 cut(s)	451, 812, 874, 2433, 2512, 2817
SmoI	CTYRAG	6 cut(s)	451, 812, 874, 2433, 2512, 2817
SnaBI	TACGTA	1 cut(s)	370
SphI	GCATGC	2 cut(s)	55, 2251
SsiI	CCGC	4 cut(s)	583, 1065, 1274, 2558
SspDI	GGCGCC	1 cut(s)	1954
SspMI	CTAG	8 cut(s)	659, 732, 894, 962, 966, 1488, 1688, 1709
StyD4I	CCNGG	4 cut(s)	667, 1749, 2143, 2842
StyI	CCWWGG	3 cut(s)	577, 1328, 2392
TaaI	ACNGT	4 cut(s)	295, 1361, 1396, 1661
TaiI	ACGT	5 cut(s)	372, 666, 1373, 2112, 2321
TaqII	GACCGA	2 cut(s)	1850, 2329
TatI	WGTACW	2 cut(s)	399, 1255
TauI	GCSGC	1 cut(s)	585
TfiI	GAWTC	5 cut(s)	824, 1235, 1277, 1639, 2847
TscAI	CASTG	3 cut(s)	927, 1765, 2793
TseFI	GTSAC	6 cut(s)	91, 505, 1745, 2297, 2314, 2341
TseI	GCWGC	1 cut(s)	1697
Tsp45I	GTSAC	6 cut(s)	91, 505, 1745, 2297, 2314, 2341
TspDTI	ATGAA	8 cut(s)	336, 1227, 1987, 2325, 2337, 2561, 2692, 2778
TspGWI	ACGGA	5 cut(s)	1053, 1314, 1398, 2278, 2456
TspRI	CASTG	3 cut(s)	927, 1765, 2793
Tth111I	GACNNNGTC	1 cut(s)	991
Vha464I	CTTAAG	2 cut(s)	451, 2512
VpaK11BI	GGWCC	3 cut(s)	1753, 1862, 2669
XapI	RAATTY	5 cut(s)	406, 443, 2461, 2575, 2584
XbaI	TCTAGA	2 cut(s)	658, 731
XceI	RCATGY	6 cut(s)	55, 762, 915, 2251, 2857, 2900
XhoI	CTCGAG	1 cut(s)	2817
XmiI	GTMKAC	1 cut(s)	1472
XmnI	GAANNNNTTC	2 cut(s)	1799, 2067
XspI	CTAG	8 cut(s)	659, 732, 894, 962, 966, 1488, 1688, 1709
ZraI	GACGTC	1 cut(s)	1371
Zsp2I	ATGCAT	2 cut(s)	1060, 1513

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.