NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G20360 |
| fragaria_vesca | FvH4_2g20370 FvH4_2g20370 FvH4_2g20370 |
| malus_domestica | MD05G1187700.v1.1 MD10G1175400.v1.1 |
| prunus_persica | Prupe.8G214700_v2.0.a1 Prupe.8G214700_v2.0.a1 Prupe.8G214700_v2.0.a1 |
| pyrus_communis | pycom05g17250 pycom10g15110 pycom10g15120 |
| rosa_chinensis | RchiOBHm_Chr6g0286481 |
| rosa_laevigata | RLG00000012568 |
| rosa_multiflora | Rmu_sc0004816.1_g000013 Rmu_sc0005089.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00182300 |
| rosa_rugosa | Rorug06G0180100 |
| rosa_samantha | Rh6AG292300 Rh6CG296600 Rh6DG288400 |
| rosa_wichuraiana | Rw6G025210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 161 |
| Acc36I | ACCTGC | 1 cut(s) | 655 |
| Acc65I | GGTACC | 2 cut(s) | 662, 809 |
| AccB1I | GGYRCC | 4 cut(s) | 27, 150, 662, 809 |
| AccII | CGCG | 2 cut(s) | 11, 21 |
| AciI | CCGC | 3 cut(s) | 9, 722, 907 |
| AclWI | GGATC | 5 cut(s) | 130, 223, 678, 745, 1015 |
| AcoI | YGGCCR | 1 cut(s) | 1193 |
| AcsI | RAATTY | 1 cut(s) | 746 |
| AcuI | CTGAAG | 2 cut(s) | 318, 1121 |
| AcyI | GRCGYC | 1 cut(s) | 28 |
| AdeI | CACNNNGTG | 1 cut(s) | 157 |
| AfaI | GTAC | 4 cut(s) | 119, 348, 664, 811 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 119, 290, 672, 728, 1154 |
| AgsI | TTSAA | 7 cut(s) | 54, 381, 536, 682, 799, 1009, 1072 |
| AluBI | AGCT | 9 cut(s) | 104, 456, 593, 608, 794, 877, 950, 1034, 1099 |
| AluI | AGCT | 9 cut(s) | 104, 456, 593, 608, 794, 877, 950, 1034, 1099 |
| Alw21I | GWGCWC | 1 cut(s) | 952 |
| Alw26I | GTCTC | 2 cut(s) | 434, 637 |
| AlwI | GGATC | 5 cut(s) | 130, 223, 678, 745, 1015 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 37 |
| AoxI | GGCC | 5 cut(s) | 6, 842, 902, 1145, 1193 |
| ApaI | GGGCCC | 1 cut(s) | 1149 |
| ApeKI | GCWGC | 4 cut(s) | 203, 593, 596, 791 |
| ApoI | RAATTY | 1 cut(s) | 746 |
| Asp718I | GGTACC | 2 cut(s) | 662, 809 |
| AspLEI | GCGC | 4 cut(s) | 21, 30, 162, 484 |
| AspS9I | GGNCC | 4 cut(s) | 842, 903, 1145, 1146 |
| AxyI | CCTNAGG | 1 cut(s) | 627 |
| BaeGI | GKGCMC | 4 cut(s) | 153, 170, 1092, 1149 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1032, 1065 |
| BalI | TGGCCA | 1 cut(s) | 1195 |
| BanI | GGYRCC | 4 cut(s) | 27, 150, 662, 809 |
| BanII | GRGCYC | 2 cut(s) | 952, 1149 |
| BauI | CACGAG | 2 cut(s) | 954, 1046 |
| BbsI | GAAGAC | 1 cut(s) | 306 |
| Bbv12I | GWGCWC | 1 cut(s) | 952 |
| BbvI | GCAGC | 4 cut(s) | 190, 580, 583, 803 |
| BccI | CCATC | 3 cut(s) | 649, 728, 800 |
| BcoDI | GTCTC | 2 cut(s) | 434, 637 |
| BfmI | CTRYAG | 3 cut(s) | 204, 597, 1035 |
| BfoI | RGCGCY | 1 cut(s) | 31 |
| BfuAI | ACCTGC | 1 cut(s) | 655 |
| BglII | AGATCT | 1 cut(s) | 849 |
| BisI | GCNGC | 5 cut(s) | 9, 204, 594, 597, 792 |
| BlsI | GCNGC | 5 cut(s) | 10, 205, 595, 598, 793 |
| BmgT120I | GGNCC | 4 cut(s) | 842, 903, 1145, 1146 |
| BmiI | GGNNCC | 8 cut(s) | 29, 152, 227, 664, 811, 905, 921, 1147 |
| BmsI | GCATC | 3 cut(s) | 563, 871, 1177 |
| BpiI | GAAGAC | 1 cut(s) | 306 |
| BpmI | CTGGAG | 2 cut(s) | 556, 1167 |
| BpuEI | CTTGAG | 2 cut(s) | 50, 302 |
| BsaAI | YACGTR | 1 cut(s) | 913 |
| BsaHI | GRCGYC | 1 cut(s) | 28 |
| BsaI | GGTCTC | 1 cut(s) | 637 |
| BsaJI | CCNNGG | 5 cut(s) | 138, 229, 289, 477, 666 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 119, 290, 672, 728, 1154 |
| Bse1I | ACTGG | 2 cut(s) | 31, 495 |
| Bse21I | CCTNAGG | 1 cut(s) | 627 |
| Bse3DI | GCAATG | 1 cut(s) | 948 |
| BseDI | CCNNGG | 5 cut(s) | 138, 229, 289, 477, 666 |
| BseGI | GGATG | 1 cut(s) | 739 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 119, 290, 672, 728, 1154 |
| BseMI | GCAATG | 1 cut(s) | 948 |
| BseMII | CTCAG | 2 cut(s) | 618, 837 |
| BseNI | ACTGG | 2 cut(s) | 31, 495 |
| BseSI | GKGCMC | 4 cut(s) | 153, 170, 1092, 1149 |
| BseXI | GCAGC | 4 cut(s) | 190, 580, 583, 803 |
| BseYI | CCCAGC | 2 cut(s) | 687, 776 |
| Bsh1236I | CGCG | 2 cut(s) | 11, 21 |
| BshFI | GGCC | 5 cut(s) | 8, 844, 904, 1147, 1195 |
| BshNI | GGYRCC | 4 cut(s) | 27, 150, 662, 809 |
| BsiHKAI | GWGCWC | 1 cut(s) | 952 |
| BslFI | GGGAC | 1 cut(s) | 351 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 119, 290, 672, 728, 1154 |
| BsmAI | GTCTC | 2 cut(s) | 434, 637 |
| BsmBI | CGTCTC | 1 cut(s) | 434 |
| BsmFI | GGGAC | 1 cut(s) | 351 |
| BsnI | GGCC | 5 cut(s) | 8, 844, 904, 1147, 1195 |
| Bso31I | GGTCTC | 1 cut(s) | 637 |
| Bsp120I | GGGCCC | 1 cut(s) | 1145 |
| Bsp1286I | GDGCHC | 5 cut(s) | 153, 170, 952, 1092, 1149 |
| Bsp19I | CCATGG | 1 cut(s) | 477 |
| BspACI | CCGC | 3 cut(s) | 9, 722, 907 |
| BspANI | GGCC | 5 cut(s) | 8, 844, 904, 1147, 1195 |
| BspCNI | CTCAG | 2 cut(s) | 619, 838 |
| BspFNI | CGCG | 2 cut(s) | 11, 21 |
| BspHI | TCATGA | 1 cut(s) | 522 |
| BspLI | GGNNCC | 8 cut(s) | 29, 152, 227, 664, 811, 905, 921, 1147 |
| BspMAI | CTGCAG | 2 cut(s) | 208, 601 |
| BspMI | ACCTGC | 1 cut(s) | 655 |
| BspPI | GGATC | 5 cut(s) | 130, 223, 678, 745, 1015 |
| BspT107I | GGYRCC | 4 cut(s) | 27, 150, 662, 809 |
| BspTNI | GGTCTC | 1 cut(s) | 637 |
| BsrDI | GCAATG | 1 cut(s) | 948 |
| BsrI | ACTGG | 2 cut(s) | 31, 495 |
| BssECI | CCNNGG | 5 cut(s) | 138, 229, 289, 477, 666 |
| BssNI | GRCGYC | 1 cut(s) | 28 |
| BssSI | CACGAG | 2 cut(s) | 954, 1046 |
| BssT1I | CCWWGG | 3 cut(s) | 138, 229, 477 |
| Bst2BI | CACGAG | 2 cut(s) | 954, 1046 |
| Bst4CI | ACNGT | 2 cut(s) | 1157, 1165 |
| BstACI | GRCGYC | 1 cut(s) | 28 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 157, 698 |
| BstBAI | YACGTR | 1 cut(s) | 913 |
| BstC8I | GCNNGC | 1 cut(s) | 6 |
| BstDEI | CTNAG | 3 cut(s) | 581, 627, 846 |
| BstDSI | CCRYGG | 2 cut(s) | 289, 477 |
| BstEII | GGTNACC | 1 cut(s) | 1106 |
| BstF5I | GGATG | 1 cut(s) | 739 |
| BstFNI | CGCG | 2 cut(s) | 11, 21 |
| BstH2I | RGCGCY | 1 cut(s) | 31 |
| BstHHI | GCGC | 4 cut(s) | 21, 30, 162, 484 |
| BstMAI | GTCTC | 2 cut(s) | 434, 637 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 25, 27, 157, 605, 698, 788, 947, 1096 |
| BstPI | GGTNACC | 1 cut(s) | 1106 |
| BstSFI | CTRYAG | 3 cut(s) | 204, 597, 1035 |
| BstSLI | GKGCMC | 4 cut(s) | 153, 170, 1092, 1149 |
| BstUI | CGCG | 2 cut(s) | 11, 21 |
| BstV1I | GCAGC | 4 cut(s) | 190, 580, 583, 803 |
| BstV2I | GAAGAC | 1 cut(s) | 306 |
| BstX2I | RGATCY | 5 cut(s) | 122, 215, 737, 849, 1020 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 145, 1191 |
| BstYI | RGATCY | 5 cut(s) | 122, 215, 737, 849, 1020 |
| Bsu36I | CCTNAGG | 1 cut(s) | 627 |
| BsuRI | GGCC | 5 cut(s) | 8, 844, 904, 1147, 1195 |
| BtgI | CCRYGG | 2 cut(s) | 289, 477 |
| BtgZI | GCGATG | 1 cut(s) | 293 |
| BtsCI | GGATG | 1 cut(s) | 739 |
| BtsIMutI | CAGTG | 1 cut(s) | 1174 |
| BveI | ACCTGC | 1 cut(s) | 655 |
| Cac8I | GCNNGC | 1 cut(s) | 6 |
| CaiI | CAGNNNCTG | 1 cut(s) | 37 |
| CciI | TCATGA | 1 cut(s) | 522 |
| CfoI | GCGC | 4 cut(s) | 21, 30, 162, 484 |
| Cfr13I | GGNCC | 4 cut(s) | 842, 903, 1145, 1146 |
| Csp6I | GTAC | 4 cut(s) | 118, 347, 663, 810 |
| CviAII | CATG | 5 cut(s) | 394, 478, 512, 523, 817 |
| CviQI | GTAC | 4 cut(s) | 118, 347, 663, 810 |
| DdeI | CTNAG | 3 cut(s) | 581, 627, 846 |
| DinI | GGCGCC | 1 cut(s) | 29 |
| DraIII | CACNNNGTG | 1 cut(s) | 157 |
| EaeI | YGGCCR | 1 cut(s) | 1193 |
| Ecl136II | GAGCTC | 1 cut(s) | 950 |
| Eco130I | CCWWGG | 3 cut(s) | 138, 229, 477 |
| Eco24I | GRGCYC | 2 cut(s) | 952, 1149 |
| Eco31I | GGTCTC | 1 cut(s) | 637 |
| Eco53kI | GAGCTC | 1 cut(s) | 950 |
| Eco57I | CTGAAG | 2 cut(s) | 318, 1121 |
| Eco81I | CCTNAGG | 1 cut(s) | 627 |
| Eco91I | GGTNACC | 1 cut(s) | 1106 |
| EcoICRI | GAGCTC | 1 cut(s) | 950 |
| EcoO65I | GGTNACC | 1 cut(s) | 1106 |
| EcoT14I | CCWWGG | 3 cut(s) | 138, 229, 477 |
| EcoT22I | ATGCAT | 1 cut(s) | 864 |
| EcoT38I | GRGCYC | 2 cut(s) | 952, 1149 |
| EgeI | GGCGCC | 1 cut(s) | 29 |
| EheI | GGCGCC | 1 cut(s) | 29 |
| ErhI | CCWWGG | 3 cut(s) | 138, 229, 477 |
| Esp3I | CGTCTC | 1 cut(s) | 434 |
| FaeI | CATG | 5 cut(s) | 397, 481, 515, 526, 820 |
| FaqI | GGGAC | 1 cut(s) | 351 |
| FatI | CATG | 5 cut(s) | 393, 477, 511, 522, 816 |
| FauI | CCCGC | 1 cut(s) | 914 |
| Fnu4HI | GCNGC | 5 cut(s) | 9, 204, 594, 597, 792 |
| FokI | GGATG | 1 cut(s) | 746 |
| FriOI | GRGCYC | 2 cut(s) | 952, 1149 |
| Fsp4HI | GCNGC | 5 cut(s) | 9, 204, 594, 597, 792 |
| FspI | TGCGCA | 1 cut(s) | 161 |
| GlaI | GCGC | 4 cut(s) | 20, 29, 161, 483 |
| GluI | GCNGC | 5 cut(s) | 9, 204, 594, 597, 792 |
| GsaI | CCCAGC | 2 cut(s) | 691, 780 |
| GsuI | CTGGAG | 2 cut(s) | 556, 1167 |
| HaeII | RGCGCY | 1 cut(s) | 31 |
| HaeIII | GGCC | 5 cut(s) | 8, 844, 904, 1147, 1195 |
| HhaI | GCGC | 4 cut(s) | 21, 30, 162, 484 |
| Hin1I | GRCGYC | 1 cut(s) | 28 |
| Hin1II | CATG | 5 cut(s) | 397, 481, 515, 526, 820 |
| Hin6I | GCGC | 4 cut(s) | 19, 28, 160, 482 |
| HinP1I | GCGC | 4 cut(s) | 19, 28, 160, 482 |
| HinfI | GANTC | 5 cut(s) | 302, 377, 469, 528, 682 |
| Hpy188I | TCNGA | 6 cut(s) | 39, 88, 298, 675, 1020, 1054 |
| Hpy188III | TCNNGA | 4 cut(s) | 523, 573, 998, 1184 |
| Hpy99I | CGWCG | 2 cut(s) | 16, 64 |
| HpyAV | CCTTC | 2 cut(s) | 910, 1096 |
| HpyCH4III | ACNGT | 2 cut(s) | 1157, 1165 |
| HpyCH4IV | ACGT | 1 cut(s) | 912 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 206, 247, 599, 862, 935 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 25, 27, 157, 605, 698, 788, 947, 1096 |
| HpyF3I | CTNAG | 3 cut(s) | 581, 627, 846 |
| HpySE526I | ACGT | 1 cut(s) | 912 |
| Hsp92I | GRCGYC | 1 cut(s) | 28 |
| Hsp92II | CATG | 5 cut(s) | 397, 481, 515, 526, 820 |
| HspAI | GCGC | 4 cut(s) | 19, 28, 160, 482 |
| KasI | GGCGCC | 1 cut(s) | 27 |
| KpnI | GGTACC | 2 cut(s) | 666, 813 |
| LmnI | GCTCC | 3 cut(s) | 101, 947, 955 |
| Lsp1109I | GCAGC | 4 cut(s) | 190, 580, 583, 803 |
| LweI | GCATC | 3 cut(s) | 563, 871, 1177 |
| MaeII | ACGT | 1 cut(s) | 912 |
| MaeIII | GTNAC | 1 cut(s) | 1106 |
| MboII | GAAGA | 7 cut(s) | 42, 189, 311, 386, 549, 710, 997 |
| MfeI | CAATTG | 3 cut(s) | 783, 866, 930 |
| MflI | RGATCY | 5 cut(s) | 122, 215, 737, 849, 1020 |
| MhlI | GDGCHC | 5 cut(s) | 153, 170, 952, 1092, 1149 |
| MlsI | TGGCCA | 1 cut(s) | 1195 |
| MluCI | AATT | 7 cut(s) | 381, 620, 746, 783, 866, 930, 1130 |
| MluNI | TGGCCA | 1 cut(s) | 1195 |
| Mly113I | GGCGCC | 1 cut(s) | 28 |
| MlyI | GAGTC | 1 cut(s) | 296 |
| MmeI | TCCRAC | 1 cut(s) | 775 |
| Mox20I | TGGCCA | 1 cut(s) | 1195 |
| Mph1103I | ATGCAT | 1 cut(s) | 864 |
| MscI | TGGCCA | 1 cut(s) | 1195 |
| MseI | TTAA | 4 cut(s) | 323, 384, 614, 969 |
| MslI | CAYNNNNRTG | 1 cut(s) | 96 |
| Msp20I | TGGCCA | 1 cut(s) | 1195 |
| MunI | CAATTG | 3 cut(s) | 783, 866, 930 |
| MvnI | CGCG | 2 cut(s) | 11, 21 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 25, 27, 157, 605, 698, 788, 947, 1096 |
| NarI | GGCGCC | 1 cut(s) | 28 |
| NcoI | CCATGG | 1 cut(s) | 477 |
| NlaIII | CATG | 5 cut(s) | 397, 481, 515, 526, 820 |
| NlaIV | GGNNCC | 8 cut(s) | 29, 152, 227, 664, 811, 905, 921, 1147 |
| NsbI | TGCGCA | 1 cut(s) | 161 |
| NsiI | ATGCAT | 1 cut(s) | 864 |
| PagI | TCATGA | 1 cut(s) | 522 |
| PfeI | GAWTC | 4 cut(s) | 377, 469, 528, 682 |
| PkrI | GCNGC | 5 cut(s) | 10, 205, 595, 598, 793 |
| PleI | GAGTC | 1 cut(s) | 296 |
| PluTI | GGCGCC | 1 cut(s) | 31 |
| PpsI | GAGTC | 1 cut(s) | 296 |
| Ppu21I | YACGTR | 1 cut(s) | 913 |
| Psp124BI | GAGCTC | 1 cut(s) | 952 |
| PspEI | GGTNACC | 1 cut(s) | 1106 |
| PspFI | CCCAGC | 2 cut(s) | 687, 776 |
| PspN4I | GGNNCC | 8 cut(s) | 29, 152, 227, 664, 811, 905, 921, 1147 |
| PspOMI | GGGCCC | 1 cut(s) | 1145 |
| PspPI | GGNCC | 4 cut(s) | 842, 903, 1145, 1146 |
| PstI | CTGCAG | 2 cut(s) | 208, 601 |
| PstNI | CAGNNNCTG | 1 cut(s) | 37 |
| PsuI | RGATCY | 5 cut(s) | 122, 215, 737, 849, 1020 |
| RsaI | GTAC | 4 cut(s) | 119, 348, 664, 811 |
| RsaNI | GTAC | 4 cut(s) | 118, 347, 663, 810 |
| RseI | CAYNNNNRTG | 1 cut(s) | 96 |
| SacI | GAGCTC | 1 cut(s) | 952 |
| SaqAI | TTAA | 4 cut(s) | 323, 384, 614, 969 |
| SatI | GCNGC | 5 cut(s) | 9, 204, 594, 597, 792 |
| Sau96I | GGNCC | 4 cut(s) | 842, 903, 1145, 1146 |
| SchI | GAGTC | 1 cut(s) | 296 |
| SduI | GDGCHC | 5 cut(s) | 153, 170, 952, 1092, 1149 |
| SfaNI | GCATC | 3 cut(s) | 563, 871, 1177 |
| SfcI | CTRYAG | 3 cut(s) | 204, 597, 1035 |
| SfoI | GGCGCC | 1 cut(s) | 29 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 96 |
| SmlI | CTYRAG | 2 cut(s) | 65, 317 |
| SmoI | CTYRAG | 2 cut(s) | 65, 317 |
| Sse9I | AATT | 7 cut(s) | 381, 620, 746, 783, 866, 930, 1130 |
| SsiI | CCGC | 3 cut(s) | 9, 722, 907 |
| SspDI | GGCGCC | 1 cut(s) | 27 |
| SspI | AATATT | 1 cut(s) | 963 |
| SstI | GAGCTC | 1 cut(s) | 952 |
| StyI | CCWWGG | 3 cut(s) | 138, 229, 477 |
| TaaI | ACNGT | 2 cut(s) | 1157, 1165 |
| TaiI | ACGT | 1 cut(s) | 915 |
| TaqI | TCGA | 1 cut(s) | 14 |
| TasI | AATT | 7 cut(s) | 381, 620, 746, 783, 866, 930, 1130 |
| TauI | GCSGC | 1 cut(s) | 11 |
| TfiI | GAWTC | 4 cut(s) | 377, 469, 528, 682 |
| Tru1I | TTAA | 4 cut(s) | 323, 384, 614, 969 |
| Tru9I | TTAA | 4 cut(s) | 323, 384, 614, 969 |
| TscAI | CASTG | 1 cut(s) | 1174 |
| TseI | GCWGC | 4 cut(s) | 203, 593, 596, 791 |
| TspDTI | ATGAA | 4 cut(s) | 368, 387, 520, 846 |
| TspGWI | ACGGA | 3 cut(s) | 135, 278, 884 |
| TspRI | CASTG | 1 cut(s) | 1174 |
| XapI | RAATTY | 1 cut(s) | 746 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 142 |
| Zsp2I | ATGCAT | 1 cut(s) | 864 |