NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G20360 |
| fragaria_vesca | FvH4_2g20370 FvH4_2g20370 FvH4_2g20370 |
| malus_domestica | MD05G1187700.v1.1 MD10G1175400.v1.1 |
| prunus_persica | Prupe.8G214700_v2.0.a1 Prupe.8G214700_v2.0.a1 Prupe.8G214700_v2.0.a1 |
| pyrus_communis | pycom05g17250 pycom10g15110 pycom10g15120 |
| rosa_chinensis | RchiOBHm_Chr6g0286481 |
| rosa_laevigata | RLG00000012568 |
| rosa_multiflora | Rmu_sc0004816.1_g000013 Rmu_sc0005089.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00182300 |
| rosa_rugosa | Rorug06G0180100 |
| rosa_samantha | Rh6AG292300 Rh6CG296600 Rh6DG288400 |
| rosa_wichuraiana | Rw6G025210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 46 |
| Acc16I | TGCGCA | 1 cut(s) | 161 |
| Acc36I | ACCTGC | 1 cut(s) | 655 |
| AccB1I | GGYRCC | 3 cut(s) | 27, 150, 809 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 728 |
| AclWI | GGATC | 3 cut(s) | 130, 223, 745 |
| AcoI | YGGCCR | 2 cut(s) | 480, 1193 |
| AcsI | RAATTY | 2 cut(s) | 675, 1057 |
| AcuI | CTGAAG | 2 cut(s) | 338, 1121 |
| AdeI | CACNNNGTG | 2 cut(s) | 157, 913 |
| AfaI | GTAC | 4 cut(s) | 119, 246, 348, 664 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 119, 290, 728, 1036, 1154 |
| AgsI | TTSAA | 6 cut(s) | 54, 381, 536, 682, 799, 1009 |
| AluBI | AGCT | 7 cut(s) | 104, 404, 456, 593, 877, 1034, 1099 |
| AluI | AGCT | 7 cut(s) | 104, 404, 456, 593, 877, 1034, 1099 |
| Alw26I | GTCTC | 5 cut(s) | 434, 637, 881, 1054, 1185 |
| AlwI | GGATC | 3 cut(s) | 130, 223, 745 |
| Ama87I | CYCGRG | 1 cut(s) | 954 |
| AoxI | GGCC | 8 cut(s) | 6, 480, 630, 690, 842, 902, 1144, 1193 |
| ApeKI | GCWGC | 5 cut(s) | 203, 593, 596, 791, 947 |
| ApoI | RAATTY | 2 cut(s) | 675, 1057 |
| AspLEI | GCGC | 2 cut(s) | 162, 952 |
| AspS9I | GGNCC | 4 cut(s) | 670, 690, 842, 1145 |
| AsuHPI | GGTGA | 1 cut(s) | 558 |
| AsuII | TTCGAA | 1 cut(s) | 14 |
| AvaI | CYCGRG | 1 cut(s) | 954 |
| AvaII | GGWCC | 1 cut(s) | 670 |
| AxyI | CCTNAGG | 1 cut(s) | 846 |
| BaeGI | GKGCMC | 4 cut(s) | 30, 153, 170, 1092 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 502, 535, 1032, 1065 |
| BalI | TGGCCA | 1 cut(s) | 1195 |
| BanI | GGYRCC | 3 cut(s) | 27, 150, 809 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 597, 629 |
| BbsI | GAAGAC | 1 cut(s) | 42 |
| BbvI | GCAGC | 5 cut(s) | 190, 580, 583, 803, 959 |
| BccI | CCATC | 4 cut(s) | 315, 319, 728, 800 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 543, 577 |
| BciVI | GTATCC | 1 cut(s) | 1033 |
| BcoDI | GTCTC | 5 cut(s) | 434, 637, 881, 1054, 1185 |
| BfmI | CTRYAG | 4 cut(s) | 204, 219, 597, 1161 |
| BfoI | RGCGCY | 1 cut(s) | 953 |
| BfuAI | ACCTGC | 1 cut(s) | 655 |
| BfuI | GTATCC | 1 cut(s) | 1033 |
| BisI | GCNGC | 5 cut(s) | 204, 594, 597, 792, 948 |
| BlsI | GCNGC | 5 cut(s) | 205, 595, 598, 793, 949 |
| Bme18I | GGWCC | 1 cut(s) | 670 |
| BmeT110I | CYCGRG | 1 cut(s) | 954 |
| BmgT120I | GGNCC | 4 cut(s) | 670, 690, 842, 1145 |
| BmiI | GGNNCC | 5 cut(s) | 29, 152, 227, 811, 921 |
| BmsI | GCATC | 3 cut(s) | 563, 871, 1177 |
| BpiI | GAAGAC | 1 cut(s) | 42 |
| BpmI | CTGGAG | 2 cut(s) | 556, 1167 |
| Bpu10I | CCTNAGC | 1 cut(s) | 547 |
| Bpu14I | TTCGAA | 1 cut(s) | 14 |
| BpuEI | CTTGAG | 1 cut(s) | 50 |
| BsaAI | YACGTR | 3 cut(s) | 617, 896, 913 |
| BsaBI | GATNNNNATC | 1 cut(s) | 306 |
| BsaI | GGTCTC | 1 cut(s) | 637 |
| BsaJI | CCNNGG | 4 cut(s) | 229, 289, 477, 504 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 119, 290, 728, 1036, 1154 |
| Bse1I | ACTGG | 1 cut(s) | 495 |
| Bse21I | CCTNAGG | 1 cut(s) | 846 |
| Bse8I | GATNNNNATC | 1 cut(s) | 306 |
| BseDI | CCNNGG | 4 cut(s) | 229, 289, 477, 504 |
| BseGI | GGATG | 2 cut(s) | 739, 808 |
| BseJI | GATNNNNATC | 1 cut(s) | 306 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 119, 290, 728, 1036, 1154 |
| BseMII | CTCAG | 3 cut(s) | 288, 837, 1065 |
| BseNI | ACTGG | 1 cut(s) | 495 |
| BseSI | GKGCMC | 4 cut(s) | 30, 153, 170, 1092 |
| BseXI | GCAGC | 5 cut(s) | 190, 580, 583, 803, 959 |
| BseYI | CCCAGC | 2 cut(s) | 687, 776 |
| BshFI | GGCC | 8 cut(s) | 8, 482, 632, 692, 844, 904, 1146, 1195 |
| BshNI | GGYRCC | 3 cut(s) | 27, 150, 809 |
| BsiHKCI | CYCGRG | 1 cut(s) | 954 |
| BslFI | GGGAC | 1 cut(s) | 351 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 119, 290, 728, 1036, 1154 |
| BsmAI | GTCTC | 5 cut(s) | 434, 637, 881, 1054, 1185 |
| BsmBI | CGTCTC | 1 cut(s) | 1054 |
| BsmFI | GGGAC | 1 cut(s) | 351 |
| BsnI | GGCC | 8 cut(s) | 8, 482, 632, 692, 844, 904, 1146, 1195 |
| Bso31I | GGTCTC | 1 cut(s) | 637 |
| BsoBI | CYCGRG | 1 cut(s) | 954 |
| Bsp119I | TTCGAA | 1 cut(s) | 14 |
| Bsp1286I | GDGCHC | 4 cut(s) | 30, 153, 170, 1092 |
| Bsp1407I | TGTACA | 1 cut(s) | 244 |
| Bsp143I | GATC | 8 cut(s) | 88, 106, 122, 179, 215, 737, 1015, 1075 |
| Bsp19I | CCATGG | 1 cut(s) | 477 |
| BspANI | GGCC | 8 cut(s) | 8, 482, 632, 692, 844, 904, 1146, 1195 |
| BspCNI | CTCAG | 3 cut(s) | 289, 838, 1064 |
| BspHI | TCATGA | 1 cut(s) | 522 |
| BspLI | GGNNCC | 5 cut(s) | 29, 152, 227, 811, 921 |
| BspMAI | CTGCAG | 2 cut(s) | 208, 601 |
| BspMI | ACCTGC | 1 cut(s) | 655 |
| BspPI | GGATC | 3 cut(s) | 130, 223, 745 |
| BspT104I | TTCGAA | 1 cut(s) | 14 |
| BspT107I | GGYRCC | 3 cut(s) | 27, 150, 809 |
| BspTNI | GGTCTC | 1 cut(s) | 637 |
| BsrGI | TGTACA | 1 cut(s) | 244 |
| BsrI | ACTGG | 1 cut(s) | 495 |
| BssECI | CCNNGG | 4 cut(s) | 229, 289, 477, 504 |
| BssMI | GATC | 8 cut(s) | 88, 106, 122, 179, 215, 737, 1015, 1075 |
| BssT1I | CCWWGG | 3 cut(s) | 229, 477, 504 |
| Bst4CI | ACNGT | 5 cut(s) | 515, 637, 859, 1045, 1165 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 157 |
| BstAUI | TGTACA | 1 cut(s) | 244 |
| BstBAI | YACGTR | 3 cut(s) | 617, 896, 913 |
| BstBI | TTCGAA | 1 cut(s) | 14 |
| BstC8I | GCNNGC | 1 cut(s) | 6 |
| BstDEI | CTNAG | 6 cut(s) | 138, 297, 547, 581, 846, 1051 |
| BstDSI | CCRYGG | 2 cut(s) | 289, 477 |
| BstEII | GGTNACC | 1 cut(s) | 1106 |
| BstF5I | GGATG | 2 cut(s) | 739, 808 |
| BstH2I | RGCGCY | 1 cut(s) | 953 |
| BstHHI | GCGC | 2 cut(s) | 162, 952 |
| BstKTI | GATC | 8 cut(s) | 91, 109, 125, 182, 218, 740, 1018, 1078 |
| BstMAI | GTCTC | 5 cut(s) | 434, 637, 881, 1054, 1185 |
| BstMBI | GATC | 8 cut(s) | 88, 106, 122, 179, 215, 737, 1015, 1075 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 25, 157, 395, 593, 605, 698, 788, 947, 1096 |
| BstPI | GGTNACC | 1 cut(s) | 1106 |
| BstSFI | CTRYAG | 4 cut(s) | 204, 219, 597, 1161 |
| BstSLI | GKGCMC | 4 cut(s) | 30, 153, 170, 1092 |
| BstV1I | GCAGC | 5 cut(s) | 190, 580, 583, 803, 959 |
| BstV2I | GAAGAC | 1 cut(s) | 42 |
| BstX2I | RGATCY | 3 cut(s) | 122, 215, 737 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1191 |
| BstYI | RGATCY | 3 cut(s) | 122, 215, 737 |
| Bsu36I | CCTNAGG | 1 cut(s) | 846 |
| BsuI | GTATCC | 1 cut(s) | 1033 |
| BsuRI | GGCC | 8 cut(s) | 8, 482, 632, 692, 844, 904, 1146, 1195 |
| BtgI | CCRYGG | 2 cut(s) | 289, 477 |
| BtsCI | GGATG | 2 cut(s) | 739, 808 |
| BtsIMutI | CAGTG | 4 cut(s) | 633, 864, 1078, 1174 |
| BveI | ACCTGC | 1 cut(s) | 655 |
| Cac8I | GCNNGC | 1 cut(s) | 6 |
| CciI | TCATGA | 1 cut(s) | 522 |
| CfoI | GCGC | 2 cut(s) | 162, 952 |
| Cfr13I | GGNCC | 4 cut(s) | 670, 690, 842, 1145 |
| Csp6I | GTAC | 4 cut(s) | 118, 245, 347, 663 |
| CviAII | CATG | 5 cut(s) | 394, 478, 523, 817, 1197 |
| CviQI | GTAC | 4 cut(s) | 118, 245, 347, 663 |
| DdeI | CTNAG | 6 cut(s) | 138, 297, 547, 581, 846, 1051 |
| DpnI | GATC | 8 cut(s) | 90, 108, 124, 181, 217, 739, 1017, 1077 |
| DpnII | GATC | 8 cut(s) | 88, 106, 122, 179, 215, 737, 1015, 1075 |
| DraIII | CACNNNGTG | 2 cut(s) | 157, 913 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 46 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 46 |
| EaeI | YGGCCR | 2 cut(s) | 480, 1193 |
| Eco130I | CCWWGG | 3 cut(s) | 229, 477, 504 |
| Eco31I | GGTCTC | 1 cut(s) | 637 |
| Eco47I | GGWCC | 1 cut(s) | 670 |
| Eco57I | CTGAAG | 2 cut(s) | 338, 1121 |
| Eco81I | CCTNAGG | 1 cut(s) | 846 |
| Eco88I | CYCGRG | 1 cut(s) | 954 |
| Eco91I | GGTNACC | 1 cut(s) | 1106 |
| EcoO65I | GGTNACC | 1 cut(s) | 1106 |
| EcoT14I | CCWWGG | 3 cut(s) | 229, 477, 504 |
| ErhI | CCWWGG | 3 cut(s) | 229, 477, 504 |
| Esp3I | CGTCTC | 1 cut(s) | 1054 |
| FaeI | CATG | 5 cut(s) | 397, 481, 526, 820, 1200 |
| FaqI | GGGAC | 1 cut(s) | 351 |
| FatI | CATG | 5 cut(s) | 393, 477, 522, 816, 1196 |
| Fnu4HI | GCNGC | 5 cut(s) | 204, 594, 597, 792, 948 |
| FokI | GGATG | 2 cut(s) | 746, 815 |
| Fsp4HI | GCNGC | 5 cut(s) | 204, 594, 597, 792, 948 |
| FspI | TGCGCA | 1 cut(s) | 161 |
| GlaI | GCGC | 2 cut(s) | 161, 951 |
| GluI | GCNGC | 5 cut(s) | 204, 594, 597, 792, 948 |
| GsaI | CCCAGC | 2 cut(s) | 691, 780 |
| GsuI | CTGGAG | 2 cut(s) | 556, 1167 |
| HaeII | RGCGCY | 1 cut(s) | 953 |
| HaeIII | GGCC | 8 cut(s) | 8, 482, 632, 692, 844, 904, 1146, 1195 |
| HhaI | GCGC | 2 cut(s) | 162, 952 |
| Hin1II | CATG | 5 cut(s) | 397, 481, 526, 820, 1200 |
| Hin6I | GCGC | 2 cut(s) | 160, 950 |
| HinP1I | GCGC | 2 cut(s) | 160, 950 |
| HinfI | GANTC | 5 cut(s) | 40, 302, 377, 469, 682 |
| HphI | GGTGA | 1 cut(s) | 558 |
| Hpy188I | TCNGA | 6 cut(s) | 88, 114, 298, 318, 366, 1054 |
| Hpy188III | TCNNGA | 5 cut(s) | 523, 573, 956, 998, 1184 |
| HpyAV | CCTTC | 3 cut(s) | 793, 910, 1096 |
| HpyCH4III | ACNGT | 5 cut(s) | 515, 637, 859, 1045, 1165 |
| HpyCH4IV | ACGT | 3 cut(s) | 616, 895, 912 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 206, 599, 862, 935, 947 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 25, 157, 395, 593, 605, 698, 788, 947, 1096 |
| HpyF3I | CTNAG | 6 cut(s) | 138, 297, 547, 581, 846, 1051 |
| HpySE526I | ACGT | 3 cut(s) | 616, 895, 912 |
| Hsp92II | CATG | 5 cut(s) | 397, 481, 526, 820, 1200 |
| HspAI | GCGC | 2 cut(s) | 160, 950 |
| Kzo9I | GATC | 8 cut(s) | 88, 106, 122, 179, 215, 737, 1015, 1075 |
| LmnI | GCTCC | 1 cut(s) | 101 |
| Lsp1109I | GCAGC | 5 cut(s) | 190, 580, 583, 803, 959 |
| LweI | GCATC | 3 cut(s) | 563, 871, 1177 |
| MaeII | ACGT | 3 cut(s) | 616, 895, 912 |
| MaeIII | GTNAC | 2 cut(s) | 564, 1106 |
| MalI | GATC | 8 cut(s) | 90, 108, 124, 181, 217, 739, 1017, 1077 |
| MboI | GATC | 8 cut(s) | 88, 106, 122, 179, 215, 737, 1015, 1075 |
| MboII | GAAGA | 7 cut(s) | 42, 189, 386, 549, 710, 715, 997 |
| MfeI | CAATTG | 3 cut(s) | 866, 930, 942 |
| MflI | RGATCY | 3 cut(s) | 122, 215, 737 |
| MhlI | GDGCHC | 4 cut(s) | 30, 153, 170, 1092 |
| MlsI | TGGCCA | 1 cut(s) | 1195 |
| MluCI | AATT | 8 cut(s) | 381, 620, 675, 866, 930, 942, 1057, 1150 |
| MluNI | TGGCCA | 1 cut(s) | 1195 |
| MlyI | GAGTC | 1 cut(s) | 34 |
| MmeI | TCCRAC | 1 cut(s) | 775 |
| Mox20I | TGGCCA | 1 cut(s) | 1195 |
| MscI | TGGCCA | 1 cut(s) | 1195 |
| MseI | TTAA | 1 cut(s) | 384 |
| MslI | CAYNNNNRTG | 2 cut(s) | 96, 815 |
| Msp20I | TGGCCA | 1 cut(s) | 1195 |
| MunI | CAATTG | 3 cut(s) | 866, 930, 942 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 25, 157, 395, 593, 605, 698, 788, 947, 1096 |
| NcoI | CCATGG | 1 cut(s) | 477 |
| NdeII | GATC | 8 cut(s) | 88, 106, 122, 179, 215, 737, 1015, 1075 |
| NlaIII | CATG | 5 cut(s) | 397, 481, 526, 820, 1200 |
| NlaIV | GGNNCC | 5 cut(s) | 29, 152, 227, 811, 921 |
| NmuCI | GTSAC | 1 cut(s) | 564 |
| NsbI | TGCGCA | 1 cut(s) | 161 |
| NspV | TTCGAA | 1 cut(s) | 14 |
| PaeR7I | CTCGAG | 1 cut(s) | 954 |
| PagI | TCATGA | 1 cut(s) | 522 |
| PfeI | GAWTC | 4 cut(s) | 302, 377, 469, 682 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 728 |
| PkrI | GCNGC | 5 cut(s) | 205, 595, 598, 793, 949 |
| PleI | GAGTC | 1 cut(s) | 34 |
| PpsI | GAGTC | 1 cut(s) | 34 |
| Ppu21I | YACGTR | 3 cut(s) | 617, 896, 913 |
| PspEI | GGTNACC | 1 cut(s) | 1106 |
| PspFI | CCCAGC | 2 cut(s) | 687, 776 |
| PspN4I | GGNNCC | 5 cut(s) | 29, 152, 227, 811, 921 |
| PspPI | GGNCC | 4 cut(s) | 670, 690, 842, 1145 |
| PstI | CTGCAG | 2 cut(s) | 208, 601 |
| PsuI | RGATCY | 3 cut(s) | 122, 215, 737 |
| RsaI | GTAC | 4 cut(s) | 119, 246, 348, 664 |
| RsaNI | GTAC | 4 cut(s) | 118, 245, 347, 663 |
| RseI | CAYNNNNRTG | 2 cut(s) | 96, 815 |
| SaqAI | TTAA | 1 cut(s) | 384 |
| SatI | GCNGC | 5 cut(s) | 204, 594, 597, 792, 948 |
| Sau3AI | GATC | 8 cut(s) | 88, 106, 122, 179, 215, 737, 1015, 1075 |
| Sau96I | GGNCC | 4 cut(s) | 670, 690, 842, 1145 |
| SchI | GAGTC | 1 cut(s) | 34 |
| SduI | GDGCHC | 4 cut(s) | 30, 153, 170, 1092 |
| SfaNI | GCATC | 3 cut(s) | 563, 871, 1177 |
| SfcI | CTRYAG | 4 cut(s) | 204, 219, 597, 1161 |
| Sfr274I | CTCGAG | 1 cut(s) | 954 |
| SfuI | TTCGAA | 1 cut(s) | 14 |
| SinI | GGWCC | 1 cut(s) | 670 |
| SlaI | CTCGAG | 1 cut(s) | 954 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 96, 815 |
| SmlI | CTYRAG | 2 cut(s) | 65, 954 |
| SmoI | CTYRAG | 2 cut(s) | 65, 954 |
| Sse9I | AATT | 8 cut(s) | 381, 620, 675, 866, 930, 942, 1057, 1150 |
| SspI | AATATT | 1 cut(s) | 963 |
| StyI | CCWWGG | 3 cut(s) | 229, 477, 504 |
| TaaI | ACNGT | 5 cut(s) | 515, 637, 859, 1045, 1165 |
| TaiI | ACGT | 3 cut(s) | 619, 898, 915 |
| TaqI | TCGA | 2 cut(s) | 14, 955 |
| TaqII | GACCGA | 1 cut(s) | 687 |
| TasI | AATT | 8 cut(s) | 381, 620, 675, 866, 930, 942, 1057, 1150 |
| TatI | WGTACW | 1 cut(s) | 244 |
| TfiI | GAWTC | 4 cut(s) | 302, 377, 469, 682 |
| Tru1I | TTAA | 1 cut(s) | 384 |
| Tru9I | TTAA | 1 cut(s) | 384 |
| TscAI | CASTG | 4 cut(s) | 640, 864, 1078, 1174 |
| TseFI | GTSAC | 1 cut(s) | 564 |
| TseI | GCWGC | 5 cut(s) | 203, 593, 596, 791, 947 |
| Tsp45I | GTSAC | 1 cut(s) | 564 |
| TspDTI | ATGAA | 3 cut(s) | 368, 387, 846 |
| TspGWI | ACGGA | 4 cut(s) | 135, 278, 680, 1052 |
| TspRI | CASTG | 4 cut(s) | 640, 864, 1078, 1174 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 728 |
| VpaK11BI | GGWCC | 1 cut(s) | 670 |
| XapI | RAATTY | 2 cut(s) | 675, 1057 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 142 |
| XhoI | CTCGAG | 1 cut(s) | 954 |