NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 9
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G20360 |
| fragaria_vesca | FvH4_2g20370 FvH4_2g20370 FvH4_2g20370 |
| malus_domestica | MD05G1187700.v1.1 MD10G1175400.v1.1 |
| prunus_persica | Prupe.8G214700_v2.0.a1 Prupe.8G214700_v2.0.a1 Prupe.8G214700_v2.0.a1 |
| pyrus_communis | pycom05g17250 pycom10g15110 pycom10g15120 |
| rosa_chinensis | RchiOBHm_Chr6g0286481 |
| rosa_laevigata | RLG00000012568 |
| rosa_multiflora | Rmu_sc0004816.1_g000013 Rmu_sc0005089.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00182300 |
| rosa_rugosa | Rorug06G0180100 |
| rosa_samantha | Rh6AG292300 Rh6CG296600 Rh6DG288400 |
| rosa_wichuraiana | Rw6G025210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 763 |
| AccB1I | GGYRCC | 1 cut(s) | 258 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 836, 1262 |
| AccI | GTMKAC | 1 cut(s) | 848 |
| AccII | CGCG | 1 cut(s) | 138 |
| AciI | CCGC | 1 cut(s) | 497 |
| AclWI | GGATC | 5 cut(s) | 29, 238, 331, 786, 994 |
| AcoI | YGGCCR | 1 cut(s) | 1010 |
| AcsI | RAATTY | 2 cut(s) | 783, 1191 |
| AcuI | CTGAAG | 3 cut(s) | 116, 426, 1128 |
| AdeI | CACNNNGTG | 1 cut(s) | 1021 |
| AfaI | GTAC | 5 cut(s) | 227, 267, 354, 456, 772 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 227, 398, 836, 1262 |
| AgsI | TTSAA | 5 cut(s) | 644, 790, 810, 1117, 1180 |
| AjnI | CCWGG | 1 cut(s) | 378 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1249, 1281 |
| AluBI | AGCT | 7 cut(s) | 94, 100, 212, 512, 564, 701, 1142 |
| AluI | AGCT | 7 cut(s) | 94, 100, 212, 512, 564, 701, 1142 |
| Alw21I | GWGCWC | 1 cut(s) | 972 |
| Alw26I | GTCTC | 6 cut(s) | 73, 471, 542, 745, 1162, 1283 |
| Alw44I | GTGCAC | 1 cut(s) | 968 |
| AlwI | GGATC | 5 cut(s) | 29, 238, 331, 786, 994 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1312 |
| AoxI | GGCC | 5 cut(s) | 738, 798, 950, 1010, 1252 |
| ApaI | GGGCCC | 1 cut(s) | 802 |
| ApaLI | GTGCAC | 1 cut(s) | 968 |
| ApeKI | GCWGC | 6 cut(s) | 100, 145, 311, 701, 704, 1312 |
| ApoI | RAATTY | 2 cut(s) | 783, 1191 |
| AspLEI | GCGC | 2 cut(s) | 138, 140 |
| AspS9I | GGNCC | 4 cut(s) | 798, 799, 950, 1253 |
| AsuHPI | GGTGA | 2 cut(s) | 191, 666 |
| AxyI | CCTNAGG | 1 cut(s) | 954 |
| BaeGI | GKGCMC | 4 cut(s) | 261, 278, 802, 972 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1140, 1173 |
| BalI | TGGCCA | 1 cut(s) | 1012 |
| BanI | GGYRCC | 1 cut(s) | 258 |
| BanII | GRGCYC | 1 cut(s) | 802 |
| BauI | CACGAG | 1 cut(s) | 1062 |
| Bbv12I | GWGCWC | 1 cut(s) | 972 |
| BbvI | GCAGC | 6 cut(s) | 87, 157, 298, 688, 691, 1299 |
| BccI | CCATC | 6 cut(s) | 35, 423, 427, 685, 836, 908 |
| BciT130I | CCWGG | 1 cut(s) | 380 |
| BcoDI | GTCTC | 6 cut(s) | 73, 471, 542, 745, 1162, 1283 |
| BfaI | CTAG | 2 cut(s) | 234, 1121 |
| BfmI | CTRYAG | 2 cut(s) | 312, 705 |
| BfuAI | ACCTGC | 1 cut(s) | 763 |
| BisI | GCNGC | 6 cut(s) | 101, 146, 312, 702, 705, 1313 |
| BlpI | GCTNAGC | 1 cut(s) | 213 |
| BlsI | GCNGC | 6 cut(s) | 102, 147, 313, 703, 706, 1314 |
| Bme1390I | CCNGG | 1 cut(s) | 380 |
| BmgT120I | GGNCC | 4 cut(s) | 798, 799, 950, 1253 |
| BmiI | GGNNCC | 3 cut(s) | 260, 335, 800 |
| BmrFI | CCNGG | 1 cut(s) | 380 |
| BmrI | ACTGGG | 1 cut(s) | 339 |
| BmsI | GCATC | 2 cut(s) | 108, 671 |
| BmuI | ACTGGG | 1 cut(s) | 339 |
| Bpu10I | CCTNAGC | 2 cut(s) | 655, 1044 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 213 |
| BpuEI | CTTGAG | 2 cut(s) | 158, 410 |
| BsaAI | YACGTR | 1 cut(s) | 1021 |
| BsaBI | GATNNNNATC | 2 cut(s) | 26, 414 |
| BsaI | GGTCTC | 2 cut(s) | 73, 745 |
| BsaJI | CCNNGG | 3 cut(s) | 337, 397, 585 |
| BsaWI | WCCGGW | 1 cut(s) | 64 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 176, 206 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 227, 398, 836, 1262 |
| Bse1I | ACTGG | 1 cut(s) | 334 |
| Bse21I | CCTNAGG | 1 cut(s) | 954 |
| Bse3DI | GCAATG | 3 cut(s) | 609, 1062, 1094 |
| Bse8I | GATNNNNATC | 2 cut(s) | 26, 414 |
| BseBI | CCWGG | 1 cut(s) | 380 |
| BseDI | CCNNGG | 3 cut(s) | 337, 397, 585 |
| BseGI | GGATG | 2 cut(s) | 677, 847 |
| BseJI | GATNNNNATC | 2 cut(s) | 26, 414 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 227, 398, 836, 1262 |
| BseMI | GCAATG | 3 cut(s) | 609, 1062, 1094 |
| BseMII | CTCAG | 5 cut(s) | 5, 102, 204, 945, 1173 |
| BseNI | ACTGG | 1 cut(s) | 334 |
| BsePI | GCGCGC | 1 cut(s) | 136 |
| BseSI | GKGCMC | 4 cut(s) | 261, 278, 802, 972 |
| BseXI | GCAGC | 6 cut(s) | 87, 157, 298, 688, 691, 1299 |
| BseYI | CCCAGC | 2 cut(s) | 44, 140 |
| Bsh1236I | CGCG | 1 cut(s) | 138 |
| BshFI | GGCC | 5 cut(s) | 740, 800, 952, 1012, 1254 |
| BshNI | GGYRCC | 1 cut(s) | 258 |
| BsiHKAI | GWGCWC | 1 cut(s) | 972 |
| BsiSI | CCGG | 1 cut(s) | 65 |
| BslFI | GGGAC | 3 cut(s) | 67, 204, 459 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 227, 398, 836, 1262 |
| BsmAI | GTCTC | 6 cut(s) | 73, 471, 542, 745, 1162, 1283 |
| BsmBI | CGTCTC | 1 cut(s) | 471 |
| BsmFI | GGGAC | 3 cut(s) | 67, 204, 459 |
| BsnI | GGCC | 5 cut(s) | 740, 800, 952, 1012, 1254 |
| Bso31I | GGTCTC | 2 cut(s) | 73, 745 |
| Bsp120I | GGGCCC | 1 cut(s) | 798 |
| Bsp1286I | GDGCHC | 4 cut(s) | 261, 278, 802, 972 |
| Bsp1407I | TGTACA | 1 cut(s) | 352 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 213 |
| Bsp19I | CCATGG | 1 cut(s) | 585 |
| BspACI | CCGC | 1 cut(s) | 497 |
| BspANI | GGCC | 5 cut(s) | 740, 800, 952, 1012, 1254 |
| BspCNI | CTCAG | 5 cut(s) | 6, 101, 205, 946, 1172 |
| BspFNI | CGCG | 1 cut(s) | 138 |
| BspHI | TCATGA | 1 cut(s) | 630 |
| BspLI | GGNNCC | 3 cut(s) | 260, 335, 800 |
| BspMAI | CTGCAG | 2 cut(s) | 316, 709 |
| BspMI | ACCTGC | 1 cut(s) | 763 |
| BspPI | GGATC | 5 cut(s) | 29, 238, 331, 786, 994 |
| BspT107I | GGYRCC | 1 cut(s) | 258 |
| BspTNI | GGTCTC | 2 cut(s) | 73, 745 |
| BsrDI | GCAATG | 3 cut(s) | 609, 1062, 1094 |
| BsrGI | TGTACA | 1 cut(s) | 352 |
| BsrI | ACTGG | 1 cut(s) | 334 |
| BssECI | CCNNGG | 3 cut(s) | 337, 397, 585 |
| BssHII | GCGCGC | 1 cut(s) | 136 |
| BssSI | CACGAG | 1 cut(s) | 1062 |
| BssT1I | CCWWGG | 2 cut(s) | 337, 585 |
| Bst2BI | CACGAG | 1 cut(s) | 1062 |
| Bst2UI | CCWGG | 1 cut(s) | 380 |
| Bst4CI | ACNGT | 2 cut(s) | 967, 1153 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 713 |
| BstAUI | TGTACA | 1 cut(s) | 352 |
| BstBAI | YACGTR | 1 cut(s) | 1021 |
| BstC8I | GCNNGC | 2 cut(s) | 123, 138 |
| BstDEI | CTNAG | 8 cut(s) | 14, 88, 213, 246, 655, 954, 1044, 1159 |
| BstDSI | CCRYGG | 2 cut(s) | 397, 585 |
| BstF5I | GGATG | 2 cut(s) | 677, 847 |
| BstFNI | CGCG | 1 cut(s) | 138 |
| BstHHI | GCGC | 2 cut(s) | 138, 140 |
| BstMAI | GTCTC | 6 cut(s) | 73, 471, 542, 745, 1162, 1283 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 10, 100, 142, 503, 701, 713, 881 |
| BstNI | CCWGG | 1 cut(s) | 380 |
| BstSCI | CCNGG | 1 cut(s) | 378 |
| BstSFI | CTRYAG | 2 cut(s) | 312, 705 |
| BstSLI | GKGCMC | 4 cut(s) | 261, 278, 802, 972 |
| BstUI | CGCG | 1 cut(s) | 138 |
| BstV1I | GCAGC | 6 cut(s) | 87, 157, 298, 688, 691, 1299 |
| BstX2I | RGATCY | 2 cut(s) | 230, 323 |
| BstYI | RGATCY | 2 cut(s) | 230, 323 |
| Bsu36I | CCTNAGG | 1 cut(s) | 954 |
| BsuRI | GGCC | 5 cut(s) | 740, 800, 952, 1012, 1254 |
| BtgI | CCRYGG | 2 cut(s) | 397, 585 |
| BtsCI | GGATG | 2 cut(s) | 677, 847 |
| BtsI | GCAGTG | 1 cut(s) | 38 |
| BtsIMutI | CAGTG | 2 cut(s) | 38, 972 |
| BveI | ACCTGC | 1 cut(s) | 763 |
| Cac8I | GCNNGC | 2 cut(s) | 123, 138 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1312 |
| CciI | TCATGA | 1 cut(s) | 630 |
| CfoI | GCGC | 2 cut(s) | 138, 140 |
| Cfr13I | GGNCC | 4 cut(s) | 798, 799, 950, 1253 |
| CseI | GACGC | 1 cut(s) | 206 |
| Csp6I | GTAC | 5 cut(s) | 226, 266, 353, 455, 771 |
| CviAII | CATG | 5 cut(s) | 586, 620, 631, 803, 997 |
| CviQI | GTAC | 5 cut(s) | 226, 266, 353, 455, 771 |
| DdeI | CTNAG | 8 cut(s) | 14, 88, 213, 246, 655, 954, 1044, 1159 |
| DraIII | CACNNNGTG | 1 cut(s) | 1021 |
| EaeI | YGGCCR | 1 cut(s) | 1010 |
| Eco130I | CCWWGG | 2 cut(s) | 337, 585 |
| Eco24I | GRGCYC | 1 cut(s) | 802 |
| Eco31I | GGTCTC | 2 cut(s) | 73, 745 |
| Eco32I | GATATC | 3 cut(s) | 152, 347, 686 |
| Eco57I | CTGAAG | 3 cut(s) | 116, 426, 1128 |
| Eco81I | CCTNAGG | 1 cut(s) | 954 |
| EcoRI | GAATTC | 1 cut(s) | 1191 |
| EcoRII | CCWGG | 1 cut(s) | 378 |
| EcoRV | GATATC | 3 cut(s) | 152, 347, 686 |
| EcoT14I | CCWWGG | 2 cut(s) | 337, 585 |
| EcoT38I | GRGCYC | 1 cut(s) | 802 |
| ErhI | CCWWGG | 2 cut(s) | 337, 585 |
| Esp3I | CGTCTC | 1 cut(s) | 471 |
| FaeI | CATG | 5 cut(s) | 589, 623, 634, 806, 1000 |
| FaqI | GGGAC | 3 cut(s) | 67, 204, 459 |
| FatI | CATG | 5 cut(s) | 585, 619, 630, 802, 996 |
| FblI | GTMKAC | 1 cut(s) | 848 |
| Fnu4HI | GCNGC | 6 cut(s) | 101, 146, 312, 702, 705, 1313 |
| FokI | GGATG | 2 cut(s) | 664, 854 |
| FriOI | GRGCYC | 1 cut(s) | 802 |
| Fsp4HI | GCNGC | 6 cut(s) | 101, 146, 312, 702, 705, 1313 |
| FspBI | CTAG | 2 cut(s) | 234, 1121 |
| GlaI | GCGC | 2 cut(s) | 137, 139 |
| GluI | GCNGC | 6 cut(s) | 101, 146, 312, 702, 705, 1313 |
| GsaI | CCCAGC | 2 cut(s) | 48, 144 |
| HaeIII | GGCC | 5 cut(s) | 740, 800, 952, 1012, 1254 |
| HapII | CCGG | 1 cut(s) | 65 |
| HgaI | GACGC | 1 cut(s) | 206 |
| HhaI | GCGC | 2 cut(s) | 138, 140 |
| Hin1II | CATG | 5 cut(s) | 589, 623, 634, 806, 1000 |
| Hin6I | GCGC | 2 cut(s) | 136, 138 |
| HinP1I | GCGC | 2 cut(s) | 136, 138 |
| HindIII | AAGCTT | 1 cut(s) | 1140 |
| HinfI | GANTC | 7 cut(s) | 55, 157, 410, 577, 790, 1027, 1295 |
| HpaII | CCGG | 1 cut(s) | 65 |
| HphI | GGTGA | 2 cut(s) | 191, 666 |
| Hpy166II | GTNNAC | 4 cut(s) | 36, 728, 849, 970 |
| Hpy188I | TCNGA | 9 cut(s) | 91, 156, 196, 323, 406, 1004, 1147, 1162, 1308 |
| Hpy188III | TCNNGA | 3 cut(s) | 631, 681, 1106 |
| Hpy8I | GTNNAC | 4 cut(s) | 36, 728, 849, 970 |
| Hpy99I | CGWCG | 1 cut(s) | 172 |
| HpyAV | CCTTC | 2 cut(s) | 12, 1326 |
| HpyCH4III | ACNGT | 2 cut(s) | 967, 1153 |
| HpyCH4IV | ACGT | 1 cut(s) | 1020 |
| HpyCH4V | TGCA | 9 cut(s) | 103, 121, 314, 707, 890, 907, 970, 1055, 1277 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 10, 100, 142, 503, 701, 713, 881 |
| HpyF3I | CTNAG | 8 cut(s) | 14, 88, 213, 246, 655, 954, 1044, 1159 |
| HpySE526I | ACGT | 1 cut(s) | 1020 |
| Hsp92II | CATG | 5 cut(s) | 589, 623, 634, 806, 1000 |
| HspAI | GCGC | 2 cut(s) | 136, 138 |
| LmnI | GCTCC | 2 cut(s) | 67, 209 |
| Lsp1109I | GCAGC | 6 cut(s) | 87, 157, 298, 688, 691, 1299 |
| LweI | GCATC | 2 cut(s) | 108, 671 |
| MaeI | CTAG | 2 cut(s) | 234, 1121 |
| MaeII | ACGT | 1 cut(s) | 1020 |
| MboII | GAAGA | 7 cut(s) | 297, 419, 818, 1036, 1105, 1187, 1311 |
| MfeI | CAATTG | 4 cut(s) | 891, 974, 1038, 1050 |
| MflI | RGATCY | 2 cut(s) | 230, 323 |
| MhlI | GDGCHC | 4 cut(s) | 261, 278, 802, 972 |
| MlsI | TGGCCA | 1 cut(s) | 1012 |
| MluCI | AATT | 8 cut(s) | 489, 744, 783, 891, 974, 1038, 1050, 1191 |
| MluNI | TGGCCA | 1 cut(s) | 1012 |
| MmeI | TCCRAC | 1 cut(s) | 883 |
| Mox20I | TGGCCA | 1 cut(s) | 1012 |
| MscI | TGGCCA | 1 cut(s) | 1012 |
| MseI | TTAA | 3 cut(s) | 492, 722, 1077 |
| MslI | CAYNNNNRTG | 3 cut(s) | 204, 746, 923 |
| Msp20I | TGGCCA | 1 cut(s) | 1012 |
| MspI | CCGG | 1 cut(s) | 65 |
| MspR9I | CCNGG | 1 cut(s) | 380 |
| MunI | CAATTG | 4 cut(s) | 891, 974, 1038, 1050 |
| MvaI | CCWGG | 1 cut(s) | 380 |
| MvnI | CGCG | 1 cut(s) | 138 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 10, 100, 142, 503, 701, 713, 881 |
| NcoI | CCATGG | 1 cut(s) | 585 |
| NlaIII | CATG | 5 cut(s) | 589, 623, 634, 806, 1000 |
| NlaIV | GGNNCC | 3 cut(s) | 260, 335, 800 |
| PagI | TCATGA | 1 cut(s) | 630 |
| PauI | GCGCGC | 1 cut(s) | 136 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 122 |
| PfeI | GAWTC | 7 cut(s) | 55, 157, 410, 577, 790, 1027, 1295 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 836, 1262 |
| PkrI | GCNGC | 6 cut(s) | 102, 147, 313, 703, 706, 1314 |
| Ppu21I | YACGTR | 1 cut(s) | 1021 |
| Psp6I | CCWGG | 1 cut(s) | 378 |
| PspFI | CCCAGC | 2 cut(s) | 44, 140 |
| PspGI | CCWGG | 1 cut(s) | 378 |
| PspN4I | GGNNCC | 3 cut(s) | 260, 335, 800 |
| PspOMI | GGGCCC | 1 cut(s) | 798 |
| PspPI | GGNCC | 4 cut(s) | 798, 799, 950, 1253 |
| PstI | CTGCAG | 2 cut(s) | 316, 709 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1312 |
| PsuI | RGATCY | 2 cut(s) | 230, 323 |
| PteI | GCGCGC | 1 cut(s) | 136 |
| RsaI | GTAC | 5 cut(s) | 227, 267, 354, 456, 772 |
| RsaNI | GTAC | 5 cut(s) | 226, 266, 353, 455, 771 |
| RseI | CAYNNNNRTG | 3 cut(s) | 204, 746, 923 |
| SaqAI | TTAA | 3 cut(s) | 492, 722, 1077 |
| SatI | GCNGC | 6 cut(s) | 101, 146, 312, 702, 705, 1313 |
| Sau96I | GGNCC | 4 cut(s) | 798, 799, 950, 1253 |
| ScrFI | CCNGG | 1 cut(s) | 380 |
| SduI | GDGCHC | 4 cut(s) | 261, 278, 802, 972 |
| SfaNI | GCATC | 2 cut(s) | 108, 671 |
| SfcI | CTRYAG | 2 cut(s) | 312, 705 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 204, 746, 923 |
| SmlI | CTYRAG | 2 cut(s) | 173, 425 |
| SmoI | CTYRAG | 2 cut(s) | 173, 425 |
| Sse9I | AATT | 8 cut(s) | 489, 744, 783, 891, 974, 1038, 1050, 1191 |
| SsiI | CCGC | 1 cut(s) | 497 |
| SspMI | CTAG | 2 cut(s) | 234, 1121 |
| StyD4I | CCNGG | 1 cut(s) | 378 |
| StyI | CCWWGG | 2 cut(s) | 337, 585 |
| TaaI | ACNGT | 2 cut(s) | 967, 1153 |
| TaiI | ACGT | 1 cut(s) | 1023 |
| TaqI | TCGA | 2 cut(s) | 343, 781 |
| TasI | AATT | 8 cut(s) | 489, 744, 783, 891, 974, 1038, 1050, 1191 |
| TatI | WGTACW | 1 cut(s) | 352 |
| TfiI | GAWTC | 7 cut(s) | 55, 157, 410, 577, 790, 1027, 1295 |
| Tru1I | TTAA | 3 cut(s) | 492, 722, 1077 |
| Tru9I | TTAA | 3 cut(s) | 492, 722, 1077 |
| TscAI | CASTG | 2 cut(s) | 45, 972 |
| TseI | GCWGC | 6 cut(s) | 100, 145, 311, 701, 704, 1312 |
| TspDTI | ATGAA | 2 cut(s) | 476, 954 |
| TspGWI | ACGGA | 6 cut(s) | 65, 69, 243, 381, 386, 1077 |
| TspRI | CASTG | 2 cut(s) | 45, 972 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 836, 1262 |
| VneI | GTGCAC | 1 cut(s) | 968 |
| XapI | RAATTY | 2 cut(s) | 783, 1191 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 250 |
| XmiI | GTMKAC | 1 cut(s) | 848 |
| XspI | CTAG | 2 cut(s) | 234, 1121 |