MD10G1296400.v1.1

U2 snRNP auxiliary factor large subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0008127
Physical Location & Seq
Forward (+)
38418048 .. 38423453
5406 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1296400.v1.1.491

Sequence Viewer

Length: 1569 bp
ATGTCAGATTACGAAGGCGTCAGCAAGCACAATTCTCGTGGATCAGAACGTGAGAGCTCGTGGAGAGATCGAGAGCGAGACCGAGGTCAAGATAGAGAAAAAGATGGTGACCGTTATACACGGCAGTATAAGGATAGAAGTGGAAGATTTGACAGAGGGAGGAACTCGTACGATGGCTATCGCCGCGGTAGAAACCAAGATTTCGACAGGCATCGTGATTATGATCAAGATAGAGAAAGGAGGCATAGACATAGATCACGATCACGTTCTCGTTCTCACTCAAGGGACAGATCTCCTTCTCATTCCCGTTCAAAGAGCAAGCGTACAAGTGGTTTTGACATGGCACCACCTGCTGGGTCAGCGCTGCCTAATGCTTCCGTTTCAGGTATTCCACAAACGATGCCTGGAGTGGTACAAAATTCATTACCTTTTGGGGCATTGCATATGGCTCTTCCATTGATGCCAGCTCAAGCCATGACTCAGCAGGCTACAAGGCATGCACGTCGGGTATACGTTGGTGGGCTTCCTCTCTTGGCTAATGAGCAGACAATTGCCACATTCTTTAGCCAAGTCATGGCTGCCATTGGAGGAAATTCTGTTGGTTCAATAACTGAACTTGCAGGTGATGCGGTTGTAAATGTCTATATTAATCATGAGAAGAAGTTTGCATTTGTGGAGATGAGAACGGTTGAAGAAGCAAGTAATGCAATGGCATTAGACGGGATTATATTTGAGGGGGTTGCTGTGAGGGTAAGAAGGCCAACAGACTACAATCCTACTTTAGCTGCAACACTTGGTCCTAGCCAACCAAGTCCTCACCTTAACTTGGCTGCCGTTGGTCTCACACAAGGTGCCGTTGGTGGAGCTGAGGGACCTGACCGTATCTTTGTGGGTGGGTTACCTTACTACTTCACTGAAGCTCAGATTAGAGAGTTGCTTCAATCCTTTGGACCTCTCCGTGGTTTTGACCTCGTGAAGGATAAAGATACAGGAAACTCCAAAGGATATGGATTCTGTGTTTATCAGGATCCAACCGTGACAGACGTTGCCTGTGGTGCTCTCAACGGTTTAAAAATGGGTGATAAAACTTTAACTGTCCGGCGTGCTACTGCCAGCAACGGGCAGTCTAAAACAGAGCAAGAAAACATCTTGGTACAGGCACAACAGCATATAGCCATGCAGAAAATGGCCATGCAGGTTGTTGACTTGAATCTTCTAGGAGCTGGAATGGCAACTATGGCGAGTGGTGAGACACCCACTAAAGTCCTATGCTTGACTGAGGCGATTACTGCTGATCAACTGGGTGACGATGAAGAGTATGTCGAAATATTAGAAGACATGAGGGATGAATGCAGCAAATTTGGAACTCTGGTGAATGTTGTTATTCCTCGTGCTGATCAAAGCGGAGAGCAGATTCCAGGTGTTGGGAAGGTGTTCTTGGAATACACCGATATTGGGGGTTGCGCCAATGCAAGGAATGTACTCGGTGGGAGAAAATTCGGAGGTAACACAGTGAATGCCGTTTACTATCCAGAAGAGAAATACCATAACAGGGACTACAGTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
RRM_1

Protein Analysis

523

Amino Acids

57.45

Weight (kDa)

8.15

Isoelectric Point (pI)

50.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 295 - 364 1.1e-16 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 358, 611
Acc36I ACCTGC 3 cut(s) 358, 611, 1186
AccB1I GGYRCC 2 cut(s) 343, 851
AccB7I CCANNNNNTGG 3 cut(s) 353, 574, 1424
AccI GTMKAC 1 cut(s) 510
AccII CGCG 1 cut(s) 186
AciI CCGC 4 cut(s) 184, 186, 629, 1404
AclWI GGATC 3 cut(s) 49, 1022, 1035
AcoI YGGCCR 1 cut(s) 1188
AcsI RAATTY 4 cut(s) 418, 592, 1358, 1496
AcuI CTGAAG 1 cut(s) 936
AcyI GRCGYC 1 cut(s) 18
AdeI CACNNNGTG 1 cut(s) 851
AfaI GTAC 5 cut(s) 170, 325, 414, 1155, 1482
AfeI AGCGCT 1 cut(s) 363
AgsI TTSAA 5 cut(s) 312, 606, 692, 941, 1210
AjiI CACGTC 1 cut(s) 503
AjnI CCWGG 2 cut(s) 403, 1417
AjuI GAANNNNNNNTTGG 2 cut(s) 1421, 1453
AluBI AGCT 6 cut(s) 57, 467, 785, 866, 920, 1223
AluI AGCT 6 cut(s) 57, 467, 785, 866, 920, 1223
Alw21I GWGCWC 2 cut(s) 59, 1060
Alw26I GTCTC 3 cut(s) 72, 845, 1244
AlwI GGATC 3 cut(s) 49, 1022, 1035
Aor51HI AGCGCT 1 cut(s) 363
AoxI GGCC 2 cut(s) 758, 1188
ApeKI GCWGC 5 cut(s) 364, 578, 785, 830, 1353
ApoI RAATTY 4 cut(s) 418, 592, 1358, 1496
ArsI GACNNNNNNTTYG 2 cut(s) 869, 901
AseI ATTAAT 1 cut(s) 648
Asp700I GAANNNNTTC 1 cut(s) 1433
AspLEI GCGC 2 cut(s) 364, 1466
AspS9I GGNCC 3 cut(s) 797, 872, 950
AsuHPI GGTGA 7 cut(s) 119, 635, 809, 1091, 1259, 1316, 1384
AvaII GGWCC 3 cut(s) 797, 872, 950
BalI TGGCCA 1 cut(s) 1190
BamHI GGATCC 1 cut(s) 1027
BanI GGYRCC 2 cut(s) 343, 851
BanII GRGCYC 1 cut(s) 59
BauI CACGAG 4 cut(s) 36, 58, 971, 1389
BbsI GAAGAC 1 cut(s) 1341
Bbv12I GWGCWC 2 cut(s) 59, 1060
BbvCI CCTCAGC 1 cut(s) 867
BbvI GCAGC 5 cut(s) 351, 565, 772, 817, 1365
BccI CCATC 2 cut(s) 98, 167
BceAI ACGGC 4 cut(s) 137, 818, 839, 1505
BcgI CGANNNNNNTGC 4 cut(s) 17, 51, 485, 519
BciT130I CCWGG 2 cut(s) 405, 1419
BclI TGATCA 3 cut(s) 223, 1294, 1396
BcoDI GTCTC 3 cut(s) 72, 845, 1244
BfaI CTAG 2 cut(s) 801, 1217
BfmI CTRYAG 1 cut(s) 1558
BfoI RGCGCY 1 cut(s) 365
BfuAI ACCTGC 3 cut(s) 358, 611, 1186
BglII AGATCT 1 cut(s) 290
BisI GCNGC 6 cut(s) 184, 365, 579, 786, 831, 1354
BlsI GCNGC 6 cut(s) 185, 366, 580, 787, 832, 1355
Bme1390I CCNGG 2 cut(s) 405, 1419
Bme18I GGWCC 3 cut(s) 797, 872, 950
BmgBI CACGTC 1 cut(s) 503
BmgT120I GGNCC 3 cut(s) 797, 872, 950
BmiI GGNNCC 4 cut(s) 345, 853, 873, 1029
BmrFI CCNGG 2 cut(s) 405, 1419
BmrI ACTGGG 1 cut(s) 1310
BmsI GCATC 4 cut(s) 220, 390, 450, 616
BmuI ACTGGG 1 cut(s) 1310
BoxI GACNNNNGTC 1 cut(s) 84
BpiI GAAGAC 1 cut(s) 1341
BpmI CTGGAG 1 cut(s) 426
Bpu10I CCTNAGC 1 cut(s) 867
BpuEI CTTGAG 2 cut(s) 265, 453
BsaBI GATNNNNATC 3 cut(s) 177, 222, 259
BsaHI GRCGYC 1 cut(s) 18
BsaI GGTCTC 2 cut(s) 72, 845
BsaJI CCNNGG 3 cut(s) 82, 184, 958
Bse1I ACTGG 1 cut(s) 1305
Bse3DI GCAATG 2 cut(s) 437, 714
Bse8I GATNNNNATC 3 cut(s) 177, 222, 259
BseBI CCWGG 2 cut(s) 405, 1419
BseDI CCNNGG 3 cut(s) 82, 184, 958
BseGI GGATG 1 cut(s) 1351
BseJI GATNNNNATC 3 cut(s) 177, 222, 259
BseMI GCAATG 2 cut(s) 437, 714
BseMII CTCAG 4 cut(s) 494, 858, 935, 1269
BseNI ACTGG 1 cut(s) 1305
BseXI GCAGC 5 cut(s) 351, 565, 772, 817, 1365
BseYI CCCAGC 1 cut(s) 353
Bsh1236I CGCG 1 cut(s) 186
BshFI GGCC 2 cut(s) 760, 1190
BshNI GGYRCC 2 cut(s) 343, 851
BsiHKAI GWGCWC 2 cut(s) 59, 1060
BsiSI CCGG 1 cut(s) 1099
BsiWI CGTACG 1 cut(s) 168
BslFI GGGAC 2 cut(s) 299, 885
BsmAI GTCTC 3 cut(s) 72, 845, 1244
BsmFI GGGAC 2 cut(s) 299, 885
BsmI GAATGC 2 cut(s) 1355, 1522
BsnI GGCC 2 cut(s) 760, 1190
Bso31I GGTCTC 2 cut(s) 72, 845
Bsp1286I GDGCHC 2 cut(s) 59, 1060
Bsp143I GATC 9 cut(s) 41, 67, 223, 254, 260, 290, 1027, 1294, 1396
BspACI CCGC 4 cut(s) 184, 186, 629, 1404
BspANI GGCC 2 cut(s) 760, 1190
BspCNI CTCAG 4 cut(s) 493, 859, 934, 1270
BspFNI CGCG 1 cut(s) 186
BspHI TCATGA 1 cut(s) 652
BspLI GGNNCC 4 cut(s) 345, 853, 873, 1029
BspMI ACCTGC 3 cut(s) 358, 611, 1186
BspPI GGATC 3 cut(s) 49, 1022, 1035
BspQI GCTCTTC 1 cut(s) 456
BspT107I GGYRCC 2 cut(s) 343, 851
BspTNI GGTCTC 2 cut(s) 72, 845
BsrDI GCAATG 2 cut(s) 437, 714
BsrI ACTGG 1 cut(s) 1305
BssECI CCNNGG 3 cut(s) 82, 184, 958
BssMI GATC 9 cut(s) 41, 67, 223, 254, 260, 290, 1027, 1294, 1396
BssNAI GTATAC 1 cut(s) 511
BssNI GRCGYC 1 cut(s) 18
BssSI CACGAG 4 cut(s) 36, 58, 971, 1389
Bst1107I GTATAC 1 cut(s) 511
Bst2BI CACGAG 4 cut(s) 36, 58, 971, 1389
Bst2UI CCWGG 2 cut(s) 405, 1419
Bst4CI ACNGT 8 cut(s) 113, 688, 881, 1036, 1067, 1096, 1513, 1562
Bst6I CTCTTC 3 cut(s) 456, 1308, 1530
BstACI GRCGYC 1 cut(s) 18
BstAPI GCANNNNNTGC 3 cut(s) 350, 626, 704
BstC8I GCNNGC 7 cut(s) 26, 320, 465, 486, 498, 1104, 1114
BstDEI CTNAG 4 cut(s) 480, 867, 921, 1278
BstDSI CCRYGG 2 cut(s) 184, 958
BstEII GGTNACC 2 cut(s) 107, 897
BstENI CCTNNNNNAGG 1 cut(s) 974
BstF5I GGATG 1 cut(s) 1351
BstFNI CGCG 1 cut(s) 186
BstH2I RGCGCY 1 cut(s) 365
BstHHI GCGC 2 cut(s) 364, 1466
BstKTI GATC 9 cut(s) 44, 70, 226, 257, 263, 293, 1030, 1297, 1399
BstMAI GTCTC 3 cut(s) 72, 845, 1244
BstMBI GATC 9 cut(s) 41, 67, 223, 254, 260, 290, 1027, 1294, 1396
BstMWI GCNNNNNNNGC 9 cut(s) 183, 350, 359, 626, 704, 1055, 1229, 1238, 1289
BstNI CCWGG 2 cut(s) 405, 1419
BstNSI RCATGY 1 cut(s) 500
BstPAI GACNNNNGTC 1 cut(s) 84
BstPI GGTNACC 2 cut(s) 107, 897
BstSCI CCNGG 2 cut(s) 403, 1417
BstSFI CTRYAG 1 cut(s) 1558
BstUI CGCG 1 cut(s) 186
BstV1I GCAGC 5 cut(s) 351, 565, 772, 817, 1365
BstV2I GAAGAC 1 cut(s) 1341
BstX2I RGATCY 2 cut(s) 290, 1027
BstYI RGATCY 2 cut(s) 290, 1027
BstZ17I GTATAC 1 cut(s) 511
BsuRI GGCC 2 cut(s) 760, 1190
BtgI CCRYGG 2 cut(s) 184, 958
BtrI CACGTC 1 cut(s) 503
BtsCI GGATG 1 cut(s) 1351
BtsIMutI CAGTG 3 cut(s) 912, 1518, 1567
BveI ACCTGC 3 cut(s) 358, 611, 1186
Cac8I GCNNGC 7 cut(s) 26, 320, 465, 486, 498, 1104, 1114
CciI TCATGA 1 cut(s) 652
CfoI GCGC 2 cut(s) 364, 1466
Cfr13I GGNCC 3 cut(s) 797, 872, 950
Cfr42I CCGCGG 1 cut(s) 187
CseI GACGC 1 cut(s) 7
Csp6I GTAC 5 cut(s) 169, 324, 413, 1154, 1481
CspCI CAANNNNNGTGG 2 cut(s) 19, 54
CviAII CATG 8 cut(s) 340, 475, 497, 574, 653, 1177, 1192, 1339
CviQI GTAC 5 cut(s) 169, 324, 413, 1154, 1481
DdeI CTNAG 4 cut(s) 480, 867, 921, 1278
DpnI GATC 9 cut(s) 43, 69, 225, 256, 262, 292, 1029, 1296, 1398
DpnII GATC 9 cut(s) 41, 67, 223, 254, 260, 290, 1027, 1294, 1396
DraI TTTAAA 1 cut(s) 1071
DraIII CACNNNGTG 1 cut(s) 851
EaeI YGGCCR 1 cut(s) 1188
Eam1104I CTCTTC 3 cut(s) 456, 1308, 1530
EarI CTCTTC 3 cut(s) 456, 1308, 1530
Ecl136II GAGCTC 1 cut(s) 57
Eco24I GRGCYC 1 cut(s) 59
Eco31I GGTCTC 2 cut(s) 72, 845
Eco47I GGWCC 3 cut(s) 797, 872, 950
Eco47III AGCGCT 1 cut(s) 363
Eco53kI GAGCTC 1 cut(s) 57
Eco57I CTGAAG 1 cut(s) 936
Eco91I GGTNACC 2 cut(s) 107, 897
EcoICRI GAGCTC 1 cut(s) 57
EcoNI CCTNNNNNAGG 1 cut(s) 974
EcoO109I RGGNCCY 1 cut(s) 872
EcoO65I GGTNACC 2 cut(s) 107, 897
EcoRII CCWGG 2 cut(s) 403, 1417
EcoT38I GRGCYC 1 cut(s) 59
FaeI CATG 8 cut(s) 343, 478, 500, 577, 656, 1180, 1195, 1342
FalI AAGNNNNNCTT 2 cut(s) 1421, 1453
FaqI GGGAC 2 cut(s) 299, 885
FatI CATG 8 cut(s) 339, 474, 496, 573, 652, 1176, 1191, 1338
FauNDI CATATG 1 cut(s) 444
FbaI TGATCA 3 cut(s) 223, 1294, 1396
FblI GTMKAC 1 cut(s) 510
Fnu4HI GCNGC 6 cut(s) 184, 365, 579, 786, 831, 1354
FokI GGATG 1 cut(s) 1358
FriOI GRGCYC 1 cut(s) 59
Fsp4HI GCNGC 6 cut(s) 184, 365, 579, 786, 831, 1354
FspBI CTAG 2 cut(s) 801, 1217
GlaI GCGC 2 cut(s) 363, 1465
GluI GCNGC 6 cut(s) 184, 365, 579, 786, 831, 1354
GsaI CCCAGC 1 cut(s) 357
GsuI CTGGAG 1 cut(s) 426
HaeII RGCGCY 1 cut(s) 365
HaeIII GGCC 2 cut(s) 760, 1190
HapII CCGG 1 cut(s) 1099
HgaI GACGC 1 cut(s) 7
HhaI GCGC 2 cut(s) 364, 1466
Hin1I GRCGYC 1 cut(s) 18
Hin1II CATG 8 cut(s) 343, 478, 500, 577, 656, 1180, 1195, 1342
Hin6I GCGC 2 cut(s) 362, 1464
HinP1I GCGC 2 cut(s) 362, 1464
HincII GTYRAC 1 cut(s) 1204
HindII GTYRAC 1 cut(s) 1204
HinfI GANTC 4 cut(s) 478, 1011, 1210, 1414
HpaII CCGG 1 cut(s) 1099
HphI GGTGA 7 cut(s) 119, 635, 809, 1091, 1259, 1316, 1384
Hpy166II GTNNAC 3 cut(s) 511, 1204, 1525
Hpy188I TCNGA 4 cut(s) 7, 46, 924, 1502
Hpy188III TCNNGA 9 cut(s) 71, 89, 215, 227, 258, 653, 973, 1025, 1532
Hpy8I GTNNAC 3 cut(s) 511, 1204, 1525
Hpy99I CGWCG 1 cut(s) 507
HpyAV CCTTC 5 cut(s) 8, 306, 750, 970, 1423
HpyCH4III ACNGT 8 cut(s) 113, 688, 881, 1036, 1067, 1096, 1513, 1562
HpyCH4IV ACGT 5 cut(s) 49, 265, 502, 513, 1044
HpyF10VI GCNNNNNNNGC 9 cut(s) 183, 350, 359, 626, 704, 1055, 1229, 1238, 1289
HpyF3I CTNAG 4 cut(s) 480, 867, 921, 1278
HpySE526I ACGT 5 cut(s) 49, 265, 502, 513, 1044
Hsp92I GRCGYC 1 cut(s) 18
Hsp92II CATG 8 cut(s) 343, 478, 500, 577, 656, 1180, 1195, 1342
HspAI GCGC 2 cut(s) 362, 1464
Ksp22I TGATCA 3 cut(s) 223, 1294, 1396
KspI CCGCGG 1 cut(s) 187
Kzo9I GATC 9 cut(s) 41, 67, 223, 254, 260, 290, 1027, 1294, 1396
LguI GCTCTTC 1 cut(s) 456
LmnI GCTCC 2 cut(s) 863, 1220
Lsp1109I GCAGC 5 cut(s) 351, 565, 772, 817, 1365
LweI GCATC 4 cut(s) 220, 390, 450, 616
MaeI CTAG 2 cut(s) 801, 1217
MaeII ACGT 5 cut(s) 49, 265, 502, 513, 1044
MaeIII GTNAC 5 cut(s) 107, 897, 1036, 1304, 1505
MalI GATC 9 cut(s) 43, 69, 225, 256, 262, 292, 1029, 1296, 1398
MboI GATC 9 cut(s) 41, 67, 223, 254, 260, 290, 1027, 1294, 1396
MboII GAAGA 8 cut(s) 156, 443, 670, 704, 1205, 1325, 1346, 1547
MfeI CAATTG 1 cut(s) 549
MflI RGATCY 2 cut(s) 290, 1027
MhlI GDGCHC 2 cut(s) 59, 1060
MlsI TGGCCA 1 cut(s) 1190
MluCI AATT 6 cut(s) 31, 418, 549, 592, 1358, 1496
MluNI TGGCCA 1 cut(s) 1190
MlyI GAGTC 1 cut(s) 472
MmeI TCCRAC 1 cut(s) 1055
Mox20I TGGCCA 1 cut(s) 1190
MroXI GAANNNNTTC 1 cut(s) 1433
MscI TGGCCA 1 cut(s) 1190
MseI TTAA 4 cut(s) 648, 822, 1070, 1091
Msp20I TGGCCA 1 cut(s) 1190
MspA1I CMGCKG 1 cut(s) 186
MspI CCGG 1 cut(s) 1099
MspR9I CCNGG 2 cut(s) 405, 1419
MunI CAATTG 1 cut(s) 549
Mva1269I GAATGC 2 cut(s) 1355, 1522
MvaI CCWGG 2 cut(s) 405, 1419
MvnI CGCG 1 cut(s) 186
MwoI GCNNNNNNNGC 9 cut(s) 183, 350, 359, 626, 704, 1055, 1229, 1238, 1289
NdeI CATATG 1 cut(s) 444
NdeII GATC 9 cut(s) 41, 67, 223, 254, 260, 290, 1027, 1294, 1396
NlaIII CATG 8 cut(s) 343, 478, 500, 577, 656, 1180, 1195, 1342
NlaIV GGNNCC 4 cut(s) 345, 853, 873, 1029
NmuCI GTSAC 3 cut(s) 107, 1036, 1304
NspI RCATGY 1 cut(s) 500
PaeI GCATGC 1 cut(s) 500
PagI TCATGA 1 cut(s) 652
PaqCI CACCTGC 2 cut(s) 358, 611
PciSI GCTCTTC 1 cut(s) 456
PctI GAATGC 2 cut(s) 1355, 1522
PdmI GAANNNNTTC 1 cut(s) 1433
PfeI GAWTC 3 cut(s) 1011, 1210, 1414
Pfl23II CGTACG 1 cut(s) 168
PflMI CCANNNNNTGG 3 cut(s) 353, 574, 1424
PkrI GCNGC 6 cut(s) 185, 366, 580, 787, 832, 1355
PleI GAGTC 1 cut(s) 472
PpsI GAGTC 1 cut(s) 472
PpuMI RGGWCCY 1 cut(s) 872
PshAI GACNNNNGTC 1 cut(s) 84
PshBI ATTAAT 1 cut(s) 648
Psp124BI GAGCTC 1 cut(s) 59
Psp5II RGGWCCY 1 cut(s) 872
Psp6I CCWGG 2 cut(s) 403, 1417
PspEI GGTNACC 2 cut(s) 107, 897
PspFI CCCAGC 1 cut(s) 353
PspGI CCWGG 2 cut(s) 403, 1417
PspLI CGTACG 1 cut(s) 168
PspN4I GGNNCC 4 cut(s) 345, 853, 873, 1029
PspPI GGNCC 3 cut(s) 797, 872, 950
PspPPI RGGWCCY 1 cut(s) 872
PsuI RGATCY 2 cut(s) 290, 1027
RsaI GTAC 5 cut(s) 170, 325, 414, 1155, 1482
RsaNI GTAC 5 cut(s) 169, 324, 413, 1154, 1481
SacI GAGCTC 1 cut(s) 59
SacII CCGCGG 1 cut(s) 187
SapI GCTCTTC 1 cut(s) 456
SaqAI TTAA 4 cut(s) 648, 822, 1070, 1091
SatI GCNGC 6 cut(s) 184, 365, 579, 786, 831, 1354
Sau3AI GATC 9 cut(s) 41, 67, 223, 254, 260, 290, 1027, 1294, 1396
Sau96I GGNCC 3 cut(s) 797, 872, 950
SchI GAGTC 1 cut(s) 472
ScrFI CCNGG 2 cut(s) 405, 1419
SduI GDGCHC 2 cut(s) 59, 1060
SfaNI GCATC 4 cut(s) 220, 390, 450, 616
SfcI CTRYAG 1 cut(s) 1558
Sfr303I CCGCGG 1 cut(s) 187
SgrBI CCGCGG 1 cut(s) 187
SinI GGWCC 3 cut(s) 797, 872, 950
SmlI CTYRAG 2 cut(s) 280, 468
SmoI CTYRAG 2 cut(s) 280, 468
SphI GCATGC 1 cut(s) 500
Sse9I AATT 6 cut(s) 31, 418, 549, 592, 1358, 1496
SsiI CCGC 4 cut(s) 184, 186, 629, 1404
SspI AATATT 1 cut(s) 1329
SspMI CTAG 2 cut(s) 801, 1217
SstI GAGCTC 1 cut(s) 59
StyD4I CCNGG 2 cut(s) 403, 1417
TaaI ACNGT 8 cut(s) 113, 688, 881, 1036, 1067, 1096, 1513, 1562
TaiI ACGT 5 cut(s) 52, 268, 505, 516, 1047
TaqI TCGA 3 cut(s) 70, 204, 1323
TaqII GACCGA 1 cut(s) 96
TasI AATT 6 cut(s) 31, 418, 549, 592, 1358, 1496
TatI WGTACW 1 cut(s) 1480
TauI GCSGC 1 cut(s) 186
TfiI GAWTC 3 cut(s) 1011, 1210, 1414
Tru1I TTAA 4 cut(s) 648, 822, 1070, 1091
Tru9I TTAA 4 cut(s) 648, 822, 1070, 1091
TscAI CASTG 3 cut(s) 919, 1518, 1567
TseFI GTSAC 3 cut(s) 107, 1036, 1304
TseI GCWGC 5 cut(s) 364, 578, 785, 830, 1353
Tsp45I GTSAC 3 cut(s) 107, 1036, 1304
TspDTI ATGAA 3 cut(s) 411, 1326, 1362
TspGWI ACGGA 2 cut(s) 367, 947
TspRI CASTG 3 cut(s) 919, 1518, 1567
Van91I CCANNNNNTGG 3 cut(s) 353, 574, 1424
VpaK11BI GGWCC 3 cut(s) 797, 872, 950
VspI ATTAAT 1 cut(s) 648
XagI CCTNNNNNAGG 1 cut(s) 974
XapI RAATTY 4 cut(s) 418, 592, 1358, 1496
XceI RCATGY 1 cut(s) 500
XcmI CCANNNNNNNNNTGG 1 cut(s) 1183
XmiI GTMKAC 1 cut(s) 510
XmnI GAANNNNTTC 1 cut(s) 1433
XspI CTAG 2 cut(s) 801, 1217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.