RchiOBHm_Chr5g0008051

U2 snRNP auxiliary factor large subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0008127
Physical Location & Seq
Reverse (-)
5176748 .. 5182219
5472 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28905

Sequence Viewer

Length: 1716 bp
ATGGAGCTAAAATACGTAGTCTTCACATACCTCAGATCCAGCTTCTTCTTCTTCATCTTCATCGGCTCTTCTTCTGGTTTCAGCGAATTTCCAAAACTAGGGTCTGGACCTGAAAATCGAGCAACAATGTCAGACTACGATGGCAGCAAGCACAAGTCTCATGGATCGGAGCGTGAGAGCTCATGGAGAGAGCGAGAGAGTGGTCATGATAGGGAGAGAGACGATGACCGGTATTCGAGAGATGCAAGGGACTACAAGGATAGAAGTGGAAGGTTTGACAGAGGGAGGAACAAGTATAGTGGCTATAGCGGCCGTCGGAATCAGGATTATGACAGGAGTCGCGATTATGATCAAGATAGGCATCGCGATTATGATCAAGATAGAGATAGGAGGCATAGACATAGGTCGCCTTCGCCTTCAAGGGAAGAAGATAGGGAGAGATCTTCCCGTTCTCGTTCAAAGAGCAAGCGCGCAAGTGGTTTTGACATGGCACCACCTGCTGGGGCAGTGCTACCTACTGCTGCTGCTTCAGGTATTCCACAAACAATGCCGGGAGTAGTACAAAATGTAGTACCATTCGGGACAGCATATCCGACACTTCCCATGATGCCAGCCCAAGCCATGACTCAACAGGCTACAAGGCATGCACGACGGGTATATGTTGGCGGCCTTCCCCCACTGGCCAATGAGCAGACAATTGCCACGTTCTTTAGTCAAGTCATGGCTGCCATTGGAGGGAATTCAGTTGGTCCAGTATCTGAACTGGCAGGTGATGCGGTAGTAAATGTCTACATAAATCATGAGAAGAAGTTTGCATTTGTGGAGATGAGAACGGTCGAAGAAGCGAGTAATGCGATGGCCTTAGATGGGATTATATTTGAGGGGGTTGCTGTGAGGGTACGAAGGCCAACAGACTACAATCCTACATTAGCTGCAGCACTTGGTCCTAACCAACCAAGTCCCCATCTCAACTTGGCTGCTGTGGGGCTAACACAAGGTGCTGTTGGTGGAGCAGAGGGACCTGATCGTATCTTTGTGGGTGGACTACCATACTACTTCACTGAAGCACAGATAAGGGAATTGCTACAATCCTTTGGACCACTTCGTGGATTTGACCTCGTGAAGGATAAAGATACAGGAAATTCTAAAGGATATGGGTTCTGTGTTTATCAGGATCCAGCTGTGACCGACATTGCTTGTGGTGCTCTTAATGGCTTAAAAATGGGCGATAAAACTTTAACCGTCCGGCGTGCTACTGCCAACAGCGTGCAATCTAAATCAGAGCAAGAAAATATCTTGGTACAGGCACAACAGCATATTGCTATGCAGAAAATGGCGATGCAGGTTGTTGACATGAATCGTTTTGGGAATGGGATGGCATCAGTGGTAACTACAGAAATGCCCACAAAAGTCCTTTGTTTGACAGAGGCAATTACTGCTGATCAACTAGGTGACAATGAAGAGTACGTGGAAATATTAGAAGACATGAAGGATGAATGCAGCAAATTTGGAACTCTGTTGAATGTTGTTATTCCCCGTTCTAATCAAGATGGAGAAGAGATCTCAGGTGTTGGAAAGGTGTTCTTGGAATATTCTGATACTGGAAGTTGTGCCAATGCAAAGAACGTACTTGGTGGGAGAAAATTTGGAGGGAACATAGTGAATGCGTATTATTATCCGGAAGACAAATACTATAGCAAAGACTATAGCGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
RRM_1

Protein Analysis

571

Amino Acids

63.21

Weight (kDa)

6.41

Isoelectric Point (pI)

55.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 344 - 413 2.1e-16 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 505, 758
Acc36I ACCTGC 3 cut(s) 505, 758, 1333
AccB1I GGYRCC 1 cut(s) 490
AccB7I CCANNNNNTGG 2 cut(s) 500, 1106
AccI GTMKAC 1 cut(s) 789
AccII CGCG 3 cut(s) 342, 366, 471
AccIII TCCGGA 1 cut(s) 1678
AciI CCGC 3 cut(s) 309, 666, 776
AclWI GGATC 4 cut(s) 30, 172, 1169, 1182
AcoI YGGCCR 2 cut(s) 310, 681
AcsI RAATTY 5 cut(s) 86, 739, 1141, 1505, 1643
AcuI CTGAAG 2 cut(s) 513, 1083
AdeI CACNNNGTG 2 cut(s) 998, 1106
AfaI GTAC 6 cut(s) 561, 573, 900, 1302, 1466, 1629
AfiI CCNNNNNNNGG 6 cut(s) 98, 500, 735, 867, 1106, 1123
AgeI ACCGGT 1 cut(s) 228
AgsI TTSAA 3 cut(s) 420, 459, 1522
AluBI AGCT 5 cut(s) 7, 42, 180, 932, 1181
AluI AGCT 5 cut(s) 7, 42, 180, 932, 1181
Alw21I GWGCWC 2 cut(s) 182, 1207
Alw26I GTCTC 2 cut(s) 162, 213
AlwI GGATC 4 cut(s) 30, 172, 1169, 1182
AlwNI CAGNNNCTG 1 cut(s) 758
Aor13HI TCCGGA 1 cut(s) 1678
AoxI GGCC 5 cut(s) 310, 667, 681, 858, 905
ApeKI GCWGC 8 cut(s) 144, 521, 524, 725, 932, 935, 977, 1500
ApoI RAATTY 5 cut(s) 86, 739, 1141, 1505, 1643
ArsI GACNNNNNNTTYG 2 cut(s) 86, 118
AsiGI ACCGGT 1 cut(s) 228
AspLEI GCGC 3 cut(s) 471, 473, 1712
AspS9I GGNCC 5 cut(s) 107, 749, 944, 1019, 1097
AsuC2I CCSGG 1 cut(s) 552
AsuHPI GGTGA 2 cut(s) 782, 1463
AvaII GGWCC 5 cut(s) 107, 749, 944, 1019, 1097
BalI TGGCCA 1 cut(s) 683
BamHI GGATCC 1 cut(s) 1174
BanI GGYRCC 1 cut(s) 490
BanII GRGCYC 1 cut(s) 182
BauI CACGAG 1 cut(s) 1118
BbsI GAAGAC 3 cut(s) 13, 1488, 1689
Bbv12I GWGCWC 2 cut(s) 182, 1207
BbvI GCAGC 8 cut(s) 156, 508, 511, 712, 919, 947, 964, 1512
BccI CCATC 6 cut(s) 134, 850, 860, 972, 1369, 1544
BceAI ACGGC 1 cut(s) 297
BclI TGATCA 3 cut(s) 349, 373, 1441
BcnI CCSGG 1 cut(s) 552
BcoDI GTCTC 2 cut(s) 162, 213
BfaI CTAG 2 cut(s) 98, 1448
BfmI CTRYAG 5 cut(s) 304, 933, 1392, 1693, 1705
BfuAI ACCTGC 3 cut(s) 505, 758, 1333
BglII AGATCT 2 cut(s) 440, 1560
Bme1390I CCNGG 1 cut(s) 552
Bme18I GGWCC 5 cut(s) 107, 749, 944, 1019, 1097
BmgT120I GGNCC 5 cut(s) 107, 749, 944, 1019, 1097
BmiI GGNNCC 3 cut(s) 492, 1020, 1176
BmrFI CCNGG 1 cut(s) 552
BmsI GCATC 6 cut(s) 232, 370, 597, 763, 1329, 1388
BoxI GACNNNNGTC 2 cut(s) 336, 403
BpiI GAAGAC 3 cut(s) 13, 1488, 1689
BpuMI CCSGG 1 cut(s) 552
BsaAI YACGTR 2 cut(s) 16, 1468
BsaBI GATNNNNATC 3 cut(s) 348, 360, 372
BsaWI WCCGGW 2 cut(s) 228, 1678
Bsc4I CCNNNNNNNGG 6 cut(s) 98, 500, 735, 867, 1106, 1123
Bse118I RCCGGY 1 cut(s) 228
Bse1I ACTGG 4 cut(s) 684, 752, 768, 1606
Bse3DI GCAATG 1 cut(s) 1191
Bse8I GATNNNNATC 3 cut(s) 348, 360, 372
BseAI TCCGGA 1 cut(s) 1678
BseGI GGATG 2 cut(s) 1380, 1498
BseJI GATNNNNATC 3 cut(s) 348, 360, 372
BseLI CCNNNNNNNGG 6 cut(s) 98, 500, 735, 867, 1106, 1123
BseMI GCAATG 1 cut(s) 1191
BseMII CTCAG 2 cut(s) 46, 1578
BseNI ACTGG 4 cut(s) 684, 752, 768, 1606
BsePI GCGCGC 1 cut(s) 469
BseX3I CGGCCG 1 cut(s) 310
BseXI GCAGC 8 cut(s) 156, 508, 511, 712, 919, 947, 964, 1512
BseYI CCCAGC 1 cut(s) 500
Bsh1236I CGCG 3 cut(s) 342, 366, 471
Bsh1285I CGRYCG 2 cut(s) 313, 837
BshFI GGCC 5 cut(s) 312, 669, 683, 860, 907
BshNI GGYRCC 1 cut(s) 490
BshTI ACCGGT 1 cut(s) 228
BsiEI CGRYCG 2 cut(s) 313, 837
BsiHKAI GWGCWC 2 cut(s) 182, 1207
BsiSI CCGG 4 cut(s) 229, 551, 1246, 1679
BslFI GGGAC 4 cut(s) 263, 595, 945, 1032
BslI CCNNNNNNNGG 6 cut(s) 98, 500, 735, 867, 1106, 1123
BsmAI GTCTC 2 cut(s) 162, 213
BsmBI CGTCTC 1 cut(s) 213
BsmFI GGGAC 4 cut(s) 263, 595, 945, 1032
BsmI GAATGC 2 cut(s) 1502, 1669
BsnI GGCC 5 cut(s) 312, 669, 683, 860, 907
Bsp1286I GDGCHC 2 cut(s) 182, 1207
Bsp13I TCCGGA 1 cut(s) 1678
Bsp143I GATC 9 cut(s) 35, 164, 349, 373, 440, 1024, 1174, 1441, 1560
Bsp68I TCGCGA 2 cut(s) 342, 366
BspACI CCGC 3 cut(s) 309, 666, 776
BspANI GGCC 5 cut(s) 312, 669, 683, 860, 907
BspCNI CTCAG 2 cut(s) 45, 1577
BspEI TCCGGA 1 cut(s) 1678
BspFNI CGCG 3 cut(s) 342, 366, 471
BspHI TCATGA 2 cut(s) 205, 799
BspLI GGNNCC 3 cut(s) 492, 1020, 1176
BspMAI CTGCAG 1 cut(s) 937
BspMI ACCTGC 3 cut(s) 505, 758, 1333
BspPI GGATC 4 cut(s) 30, 172, 1169, 1182
BspQI GCTCTTC 1 cut(s) 73
BspT107I GGYRCC 1 cut(s) 490
BsrDI GCAATG 1 cut(s) 1191
BsrFI RCCGGY 1 cut(s) 228
BsrI ACTGG 4 cut(s) 684, 752, 768, 1606
BssAI RCCGGY 1 cut(s) 228
BssHII GCGCGC 1 cut(s) 469
BssMI GATC 9 cut(s) 35, 164, 349, 373, 440, 1024, 1174, 1441, 1560
BssSI CACGAG 1 cut(s) 1118
Bst2BI CACGAG 1 cut(s) 1118
Bst4CI ACNGT 2 cut(s) 835, 1243
Bst6I CTCTTC 3 cut(s) 73, 1455, 1551
BstAPI GCANNNNNTGC 3 cut(s) 497, 773, 1436
BstBAI YACGTR 2 cut(s) 16, 1468
BstC8I GCNNGC 7 cut(s) 149, 467, 471, 612, 645, 1251, 1268
BstDEI CTNAG 3 cut(s) 32, 862, 1564
BstENI CCTNNNNNAGG 1 cut(s) 1121
BstF5I GGATG 2 cut(s) 1380, 1498
BstFNI CGCG 3 cut(s) 342, 366, 471
BstHHI GCGC 3 cut(s) 471, 473, 1712
BstKTI GATC 9 cut(s) 38, 167, 352, 376, 443, 1027, 1177, 1444, 1563
BstMAI GTCTC 2 cut(s) 162, 213
BstMBI GATC 9 cut(s) 35, 164, 349, 373, 440, 1024, 1174, 1441, 1560
BstMCI CGRYCG 2 cut(s) 313, 837
BstMWI GCNNNNNNNGC 6 cut(s) 309, 497, 773, 851, 1202, 1436
BstNSI RCATGY 1 cut(s) 647
BstPAI GACNNNNGTC 2 cut(s) 336, 403
BstSCI CCNGG 1 cut(s) 550
BstSFI CTRYAG 5 cut(s) 304, 933, 1392, 1693, 1705
BstSNI TACGTA 1 cut(s) 16
BstUI CGCG 3 cut(s) 342, 366, 471
BstV1I GCAGC 8 cut(s) 156, 508, 511, 712, 919, 947, 964, 1512
BstV2I GAAGAC 3 cut(s) 13, 1488, 1689
BstX2I RGATCY 4 cut(s) 35, 440, 1174, 1560
BstYI RGATCY 4 cut(s) 35, 440, 1174, 1560
BstZI CGGCCG 1 cut(s) 310
BsuRI GGCC 5 cut(s) 312, 669, 683, 860, 907
BtgZI GCGATG 3 cut(s) 347, 869, 1352
BtsCI GGATG 2 cut(s) 1380, 1498
BtsI GCAGTG 1 cut(s) 513
BtsIMutI CAGTG 4 cut(s) 513, 677, 1059, 1389
BtuMI TCGCGA 2 cut(s) 342, 366
BveI ACCTGC 3 cut(s) 505, 758, 1333
Cac8I GCNNGC 7 cut(s) 149, 467, 471, 612, 645, 1251, 1268
CaiI CAGNNNCTG 1 cut(s) 758
CciI TCATGA 2 cut(s) 205, 799
CfoI GCGC 3 cut(s) 471, 473, 1712
Cfr10I RCCGGY 1 cut(s) 228
Cfr13I GGNCC 5 cut(s) 107, 749, 944, 1019, 1097
Csp6I GTAC 6 cut(s) 560, 572, 899, 1301, 1465, 1628
CspAI ACCGGT 1 cut(s) 228
CspCI CAANNNNNGTGG 2 cut(s) 280, 315
CviQI GTAC 6 cut(s) 560, 572, 899, 1301, 1465, 1628
DdeI CTNAG 3 cut(s) 32, 862, 1564
DpnI GATC 9 cut(s) 37, 166, 351, 375, 442, 1026, 1176, 1443, 1562
DpnII GATC 9 cut(s) 35, 164, 349, 373, 440, 1024, 1174, 1441, 1560
DraIII CACNNNGTG 2 cut(s) 998, 1106
EaeI YGGCCR 2 cut(s) 310, 681
EagI CGGCCG 1 cut(s) 310
Eam1104I CTCTTC 3 cut(s) 73, 1455, 1551
EarI CTCTTC 3 cut(s) 73, 1455, 1551
Ecl136II GAGCTC 1 cut(s) 180
EclXI CGGCCG 1 cut(s) 310
Eco105I TACGTA 1 cut(s) 16
Eco24I GRGCYC 1 cut(s) 182
Eco47I GGWCC 5 cut(s) 107, 749, 944, 1019, 1097
Eco52I CGGCCG 1 cut(s) 310
Eco53kI GAGCTC 1 cut(s) 180
Eco57I CTGAAG 2 cut(s) 513, 1083
EcoICRI GAGCTC 1 cut(s) 180
EcoNI CCTNNNNNAGG 1 cut(s) 1121
EcoO109I RGGNCCY 1 cut(s) 1019
EcoRI GAATTC 1 cut(s) 739
EcoT38I GRGCYC 1 cut(s) 182
Esp3I CGTCTC 1 cut(s) 213
FalI AAGNNNNNCTT 2 cut(s) 1568, 1600
FaqI GGGAC 4 cut(s) 263, 595, 945, 1032
FbaI TGATCA 3 cut(s) 349, 373, 1441
FblI GTMKAC 1 cut(s) 789
FokI GGATG 2 cut(s) 1387, 1505
FriOI GRGCYC 1 cut(s) 182
FspBI CTAG 2 cut(s) 98, 1448
GlaI GCGC 3 cut(s) 470, 472, 1711
GsaI CCCAGC 1 cut(s) 504
HaeIII GGCC 5 cut(s) 312, 669, 683, 860, 907
HapII CCGG 4 cut(s) 229, 551, 1246, 1679
HhaI GCGC 3 cut(s) 471, 473, 1712
Hin6I GCGC 3 cut(s) 469, 471, 1710
HinP1I GCGC 3 cut(s) 469, 471, 1710
HincII GTYRAC 1 cut(s) 1351
HindII GTYRAC 1 cut(s) 1351
HinfI GANTC 4 cut(s) 319, 337, 625, 1357
HpaII CCGG 4 cut(s) 229, 551, 1246, 1679
HphI GGTGA 2 cut(s) 782, 1463
Hpy166II GTNNAC 3 cut(s) 790, 1043, 1351
Hpy188I TCNGA 8 cut(s) 35, 133, 169, 318, 594, 760, 1282, 1597
Hpy8I GTNNAC 3 cut(s) 790, 1043, 1351
Hpy99I CGWCG 2 cut(s) 318, 654
HpyAV CCTTC 7 cut(s) 264, 420, 426, 680, 897, 1117, 1483
HpyCH4III ACNGT 2 cut(s) 835, 1243
HpyCH4IV ACGT 4 cut(s) 15, 704, 1467, 1626
HpyCH4V TGCA 9 cut(s) 245, 647, 815, 935, 1270, 1327, 1342, 1500, 1619
HpyF10VI GCNNNNNNNGC 6 cut(s) 309, 497, 773, 851, 1202, 1436
HpyF3I CTNAG 3 cut(s) 32, 862, 1564
HpySE526I ACGT 4 cut(s) 15, 704, 1467, 1626
HspAI GCGC 3 cut(s) 469, 471, 1710
Kpn2I TCCGGA 1 cut(s) 1678
Ksp22I TGATCA 3 cut(s) 349, 373, 1441
Kzo9I GATC 9 cut(s) 35, 164, 349, 373, 440, 1024, 1174, 1441, 1560
LguI GCTCTTC 1 cut(s) 73
LmnI GCTCC 3 cut(s) 4, 169, 1010
Lsp1109I GCAGC 8 cut(s) 156, 508, 511, 712, 919, 947, 964, 1512
LweI GCATC 6 cut(s) 232, 370, 597, 763, 1329, 1388
MaeI CTAG 2 cut(s) 98, 1448
MaeII ACGT 4 cut(s) 15, 704, 1467, 1626
MaeIII GTNAC 3 cut(s) 1183, 1387, 1451
MalI GATC 9 cut(s) 37, 166, 351, 375, 442, 1026, 1176, 1443, 1562
MboI GATC 9 cut(s) 35, 164, 349, 373, 440, 1024, 1174, 1441, 1560
MfeI CAATTG 1 cut(s) 696
MflI RGATCY 4 cut(s) 35, 440, 1174, 1560
MhlI GDGCHC 2 cut(s) 182, 1207
MlsI TGGCCA 1 cut(s) 683
MluCI AATT 8 cut(s) 86, 696, 739, 1079, 1141, 1431, 1505, 1643
MluNI TGGCCA 1 cut(s) 683
MlyI GAGTC 2 cut(s) 346, 619
MmeI TCCRAC 3 cut(s) 296, 617, 1552
Mox20I TGGCCA 1 cut(s) 683
MroI TCCGGA 1 cut(s) 1678
MscI TGGCCA 1 cut(s) 683
MseI TTAA 3 cut(s) 1209, 1217, 1238
Msp20I TGGCCA 1 cut(s) 683
MspA1I CMGCKG 1 cut(s) 1181
MspI CCGG 4 cut(s) 229, 551, 1246, 1679
MspR9I CCNGG 1 cut(s) 552
MunI CAATTG 1 cut(s) 696
Mva1269I GAATGC 2 cut(s) 1502, 1669
MvnI CGCG 3 cut(s) 342, 366, 471
MwoI GCNNNNNNNGC 6 cut(s) 309, 497, 773, 851, 1202, 1436
NciI CCSGG 1 cut(s) 552
NdeII GATC 9 cut(s) 35, 164, 349, 373, 440, 1024, 1174, 1441, 1560
NlaIV GGNNCC 3 cut(s) 492, 1020, 1176
NmuCI GTSAC 2 cut(s) 1183, 1451
NruI TCGCGA 2 cut(s) 342, 366
NspI RCATGY 1 cut(s) 647
PaeI GCATGC 1 cut(s) 647
PagI TCATGA 2 cut(s) 205, 799
PaqCI CACCTGC 2 cut(s) 505, 758
PauI GCGCGC 1 cut(s) 469
PciSI GCTCTTC 1 cut(s) 73
PctI GAATGC 2 cut(s) 1502, 1669
PfeI GAWTC 2 cut(s) 319, 1357
PflMI CCANNNNNTGG 2 cut(s) 500, 1106
PinAI ACCGGT 1 cut(s) 228
PleI GAGTC 2 cut(s) 345, 619
PpsI GAGTC 2 cut(s) 345, 619
Ppu21I YACGTR 2 cut(s) 16, 1468
PpuMI RGGWCCY 1 cut(s) 1019
PshAI GACNNNNGTC 2 cut(s) 336, 403
Psp124BI GAGCTC 1 cut(s) 182
Psp5II RGGWCCY 1 cut(s) 1019
PspFI CCCAGC 1 cut(s) 500
PspN4I GGNNCC 3 cut(s) 492, 1020, 1176
PspPI GGNCC 5 cut(s) 107, 749, 944, 1019, 1097
PspPPI RGGWCCY 1 cut(s) 1019
PstI CTGCAG 1 cut(s) 937
PstNI CAGNNNCTG 1 cut(s) 758
PsuI RGATCY 4 cut(s) 35, 440, 1174, 1560
PteI GCGCGC 1 cut(s) 469
PvuII CAGCTG 1 cut(s) 1181
RruI TCGCGA 2 cut(s) 342, 366
RsaI GTAC 6 cut(s) 561, 573, 900, 1302, 1466, 1629
RsaNI GTAC 6 cut(s) 560, 572, 899, 1301, 1465, 1628
SacI GAGCTC 1 cut(s) 182
SapI GCTCTTC 1 cut(s) 73
SaqAI TTAA 3 cut(s) 1209, 1217, 1238
Sau3AI GATC 9 cut(s) 35, 164, 349, 373, 440, 1024, 1174, 1441, 1560
Sau96I GGNCC 5 cut(s) 107, 749, 944, 1019, 1097
SchI GAGTC 2 cut(s) 346, 619
ScrFI CCNGG 1 cut(s) 552
SduI GDGCHC 2 cut(s) 182, 1207
SfaNI GCATC 6 cut(s) 232, 370, 597, 763, 1329, 1388
SfcI CTRYAG 5 cut(s) 304, 933, 1392, 1693, 1705
SinI GGWCC 5 cut(s) 107, 749, 944, 1019, 1097
SnaBI TACGTA 1 cut(s) 16
SphI GCATGC 1 cut(s) 647
Sse9I AATT 8 cut(s) 86, 696, 739, 1079, 1141, 1431, 1505, 1643
SsiI CCGC 3 cut(s) 309, 666, 776
SspI AATATT 2 cut(s) 1476, 1592
SspMI CTAG 2 cut(s) 98, 1448
SstI GAGCTC 1 cut(s) 182
StyD4I CCNGG 1 cut(s) 550
TaaI ACNGT 2 cut(s) 835, 1243
TaiI ACGT 4 cut(s) 18, 707, 1470, 1629
TaqI TCGA 3 cut(s) 118, 236, 837
TaqII GACCGA 1 cut(s) 1202
TasI AATT 8 cut(s) 86, 696, 739, 1079, 1141, 1431, 1505, 1643
TatI WGTACW 1 cut(s) 559
TauI GCSGC 2 cut(s) 312, 669
TfiI GAWTC 2 cut(s) 319, 1357
Tru1I TTAA 3 cut(s) 1209, 1217, 1238
Tru9I TTAA 3 cut(s) 1209, 1217, 1238
TscAI CASTG 4 cut(s) 513, 684, 1066, 1389
TseFI GTSAC 2 cut(s) 1183, 1451
TseI GCWGC 8 cut(s) 144, 521, 524, 725, 932, 935, 977, 1500
Tsp45I GTSAC 2 cut(s) 1183, 1451
TspDTI ATGAA 6 cut(s) 43, 49, 1370, 1473, 1502, 1509
TspRI CASTG 4 cut(s) 513, 684, 1066, 1389
Van91I CCANNNNNTGG 2 cut(s) 500, 1106
VpaK11BI GGWCC 5 cut(s) 107, 749, 944, 1019, 1097
XagI CCTNNNNNAGG 1 cut(s) 1121
XapI RAATTY 5 cut(s) 86, 739, 1141, 1505, 1643
XceI RCATGY 1 cut(s) 647
XmiI GTMKAC 1 cut(s) 789
XspI CTAG 2 cut(s) 98, 1448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.