Rw5G005960

U2 snRNP auxiliary factor large subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0008127
Physical Location & Seq
Forward (+)
6172206 .. 6177231
5026 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G005960.1

Sequence Viewer

Length: 1689 bp
ATGGAGCTAAAATACGTAGTGGTATTCCCATACCTCAGATCCAGCTTCTTCTTCTTCATCCGCTCTTCTTCTGGTTTCAGCGAATTTCCAAAACTAGGGTCTGGACCTGAAAATCGAGCAACAATGTCAGACTACGATGGCAGCAAGCACAAGTCTCATGGATCGGAGCGTGAGAGCTCATGGAGAGAGCGAGAGAGGGGTCATGATAGGGAGAGAGACGATGACCGGTATTCGAGAGATGCAAGGGACTACAAGGATAGAAGTGGAAGGTTTGACAGAGGGAGGAACAAGTATAGTGGCTATAGCGGCCGTCGGAATCAGGATTATGACAGGCATCGCGATTATGATCAAGATAGAGATAGGAGGCATAGACATAGGTCGCCTTCGCCTTCAAGGGAAGAAGATAGGGAGAGATCTTCCCGTTCTCGTTCAAAGAGCAAGCGCGCAAGTGGTTTTGACATGGCACCACCTGCTGGGGCAGTGCTACCTACTGCTGCTGCTTCAGGTATTCCACAAACAATGCCGGGAGTAGTACAAAATGTATTACCGTTCGGGACAGCATATCCGACACTTCCCATGATGCCAGCCCAAGCCATGACTCAACAGGCTACAAGGCATGCACGACGGGTATATGTTGGCGGGCTTCCCCCACTGGCCAATGAGCAGACAATTGCCACGTTCTTTAGTCAAGTCATGGCTGCCATTGGAGGGAATTCAGTTGGTCCAGTATCTGAACTGGCAGGTGATGCGGTAGTAAATGTCTACATAAATCATGAGAAGAAGTTTGCATTTGTGGAGATGAGAACGGTCGAAGAAGCGAGTAATGCGATGGCCTTAGATGGGATTATATTTGAGGGGGTTGCTGTGAGGGTACGAAGGCCAACAGACTACAATCCTACATTAGCTGCAGCACTTGGTCCTAACCAACCTAGTCCCCATCTCAACTTGGCTGCTGTGGGGCTCACACAAGGTGCTGTTGGTGGAGCAGAGGGACCTGATCGTATCTTTGTGGGTGGACTACCATACTACTTCACTGAAGCACAGATAAGGGAATTGCTACAATCCTTTGGACCACTTCGTGGATTTGACCTCGTGAAGGATAAAGATACAGGAAATTCTAAAGGATATGGGTTCTGTGTTTATCAGGATCCAGCTGTGACCGACATTGCTTGTGGTGCTCTGAATGGCTTAAAAATGGGCGATAAAACTTTAACCGTCCGGCGTGCTACTGCCAACAGTGTGCAATCTAAATCAGAGCAAGAAAATATCTTGGTACAGGCACAACAGCATATTGCTATGCAGAAAATGGCGATGCAGGTTGTTGACATGAATCGTTTTGGGAATGGGATGGCATCAGTGGTAACTACAGAAATGCCCACAAAAGTCCTTTGTTTGACAGAGGCAATTACTGCTGATCAACTAGGTGACGATGAAGAGTACGTGGAAATATTAGAAGACATGAAGGATGAATGCAGCAAATTTGGAACTCTGTTGAATGTTGTTATTCCCCGTTCTAATCAAGATGGAGAAGAGATCTCAGGTGTTGGAAAGGTGTTCTTGGAATATTCTGATACTGGAAGTTGTGCCAATGCAAAGAACGTACTTGGTGGGAGAAAATTTGGAGGGAACATAGTGAATGCGTATTATTATCCTGAAGACAAATACTATAGCAAAGACTATAGCGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 map03040
Pfam Domains
Protein Families
RRM_1

Protein Analysis

562

Amino Acids

62.2

Weight (kDa)

6.82

Isoelectric Point (pI)

54.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 335 - 404 2e-16 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 478, 731
Acc36I ACCTGC 3 cut(s) 478, 731, 1306
AccB1I GGYRCC 1 cut(s) 463
AccB7I CCANNNNNTGG 2 cut(s) 473, 1079
AccBSI CCGCTC 1 cut(s) 63
AccI GTMKAC 1 cut(s) 762
AccII CGCG 2 cut(s) 339, 444
AciI CCGC 4 cut(s) 61, 306, 639, 749
AclWI GGATC 4 cut(s) 33, 169, 1142, 1155
AcoI YGGCCR 2 cut(s) 307, 654
AcsI RAATTY 5 cut(s) 83, 712, 1114, 1478, 1616
AcuI CTGAAG 3 cut(s) 486, 1056, 1674
AdeI CACNNNGTG 2 cut(s) 971, 1079
AfaI GTAC 5 cut(s) 534, 873, 1275, 1439, 1602
AfiI CCNNNNNNNGG 6 cut(s) 95, 473, 708, 840, 1079, 1096
AgeI ACCGGT 1 cut(s) 225
AgsI TTSAA 3 cut(s) 393, 432, 1495
AluBI AGCT 5 cut(s) 7, 45, 177, 905, 1154
AluI AGCT 5 cut(s) 7, 45, 177, 905, 1154
Alw21I GWGCWC 2 cut(s) 179, 1180
Alw26I GTCTC 2 cut(s) 159, 210
AlwI GGATC 4 cut(s) 33, 169, 1142, 1155
AlwNI CAGNNNCTG 1 cut(s) 731
AoxI GGCC 4 cut(s) 307, 654, 831, 878
ApeKI GCWGC 8 cut(s) 141, 494, 497, 698, 905, 908, 950, 1473
ApoI RAATTY 5 cut(s) 83, 712, 1114, 1478, 1616
ArsI GACNNNNNNTTYG 2 cut(s) 83, 115
AsiGI ACCGGT 1 cut(s) 225
AspLEI GCGC 3 cut(s) 444, 446, 1685
AspS9I GGNCC 5 cut(s) 104, 722, 917, 992, 1070
AsuC2I CCSGG 1 cut(s) 525
AsuHPI GGTGA 2 cut(s) 755, 1436
AvaII GGWCC 5 cut(s) 104, 722, 917, 992, 1070
BalI TGGCCA 1 cut(s) 656
BamHI GGATCC 1 cut(s) 1147
BanI GGYRCC 1 cut(s) 463
BanII GRGCYC 2 cut(s) 179, 963
BauI CACGAG 1 cut(s) 1091
BbsI GAAGAC 2 cut(s) 1461, 1662
Bbv12I GWGCWC 2 cut(s) 179, 1180
BbvI GCAGC 8 cut(s) 153, 481, 484, 685, 892, 920, 937, 1485
BccI CCATC 6 cut(s) 131, 823, 833, 945, 1342, 1517
BceAI ACGGC 1 cut(s) 294
BclI TGATCA 2 cut(s) 346, 1414
BcnI CCSGG 1 cut(s) 525
BcoDI GTCTC 2 cut(s) 159, 210
BfaI CTAG 3 cut(s) 95, 930, 1421
BfmI CTRYAG 5 cut(s) 301, 906, 1365, 1666, 1678
BfuAI ACCTGC 3 cut(s) 478, 731, 1306
BglII AGATCT 2 cut(s) 413, 1533
BisI GCNGC 9 cut(s) 142, 307, 495, 498, 699, 906, 909, 951, 1474
BlsI GCNGC 9 cut(s) 143, 308, 496, 499, 700, 907, 910, 952, 1475
Bme1390I CCNGG 1 cut(s) 525
Bme18I GGWCC 5 cut(s) 104, 722, 917, 992, 1070
BmgT120I GGNCC 5 cut(s) 104, 722, 917, 992, 1070
BmiI GGNNCC 3 cut(s) 465, 993, 1149
BmrFI CCNGG 1 cut(s) 525
BmsI GCATC 6 cut(s) 229, 343, 570, 736, 1302, 1361
BoxI GACNNNNGTC 1 cut(s) 376
BpiI GAAGAC 2 cut(s) 1461, 1662
BpuMI CCSGG 1 cut(s) 525
BsaAI YACGTR 2 cut(s) 16, 1441
BsaBI GATNNNNATC 1 cut(s) 345
BsaWI WCCGGW 1 cut(s) 225
Bsc4I CCNNNNNNNGG 6 cut(s) 95, 473, 708, 840, 1079, 1096
Bse118I RCCGGY 1 cut(s) 225
Bse1I ACTGG 4 cut(s) 657, 725, 741, 1579
Bse3DI GCAATG 1 cut(s) 1164
Bse8I GATNNNNATC 1 cut(s) 345
BseGI GGATG 3 cut(s) 57, 1353, 1471
BseJI GATNNNNATC 1 cut(s) 345
BseLI CCNNNNNNNGG 6 cut(s) 95, 473, 708, 840, 1079, 1096
BseMI GCAATG 1 cut(s) 1164
BseMII CTCAG 2 cut(s) 49, 1551
BseNI ACTGG 4 cut(s) 657, 725, 741, 1579
BsePI GCGCGC 1 cut(s) 442
BseX3I CGGCCG 1 cut(s) 307
BseXI GCAGC 8 cut(s) 153, 481, 484, 685, 892, 920, 937, 1485
BseYI CCCAGC 1 cut(s) 473
Bsh1236I CGCG 2 cut(s) 339, 444
Bsh1285I CGRYCG 2 cut(s) 310, 810
BshFI GGCC 4 cut(s) 309, 656, 833, 880
BshNI GGYRCC 1 cut(s) 463
BshTI ACCGGT 1 cut(s) 225
BsiEI CGRYCG 2 cut(s) 310, 810
BsiHKAI GWGCWC 2 cut(s) 179, 1180
BsiSI CCGG 3 cut(s) 226, 524, 1219
BslFI GGGAC 4 cut(s) 260, 568, 918, 1005
BslI CCNNNNNNNGG 6 cut(s) 95, 473, 708, 840, 1079, 1096
BsmAI GTCTC 2 cut(s) 159, 210
BsmBI CGTCTC 1 cut(s) 210
BsmFI GGGAC 4 cut(s) 260, 568, 918, 1005
BsmI GAATGC 2 cut(s) 1475, 1642
BsnI GGCC 4 cut(s) 309, 656, 833, 880
Bsp1286I GDGCHC 3 cut(s) 179, 963, 1180
Bsp143I GATC 8 cut(s) 38, 161, 346, 413, 997, 1147, 1414, 1533
Bsp68I TCGCGA 1 cut(s) 339
BspACI CCGC 4 cut(s) 61, 306, 639, 749
BspANI GGCC 4 cut(s) 309, 656, 833, 880
BspCNI CTCAG 2 cut(s) 48, 1550
BspFNI CGCG 2 cut(s) 339, 444
BspHI TCATGA 2 cut(s) 202, 772
BspLI GGNNCC 3 cut(s) 465, 993, 1149
BspMAI CTGCAG 1 cut(s) 910
BspMI ACCTGC 3 cut(s) 478, 731, 1306
BspPI GGATC 4 cut(s) 33, 169, 1142, 1155
BspQI GCTCTTC 1 cut(s) 70
BspT107I GGYRCC 1 cut(s) 463
BsrBI CCGCTC 1 cut(s) 63
BsrDI GCAATG 1 cut(s) 1164
BsrFI RCCGGY 1 cut(s) 225
BsrI ACTGG 4 cut(s) 657, 725, 741, 1579
BssAI RCCGGY 1 cut(s) 225
BssHII GCGCGC 1 cut(s) 442
BssMI GATC 8 cut(s) 38, 161, 346, 413, 997, 1147, 1414, 1533
BssSI CACGAG 1 cut(s) 1091
Bst2BI CACGAG 1 cut(s) 1091
Bst4CI ACNGT 4 cut(s) 549, 808, 1216, 1238
Bst6I CTCTTC 3 cut(s) 70, 1428, 1524
BstAPI GCANNNNNTGC 3 cut(s) 470, 746, 1409
BstBAI YACGTR 2 cut(s) 16, 1441
BstC8I GCNNGC 7 cut(s) 146, 440, 444, 585, 618, 641, 1224
BstDEI CTNAG 3 cut(s) 35, 835, 1537
BstENI CCTNNNNNAGG 1 cut(s) 1094
BstF5I GGATG 3 cut(s) 57, 1353, 1471
BstFNI CGCG 2 cut(s) 339, 444
BstHHI GCGC 3 cut(s) 444, 446, 1685
BstKTI GATC 8 cut(s) 41, 164, 349, 416, 1000, 1150, 1417, 1536
BstMAI GTCTC 2 cut(s) 159, 210
BstMBI GATC 8 cut(s) 38, 161, 346, 413, 997, 1147, 1414, 1533
BstMCI CGRYCG 2 cut(s) 310, 810
BstMWI GCNNNNNNNGC 6 cut(s) 306, 470, 746, 824, 1175, 1409
BstNSI RCATGY 1 cut(s) 620
BstPAI GACNNNNGTC 1 cut(s) 376
BstSCI CCNGG 1 cut(s) 523
BstSFI CTRYAG 5 cut(s) 301, 906, 1365, 1666, 1678
BstSNI TACGTA 1 cut(s) 16
BstUI CGCG 2 cut(s) 339, 444
BstV1I GCAGC 8 cut(s) 153, 481, 484, 685, 892, 920, 937, 1485
BstV2I GAAGAC 2 cut(s) 1461, 1662
BstX2I RGATCY 4 cut(s) 38, 413, 1147, 1533
BstYI RGATCY 4 cut(s) 38, 413, 1147, 1533
BstZI CGGCCG 1 cut(s) 307
BsuRI GGCC 4 cut(s) 309, 656, 833, 880
BtgZI GCGATG 3 cut(s) 320, 842, 1325
BtsCI GGATG 3 cut(s) 57, 1353, 1471
BtsI GCAGTG 1 cut(s) 486
BtsIMutI CAGTG 5 cut(s) 486, 650, 1032, 1243, 1362
BtuMI TCGCGA 1 cut(s) 339
BveI ACCTGC 3 cut(s) 478, 731, 1306
Cac8I GCNNGC 7 cut(s) 146, 440, 444, 585, 618, 641, 1224
CaiI CAGNNNCTG 1 cut(s) 731
CciI TCATGA 2 cut(s) 202, 772
CfoI GCGC 3 cut(s) 444, 446, 1685
Cfr10I RCCGGY 1 cut(s) 225
Cfr13I GGNCC 5 cut(s) 104, 722, 917, 992, 1070
Csp6I GTAC 5 cut(s) 533, 872, 1274, 1438, 1601
CspAI ACCGGT 1 cut(s) 225
CspCI CAANNNNNGTGG 2 cut(s) 277, 312
CviQI GTAC 5 cut(s) 533, 872, 1274, 1438, 1601
DdeI CTNAG 3 cut(s) 35, 835, 1537
DpnI GATC 8 cut(s) 40, 163, 348, 415, 999, 1149, 1416, 1535
DpnII GATC 8 cut(s) 38, 161, 346, 413, 997, 1147, 1414, 1533
DraIII CACNNNGTG 2 cut(s) 971, 1079
EaeI YGGCCR 2 cut(s) 307, 654
EagI CGGCCG 1 cut(s) 307
Eam1104I CTCTTC 3 cut(s) 70, 1428, 1524
EarI CTCTTC 3 cut(s) 70, 1428, 1524
Ecl136II GAGCTC 1 cut(s) 177
EclXI CGGCCG 1 cut(s) 307
Eco105I TACGTA 1 cut(s) 16
Eco24I GRGCYC 2 cut(s) 179, 963
Eco47I GGWCC 5 cut(s) 104, 722, 917, 992, 1070
Eco52I CGGCCG 1 cut(s) 307
Eco53kI GAGCTC 1 cut(s) 177
Eco57I CTGAAG 3 cut(s) 486, 1056, 1674
EcoICRI GAGCTC 1 cut(s) 177
EcoNI CCTNNNNNAGG 1 cut(s) 1094
EcoO109I RGGNCCY 1 cut(s) 992
EcoRI GAATTC 1 cut(s) 712
EcoT38I GRGCYC 2 cut(s) 179, 963
Esp3I CGTCTC 1 cut(s) 210
FalI AAGNNNNNCTT 2 cut(s) 1541, 1573
FaqI GGGAC 4 cut(s) 260, 568, 918, 1005
FauI CCCGC 1 cut(s) 632
FbaI TGATCA 2 cut(s) 346, 1414
FblI GTMKAC 1 cut(s) 762
Fnu4HI GCNGC 9 cut(s) 142, 307, 495, 498, 699, 906, 909, 951, 1474
FokI GGATG 3 cut(s) 44, 1360, 1478
FriOI GRGCYC 2 cut(s) 179, 963
Fsp4HI GCNGC 9 cut(s) 142, 307, 495, 498, 699, 906, 909, 951, 1474
FspBI CTAG 3 cut(s) 95, 930, 1421
GlaI GCGC 3 cut(s) 443, 445, 1684
GluI GCNGC 9 cut(s) 142, 307, 495, 498, 699, 906, 909, 951, 1474
GsaI CCCAGC 1 cut(s) 477
HaeIII GGCC 4 cut(s) 309, 656, 833, 880
HapII CCGG 3 cut(s) 226, 524, 1219
HhaI GCGC 3 cut(s) 444, 446, 1685
Hin6I GCGC 3 cut(s) 442, 444, 1683
HinP1I GCGC 3 cut(s) 442, 444, 1683
HincII GTYRAC 1 cut(s) 1324
HindII GTYRAC 1 cut(s) 1324
HinfI GANTC 3 cut(s) 316, 598, 1330
HpaII CCGG 3 cut(s) 226, 524, 1219
HphI GGTGA 2 cut(s) 755, 1436
Hpy166II GTNNAC 3 cut(s) 763, 1016, 1324
Hpy188I TCNGA 9 cut(s) 38, 130, 166, 315, 567, 733, 1182, 1255, 1570
Hpy8I GTNNAC 3 cut(s) 763, 1016, 1324
Hpy99I CGWCG 2 cut(s) 315, 627
HpyAV CCTTC 6 cut(s) 261, 393, 399, 870, 1090, 1456
HpyCH4III ACNGT 4 cut(s) 549, 808, 1216, 1238
HpyCH4IV ACGT 4 cut(s) 15, 677, 1440, 1599
HpyCH4V TGCA 9 cut(s) 242, 620, 788, 908, 1243, 1300, 1315, 1473, 1592
HpyF10VI GCNNNNNNNGC 6 cut(s) 306, 470, 746, 824, 1175, 1409
HpyF3I CTNAG 3 cut(s) 35, 835, 1537
HpySE526I ACGT 4 cut(s) 15, 677, 1440, 1599
HspAI GCGC 3 cut(s) 442, 444, 1683
Ksp22I TGATCA 2 cut(s) 346, 1414
Kzo9I GATC 8 cut(s) 38, 161, 346, 413, 997, 1147, 1414, 1533
LguI GCTCTTC 1 cut(s) 70
LmnI GCTCC 3 cut(s) 4, 166, 983
Lsp1109I GCAGC 8 cut(s) 153, 481, 484, 685, 892, 920, 937, 1485
LweI GCATC 6 cut(s) 229, 343, 570, 736, 1302, 1361
MaeI CTAG 3 cut(s) 95, 930, 1421
MaeII ACGT 4 cut(s) 15, 677, 1440, 1599
MaeIII GTNAC 3 cut(s) 1156, 1360, 1424
MalI GATC 8 cut(s) 40, 163, 348, 415, 999, 1149, 1416, 1535
MbiI CCGCTC 1 cut(s) 63
MboI GATC 8 cut(s) 38, 161, 346, 413, 997, 1147, 1414, 1533
MfeI CAATTG 1 cut(s) 669
MflI RGATCY 4 cut(s) 38, 413, 1147, 1533
MhlI GDGCHC 3 cut(s) 179, 963, 1180
MlsI TGGCCA 1 cut(s) 656
MluCI AATT 8 cut(s) 83, 669, 712, 1052, 1114, 1404, 1478, 1616
MluNI TGGCCA 1 cut(s) 656
MlyI GAGTC 1 cut(s) 592
MmeI TCCRAC 3 cut(s) 293, 590, 1525
Mox20I TGGCCA 1 cut(s) 656
MscI TGGCCA 1 cut(s) 656
MseI TTAA 2 cut(s) 1190, 1211
Msp20I TGGCCA 1 cut(s) 656
MspA1I CMGCKG 1 cut(s) 1154
MspI CCGG 3 cut(s) 226, 524, 1219
MspR9I CCNGG 1 cut(s) 525
MunI CAATTG 1 cut(s) 669
Mva1269I GAATGC 2 cut(s) 1475, 1642
MvnI CGCG 2 cut(s) 339, 444
MwoI GCNNNNNNNGC 6 cut(s) 306, 470, 746, 824, 1175, 1409
NciI CCSGG 1 cut(s) 525
NdeII GATC 8 cut(s) 38, 161, 346, 413, 997, 1147, 1414, 1533
NlaIV GGNNCC 3 cut(s) 465, 993, 1149
NmuCI GTSAC 2 cut(s) 1156, 1424
NruI TCGCGA 1 cut(s) 339
NspI RCATGY 1 cut(s) 620
PaeI GCATGC 1 cut(s) 620
PagI TCATGA 2 cut(s) 202, 772
PaqCI CACCTGC 2 cut(s) 478, 731
PauI GCGCGC 1 cut(s) 442
PciSI GCTCTTC 1 cut(s) 70
PctI GAATGC 2 cut(s) 1475, 1642
PfeI GAWTC 2 cut(s) 316, 1330
PflMI CCANNNNNTGG 2 cut(s) 473, 1079
PinAI ACCGGT 1 cut(s) 225
PkrI GCNGC 9 cut(s) 143, 308, 496, 499, 700, 907, 910, 952, 1475
PleI GAGTC 1 cut(s) 592
PpsI GAGTC 1 cut(s) 592
Ppu21I YACGTR 2 cut(s) 16, 1441
PpuMI RGGWCCY 1 cut(s) 992
PshAI GACNNNNGTC 1 cut(s) 376
Psp124BI GAGCTC 1 cut(s) 179
Psp5II RGGWCCY 1 cut(s) 992
PspFI CCCAGC 1 cut(s) 473
PspN4I GGNNCC 3 cut(s) 465, 993, 1149
PspPI GGNCC 5 cut(s) 104, 722, 917, 992, 1070
PspPPI RGGWCCY 1 cut(s) 992
PstI CTGCAG 1 cut(s) 910
PstNI CAGNNNCTG 1 cut(s) 731
PsuI RGATCY 4 cut(s) 38, 413, 1147, 1533
PteI GCGCGC 1 cut(s) 442
PvuII CAGCTG 1 cut(s) 1154
RruI TCGCGA 1 cut(s) 339
RsaI GTAC 5 cut(s) 534, 873, 1275, 1439, 1602
RsaNI GTAC 5 cut(s) 533, 872, 1274, 1438, 1601
SacI GAGCTC 1 cut(s) 179
SapI GCTCTTC 1 cut(s) 70
SaqAI TTAA 2 cut(s) 1190, 1211
SatI GCNGC 9 cut(s) 142, 307, 495, 498, 699, 906, 909, 951, 1474
Sau3AI GATC 8 cut(s) 38, 161, 346, 413, 997, 1147, 1414, 1533
Sau96I GGNCC 5 cut(s) 104, 722, 917, 992, 1070
SchI GAGTC 1 cut(s) 592
ScrFI CCNGG 1 cut(s) 525
SduI GDGCHC 3 cut(s) 179, 963, 1180
SfaNI GCATC 6 cut(s) 229, 343, 570, 736, 1302, 1361
SfcI CTRYAG 5 cut(s) 301, 906, 1365, 1666, 1678
SinI GGWCC 5 cut(s) 104, 722, 917, 992, 1070
SnaBI TACGTA 1 cut(s) 16
SphI GCATGC 1 cut(s) 620
Sse9I AATT 8 cut(s) 83, 669, 712, 1052, 1114, 1404, 1478, 1616
SsiI CCGC 4 cut(s) 61, 306, 639, 749
SspI AATATT 2 cut(s) 1449, 1565
SspMI CTAG 3 cut(s) 95, 930, 1421
SstI GAGCTC 1 cut(s) 179
StyD4I CCNGG 1 cut(s) 523
TaaI ACNGT 4 cut(s) 549, 808, 1216, 1238
TaiI ACGT 4 cut(s) 18, 680, 1443, 1602
TaqI TCGA 3 cut(s) 115, 233, 810
TaqII GACCGA 1 cut(s) 1175
TasI AATT 8 cut(s) 83, 669, 712, 1052, 1114, 1404, 1478, 1616
TatI WGTACW 1 cut(s) 532
TauI GCSGC 1 cut(s) 309
TfiI GAWTC 2 cut(s) 316, 1330
Tru1I TTAA 2 cut(s) 1190, 1211
Tru9I TTAA 2 cut(s) 1190, 1211
TscAI CASTG 5 cut(s) 486, 657, 1039, 1243, 1362
TseFI GTSAC 2 cut(s) 1156, 1424
TseI GCWGC 8 cut(s) 141, 494, 497, 698, 905, 908, 950, 1473
Tsp45I GTSAC 2 cut(s) 1156, 1424
TspDTI ATGAA 5 cut(s) 46, 1343, 1446, 1475, 1482
TspRI CASTG 5 cut(s) 486, 657, 1039, 1243, 1362
Van91I CCANNNNNTGG 2 cut(s) 473, 1079
VpaK11BI GGWCC 5 cut(s) 104, 722, 917, 992, 1070
XagI CCTNNNNNAGG 1 cut(s) 1094
XapI RAATTY 5 cut(s) 83, 712, 1114, 1478, 1616
XceI RCATGY 1 cut(s) 620
XmiI GTMKAC 1 cut(s) 762
XspI CTAG 3 cut(s) 95, 930, 1421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.