Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0008670

Physical Location & Seq

Genomic Coordinates Reverse (-)

10601214 .. 10608875

Gene Structure 7662 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1117100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGTCGGGTTTACTTAATTCTTCTCTAAACGGATCAGCCTCAAATCTCCCAGACAGTAGTGGGCGATTTGCATCATCTTTCTCTGGTCAATCTGGTGCAGCTTCTCCCGTTTTTCATCACTCAGGAAGTATGCAGGGATTGCATAATATTCATGGGAGCTTCAATGTTCCCAACATGCCGGGTACATTAACATCAAGAAACTCAACAATAAATAATGTTCCTTCTGGTGGAGTCCAACAACCAGCTGGAAGCCTCTCTGGCGGACGATTCACATCAAATAACCTTCCTGTTGCTTTGTCTCAGTTATCTCATGGAAGCTCCCATGCACATTCAGGAGTCACTAATAGAGGAGGTATAAGTGTAGTAGGAAACCCTGGATTTAGTAGTAGCACAAATGGAATTGGCGGTTCTATTCCTGGGATTCTCCCTACATCTGCTGCAATTGGTAACCGGAGTGCTGTTTCAGGATTGGGTGTGTCCCCAATTTTGGGAAATGCAGGTCCTCGGATTACAAGTTCCATGGGAAACATGGTTGGTGGGGGAAACATTGGGAGGAGTATTAGCACTGGTGGAGGCTTGTCGGTGCCTGGTCTTGCTTCTCGTCTGAATTTAAGCGGAAATGGTGGATCTGGAAGTTTAACTGTACAAGGGCAAAATCGCTTGATGAGTGGTGTGCTACCACAAGGGTCTCCGCAAGTAATTTCGATGCTAGGAAACTCTTACCCTAATGCTGGTGGTCCACTTTCTCAAAGCCATGTCCAAGTGAATAATTTGAGCTCGATGGGAATAATGAATGATGTGAATTCTAATGACAGTTCTCCTTTTGACATCAACGATTTCCCTTCATTAACAAGTCGTCCCAGTTCTGCGGGAGGGCCTCAGGGGCAGTTGGGTTCACTACGAAAACAAGGCCTTGGTGTTAGTCCTATTGTTCAACAGAACCAAGAGTTCAGCATCCAAAATGAGGACTTTCCAGCTTTACCGGGATTTAAAGGTGGTGATGCTGAATATGGGATCAATATGCACCAGAAAGAACAACTCCATGACAATGCTGTGTCGATGATGCAATCTCAGCACTTCCCAATGGGACGGTCCTCAGGATTTAACTTGGGGGGAACTTATTCTTCTCATAGGCCACAACAGCAACAACATGCTCCATCAGTCAGCAGTAGTGGTGTCTCGTTTTCACAAGTAAACAATCAGGATCTTCTCCATATGCATGGTTCAGACATATTCCCATCATCACATTCAACATATCATTCACAGACTAGTGGAGGACCTCCTGGCATTGGATTAAGACCTCTGAATTCTGCCAATTCAGTTTCTGGCATGGGTTCATATGACCAGCTTATTCAGCAGTATCAACAACAAAATCAATCCCAGTTTCGCCTGCACCAGATGTCAGCTGGCAATCAATCATATAGGGATCAGGGAATGAAATCGATGCAGTCAGCGCAATCTGCTCCAGACCTATTTGGTTTGCTTGGATTGTTAAGTGTCATAAGGATGAGTGATCCTGATCTTACATCTCTTGCACTTGGAATTGATTTGACAACGCTTGGATTAAACTTGAATTCAACAGAAAACCTTCACAAGACTTTTGGTTCCCCATGGTCTGACGAGCCGGCTAAGGGTGATCCAGAGTTTAGTGTTCCGCAATGTTACTATGCTAAACAACCGCCTGTACTACATCAAGGGTATTTTTCAAAGTTTTCTGTGGAAACGTTGTTCTATATCTTTTACAGCATGCCCAAAGACGAGGCCCAATTATATGCTGCCAATGAACTAAATAATAGAGGCTGGTTTTATCACAAGGAACACCGCCTATGGTTCATAAGAGTACCCAACATGGAACCACTTGTGAAGACCAACACGTGTGAGAGAGGATCTTATCACTGCTTTGATCCCAATACCTTTGAAACTATCCGAAAGGATAATTTTATTGTGCATTACGAGTTGTTGGAGAAGAGACCGGTGTTACCACAGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000932 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006355 GO:0006401 GO:0006402 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0015074 GO:0016070 GO:0016071 GO:0017148 GO:0019219 GO:0019222 GO:0019439 GO:0030014 GO:0030015 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032268 GO:0032269 GO:0032991 GO:0034248 GO:0034249 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1903506 GO:1990904 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

NOT2_3_5

Protein Analysis

664

Amino Acids

70.31

Weight (kDa)

7.14

Isoelectric Point (pI)

54.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NOT2_3_5_C	PF04153	531 - 654	2.9e-40	NOT2/NOT3/NOT5 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008670)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07705 AT1G07705
fragaria_vesca	FvH4_3g34620 FvH4_3g34620 FvH4_3g34620
malus_domestica	MD03G1103300.v1.1 MD11G1117100.v1.1
prunus_persica	Prupe.6G087300_v2.0.a1
pyrus_communis	pycom03g08390 pycom11g09830
rosa_chinensis	RchiOBHm_Chr5g0062331
rosa_laevigata	RLG00000035550
rosa_multiflora	Rmu_sc0006295.1_g000002 Rmu_ssc0000409.1_g000034
rosa_roxburghii	Rroxscaffold_1G00018350
rosa_rugosa	Rorug05G0348500 Rorug05G0348600 Rorug05G0348700
rosa_samantha	Rh5AG408400 Rh5BG422100 Rh5CG446100 Rh5DG437100
rosa_wichuraiana	Rw5G038480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	488
AccB1I	GGYRCC	1 cut(s)	583
AciI	CCGC	8 cut(s)	261, 405, 615, 692, 869, 1655, 1679, 1822
AclI	AACGTT	1 cut(s)	1724
AclWI	GGATC	9 cut(s)	40, 634, 1022, 1212, 1434, 1508, 1631, 1894, 1898
AcsI	RAATTY	4 cut(s)	607, 802, 1306, 1573
AcvI	CACGTG	1 cut(s)	1875
AfaI	GTAC	4 cut(s)	184, 645, 1686, 1842
AfiI	CCNNNNNNNGG	7 cut(s)	227, 487, 488, 731, 964, 1289, 1631
AflIII	ACRYGT	2 cut(s)	1872, 1874
AgeI	ACCGGT	1 cut(s)	1972
AgsI	TTSAA	7 cut(s)	163, 935, 1251, 1573, 1578, 1707, 1919
AhlI	ACTAGT	1 cut(s)	1268
AjnI	CCWGG	4 cut(s)	373, 415, 586, 1282
AloI	GAACNNNNNNTCC	4 cut(s)	499, 531, 1712, 1744
AluBI	AGCT	8 cut(s)	101, 159, 245, 318, 777, 977, 1348, 1406
AluI	AGCT	8 cut(s)	101, 159, 245, 318, 777, 977, 1348, 1406
Alw21I	GWGCWC	1 cut(s)	779
Alw26I	GTCTC	4 cut(s)	303, 693, 1183, 1963
AlwI	GGATC	9 cut(s)	40, 634, 1022, 1212, 1434, 1508, 1631, 1894, 1898
AlwNI	CAGNNNCTG	1 cut(s)	1325
AoxI	GGCC	4 cut(s)	875, 910, 1133, 1761
ApeKI	GCWGC	3 cut(s)	98, 437, 1775
ApoI	RAATTY	4 cut(s)	607, 802, 1306, 1573
AsiGI	ACCGGT	1 cut(s)	1972
Asp700I	GAANNNNTTC	2 cut(s)	1120, 1587
AspLEI	GCGC	1 cut(s)	1456
AspS9I	GGNCC	6 cut(s)	500, 737, 875, 1092, 1277, 1762
AsuC2I	CCSGG	2 cut(s)	180, 984
AsuHPI	GGTGA	2 cut(s)	1010, 1646
AvaII	GGWCC	4 cut(s)	500, 737, 1092, 1277
AxyI	CCTNAGG	2 cut(s)	879, 1096
BanI	GGYRCC	1 cut(s)	583
BanII	GRGCYC	1 cut(s)	779
BbrPI	CACGTG	1 cut(s)	1875
BbsI	GAAGAC	1 cut(s)	1871
Bbv12I	GWGCWC	1 cut(s)	779
BbvI	GCAGC	3 cut(s)	110, 424, 1762
BccI	CCATC	3 cut(s)	775, 1165, 1246
BciT130I	CCWGG	4 cut(s)	375, 417, 588, 1284
BcnI	CCSGG	2 cut(s)	180, 984
BcoDI	GTCTC	4 cut(s)	303, 693, 1183, 1963
BcuI	ACTAGT	1 cut(s)	1268
BfaI	CTAG	2 cut(s)	710, 1269
BfuAI	ACCTGC	1 cut(s)	488
BglI	GCCNNNNNGGC	2 cut(s)	258, 883
BisI	GCNGC	3 cut(s)	99, 438, 1776
BlsI	GCNGC	3 cut(s)	100, 439, 1777
Bme1390I	CCNGG	6 cut(s)	180, 375, 417, 588, 984, 1284
Bme18I	GGWCC	4 cut(s)	500, 737, 1092, 1277
BmgT120I	GGNCC	6 cut(s)	500, 737, 875, 1092, 1277, 1762
BmiI	GGNNCC	3 cut(s)	585, 1606, 1854
BmrFI	CCNGG	6 cut(s)	180, 375, 417, 588, 984, 1284
BmrI	ACTGGG	2 cut(s)	855, 1375
BmsI	GCATC	6 cut(s)	80, 696, 963, 991, 1053, 1434
BmuI	ACTGGG	2 cut(s)	855, 1375
BpiI	GAAGAC	1 cut(s)	1871
BpmI	CTGGAG	1 cut(s)	1449
Bpu10I	CCTNAGC	1 cut(s)	1629
BpuMI	CCSGG	2 cut(s)	180, 984
Bsa29I	ATCGAT	1 cut(s)	1442
BsaAI	YACGTR	1 cut(s)	1875
BsaBI	GATNNNNATC	3 cut(s)	70, 271, 1518
BsaI	GGTCTC	2 cut(s)	693, 1963
BsaJI	CCNNGG	6 cut(s)	373, 416, 503, 519, 913, 1610
BsaWI	WCCGGW	2 cut(s)	450, 1972
Bsc4I	CCNNNNNNNGG	7 cut(s)	227, 487, 488, 731, 964, 1289, 1631
Bse118I	RCCGGY	2 cut(s)	1624, 1972
Bse1I	ACTGG	3 cut(s)	571, 861, 1381
Bse21I	CCTNAGG	2 cut(s)	879, 1096
Bse3DI	GCAATG	1 cut(s)	1664
Bse8I	GATNNNNATC	3 cut(s)	70, 271, 1518
BseBI	CCWGG	4 cut(s)	375, 417, 588, 1284
BseCI	ATCGAT	1 cut(s)	1442
BseDI	CCNNGG	6 cut(s)	373, 416, 503, 519, 913, 1610
BseGI	GGATG	2 cut(s)	954, 1512
BseJI	GATNNNNATC	3 cut(s)	70, 271, 1518
BseLI	CCNNNNNNNGG	7 cut(s)	227, 487, 488, 731, 964, 1289, 1631
BseMI	GCAATG	1 cut(s)	1664
BseMII	CTCAG	5 cut(s)	135, 314, 893, 1085, 1110
BseNI	ACTGG	3 cut(s)	571, 861, 1381
BseRI	GAGGAG	2 cut(s)	363, 568
BseXI	GCAGC	3 cut(s)	110, 424, 1762
BsgI	GTGCAG	2 cut(s)	117, 1376
BshFI	GGCC	4 cut(s)	877, 912, 1135, 1763
BshNI	GGYRCC	1 cut(s)	583
BshTI	ACCGGT	1 cut(s)	1972
BshVI	ATCGAT	1 cut(s)	1442
BsiHKAI	GWGCWC	1 cut(s)	779
BsiSI	CCGG	5 cut(s)	179, 451, 983, 1625, 1973
BslFI	GGGAC	3 cut(s)	463, 843, 1101
BslI	CCNNNNNNNGG	7 cut(s)	227, 487, 488, 731, 964, 1289, 1631
BsmAI	GTCTC	4 cut(s)	303, 693, 1183, 1963
BsmFI	GGGAC	3 cut(s)	463, 843, 1101
BsnI	GGCC	4 cut(s)	877, 912, 1135, 1763
Bso31I	GGTCTC	2 cut(s)	693, 1963
Bsp1286I	GDGCHC	1 cut(s)	779
Bsp1407I	TGTACA	1 cut(s)	643
Bsp19I	CCATGG	2 cut(s)	519, 1610
BspACI	CCGC	8 cut(s)	261, 405, 615, 692, 869, 1655, 1679, 1822
BspANI	GGCC	4 cut(s)	877, 912, 1135, 1763
BspCNI	CTCAG	5 cut(s)	134, 313, 892, 1084, 1109
BspDI	ATCGAT	1 cut(s)	1442
BspLI	GGNNCC	3 cut(s)	585, 1606, 1854
BspMI	ACCTGC	1 cut(s)	488
BspPI	GGATC	9 cut(s)	40, 634, 1022, 1212, 1434, 1508, 1631, 1894, 1898
BspT107I	GGYRCC	1 cut(s)	583
BspTNI	GGTCTC	2 cut(s)	693, 1963
BsrDI	GCAATG	1 cut(s)	1664
BsrFI	RCCGGY	2 cut(s)	1624, 1972
BsrGI	TGTACA	1 cut(s)	643
BsrI	ACTGG	3 cut(s)	571, 861, 1381
BssAI	RCCGGY	2 cut(s)	1624, 1972
BssECI	CCNNGG	6 cut(s)	373, 416, 503, 519, 913, 1610
BssT1I	CCWWGG	3 cut(s)	519, 913, 1610
Bst2UI	CCWGG	4 cut(s)	375, 417, 588, 1284
Bst4CI	ACNGT	4 cut(s)	56, 643, 815, 1092
Bst6I	CTCTTC	1 cut(s)	1961
BstAPI	GCANNNNNTGC	1 cut(s)	139
BstAUI	TGTACA	1 cut(s)	643
BstBAI	YACGTR	1 cut(s)	1875
BstC8I	GCNNGC	4 cut(s)	1391, 1408, 1626, 1748
BstDEI	CTNAG	6 cut(s)	121, 300, 879, 1071, 1096, 1629
BstDSI	CCRYGG	2 cut(s)	519, 1610
BstEII	GGTNACC	1 cut(s)	446
BstF5I	GGATG	2 cut(s)	954, 1512
BstHHI	GCGC	1 cut(s)	1456
BstMAI	GTCTC	4 cut(s)	303, 693, 1183, 1963
BstMWI	GCNNNNNNNGC	8 cut(s)	139, 258, 883, 1072, 1141, 1354, 1453, 1460
BstNI	CCWGG	4 cut(s)	375, 417, 588, 1284
BstNSI	RCATGY	3 cut(s)	178, 1154, 1750
BstPI	GGTNACC	1 cut(s)	446
BstSCI	CCNGG	6 cut(s)	178, 373, 415, 586, 982, 1282
BstV1I	GCAGC	3 cut(s)	110, 424, 1762
BstV2I	GAAGAC	1 cut(s)	1871
BstX2I	RGATCY	3 cut(s)	626, 1204, 1886
BstXI	CCANNNNNNTGG	1 cut(s)	1220
BstYI	RGATCY	3 cut(s)	626, 1204, 1886
Bsu15I	ATCGAT	1 cut(s)	1442
Bsu36I	CCTNAGG	2 cut(s)	879, 1096
BsuRI	GGCC	4 cut(s)	877, 912, 1135, 1763
BsuTUI	ATCGAT	1 cut(s)	1442
BtgI	CCRYGG	2 cut(s)	519, 1610
BtsCI	GGATG	2 cut(s)	954, 1512
BtsI	GCAGTG	1 cut(s)	1894
BtsIMutI	CAGTG	2 cut(s)	564, 1894
BveI	ACCTGC	1 cut(s)	488
Cac8I	GCNNGC	4 cut(s)	1391, 1408, 1626, 1748
CaiI	CAGNNNCTG	1 cut(s)	1325
CfoI	GCGC	1 cut(s)	1456
Cfr10I	RCCGGY	2 cut(s)	1624, 1972
Cfr13I	GGNCC	6 cut(s)	500, 737, 875, 1092, 1277, 1762
ClaI	ATCGAT	1 cut(s)	1442
Csp6I	GTAC	4 cut(s)	183, 644, 1685, 1841
CspAI	ACCGGT	1 cut(s)	1972
CviQI	GTAC	4 cut(s)	183, 644, 1685, 1841
DdeI	CTNAG	6 cut(s)	121, 300, 879, 1071, 1096, 1629
DraI	TTTAAA	1 cut(s)	991
Eam1104I	CTCTTC	1 cut(s)	1961
EarI	CTCTTC	1 cut(s)	1961
EciI	GGCGGA	1 cut(s)	276
Ecl136II	GAGCTC	1 cut(s)	777
Eco130I	CCWWGG	3 cut(s)	519, 913, 1610
Eco147I	AGGCCT	1 cut(s)	912
Eco24I	GRGCYC	1 cut(s)	779
Eco31I	GGTCTC	2 cut(s)	693, 1963
Eco47I	GGWCC	4 cut(s)	500, 737, 1092, 1277
Eco53kI	GAGCTC	1 cut(s)	777
Eco72I	CACGTG	1 cut(s)	1875
Eco81I	CCTNAGG	2 cut(s)	879, 1096
Eco91I	GGTNACC	1 cut(s)	446
EcoICRI	GAGCTC	1 cut(s)	777
EcoO109I	RGGNCCY	3 cut(s)	500, 875, 1277
EcoO65I	GGTNACC	1 cut(s)	446
EcoRI	GAATTC	3 cut(s)	802, 1306, 1573
EcoRII	CCWGG	4 cut(s)	373, 415, 586, 1282
EcoT14I	CCWWGG	3 cut(s)	519, 913, 1610
EcoT22I	ATGCAT	1 cut(s)	1221
EcoT38I	GRGCYC	1 cut(s)	779
ErhI	CCWWGG	3 cut(s)	519, 913, 1610
FaqI	GGGAC	3 cut(s)	463, 843, 1101
FauI	CCCGC	1 cut(s)	862
FauNDI	CATATG	2 cut(s)	1215, 1339
Fnu4HI	GCNGC	3 cut(s)	99, 438, 1776
FokI	GGATG	2 cut(s)	941, 1519
FriOI	GRGCYC	1 cut(s)	779
Fsp4HI	GCNGC	3 cut(s)	99, 438, 1776
FspBI	CTAG	2 cut(s)	710, 1269
GlaI	GCGC	1 cut(s)	1455
GluI	GCNGC	3 cut(s)	99, 438, 1776
GsuI	CTGGAG	1 cut(s)	1449
HaeIII	GGCC	4 cut(s)	877, 912, 1135, 1763
HapII	CCGG	5 cut(s)	179, 451, 983, 1625, 1973
HhaI	GCGC	1 cut(s)	1456
Hin6I	GCGC	1 cut(s)	1454
HinP1I	GCGC	1 cut(s)	1454
HinfI	GANTC	4 cut(s)	231, 267, 336, 421
HpaII	CCGG	5 cut(s)	179, 451, 983, 1625, 1973
HphI	GGTGA	2 cut(s)	1010, 1646
Hpy166II	GTNNAC	4 cut(s)	11, 740, 896, 1195
Hpy188I	TCNGA	6 cut(s)	507, 606, 1228, 1305, 1618, 1928
Hpy8I	GTNNAC	4 cut(s)	11, 740, 896, 1195
HpyAV	CCTTC	4 cut(s)	231, 293, 852, 1598
HpyCH4III	ACNGT	4 cut(s)	56, 643, 815, 1092
HpyCH4IV	ACGT	2 cut(s)	1724, 1874
HpyF10VI	GCNNNNNNNGC	8 cut(s)	139, 258, 883, 1072, 1141, 1354, 1453, 1460
HpyF3I	CTNAG	6 cut(s)	121, 300, 879, 1071, 1096, 1629
HpySE526I	ACGT	2 cut(s)	1724, 1874
HspAI	GCGC	1 cut(s)	1454
KroI	GCCGGC	1 cut(s)	1624
KroNI	GCCGGC	1 cut(s)	1626
LmnI	GCTCC	4 cut(s)	156, 323, 1159, 1468
Lsp1109I	GCAGC	3 cut(s)	110, 424, 1762
LweI	GCATC	6 cut(s)	80, 696, 963, 991, 1053, 1434
MaeI	CTAG	2 cut(s)	710, 1269
MaeII	ACGT	2 cut(s)	1724, 1874
MaeIII	GTNAC	4 cut(s)	337, 446, 1661, 1977
MboII	GAAGA	5 cut(s)	12, 1116, 1199, 1876, 1978
MfeI	CAATTG	1 cut(s)	441
MflI	RGATCY	3 cut(s)	626, 1204, 1886
MhlI	GDGCHC	1 cut(s)	779
MlyI	GAGTC	2 cut(s)	240, 345
MmeI	TCCRAC	2 cut(s)	259, 1941
Mph1103I	ATGCAT	1 cut(s)	1221
MroNI	GCCGGC	1 cut(s)	1624
MroXI	GAANNNNTTC	2 cut(s)	1120, 1587
MslI	CAYNNNNRTG	3 cut(s)	1047, 1218, 1505
MspA1I	CMGCKG	2 cut(s)	245, 1406
MspI	CCGG	5 cut(s)	179, 451, 983, 1625, 1973
MspR9I	CCNGG	6 cut(s)	180, 375, 417, 588, 984, 1284
MunI	CAATTG	1 cut(s)	441
MvaI	CCWGG	4 cut(s)	375, 417, 588, 1284
MwoI	GCNNNNNNNGC	8 cut(s)	139, 258, 883, 1072, 1141, 1354, 1453, 1460
NaeI	GCCGGC	1 cut(s)	1626
NciI	CCSGG	2 cut(s)	180, 984
NcoI	CCATGG	2 cut(s)	519, 1610
NdeI	CATATG	2 cut(s)	1215, 1339
NgoMIV	GCCGGC	1 cut(s)	1624
NlaIV	GGNNCC	3 cut(s)	585, 1606, 1854
NmuCI	GTSAC	1 cut(s)	337
NsiI	ATGCAT	1 cut(s)	1221
NspI	RCATGY	3 cut(s)	178, 1154, 1750
PaeI	GCATGC	1 cut(s)	1750
PceI	AGGCCT	1 cut(s)	912
PdiI	GCCGGC	1 cut(s)	1626
PdmI	GAANNNNTTC	2 cut(s)	1120, 1587
PfeI	GAWTC	2 cut(s)	267, 421
PinAI	ACCGGT	1 cut(s)	1972
PkrI	GCNGC	3 cut(s)	100, 439, 1777
PleI	GAGTC	2 cut(s)	239, 344
PmaCI	CACGTG	1 cut(s)	1875
PmlI	CACGTG	1 cut(s)	1875
PpsI	GAGTC	2 cut(s)	239, 344
Ppu21I	YACGTR	1 cut(s)	1875
PpuMI	RGGWCCY	2 cut(s)	500, 1277
Psp124BI	GAGCTC	1 cut(s)	779
Psp1406I	AACGTT	1 cut(s)	1724
Psp5II	RGGWCCY	2 cut(s)	500, 1277
Psp6I	CCWGG	4 cut(s)	373, 415, 586, 1282
PspCI	CACGTG	1 cut(s)	1875
PspEI	GGTNACC	1 cut(s)	446
PspGI	CCWGG	4 cut(s)	373, 415, 586, 1282
PspN4I	GGNNCC	3 cut(s)	585, 1606, 1854
PspPI	GGNCC	6 cut(s)	500, 737, 875, 1092, 1277, 1762
PspPPI	RGGWCCY	2 cut(s)	500, 1277
PstNI	CAGNNNCTG	1 cut(s)	1325
PsuI	RGATCY	3 cut(s)	626, 1204, 1886
PvuII	CAGCTG	2 cut(s)	245, 1406
RsaI	GTAC	4 cut(s)	184, 645, 1686, 1842
RsaNI	GTAC	4 cut(s)	183, 644, 1685, 1841
RseI	CAYNNNNRTG	3 cut(s)	1047, 1218, 1505
SacI	GAGCTC	1 cut(s)	779
SatI	GCNGC	3 cut(s)	99, 438, 1776
Sau96I	GGNCC	6 cut(s)	500, 737, 875, 1092, 1277, 1762
SchI	GAGTC	2 cut(s)	240, 345
ScrFI	CCNGG	6 cut(s)	180, 375, 417, 588, 984, 1284
SduI	GDGCHC	1 cut(s)	779
SfaNI	GCATC	6 cut(s)	80, 696, 963, 991, 1053, 1434
SinI	GGWCC	4 cut(s)	500, 737, 1092, 1277
SmiMI	CAYNNNNRTG	3 cut(s)	1047, 1218, 1505
SpeI	ACTAGT	1 cut(s)	1268
SphI	GCATGC	1 cut(s)	1750
SseBI	AGGCCT	1 cut(s)	912
SsiI	CCGC	8 cut(s)	261, 405, 615, 692, 869, 1655, 1679, 1822
SspI	AATATT	1 cut(s)	148
SspMI	CTAG	2 cut(s)	710, 1269
SstI	GAGCTC	1 cut(s)	779
StuI	AGGCCT	1 cut(s)	912
StyD4I	CCNGG	6 cut(s)	178, 373, 415, 586, 982, 1282
StyI	CCWWGG	3 cut(s)	519, 913, 1610
TaaI	ACNGT	4 cut(s)	56, 643, 815, 1092
TaiI	ACGT	2 cut(s)	1727, 1877
TaqI	TCGA	4 cut(s)	704, 779, 1058, 1442
TatI	WGTACW	2 cut(s)	643, 1684
TfiI	GAWTC	2 cut(s)	267, 421
TscAI	CASTG	2 cut(s)	571, 1901
TseFI	GTSAC	1 cut(s)	337
TseI	GCWGC	3 cut(s)	98, 437, 1775
Tsp45I	GTSAC	1 cut(s)	337
TspDTI	ATGAA	8 cut(s)	104, 140, 806, 834, 1326, 1451, 1797, 1822
TspGWI	ACGGA	1 cut(s)	45
TspRI	CASTG	2 cut(s)	571, 1901
VpaK11BI	GGWCC	4 cut(s)	500, 737, 1092, 1277
XapI	RAATTY	4 cut(s)	607, 802, 1306, 1573
XceI	RCATGY	3 cut(s)	178, 1154, 1750
XcmI	CCANNNNNNNNNTGG	3 cut(s)	242, 526, 1403
XmnI	GAANNNNTTC	2 cut(s)	1120, 1587
XspI	CTAG	2 cut(s)	710, 1269
Zsp2I	ATGCAT	1 cut(s)	1221

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.