Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0008670

Physical Location & Seq

Genomic Coordinates Reverse (-)

43231091 .. 43233835

Gene Structure 2745 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0348700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

ATGGCTGCTCAGATACTAGAATCTGAAGCTCCAACCCAGAATGCCACTCCTGAGGTTAATCGACGTTCAGCTAATTTTTCTCCTAGCATTTGGGGTGATCATTTTCTCTCATATGCTTCTAAGGAAAGCAATATTGAAACTGAGCAACATCTCCATGAATTCAAGGCAGAAGTGAAGACGATGCTGAAGGCTCCGGTTGAAAAGCTTTCACAAAAGTTGGATTTGATTGATGACATTCAGCGCTTGGGAGTTTTCAGCCATTTTGAAAATGAAATCCACGAAATTTTACAGCAAATTCACAACAATTCTTACGTCAACTGTGACGACCTAGAGAGCGATGATGAGCTCTACATTGTGGCGCTCCGTTTTCGATTACTCAGACAACAGGGTTATAAAGTTTCATGCAACGTGTTTAGGAAGTTCATGGACAAGGATGGAAACTTCAAGGAATCACTTATTGAAGATGTCCCGGGACTATTAAGTTTGTATGAAGCCACACATCTTAGGACACACGGAGAAGAACTGCTTGATGATGCATTGGCCTTCACCTCCACTCATCTTGAGTCGGCAACTCGCCATAGTTTAAACCCCCTGGTTATGAAGCGAGTAACTCATGCCTTGTATCAGCCTCTCTGGAAGGGTGTAACTAGACTCGAAGCCAGACATCACTTGTCTGCTTACCCGGATCACAATTCACATAATGAAACACTCTCGAATTTTGCAAAGTTGGATTTCAATCTACTGCAGCAAGTCCATCAGAAAGAACTAAGTGATATTGCAAGGTGGTGGAAGGACTTGGACTTTGCAAACAAGCTGCCGTTTGCAAGAGACCGAGTGGTTGAGTGCTACTTCTGGACTTTGGGAGTCTACTTTGAGCCCCAATATCACTTTGGTAGGAAGACGTTTTGCAAAGTTATTGCCATGACATCCATTATTGACGACATTTATGACGTGTATGGCACGCTTGAAGAAGCAGAACTATTTACTGAAGCTATTGAGAGATGGGATATCTCTGCCATGGATATACTGCCCGAGTATATGAAAATCTGTTACCAAGCACTGTTGGGTGTCTATCGTGAAATGGAAGAAAAGCTTGCAATTGAGGGCAACTTATATGTCATTCACTACGCGAGAGAATCAATGAAAATCCAGGTTAGAGCTTACTTTCGAGAAGCCAAATGGTTCCACCAGAAATACACGCCAACCTTTGATGAATATATGTCATTAGCACTTGTTACATCTGGCTACTTTATGCTAGCAACCATATCCTTTCTGGGAATGGGGGATATTGTCACAAGAGGCTCCTTTGAGTGGTTATTCAATAGTCCTAAAATTGTCAAGGCTTCAGAGTTAGTTGGTAGACTCATGGATGACATGGCTTCTCATAAGTTTGAGCAAAAGAGAGGACATGTCGCCTCAGCTGTGGAATGCTACATGAAAGAATATGGTGTCACAGAAGAAGAAGCAAAAGTCGCACTAACTAAACAAGTGGATGATGCTTGGAAGGACATAAATGAAGAATTGCTGAAGATTAACACTATTCCAAGGCCCCTCCTATTGCGAGTTCTCAATCTCTCGCGGGTGATTGAAGTTGTATACAAGAATGAAGATGGGTATACTCATGCAGGTGGTGTGCTCAAGGGTTTTGTGGCTTCTGTGCTTATCAAACCTGTGCCTATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000288 GO:0000932 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006355 GO:0006401 GO:0006402 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0015074 GO:0016070 GO:0016071 GO:0017148 GO:0019219 GO:0019222 GO:0019439 GO:0030014 GO:0030015 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032268 GO:0032269 GO:0032991 GO:0034248 GO:0034249 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1903506 GO:1990904 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

NOT2_3_5

Protein Analysis

560

Amino Acids

64.86

Weight (kDa)

5.58

Isoelectric Point (pI)

43.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	30 - 207	3.4e-57	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	264 - 503	3.1e-105	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	304 - 503	1.4e-62	Terpene synthase family 2, C-terminal metal binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008670)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07705 AT1G07705
fragaria_vesca	FvH4_3g34620 FvH4_3g34620 FvH4_3g34620
malus_domestica	MD03G1103300.v1.1 MD11G1117100.v1.1
prunus_persica	Prupe.6G087300_v2.0.a1
pyrus_communis	pycom03g08390 pycom11g09830
rosa_chinensis	RchiOBHm_Chr5g0062331
rosa_laevigata	RLG00000035550
rosa_multiflora	Rmu_sc0006295.1_g000002 Rmu_ssc0000409.1_g000034
rosa_roxburghii	Rroxscaffold_1G00018350
rosa_rugosa	Rorug05G0348500 Rorug05G0348600 Rorug05G0348700
rosa_samantha	Rh5AG408400 Rh5BG422100 Rh5CG446100 Rh5DG437100
rosa_wichuraiana	Rw5G038480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	393
AarI	CACCTGC	1 cut(s)	1616
Acc36I	ACCTGC	1 cut(s)	1616
AccI	GTMKAC	4 cut(s)	867, 1360, 1596, 1616
AccII	CGCG	2 cut(s)	1130, 1579
AciI	CCGC	1 cut(s)	1579
AclWI	GGATC	1 cut(s)	693
AcsI	RAATTY	4 cut(s)	158, 282, 294, 715
AcuI	CTGAAG	5 cut(s)	45, 206, 1008, 1329, 1547
AfeI	AGCGCT	1 cut(s)	242
AfiI	CCNNNNNNNGG	1 cut(s)	1311
AflIII	ACRYGT	3 cut(s)	408, 951, 1408
AjiI	CACGTC	1 cut(s)	952
AjnI	CCWGG	2 cut(s)	591, 1149
AluBI	AGCT	9 cut(s)	29, 71, 205, 346, 814, 992, 1093, 1160, 1421
AluI	AGCT	9 cut(s)	29, 71, 205, 346, 814, 992, 1093, 1160, 1421
Alw21I	GWGCWC	2 cut(s)	348, 1638
Alw26I	GTCTC	1 cut(s)	822
AlwI	GGATC	1 cut(s)	693
Ama87I	CYCGRG	2 cut(s)	469, 1031
Aor51HI	AGCGCT	1 cut(s)	242
AoxI	GGCC	2 cut(s)	540, 1547
ApeKI	GCWGC	3 cut(s)	5, 745, 814
ApoI	RAATTY	4 cut(s)	158, 282, 294, 715
ArsI	GACNNNNNNTTYG	2 cut(s)	785, 817
AspLEI	GCGC	2 cut(s)	243, 361
AspS9I	GGNCC	1 cut(s)	1548
AsuC2I	CCSGG	3 cut(s)	470, 471, 683
AsuHPI	GGTGA	3 cut(s)	107, 538, 1594
AsuNHI	GCTAGC	1 cut(s)	1255
AvaI	CYCGRG	2 cut(s)	469, 1031
AxyI	CCTNAGG	1 cut(s)	51
BanII	GRGCYC	2 cut(s)	348, 879
BbsI	GAAGAC	2 cut(s)	182, 905
Bbv12I	GWGCWC	2 cut(s)	348, 1638
BbvCI	CCTCAGC	1 cut(s)	1417
BbvI	GCAGC	2 cut(s)	757, 801
BccI	CCATC	4 cut(s)	428, 762, 996, 1604
BceAI	ACGGC	1 cut(s)	802
BciT130I	CCWGG	2 cut(s)	593, 1151
BclI	TGATCA	1 cut(s)	97
BcnI	CCSGG	3 cut(s)	470, 471, 683
BcoDI	GTCTC	1 cut(s)	822
BfaI	CTAG	5 cut(s)	17, 84, 329, 648, 1256
BfmI	CTRYAG	1 cut(s)	743
BfoI	RGCGCY	2 cut(s)	244, 362
BfuAI	ACCTGC	1 cut(s)	1616
BisI	GCNGC	3 cut(s)	6, 746, 815
BlsI	GCNGC	3 cut(s)	7, 747, 816
Bme1390I	CCNGG	5 cut(s)	470, 471, 593, 683, 1151
BmeT110I	CYCGRG	2 cut(s)	469, 1031
BmgBI	CACGTC	1 cut(s)	952
BmgT120I	GGNCC	1 cut(s)	1548
BmiI	GGNNCC	4 cut(s)	192, 1184, 1303, 1550
BmrFI	CCNGG	5 cut(s)	470, 471, 593, 683, 1151
BmsI	GCATC	3 cut(s)	171, 523, 1486
BmtI	GCTAGC	1 cut(s)	1259
BpiI	GAAGAC	2 cut(s)	182, 905
Bpu10I	CCTNAGC	1 cut(s)	1417
BpuEI	CTTGAG	2 cut(s)	581, 1622
BpuMI	CCSGG	3 cut(s)	470, 471, 683
BsaBI	GATNNNNATC	1 cut(s)	735
BsaI	GGTCTC	1 cut(s)	822
BsaJI	CCNNGG	4 cut(s)	469, 591, 1017, 1544
BsaWI	WCCGGW	1 cut(s)	193
Bsc4I	CCNNNNNNNGG	1 cut(s)	1311
Bse21I	CCTNAGG	1 cut(s)	51
Bse8I	GATNNNNATC	1 cut(s)	735
BseBI	CCWGG	2 cut(s)	593, 1151
BseDI	CCNNGG	4 cut(s)	469, 591, 1017, 1544
BseGI	GGATG	4 cut(s)	439, 926, 1375, 1498
BseJI	GATNNNNATC	1 cut(s)	735
BseLI	CCNNNNNNNGG	1 cut(s)	1311
BseMII	CTCAG	5 cut(s)	23, 42, 132, 391, 1431
BseXI	GCAGC	2 cut(s)	757, 801
Bsh1236I	CGCG	2 cut(s)	1130, 1579
BshFI	GGCC	2 cut(s)	542, 1549
BsiHKAI	GWGCWC	2 cut(s)	348, 1638
BsiHKCI	CYCGRG	2 cut(s)	469, 1031
BsiSI	CCGG	3 cut(s)	194, 470, 683
BslFI	GGGAC	2 cut(s)	452, 486
BslI	CCNNNNNNNGG	1 cut(s)	1311
BsmAI	GTCTC	1 cut(s)	822
BsmFI	GGGAC	2 cut(s)	452, 486
BsmI	GAATGC	2 cut(s)	46, 1433
BsnI	GGCC	2 cut(s)	542, 1549
Bso31I	GGTCTC	1 cut(s)	822
BsoBI	CYCGRG	2 cut(s)	469, 1031
Bsp1286I	GDGCHC	3 cut(s)	348, 879, 1638
Bsp143I	GATC	2 cut(s)	97, 685
Bsp19I	CCATGG	1 cut(s)	1017
BspACI	CCGC	1 cut(s)	1579
BspANI	GGCC	2 cut(s)	542, 1549
BspCNI	CTCAG	5 cut(s)	22, 43, 133, 390, 1430
BspFNI	CGCG	2 cut(s)	1130, 1579
BspLI	GGNNCC	4 cut(s)	192, 1184, 1303, 1550
BspMAI	CTGCAG	1 cut(s)	747
BspMI	ACCTGC	1 cut(s)	1616
BspOI	GCTAGC	1 cut(s)	1259
BspPI	GGATC	1 cut(s)	693
BspTNI	GGTCTC	1 cut(s)	822
BssECI	CCNNGG	4 cut(s)	469, 591, 1017, 1544
BssMI	GATC	2 cut(s)	97, 685
BssNAI	GTATAC	2 cut(s)	1597, 1617
BssT1I	CCWWGG	2 cut(s)	1017, 1544
Bst1107I	GTATAC	2 cut(s)	1597, 1617
Bst2UI	CCWGG	2 cut(s)	593, 1151
Bst4CI	ACNGT	2 cut(s)	320, 1062
BstC8I	GCNNGC	3 cut(s)	962, 1095, 1257
BstDEI	CTNAG	8 cut(s)	9, 51, 120, 141, 377, 503, 767, 1417
BstDSI	CCRYGG	1 cut(s)	1017
BstF5I	GGATG	4 cut(s)	439, 926, 1375, 1498
BstFNI	CGCG	2 cut(s)	1130, 1579
BstH2I	RGCGCY	2 cut(s)	244, 362
BstHHI	GCGC	2 cut(s)	243, 361
BstKTI	GATC	2 cut(s)	100, 688
BstMAI	GTCTC	1 cut(s)	822
BstMBI	GATC	2 cut(s)	97, 685
BstMWI	GCNNNNNNNGC	1 cut(s)	1472
BstNI	CCWGG	2 cut(s)	593, 1151
BstNSI	RCATGY	1 cut(s)	1412
BstSCI	CCNGG	5 cut(s)	468, 469, 591, 681, 1149
BstSFI	CTRYAG	1 cut(s)	743
BstUI	CGCG	2 cut(s)	1130, 1579
BstV1I	GCAGC	2 cut(s)	757, 801
BstV2I	GAAGAC	2 cut(s)	182, 905
BstZ17I	GTATAC	2 cut(s)	1597, 1617
Bsu36I	CCTNAGG	1 cut(s)	51
BsuRI	GGCC	2 cut(s)	542, 1549
BtgI	CCRYGG	1 cut(s)	1017
BtgZI	GCGATG	1 cut(s)	351
BtrI	CACGTC	1 cut(s)	952
BtsCI	GGATG	4 cut(s)	439, 926, 1375, 1498
BtsIMutI	CAGTG	1 cut(s)	1058
BveI	ACCTGC	1 cut(s)	1616
Cac8I	GCNNGC	3 cut(s)	962, 1095, 1257
CfoI	GCGC	2 cut(s)	243, 361
Cfr13I	GGNCC	1 cut(s)	1548
Cfr9I	CCCGGG	1 cut(s)	469
CspCI	CAANNNNNGTGG	2 cut(s)	541, 576
DdeI	CTNAG	8 cut(s)	9, 51, 120, 141, 377, 503, 767, 1417
DpnI	GATC	2 cut(s)	99, 687
DpnII	GATC	2 cut(s)	97, 685
DraI	TTTAAA	1 cut(s)	585
Ecl136II	GAGCTC	1 cut(s)	346
Eco130I	CCWWGG	2 cut(s)	1017, 1544
Eco24I	GRGCYC	2 cut(s)	348, 879
Eco31I	GGTCTC	1 cut(s)	822
Eco32I	GATATC	1 cut(s)	1009
Eco47III	AGCGCT	1 cut(s)	242
Eco53kI	GAGCTC	1 cut(s)	346
Eco57I	CTGAAG	5 cut(s)	45, 206, 1008, 1329, 1547
Eco81I	CCTNAGG	1 cut(s)	51
Eco88I	CYCGRG	2 cut(s)	469, 1031
EcoICRI	GAGCTC	1 cut(s)	346
EcoO109I	RGGNCCY	1 cut(s)	1548
EcoRI	GAATTC	1 cut(s)	158
EcoRII	CCWGG	2 cut(s)	591, 1149
EcoRV	GATATC	1 cut(s)	1009
EcoT14I	CCWWGG	2 cut(s)	1017, 1544
EcoT22I	ATGCAT	1 cut(s)	538
EcoT38I	GRGCYC	2 cut(s)	348, 879
ErhI	CCWWGG	2 cut(s)	1017, 1544
FalI	AAGNNNNNCTT	4 cut(s)	510, 542, 1077, 1109
FaqI	GGGAC	2 cut(s)	452, 486
FauI	CCCGC	1 cut(s)	1572
FauNDI	CATATG	1 cut(s)	112
FbaI	TGATCA	1 cut(s)	97
FblI	GTMKAC	4 cut(s)	867, 1360, 1596, 1616
Fnu4HI	GCNGC	3 cut(s)	6, 746, 815
FokI	GGATG	4 cut(s)	446, 913, 1382, 1505
FriOI	GRGCYC	2 cut(s)	348, 879
Fsp4HI	GCNGC	3 cut(s)	6, 746, 815
FspBI	CTAG	5 cut(s)	17, 84, 329, 648, 1256
GlaI	GCGC	2 cut(s)	242, 360
GluI	GCNGC	3 cut(s)	6, 746, 815
HaeII	RGCGCY	2 cut(s)	244, 362
HaeIII	GGCC	2 cut(s)	542, 1549
HapII	CCGG	3 cut(s)	194, 470, 683
HhaI	GCGC	2 cut(s)	243, 361
Hin6I	GCGC	2 cut(s)	241, 359
HinP1I	GCGC	2 cut(s)	241, 359
HincII	GTYRAC	1 cut(s)	316
HindII	GTYRAC	1 cut(s)	316
HindIII	AAGCTT	2 cut(s)	203, 1091
HinfI	GANTC	7 cut(s)	20, 449, 563, 651, 864, 1136, 1362
HpaII	CCGG	3 cut(s)	194, 470, 683
HphI	GGTGA	3 cut(s)	107, 538, 1594
Hpy166II	GTNNAC	5 cut(s)	316, 868, 1361, 1597, 1617
Hpy188I	TCNGA	5 cut(s)	12, 25, 380, 759, 1348
Hpy188III	TCNNGA	7 cut(s)	50, 560, 634, 712, 853, 1076, 1169
Hpy8I	GTNNAC	5 cut(s)	316, 868, 1361, 1597, 1617
Hpy99I	CGWCG	1 cut(s)	66
HpyAV	CCTTC	5 cut(s)	181, 553, 631, 784, 1498
HpyCH4III	ACNGT	2 cut(s)	320, 1062
HpyCH4IV	ACGT	5 cut(s)	64, 312, 408, 902, 951
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1472
HpyF3I	CTNAG	8 cut(s)	9, 51, 120, 141, 377, 503, 767, 1417
HpySE526I	ACGT	5 cut(s)	64, 312, 408, 902, 951
HspAI	GCGC	2 cut(s)	241, 359
Ksp22I	TGATCA	1 cut(s)	97
Kzo9I	GATC	2 cut(s)	97, 685
LmnI	GCTCC	4 cut(s)	34, 196, 366, 1307
Lsp1109I	GCAGC	2 cut(s)	757, 801
LweI	GCATC	3 cut(s)	171, 523, 1486
MaeI	CTAG	5 cut(s)	17, 84, 329, 648, 1256
MaeII	ACGT	5 cut(s)	64, 312, 408, 902, 951
MaeIII	GTNAC	7 cut(s)	320, 607, 643, 1049, 1234, 1291, 1450
MalI	GATC	2 cut(s)	99, 687
MboI	GATC	2 cut(s)	97, 685
MfeI	CAATTG	1 cut(s)	1098
MhlI	GDGCHC	3 cut(s)	348, 879, 1638
MlyI	GAGTC	4 cut(s)	572, 645, 873, 1356
MmeI	TCCRAC	3 cut(s)	56, 198, 708
MnlI	CCTC	8 cut(s)	46, 559, 639, 1096, 1292, 1397, 1426, 1562
Mph1103I	ATGCAT	1 cut(s)	538
MseI	TTAA	4 cut(s)	57, 479, 584, 1533
MslI	CAYNNNNRTG	2 cut(s)	153, 1626
MspA1I	CMGCKG	1 cut(s)	1421
MspI	CCGG	3 cut(s)	194, 470, 683
MspR9I	CCNGG	5 cut(s)	470, 471, 593, 683, 1151
MssI	GTTTAAAC	1 cut(s)	585
MunI	CAATTG	1 cut(s)	1098
Mva1269I	GAATGC	2 cut(s)	46, 1433
MvaI	CCWGG	2 cut(s)	593, 1151
MvnI	CGCG	2 cut(s)	1130, 1579
MwoI	GCNNNNNNNGC	1 cut(s)	1472
NciI	CCSGG	3 cut(s)	470, 471, 683
NcoI	CCATGG	1 cut(s)	1017
NdeI	CATATG	1 cut(s)	112
NdeII	GATC	2 cut(s)	97, 685
NheI	GCTAGC	1 cut(s)	1255
NlaIV	GGNNCC	4 cut(s)	192, 1184, 1303, 1550
NmuCI	GTSAC	3 cut(s)	320, 1291, 1450
NsiI	ATGCAT	1 cut(s)	538
NspI	RCATGY	1 cut(s)	1412
PaqCI	CACCTGC	1 cut(s)	1616
PciI	ACATGT	1 cut(s)	1408
PctI	GAATGC	2 cut(s)	46, 1433
PfeI	GAWTC	3 cut(s)	20, 449, 1136
PkrI	GCNGC	3 cut(s)	7, 747, 816
PleI	GAGTC	4 cut(s)	571, 645, 872, 1356
PmeI	GTTTAAAC	1 cut(s)	585
PpsI	GAGTC	4 cut(s)	571, 645, 872, 1356
PscI	ACATGT	1 cut(s)	1408
PsiI	TTATAA	1 cut(s)	393
Psp124BI	GAGCTC	1 cut(s)	348
Psp6I	CCWGG	2 cut(s)	591, 1149
PspGI	CCWGG	2 cut(s)	591, 1149
PspN4I	GGNNCC	4 cut(s)	192, 1184, 1303, 1550
PspPI	GGNCC	1 cut(s)	1548
PstI	CTGCAG	1 cut(s)	747
PvuII	CAGCTG	1 cut(s)	1421
RseI	CAYNNNNRTG	2 cut(s)	153, 1626
SacI	GAGCTC	1 cut(s)	348
SaqAI	TTAA	4 cut(s)	57, 479, 584, 1533
SatI	GCNGC	3 cut(s)	6, 746, 815
Sau3AI	GATC	2 cut(s)	97, 685
Sau96I	GGNCC	1 cut(s)	1548
SchI	GAGTC	4 cut(s)	572, 645, 873, 1356
ScrFI	CCNGG	5 cut(s)	470, 471, 593, 683, 1151
SduI	GDGCHC	3 cut(s)	348, 879, 1638
SfaNI	GCATC	3 cut(s)	171, 523, 1486
SfcI	CTRYAG	1 cut(s)	743
SmaI	CCCGGG	1 cut(s)	471
SmiMI	CAYNNNNRTG	2 cut(s)	153, 1626
SmlI	CTYRAG	2 cut(s)	560, 1637
SmoI	CTYRAG	2 cut(s)	560, 1637
SsiI	CCGC	1 cut(s)	1579
SspI	AATATT	1 cut(s)	133
SspMI	CTAG	5 cut(s)	17, 84, 329, 648, 1256
SstI	GAGCTC	1 cut(s)	348
StyD4I	CCNGG	5 cut(s)	468, 469, 591, 681, 1149
StyI	CCWWGG	2 cut(s)	1017, 1544
TaaI	ACNGT	2 cut(s)	320, 1062
TaiI	ACGT	5 cut(s)	67, 315, 411, 905, 954
TaqI	TCGA	5 cut(s)	61, 370, 654, 713, 1168
TaqII	GACCGA	1 cut(s)	846
TfiI	GAWTC	3 cut(s)	20, 449, 1136
Tru1I	TTAA	4 cut(s)	57, 479, 584, 1533
Tru9I	TTAA	4 cut(s)	57, 479, 584, 1533
TscAI	CASTG	1 cut(s)	1065
TseFI	GTSAC	3 cut(s)	320, 1291, 1450
TseI	GCWGC	3 cut(s)	5, 745, 814
Tsp45I	GTSAC	3 cut(s)	320, 1291, 1450
TspGWI	ACGGA	2 cut(s)	353, 528
TspMI	CCCGGG	1 cut(s)	469
TspRI	CASTG	1 cut(s)	1065
XapI	RAATTY	4 cut(s)	158, 282, 294, 715
XceI	RCATGY	1 cut(s)	1412
XcmI	CCANNNNNNNNNTGG	2 cut(s)	887, 1270
XmaI	CCCGGG	1 cut(s)	469
XmiI	GTMKAC	4 cut(s)	867, 1360, 1596, 1616
XspI	CTAG	5 cut(s)	17, 84, 329, 648, 1256
Zsp2I	ATGCAT	1 cut(s)	538

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.