Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0011547

Physical Location & Seq

Genomic Coordinates Forward (+)

13039429 .. 13041276

Gene Structure 1848 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1140300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

ATGGTTTACCTCTCCCTTCTAATCTTGGTTTCCCTAAGTTCAAGCTATGCTCAGCAGTTCTATGACCAATCTGATTGCGGTGTTGAGGCTAGCAATTCAGGCTCAAGATACATTTGCAATATGTTCCAAAATTCTTGCCAAACATTCTTGGTCTACAGAGCCAACCCGAATTTTCAAACTGTTTCGAATGTCTCAGACTTGTTTCGAATGGATTCTGATCAACTGCTTGGACTCAACAATCTCACATCTCCTTCTGAGGAACTGAAAGCAGGTAGGGAAGTTATTATTCCCATTAAATGTTCTTGCTCAGGTCAATATTTTCAGGCAAGTTTCAGCTACACGGTTTTGCAAAACACGTCATACTCCGAGGTTGCTTGTGGGGTTTTCGAAGGCTTGCTCAAGTCGTTTACACTCAAGGAGGAAAATATGTCCCAAGAAAACAAGCTTGTGGTTGGCACTGAGCTTCTTGTGCCTCTAAGATGTGCTTGTCCTGATAAGTTAGCTAGCAGTAGTGGAGTGAAGTACCTTGTGACCTACCCTCTCATAGAAGGCGACAGGCCAGTCATCTTAAGCCAGAAGTTTGGCATCTCTCCTGAAGATTTTTTATCAGTGAATCATTTAGCAAATGACGAAACTGTGTTTCCGAATACGACTGTTTTAGTTCCCTTGAGAGCAGCTCCGGAGTTAAACTTCAACATCCAATATTCTCCCCCTCCAGCTCCTACTCTTCTTCCCACAATTGCTGTGGAAAAATCTAATAGAAATGCGAAACTGATCAAGAAATTGTATGTAGCCGGGTCTGTTGTTGGGTTTTCTCTGCTACTGGCAGCTTTAATTGCATTTGTAATTTTGTACAGAAGGGCCTTAAGGAAATGGAAGAGAGAGAAGATCATGTCCTTTACTGCTTTAAGCTCTCCAATTTCATGTTCAACTGTCAGAAGCCCGTTTAAATCCGGTCAGACAGGCAGAAGCTCTCCGATTTCATCATGTTTATCGCCTGATATTCTTGCTGGATTGAAGTACTCGTTGTTCAATTATAGCATAGAAGAGCTGAGGAGAGCAACAAGGGATTTCAATGAAGAAAACAAGATTGGTTCTCAAGCGTACAGGGGAATAATAAATAATGTTGAAGTGATGATCAAGCAGATGAGATTTGAGGACACGAGCCATGTTATTGACGTGCATTCGAAGATCAACCACATCAACATCTTGAACTTAGAGGCGGTTTCTTACGGCGAAAATCACATGTCATGGTCTTATCTAGTTTTCGAGTTTCCGAGCAATGGCTGCTTGAGGGGCTGCTTGTCTAGTCCATCTAGTCCTATCAAGTGGCATTGGCGAACACAAATAGCTTTCGATATTGCAACTGGACTACACTACTTACACTGTTGTACTTTCCCTTCTTGTGCTCACCTAGGCATAAACACTAGAAACATTTTTGTGACAGCAAATTGGAGGGCAAAGCTTTCGAACATTGGAACCATATCGGCTGAGGGATTTTCGGAAGGAAATGACAAAGGATGGGTTGCACCAGAGTACCTTCTACACCGATCAGCTTCTGAGAAGGTGGATATTTTTGCATTTGGAGTTGTTTTGCTTGAGCTCATCTCAGCAAGAGAGGACATTGATGGGAAGTCGTTTAAAGAGTCCATCAAATTTTTGGGAGGGGGTGCTAGCGAAGGCGGTTTCCTCGAACAACTTAGGAGCTTCATGGATCCACAGTTGGAGGATTATCCTCTTGCAGAGGCCTTATGCTTAGCTGTTTTAGCGAAGGCCTGTGTGGAGGACGATCCTCTCCATCGGCCATCCATCGATGACATCATGAAAGTGCTCGCAAGAATGGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase_Tyr

Protein Analysis

616

Amino Acids

68.28

Weight (kDa)

6.3

Isoelectric Point (pI)

54.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	45 - 102	2.2e-21	NFP/LYK LysM1 domain
LysM2_CERK1_LYK3_4_5	PF23472	106 - 160	1.7e-18	LYK3/4/5 LysM2 domain
LysM3_LYK4_5	PF23473	175 - 223	2.1e-08	LYK4/5 LysM3 domain
PK_Tyr_Ser-Thr	PF07714	375 - 609	1.4e-21	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	388 - 609	6.9e-15	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0011547)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g31710
malus_domestica	MD00G1205900.v1.1 MD03G1121700.v1.1 MD11G1140300.v1.1 MD11G1140400.v1.1
prunus_persica	Prupe.6G104800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0058401
rosa_laevigata	RLG00000035042 RLG00000035217
rosa_multiflora	Rmu_sc0000367.1_g000110
rosa_roxburghii	Rroxscaffold_1G00022160 Rroxscaffold_1G00024260
rosa_rugosa	Rorug05G0313600.1
rosa_samantha	Rh5AG381100 Rh5BG378700 Rh5BG392700 Rh5CG416800 Rh5DG407900
rosa_wichuraiana	Rw5G034550 Rw5G035910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	560
Acc36I	ACCTGC	1 cut(s)	260
AccI	GTMKAC	1 cut(s)	153
AccIII	TCCGGA	1 cut(s)	679
AciI	CCGC	3 cut(s)	78, 1223, 1683
AclWI	GGATC	3 cut(s)	1709, 1722, 1784
AcoI	YGGCCR	1 cut(s)	1802
AcsI	RAATTY	3 cut(s)	130, 169, 1655
AcuI	CTGAAG	1 cut(s)	615
AfaI	GTAC	6 cut(s)	524, 854, 1022, 1106, 1393, 1538
AfiI	CCNNNNNNNGG	1 cut(s)	1283
AflII	CTTAAG	2 cut(s)	568, 865
AflIII	ACRYGT	2 cut(s)	354, 1245
AgsI	TTSAA	9 cut(s)	42, 176, 694, 930, 1018, 1033, 1075, 1130, 1213
AjiI	CACGTC	2 cut(s)	357, 1180
AjuI	GAANNNNNNNTTGG	4 cut(s)	910, 942, 1074, 1106
Alw21I	GWGCWC	3 cut(s)	1411, 1605, 1833
Alw26I	GTCTC	1 cut(s)	196
AlwI	GGATC	3 cut(s)	1709, 1722, 1784
AlwNI	CAGNNNCTG	1 cut(s)	1559
Aor13HI	TCCGGA	1 cut(s)	679
AoxI	GGCC	5 cut(s)	557, 861, 1746, 1773, 1802
ApeKI	GCWGC	4 cut(s)	674, 827, 1287, 1299
ApoI	RAATTY	3 cut(s)	130, 169, 1655
Asp700I	GAANNNNTTC	1 cut(s)	211
AspA2I	CCTAGG	1 cut(s)	1414
AspS9I	GGNCC	1 cut(s)	861
AsuC2I	CCSGG	1 cut(s)	796
AsuHPI	GGTGA	1 cut(s)	1403
AsuII	TTCGAA	5 cut(s)	185, 205, 387, 1187, 1469
AsuNHI	GCTAGC	3 cut(s)	89, 503, 1673
AvrII	CCTAGG	1 cut(s)	1414
BaeI	ACNNNNGTAYC	2 cut(s)	1520, 1553
BamHI	GGATCC	1 cut(s)	1714
BanII	GRGCYC	1 cut(s)	1605
BarI	GAAGNNNNNNTAC	2 cut(s)	1384, 1416
BauI	CACGAG	1 cut(s)	1162
Bbv12I	GWGCWC	3 cut(s)	1411, 1605, 1833
BbvCI	CCTCAGC	2 cut(s)	1052, 1491
BbvI	GCAGC	4 cut(s)	686, 839, 1274, 1286
BccI	CCATC	7 cut(s)	1321, 1515, 1622, 1658, 1806, 1813, 1817
BceAI	ACGGC	1 cut(s)	1249
BcgI	CGANNNNNNTGC	2 cut(s)	1449, 1483
BclI	TGATCA	3 cut(s)	217, 774, 1137
BcnI	CCSGG	1 cut(s)	796
BcoDI	GTCTC	1 cut(s)	196
BfaI	CTAG	8 cut(s)	90, 504, 1262, 1308, 1317, 1415, 1428, 1674
BfmI	CTRYAG	1 cut(s)	154
BfrI	CTTAAG	2 cut(s)	568, 865
BfuAI	ACCTGC	1 cut(s)	260
BisI	GCNGC	4 cut(s)	675, 828, 1288, 1300
BlnI	CCTAGG	1 cut(s)	1414
BlpI	GCTNAGC	2 cut(s)	51, 1756
BlsI	GCNGC	4 cut(s)	676, 829, 1289, 1301
BmcAI	AGTACT	1 cut(s)	1022
Bme1390I	CCNGG	1 cut(s)	796
BmgBI	CACGTC	2 cut(s)	357, 1180
BmgT120I	GGNCC	1 cut(s)	861
BmiI	GGNNCC	2 cut(s)	1480, 1716
BmrFI	CCNGG	1 cut(s)	796
BmsI	GCATC	1 cut(s)	594
BmtI	GCTAGC	3 cut(s)	93, 507, 1677
BplI	GAGNNNNNCTC	4 cut(s)	661, 693, 1592, 1624
BpmI	CTGGAG	1 cut(s)	699
Bpu10I	CCTNAGC	3 cut(s)	307, 1052, 1491
Bpu1102I	GCTNAGC	2 cut(s)	51, 1756
Bpu14I	TTCGAA	5 cut(s)	185, 205, 387, 1187, 1469
BpuEI	CTTGAG	7 cut(s)	88, 383, 398, 688, 1083, 1312, 1619
BpuMI	CCSGG	1 cut(s)	796
Bsa29I	ATCGAT	1 cut(s)	1812
BsaBI	GATNNNNATC	1 cut(s)	216
BsaJI	CCNNGG	2 cut(s)	366, 1414
BsaWI	WCCGGW	2 cut(s)	679, 953
Bsc4I	CCNNNNNNNGG	1 cut(s)	1283
Bse1I	ACTGG	3 cut(s)	560, 828, 1372
Bse3DI	GCAATG	1 cut(s)	1288
Bse8I	GATNNNNATC	1 cut(s)	216
BseAI	TCCGGA	1 cut(s)	679
BseCI	ATCGAT	1 cut(s)	1812
BseDI	CCNNGG	2 cut(s)	366, 1414
BseGI	GGATG	3 cut(s)	696, 1526, 1805
BseJI	GATNNNNATC	1 cut(s)	216
BseLI	CCNNNNNNNGG	1 cut(s)	1283
BseMI	GCAATG	1 cut(s)	1288
BseMII	CTCAG	9 cut(s)	65, 207, 246, 321, 450, 1043, 1482, 1551, 1623
BseNI	ACTGG	3 cut(s)	560, 828, 1372
BseRI	GAGGAG	1 cut(s)	1069
BseXI	GCAGC	4 cut(s)	686, 839, 1274, 1286
BshFI	GGCC	5 cut(s)	559, 863, 1748, 1775, 1804
BshVI	ATCGAT	1 cut(s)	1812
BsiHKAI	GWGCWC	3 cut(s)	1411, 1605, 1833
BsiSI	CCGG	3 cut(s)	680, 795, 954
BslFI	GGGAC	1 cut(s)	415
BslI	CCNNNNNNNGG	1 cut(s)	1283
BsmAI	GTCTC	1 cut(s)	196
BsmFI	GGGAC	1 cut(s)	415
BsmI	GAATGC	1 cut(s)	1183
BsnI	GGCC	5 cut(s)	559, 863, 1748, 1775, 1804
Bsp119I	TTCGAA	5 cut(s)	185, 205, 387, 1187, 1469
Bsp1286I	GDGCHC	3 cut(s)	1411, 1605, 1833
Bsp13I	TCCGGA	1 cut(s)	679
Bsp1407I	TGTACA	1 cut(s)	852
Bsp143I	GATC	8 cut(s)	217, 774, 888, 1137, 1191, 1550, 1714, 1789
Bsp1720I	GCTNAGC	2 cut(s)	51, 1756
BspACI	CCGC	3 cut(s)	78, 1223, 1683
BspANI	GGCC	5 cut(s)	559, 863, 1748, 1775, 1804
BspCNI	CTCAG	9 cut(s)	64, 206, 247, 320, 451, 1044, 1483, 1552, 1622
BspDI	ATCGAT	1 cut(s)	1812
BspEI	TCCGGA	1 cut(s)	679
BspHI	TCATGA	1 cut(s)	1821
BspLI	GGNNCC	2 cut(s)	1480, 1716
BspMI	ACCTGC	1 cut(s)	260
BspOI	GCTAGC	3 cut(s)	93, 507, 1677
BspPI	GGATC	3 cut(s)	1709, 1722, 1784
BspQI	GCTCTTC	1 cut(s)	1041
BspT104I	TTCGAA	5 cut(s)	185, 205, 387, 1187, 1469
BspTI	CTTAAG	2 cut(s)	568, 865
BsrDI	GCAATG	1 cut(s)	1288
BsrGI	TGTACA	1 cut(s)	852
BsrI	ACTGG	3 cut(s)	560, 828, 1372
BssECI	CCNNGG	2 cut(s)	366, 1414
BssMI	GATC	8 cut(s)	217, 774, 888, 1137, 1191, 1550, 1714, 1789
BssSI	CACGAG	1 cut(s)	1162
BssT1I	CCWWGG	1 cut(s)	1414
Bst2BI	CACGAG	1 cut(s)	1162
Bst4CI	ACNGT	7 cut(s)	181, 343, 637, 655, 934, 1388, 1722
Bst6I	CTCTTC	3 cut(s)	732, 872, 1041
BstAFI	CTTAAG	2 cut(s)	568, 865
BstAPI	GCANNNNNTGC	1 cut(s)	1287
BstAUI	TGTACA	1 cut(s)	852
BstBI	TTCGAA	5 cut(s)	185, 205, 387, 1187, 1469
BstC8I	GCNNGC	5 cut(s)	91, 395, 505, 1675, 1833
BstF5I	GGATG	3 cut(s)	696, 1526, 1805
BstKTI	GATC	8 cut(s)	220, 777, 891, 1140, 1194, 1553, 1717, 1792
BstMAI	GTCTC	1 cut(s)	196
BstMBI	GATC	8 cut(s)	217, 774, 888, 1137, 1191, 1550, 1714, 1789
BstMWI	GCNNNNNNNGC	6 cut(s)	99, 469, 836, 1287, 1296, 1766
BstNSI	RCATGY	1 cut(s)	1249
BstSCI	CCNGG	1 cut(s)	794
BstSFI	CTRYAG	1 cut(s)	154
BstV1I	GCAGC	4 cut(s)	686, 839, 1274, 1286
BstX2I	RGATCY	1 cut(s)	1714
BstXI	CCANNNNNNTGG	1 cut(s)	581
BstYI	RGATCY	1 cut(s)	1714
Bsu15I	ATCGAT	1 cut(s)	1812
BsuRI	GGCC	5 cut(s)	559, 863, 1748, 1775, 1804
BsuTUI	ATCGAT	1 cut(s)	1812
BtrI	CACGTC	2 cut(s)	357, 1180
BtsCI	GGATG	3 cut(s)	696, 1526, 1805
BtsIMutI	CAGTG	3 cut(s)	456, 615, 1384
BveI	ACCTGC	1 cut(s)	260
Cac8I	GCNNGC	5 cut(s)	91, 395, 505, 1675, 1833
CaiI	CAGNNNCTG	1 cut(s)	1559
CciI	TCATGA	1 cut(s)	1821
Cfr13I	GGNCC	1 cut(s)	861
ClaI	ATCGAT	1 cut(s)	1812
Csp6I	GTAC	6 cut(s)	523, 853, 1021, 1105, 1392, 1537
CspCI	CAANNNNNGTGG	2 cut(s)	726, 761
CviAII	CATG	8 cut(s)	892, 924, 987, 1169, 1246, 1251, 1711, 1822
CviQI	GTAC	6 cut(s)	523, 853, 1021, 1105, 1392, 1537
DpnI	GATC	8 cut(s)	219, 776, 890, 1139, 1193, 1552, 1716, 1791
DpnII	GATC	8 cut(s)	217, 774, 888, 1137, 1191, 1550, 1714, 1789
DraI	TTTAAA	2 cut(s)	949, 1642
DrdI	GACNNNNNNGTC	1 cut(s)	560
DseDI	GACNNNNNNGTC	1 cut(s)	560
EaeI	YGGCCR	1 cut(s)	1802
Eam1104I	CTCTTC	3 cut(s)	732, 872, 1041
EarI	CTCTTC	3 cut(s)	732, 872, 1041
Ecl136II	GAGCTC	1 cut(s)	1603
Eco130I	CCWWGG	1 cut(s)	1414
Eco147I	AGGCCT	2 cut(s)	1748, 1775
Eco24I	GRGCYC	1 cut(s)	1605
Eco53kI	GAGCTC	1 cut(s)	1603
Eco57I	CTGAAG	1 cut(s)	615
EcoICRI	GAGCTC	1 cut(s)	1603
EcoO109I	RGGNCCY	1 cut(s)	861
EcoT14I	CCWWGG	1 cut(s)	1414
EcoT38I	GRGCYC	1 cut(s)	1605
ErhI	CCWWGG	1 cut(s)	1414
FaeI	CATG	8 cut(s)	895, 927, 990, 1172, 1249, 1254, 1714, 1825
FalI	AAGNNNNNCTT	2 cut(s)	469, 501
FaqI	GGGAC	1 cut(s)	415
FatI	CATG	8 cut(s)	891, 923, 986, 1168, 1245, 1250, 1710, 1821
FbaI	TGATCA	3 cut(s)	217, 774, 1137
FblI	GTMKAC	1 cut(s)	153
Fnu4HI	GCNGC	4 cut(s)	675, 828, 1288, 1300
FokI	GGATG	3 cut(s)	683, 1533, 1792
FriOI	GRGCYC	1 cut(s)	1605
Fsp4HI	GCNGC	4 cut(s)	675, 828, 1288, 1300
FspBI	CTAG	8 cut(s)	90, 504, 1262, 1308, 1317, 1415, 1428, 1674
GluI	GCNGC	4 cut(s)	675, 828, 1288, 1300
GsuI	CTGGAG	1 cut(s)	699
HaeIII	GGCC	5 cut(s)	559, 863, 1748, 1775, 1804
HapII	CCGG	3 cut(s)	680, 795, 954
Hin1II	CATG	8 cut(s)	895, 927, 990, 1172, 1249, 1254, 1714, 1825
HindIII	AAGCTT	2 cut(s)	443, 1463
HinfI	GANTC	4 cut(s)	212, 231, 613, 1646
HpaII	CCGG	3 cut(s)	680, 795, 954
HphI	GGTGA	1 cut(s)	1403
Hpy166II	GTNNAC	3 cut(s)	7, 154, 408
Hpy188III	TCNNGA	7 cut(s)	105, 491, 593, 680, 778, 1210, 1822
Hpy8I	GTNNAC	3 cut(s)	7, 154, 408
HpyCH4III	ACNGT	7 cut(s)	181, 343, 637, 655, 934, 1388, 1722
HpyCH4IV	ACGT	2 cut(s)	356, 1179
HpyCH4V	TGCA	8 cut(s)	117, 349, 839, 1183, 1364, 1529, 1580, 1742
HpyF10VI	GCNNNNNNNGC	6 cut(s)	99, 469, 836, 1287, 1296, 1766
HpySE526I	ACGT	2 cut(s)	356, 1179
Hsp92II	CATG	8 cut(s)	895, 927, 990, 1172, 1249, 1254, 1714, 1825
Kpn2I	TCCGGA	1 cut(s)	679
Ksp22I	TGATCA	3 cut(s)	217, 774, 1137
Kzo9I	GATC	8 cut(s)	217, 774, 888, 1137, 1191, 1550, 1714, 1789
LguI	GCTCTTC	1 cut(s)	1041
LmnI	GCTCC	3 cut(s)	682, 724, 1704
Lsp1109I	GCAGC	4 cut(s)	686, 839, 1274, 1286
LweI	GCATC	1 cut(s)	594
MaeI	CTAG	8 cut(s)	90, 504, 1262, 1308, 1317, 1415, 1428, 1674
MaeII	ACGT	2 cut(s)	356, 1179
MaeIII	GTNAC	2 cut(s)	529, 1441
MalI	GATC	8 cut(s)	219, 776, 890, 1139, 1193, 1552, 1716, 1791
MboI	GATC	8 cut(s)	217, 774, 888, 1137, 1191, 1550, 1714, 1789
MboII	GAAGA	8 cut(s)	608, 719, 722, 889, 898, 1058, 1091, 1201
MfeI	CAATTG	1 cut(s)	738
MflI	RGATCY	1 cut(s)	1714
MhlI	GDGCHC	3 cut(s)	1411, 1605, 1833
MlyI	GAGTC	2 cut(s)	225, 1655
MmeI	TCCRAC	1 cut(s)	1704
MroI	TCCGGA	1 cut(s)	679
MroXI	GAANNNNTTC	1 cut(s)	211
MseI	TTAA	8 cut(s)	294, 569, 686, 833, 866, 908, 948, 1641
MslI	CAYNNNNRTG	2 cut(s)	1439, 1826
MspCI	CTTAAG	2 cut(s)	568, 865
MspI	CCGG	3 cut(s)	680, 795, 954
MspR9I	CCNGG	1 cut(s)	796
MunI	CAATTG	1 cut(s)	738
Mva1269I	GAATGC	1 cut(s)	1183
MwoI	GCNNNNNNNGC	6 cut(s)	99, 469, 836, 1287, 1296, 1766
NciI	CCSGG	1 cut(s)	796
NdeII	GATC	8 cut(s)	217, 774, 888, 1137, 1191, 1550, 1714, 1789
NheI	GCTAGC	3 cut(s)	89, 503, 1673
NlaIII	CATG	8 cut(s)	895, 927, 990, 1172, 1249, 1254, 1714, 1825
NlaIV	GGNNCC	2 cut(s)	1480, 1716
NmuCI	GTSAC	2 cut(s)	529, 1441
NspI	RCATGY	1 cut(s)	1249
NspV	TTCGAA	5 cut(s)	185, 205, 387, 1187, 1469
PagI	TCATGA	1 cut(s)	1821
PceI	AGGCCT	2 cut(s)	1748, 1775
PciI	ACATGT	1 cut(s)	1245
PciSI	GCTCTTC	1 cut(s)	1041
PctI	GAATGC	1 cut(s)	1183
PdmI	GAANNNNTTC	1 cut(s)	211
PfeI	GAWTC	2 cut(s)	212, 613
PkrI	GCNGC	4 cut(s)	676, 829, 1289, 1301
PleI	GAGTC	2 cut(s)	225, 1654
PpsI	GAGTC	2 cut(s)	225, 1654
PscI	ACATGT	1 cut(s)	1245
Psp124BI	GAGCTC	1 cut(s)	1605
PspN4I	GGNNCC	2 cut(s)	1480, 1716
PspPI	GGNCC	1 cut(s)	861
PsrI	GAACNNNNNNTAC	2 cut(s)	1013, 1045
PstNI	CAGNNNCTG	1 cut(s)	1559
PsuI	RGATCY	1 cut(s)	1714
RsaI	GTAC	6 cut(s)	524, 854, 1022, 1106, 1393, 1538
RsaNI	GTAC	6 cut(s)	523, 853, 1021, 1105, 1392, 1537
RseI	CAYNNNNRTG	2 cut(s)	1439, 1826
SacI	GAGCTC	1 cut(s)	1605
SapI	GCTCTTC	1 cut(s)	1041
SaqAI	TTAA	8 cut(s)	294, 569, 686, 833, 866, 908, 948, 1641
SatI	GCNGC	4 cut(s)	675, 828, 1288, 1300
Sau3AI	GATC	8 cut(s)	217, 774, 888, 1137, 1191, 1550, 1714, 1789
Sau96I	GGNCC	1 cut(s)	861
ScaI	AGTACT	1 cut(s)	1022
SchI	GAGTC	2 cut(s)	225, 1655
ScrFI	CCNGG	1 cut(s)	796
SduI	GDGCHC	3 cut(s)	1411, 1605, 1833
SfaNI	GCATC	1 cut(s)	594
SfcI	CTRYAG	1 cut(s)	154
SfuI	TTCGAA	5 cut(s)	185, 205, 387, 1187, 1469
SmiMI	CAYNNNNRTG	2 cut(s)	1439, 1826
SmlI	CTYRAG	9 cut(s)	103, 398, 413, 568, 667, 865, 1098, 1291, 1598
SmoI	CTYRAG	9 cut(s)	103, 398, 413, 568, 667, 865, 1098, 1291, 1598
SseBI	AGGCCT	2 cut(s)	1748, 1775
SsiI	CCGC	3 cut(s)	78, 1223, 1683
SspI	AATATT	2 cut(s)	317, 704
SspMI	CTAG	8 cut(s)	90, 504, 1262, 1308, 1317, 1415, 1428, 1674
SstI	GAGCTC	1 cut(s)	1605
StuI	AGGCCT	2 cut(s)	1748, 1775
StyD4I	CCNGG	1 cut(s)	794
StyI	CCWWGG	1 cut(s)	1414
TaaI	ACNGT	7 cut(s)	181, 343, 637, 655, 934, 1388, 1722
TaiI	ACGT	2 cut(s)	359, 1182
TaqI	TCGA	9 cut(s)	185, 205, 387, 1187, 1269, 1356, 1469, 1692, 1812
TatI	WGTACW	3 cut(s)	852, 1020, 1391
TfiI	GAWTC	2 cut(s)	212, 613
Tru1I	TTAA	8 cut(s)	294, 569, 686, 833, 866, 908, 948, 1641
Tru9I	TTAA	8 cut(s)	294, 569, 686, 833, 866, 908, 948, 1641
TscAI	CASTG	3 cut(s)	463, 615, 1391
TseFI	GTSAC	2 cut(s)	529, 1441
TseI	GCWGC	4 cut(s)	674, 827, 1287, 1299
Tsp45I	GTSAC	2 cut(s)	529, 1441
TspDTI	ATGAA	5 cut(s)	912, 972, 1092, 1699, 1838
TspRI	CASTG	3 cut(s)	463, 615, 1391
Vha464I	CTTAAG	2 cut(s)	568, 865
XapI	RAATTY	3 cut(s)	130, 169, 1655
XceI	RCATGY	1 cut(s)	1249
XcmI	CCANNNNNNNNNTGG	2 cut(s)	742, 1657
XmaJI	CCTAGG	1 cut(s)	1414
XmiI	GTMKAC	1 cut(s)	153
XmnI	GAANNNNTTC	1 cut(s)	211
XspI	CTAG	8 cut(s)	90, 504, 1262, 1308, 1317, 1415, 1428, 1674
ZrmI	AGTACT	1 cut(s)	1022

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.