Prupe.6G104800_v2.0.a1

Protein kinase domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
7418554 .. 7420929
2376 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G104800.1

Sequence Viewer

Length: 1848 bp
ATGATTTATCTCTGCTTTTTCATCTTGGTTTGCCTAAATTTAAGCTATGCTCAGCAATATTATGATCCAACTGAGTGTGCTTCTGATGCCAGCTATTCAGGCTCAAGATACATTTGCAATATGTTCCAAAATTCTTGCAGAACATTCTTGGTCTACCGAGCCAACCCGCATTTTCGGACTGTTTCGAATATCTCAGAGTTGTTTCAGATGGACTCTGATGCCCTGCTTGGGCTCAACAATCTTACTTCTCCTTCTGAGGCACTCAGAGCAGGTAGGGAGGTTCTTATTCCCATTGACTGTTCTTGCTCAGGTCAATATTTTCAGGCAAGTTTCAGCTACATGGTTTCCGAAAACACATCATACTCCGAGATAGCTTGTGGTGTTTTCGAAGGCTTGCTCAAGTCCTTTACATTTCGTGAGGAAAACTTGTCCCAAGAAAACAAGCTTAAGGTTGGTACTAAACTTCTTTTGCCTCTAAGATGTGCTTGTCCTGATAAGTTAGCTAGCAGTAGTGGAGTGAAGTACCTTGTGACATACCCTTTTGTAGAAGGCGACAGACCAATCATATTGAGCCAGAAGTTTGGCATCTCTCCTGAAGATTTATGGGCCGTTAATCATTTAGGACCAAGCCAAACTGTATTTCCAAAAACAACTGTTTTAGTTCCCTTGAGAGCACCTCCAGTCTTAAACTTCAATATCCTAGATTCTCCACCTCCAGCTCCTGATTTTCTTCCAACAAATCCTGTGGAAAAAACAGTTAAAAACACAAAAGTGAAGAAATTGTATATAGCAGGGTCTGTTGTTGGGTTTTCTCTGCTACTTGCAGCATTAATTGCATTTATAATTTTGTATAGAAGGGCCTTAAAGAAATGGAAGAGTGAGAAGCTCCAGTCCTTTACTGCTTTGAGCTCTCCAATTTCATGTTCAACAGTCAGAAGCCCTATTAAATCCGGTCAAACGGGCAGAAGCTCTCCAATTTCATCATGTTTATCTCCGGATATTCTTGCTGGATTGAAGTATTCTTTGTTCAACTATAGCTTAGAAGAACTCAGGAGAGCAACAAGGGATTTCAATGAAGAAAACAAGATTGGTTCTCTGGTCTATAGGGGATTGATAAATAATGTTGAAGTGATGATCAAGCAGATGCGGTTTGAAGAGACCAGCCATGTTATTGATGTACATTCAAAAATCAACCACATCAACATCTTGAACTTAGAGGCTGTTTCTTATGGAGAAAATCACTTGGCTTGGTCTTATCTGGTGTTTGAGTATCCAAGCAATGGCTGCTTGAGGGACTGCTTGTCTAGTCCATCTATTACTCCTCTCAAGTGGCATCGACGAACACAAATAGCTTTCGATATTGCTACAGGACTTCACTATTTACACTGTTGTACTTTCCCTTCATGTGCACACCTAGACATAAATACTAGAAACATTTTTGTGACAGAAAATTGGAGGGCAAAACTTTCGAATATTGGAACTATCTCTGCGTTTGGATCTTCCGAAGGAAATGACAAAGGATGGGTTGCACCAGAGTACCTTCTGCATGGCTCAGCTTCTGAGAAGGTGGATATTTTTGCATTTGGAGTTGTTTTGCTTGAGCTCATCTCAGCAAGAGAGGACATTGATGGAAAGTTTTTCAAAGAGTCCATCAAATTTTTGGGAGGAGGTGCTAGCGAAGGTGGTTTCCTCGAACAACTTAGGAGCTTCATGGATCCGCAGCTGGAGGACTATCCTCTTGCAGAGGCTTTATGCTTGGCTGTTTTAGCAAAGGCCTGTGTGGAGGATGACCCTCTCCATCGGCCGTCCATCGATGATATCATGAAAGTCCTTGCCAGAATGGTCTGA

Protein Analysis

616

Amino Acids

68.57

Weight (kDa)

6.48

Isoelectric Point (pI)

54.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 842
Acc36I ACCTGC 1 cut(s) 260
AccB7I CCANNNNNTGG 1 cut(s) 1280
AccI GTMKAC 1 cut(s) 153
AccIII TCCGGA 1 cut(s) 994
AciI CCGC 3 cut(s) 167, 1147, 1718
AclWI GGATC 4 cut(s) 59, 1504, 1709, 1722
AcoI YGGCCR 1 cut(s) 1802
AcsI RAATTY 3 cut(s) 37, 130, 1655
AcuI CTGAAG 1 cut(s) 615
AfaI GTAC 5 cut(s) 457, 524, 1179, 1393, 1538
AfiI CCNNNNNNNGG 2 cut(s) 228, 1280
AflII CTTAAG 1 cut(s) 446
AhdI GACNNNNNGTC 1 cut(s) 1300
AjuI GAANNNNNNNTTGG 6 cut(s) 624, 656, 907, 939, 1071, 1103
AleI CACNNNNGTG 1 cut(s) 770
Alw21I GWGCWC 4 cut(s) 676, 911, 1411, 1605
Alw26I GTCTC 1 cut(s) 1151
Alw44I GTGCAC 1 cut(s) 1407
AlwI GGATC 4 cut(s) 59, 1504, 1709, 1722
AlwNI CAGNNNCTG 3 cut(s) 722, 797, 1559
Aor13HI TCCGGA 1 cut(s) 994
AoxI GGCC 4 cut(s) 606, 858, 1773, 1802
ApaLI GTGCAC 1 cut(s) 1407
ApeKI GCWGC 3 cut(s) 824, 1284, 1720
ApoI RAATTY 3 cut(s) 37, 130, 1655
AseI ATTAAT 1 cut(s) 830
AspS9I GGNCC 3 cut(s) 606, 623, 858
AsuII TTCGAA 3 cut(s) 185, 387, 1469
AsuNHI GCTAGC 2 cut(s) 503, 1673
AvaII GGWCC 1 cut(s) 623
BaeGI GKGCMC 1 cut(s) 1411
BaeI ACNNNNGTAYC 2 cut(s) 1520, 1553
BamHI GGATCC 1 cut(s) 1714
BanII GRGCYC 3 cut(s) 234, 911, 1605
BarI GAAGNNNNNNTAC 2 cut(s) 1384, 1416
Bbv12I GWGCWC 4 cut(s) 676, 911, 1411, 1605
BbvI GCAGC 3 cut(s) 836, 1271, 1732
BccI CCATC 7 cut(s) 202, 1318, 1515, 1622, 1658, 1806, 1817
BceAI ACGGC 2 cut(s) 593, 1789
BcgI CGANNNNNNTGC 2 cut(s) 1449, 1483
BciVI GTATCC 1 cut(s) 1281
BclI TGATCA 1 cut(s) 1134
BcoDI GTCTC 1 cut(s) 1151
BfaI CTAG 6 cut(s) 504, 701, 1305, 1415, 1428, 1674
BfmI CTRYAG 3 cut(s) 1033, 1102, 1365
BfrI CTTAAG 1 cut(s) 446
BfuAI ACCTGC 1 cut(s) 260
BfuI GTATCC 1 cut(s) 1281
BisI GCNGC 3 cut(s) 825, 1285, 1721
BlpI GCTNAGC 2 cut(s) 51, 1552
BlsI GCNGC 3 cut(s) 826, 1286, 1722
Bme18I GGWCC 1 cut(s) 623
BmeRI GACNNNNNGTC 1 cut(s) 1300
BmgT120I GGNCC 3 cut(s) 606, 623, 858
BmiI GGNNCC 1 cut(s) 1716
BmsI GCATC 5 cut(s) 76, 208, 594, 1134, 1342
BmtI GCTAGC 2 cut(s) 507, 1677
BplI GAGNNNNNCTC 4 cut(s) 661, 693, 1592, 1624
BpmI CTGGAG 4 cut(s) 663, 699, 872, 1745
Bpu10I CCTNAGC 1 cut(s) 307
Bpu1102I GCTNAGC 2 cut(s) 51, 1552
Bpu14I TTCGAA 3 cut(s) 185, 387, 1469
BpuEI CTTGAG 6 cut(s) 88, 383, 688, 1309, 1310, 1619
Bsa29I ATCGAT 1 cut(s) 1812
BsaI GGTCTC 1 cut(s) 1151
BsaWI WCCGGW 2 cut(s) 950, 994
Bsc4I CCNNNNNNNGG 2 cut(s) 228, 1280
Bse1I ACTGG 2 cut(s) 680, 889
Bse3DI GCAATG 1 cut(s) 1285
BseAI TCCGGA 1 cut(s) 994
BseCI ATCGAT 1 cut(s) 1812
BseGI GGATG 2 cut(s) 1526, 1792
BseLI CCNNNNNNNGG 2 cut(s) 228, 1280
BseMI GCAATG 1 cut(s) 1285
BseNI ACTGG 2 cut(s) 680, 889
BseRI GAGGAG 2 cut(s) 1311, 1680
BseSI GKGCMC 1 cut(s) 1411
BseX3I CGGCCG 1 cut(s) 1802
BseXI GCAGC 3 cut(s) 836, 1271, 1732
Bsh1285I CGRYCG 1 cut(s) 1805
BshFI GGCC 4 cut(s) 608, 860, 1775, 1804
BshVI ATCGAT 1 cut(s) 1812
BsiEI CGRYCG 1 cut(s) 1805
BsiHKAI GWGCWC 4 cut(s) 676, 911, 1411, 1605
BsiSI CCGG 2 cut(s) 951, 995
BslFI GGGAC 2 cut(s) 415, 1307
BslI CCNNNNNNNGG 2 cut(s) 228, 1280
BsmAI GTCTC 1 cut(s) 1151
BsmFI GGGAC 2 cut(s) 415, 1307
BsnI GGCC 4 cut(s) 608, 860, 1775, 1804
Bso31I GGTCTC 1 cut(s) 1151
Bsp119I TTCGAA 3 cut(s) 185, 387, 1469
Bsp1286I GDGCHC 5 cut(s) 234, 676, 911, 1411, 1605
Bsp13I TCCGGA 1 cut(s) 994
Bsp1407I TGTACA 1 cut(s) 1177
Bsp143I GATC 4 cut(s) 64, 1134, 1496, 1714
Bsp1720I GCTNAGC 2 cut(s) 51, 1552
BspACI CCGC 3 cut(s) 167, 1147, 1718
BspANI GGCC 4 cut(s) 608, 860, 1775, 1804
BspDI ATCGAT 1 cut(s) 1812
BspEI TCCGGA 1 cut(s) 994
BspHI TCATGA 1 cut(s) 1821
BspLI GGNNCC 1 cut(s) 1716
BspMI ACCTGC 1 cut(s) 260
BspOI GCTAGC 2 cut(s) 507, 1677
BspPI GGATC 4 cut(s) 59, 1504, 1709, 1722
BspT104I TTCGAA 3 cut(s) 185, 387, 1469
BspTI CTTAAG 1 cut(s) 446
BspTNI GGTCTC 1 cut(s) 1151
BsrDI GCAATG 1 cut(s) 1285
BsrGI TGTACA 1 cut(s) 1177
BsrI ACTGG 2 cut(s) 680, 889
BssMI GATC 4 cut(s) 64, 1134, 1496, 1714
Bst4CI ACNGT 7 cut(s) 181, 299, 637, 655, 757, 931, 1388
Bst6I CTCTTC 2 cut(s) 869, 1149
BstAFI CTTAAG 1 cut(s) 446
BstAPI GCANNNNNTGC 2 cut(s) 833, 1284
BstAUI TGTACA 1 cut(s) 1177
BstBI TTCGAA 3 cut(s) 185, 387, 1469
BstC8I GCNNGC 4 cut(s) 91, 395, 505, 1675
BstF5I GGATG 2 cut(s) 1526, 1792
BstKTI GATC 4 cut(s) 67, 1137, 1499, 1717
BstMAI GTCTC 1 cut(s) 1151
BstMBI GATC 4 cut(s) 64, 1134, 1496, 1714
BstMCI CGRYCG 1 cut(s) 1805
BstMWI GCNNNNNNNGC 6 cut(s) 86, 99, 266, 833, 1284, 1766
BstSFI CTRYAG 3 cut(s) 1033, 1102, 1365
BstSLI GKGCMC 1 cut(s) 1411
BstV1I GCAGC 3 cut(s) 836, 1271, 1732
BstX2I RGATCY 2 cut(s) 1496, 1714
BstXI CCANNNNNNTGG 1 cut(s) 581
BstYI RGATCY 2 cut(s) 1496, 1714
BstZI CGGCCG 1 cut(s) 1802
Bsu15I ATCGAT 1 cut(s) 1812
BsuI GTATCC 1 cut(s) 1281
BsuRI GGCC 4 cut(s) 608, 860, 1775, 1804
BsuTUI ATCGAT 1 cut(s) 1812
BtsCI GGATG 2 cut(s) 1526, 1792
BtsIMutI CAGTG 1 cut(s) 1384
BveI ACCTGC 1 cut(s) 260
Cac8I GCNNGC 4 cut(s) 91, 395, 505, 1675
CaiI CAGNNNCTG 3 cut(s) 722, 797, 1559
CciI TCATGA 1 cut(s) 1821
Cfr13I GGNCC 3 cut(s) 606, 623, 858
ClaI ATCGAT 1 cut(s) 1812
Csp6I GTAC 5 cut(s) 456, 523, 1178, 1392, 1537
CspCI CAANNNNNGTGG 2 cut(s) 726, 761
CviAII CATG 8 cut(s) 340, 921, 984, 1166, 1404, 1547, 1711, 1822
CviQI GTAC 5 cut(s) 456, 523, 1178, 1392, 1537
DpnI GATC 4 cut(s) 66, 1136, 1498, 1716
DpnII GATC 4 cut(s) 64, 1134, 1496, 1714
DriI GACNNNNNGTC 1 cut(s) 1300
EaeI YGGCCR 1 cut(s) 1802
EagI CGGCCG 1 cut(s) 1802
Eam1104I CTCTTC 2 cut(s) 869, 1149
Eam1105I GACNNNNNGTC 1 cut(s) 1300
EarI CTCTTC 2 cut(s) 869, 1149
Ecl136II GAGCTC 2 cut(s) 909, 1603
EclXI CGGCCG 1 cut(s) 1802
Eco147I AGGCCT 1 cut(s) 1775
Eco24I GRGCYC 3 cut(s) 234, 911, 1605
Eco31I GGTCTC 1 cut(s) 1151
Eco32I GATATC 1 cut(s) 1819
Eco47I GGWCC 1 cut(s) 623
Eco52I CGGCCG 1 cut(s) 1802
Eco53kI GAGCTC 2 cut(s) 909, 1603
Eco57I CTGAAG 1 cut(s) 615
EcoICRI GAGCTC 2 cut(s) 909, 1603
EcoO109I RGGNCCY 1 cut(s) 858
EcoRV GATATC 1 cut(s) 1819
EcoT38I GRGCYC 3 cut(s) 234, 911, 1605
FaeI CATG 8 cut(s) 343, 924, 987, 1169, 1407, 1550, 1714, 1825
FalI AAGNNNNNCTT 2 cut(s) 469, 501
FaqI GGGAC 2 cut(s) 415, 1307
FatI CATG 8 cut(s) 339, 920, 983, 1165, 1403, 1546, 1710, 1821
FauI CCCGC 1 cut(s) 174
FbaI TGATCA 1 cut(s) 1134
FblI GTMKAC 1 cut(s) 153
Fnu4HI GCNGC 3 cut(s) 825, 1285, 1721
FokI GGATG 2 cut(s) 1533, 1799
FriOI GRGCYC 3 cut(s) 234, 911, 1605
Fsp4HI GCNGC 3 cut(s) 825, 1285, 1721
FspBI CTAG 6 cut(s) 504, 701, 1305, 1415, 1428, 1674
GluI GCNGC 3 cut(s) 825, 1285, 1721
GsuI CTGGAG 4 cut(s) 663, 699, 872, 1745
HaeIII GGCC 4 cut(s) 608, 860, 1775, 1804
HapII CCGG 2 cut(s) 951, 995
Hin1II CATG 8 cut(s) 343, 924, 987, 1169, 1407, 1550, 1714, 1825
HindIII AAGCTT 1 cut(s) 443
HinfI GANTC 3 cut(s) 212, 704, 1646
HpaII CCGG 2 cut(s) 951, 995
Hpy166II GTNNAC 2 cut(s) 154, 1409
Hpy188III TCNNGA 9 cut(s) 105, 416, 491, 593, 722, 995, 1051, 1207, 1822
Hpy8I GTNNAC 2 cut(s) 154, 1409
Hpy99I CGWCG 1 cut(s) 1341
HpyAV CCTTC 9 cut(s) 261, 383, 542, 849, 1410, 1499, 1550, 1558, 1673
HpyCH4III ACNGT 7 cut(s) 181, 299, 637, 655, 757, 931, 1388
HpyCH4V TGCA 9 cut(s) 117, 138, 824, 836, 1409, 1529, 1546, 1580, 1742
HpyF10VI GCNNNNNNNGC 6 cut(s) 86, 99, 266, 833, 1284, 1766
Hsp92II CATG 8 cut(s) 343, 924, 987, 1169, 1407, 1550, 1714, 1825
Kpn2I TCCGGA 1 cut(s) 994
Ksp22I TGATCA 1 cut(s) 1134
Kzo9I GATC 4 cut(s) 64, 1134, 1496, 1714
LmnI GCTCC 3 cut(s) 724, 891, 1704
Lsp1109I GCAGC 3 cut(s) 836, 1271, 1732
LweI GCATC 5 cut(s) 76, 208, 594, 1134, 1342
MaeI CTAG 6 cut(s) 504, 701, 1305, 1415, 1428, 1674
MaeIII GTNAC 2 cut(s) 529, 1441
MalI GATC 4 cut(s) 66, 1136, 1498, 1716
MboI GATC 4 cut(s) 64, 1134, 1496, 1714
MboII GAAGA 8 cut(s) 608, 722, 787, 886, 1055, 1088, 1166, 1491
MflI RGATCY 2 cut(s) 1496, 1714
MhlI GDGCHC 5 cut(s) 234, 676, 911, 1411, 1605
MluCI AATT 9 cut(s) 37, 130, 779, 831, 843, 915, 975, 1450, 1655
MlyI GAGTC 2 cut(s) 206, 1655
MmeI TCCRAC 2 cut(s) 92, 758
MroI TCCGGA 1 cut(s) 994
MseI TTAA 8 cut(s) 41, 447, 612, 686, 759, 830, 863, 945
MslI CAYNNNNRTG 2 cut(s) 770, 1439
MspA1I CMGCKG 1 cut(s) 1723
MspCI CTTAAG 1 cut(s) 446
MspI CCGG 2 cut(s) 951, 995
MwoI GCNNNNNNNGC 6 cut(s) 86, 99, 266, 833, 1284, 1766
NdeII GATC 4 cut(s) 64, 1134, 1496, 1714
NheI GCTAGC 2 cut(s) 503, 1673
NlaIII CATG 8 cut(s) 343, 924, 987, 1169, 1407, 1550, 1714, 1825
NlaIV GGNNCC 1 cut(s) 1716
NmuCI GTSAC 2 cut(s) 529, 1441
NspV TTCGAA 3 cut(s) 185, 387, 1469
OliI CACNNNNGTG 1 cut(s) 770
PagI TCATGA 1 cut(s) 1821
PceI AGGCCT 1 cut(s) 1775
PfeI GAWTC 1 cut(s) 704
PflMI CCANNNNNTGG 1 cut(s) 1280
PkrI GCNGC 3 cut(s) 826, 1286, 1722
PleI GAGTC 2 cut(s) 206, 1654
PpsI GAGTC 2 cut(s) 206, 1654
PshBI ATTAAT 1 cut(s) 830
PsiI TTATAA 1 cut(s) 842
Psp124BI GAGCTC 2 cut(s) 911, 1605
PspN4I GGNNCC 1 cut(s) 1716
PspPI GGNCC 3 cut(s) 606, 623, 858
PsrI GAACNNNNNNTAC 2 cut(s) 1010, 1042
PstNI CAGNNNCTG 3 cut(s) 722, 797, 1559
PsuI RGATCY 2 cut(s) 1496, 1714
PvuII CAGCTG 1 cut(s) 1723
RsaI GTAC 5 cut(s) 457, 524, 1179, 1393, 1538
RsaNI GTAC 5 cut(s) 456, 523, 1178, 1392, 1537
RseI CAYNNNNRTG 2 cut(s) 770, 1439
SacI GAGCTC 2 cut(s) 911, 1605
SaqAI TTAA 8 cut(s) 41, 447, 612, 686, 759, 830, 863, 945
SatI GCNGC 3 cut(s) 825, 1285, 1721
Sau3AI GATC 4 cut(s) 64, 1134, 1496, 1714
Sau96I GGNCC 3 cut(s) 606, 623, 858
SchI GAGTC 2 cut(s) 206, 1655
SduI GDGCHC 5 cut(s) 234, 676, 911, 1411, 1605
SfaNI GCATC 5 cut(s) 76, 208, 594, 1134, 1342
SfcI CTRYAG 3 cut(s) 1033, 1102, 1365
SfuI TTCGAA 3 cut(s) 185, 387, 1469
SinI GGWCC 1 cut(s) 623
SmiMI CAYNNNNRTG 2 cut(s) 770, 1439
SmlI CTYRAG 7 cut(s) 103, 398, 446, 667, 1288, 1325, 1598
SmoI CTYRAG 7 cut(s) 103, 398, 446, 667, 1288, 1325, 1598
Sse9I AATT 9 cut(s) 37, 130, 779, 831, 843, 915, 975, 1450, 1655
SseBI AGGCCT 1 cut(s) 1775
SsiI CCGC 3 cut(s) 167, 1147, 1718
SspI AATATT 3 cut(s) 59, 317, 1474
SspMI CTAG 6 cut(s) 504, 701, 1305, 1415, 1428, 1674
SstI GAGCTC 2 cut(s) 911, 1605
StuI AGGCCT 1 cut(s) 1775
TaaI ACNGT 7 cut(s) 181, 299, 637, 655, 757, 931, 1388
TaqI TCGA 7 cut(s) 185, 387, 1336, 1356, 1469, 1692, 1812
TasI AATT 9 cut(s) 37, 130, 779, 831, 843, 915, 975, 1450, 1655
TatI WGTACW 2 cut(s) 1177, 1391
TfiI GAWTC 1 cut(s) 704
Tru1I TTAA 8 cut(s) 41, 447, 612, 686, 759, 830, 863, 945
Tru9I TTAA 8 cut(s) 41, 447, 612, 686, 759, 830, 863, 945
TscAI CASTG 1 cut(s) 1391
TseFI GTSAC 2 cut(s) 529, 1441
TseI GCWGC 3 cut(s) 824, 1284, 1720
Tsp45I GTSAC 2 cut(s) 529, 1441
TspDTI ATGAA 7 cut(s) 10, 909, 969, 1089, 1392, 1699, 1838
TspRI CASTG 1 cut(s) 1391
Van91I CCANNNNNTGG 1 cut(s) 1280
Vha464I CTTAAG 1 cut(s) 446
VneI GTGCAC 1 cut(s) 1407
VpaK11BI GGWCC 1 cut(s) 623
VspI ATTAAT 1 cut(s) 830
XapI RAATTY 3 cut(s) 37, 130, 1655
XcmI CCANNNNNNNNNTGG 1 cut(s) 1657
XmiI GTMKAC 1 cut(s) 153
XspI CTAG 6 cut(s) 504, 701, 1305, 1415, 1428, 1674
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.