Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0011547

Physical Location & Seq

Genomic Coordinates Forward (+)

27269037 .. 27270902

Gene Structure 1866 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00022160.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1866 bp

ATGATTTTTCTCTGGTTCTTCATCTTGGTTTGCCTAAATTCAAGCCATGCTCAACAGTACTATGACCAATCCGAGTGTCCTTCCAATATCAGCTACCCCGGTTCTAGATACACTTGCAATATGTTCCAGAATTCATGCAGCACCTATGTGGTATACAGAGCCAACCAACATTTCCAGACTATTGCAAATATATCAGACTTGTTTCACATGGACTCTGATGCAATGCTTAGACTCAACAAACTTACATCTCCTTCTGATGTGCTTAAACCAGGTAGAGAAGTTCTCATCCCCATCAACTGTTCTTGCTCAGGTCAATATTTTCAGGCAAGTTTCAGCTACATGGTGTCCGAAAAGACATCATACTCCGAGATAGCTTGCGGAGTTTTTGAAGGCTTACTCAAGTCCTCTACACTTACCAAGGAAAACTCGGTTCAAGTCATCAACGTTGGTGCTGAGCTTCGTGTGCCTCTAAGATGTGCTTGTCCTGATAACTTAGCTAGTAAGGAAGGAGTGAAGTATTTTGTGACATACCCTCTCATCGAAGGAGATGTACCAATCCTGTTGAGTAAGAGGTTCGGCATCTCTCCAGAAGATTTATGGTTAGTCAATAATTTAGTGCCACCAAATCCAACTGTTTTTCCAAACACAACTATTTTAGTTCCCTTGAGAGAACCTCCGGTTCTGAACTTCAATATTCCAGATTCTCCACCTCCAGCTCCTGGATTTCTTCCCACAATTTCTGTCGTAAAGCCGAATAACAGCACAAGACTAAGGAGTTTGTATATAGCAGGGTCTGTTGTTGGGTTTTCATTACTCCTTTTAGCATTGATTGCATATGTAGTTTTGTATAGGAGGGCCTTAAAGAAGTGGAAGACTGAGAAGTCGCACTTCTTTAATGCTAGAAGCTCTCCACTTTCAATTTCAACAGTCAGAAGTCCTCTCAAATCCAGTCTAACGGGTAGATCAAGCTCTCGAATGTCGACATGTTTATCTCCTGATATTCTTGCTGGATTAAAGTATTCTTTGTTCAACTACAGCATAGAAGAGATCAGGAAAGCAACAAGGGATTTCAATGAAGAGAACAAGACTGGTGCTCTAGTCTATCGAGGGGTGATAAACAATGCTGAAGTGATGATCAAGCAGATGACATTTGTCGAAACAAGCCATGTTATAGATGTCCATTCCAAAATCAACCACATCAATATCTTGAACTTGGAGGGTGTTTCTTATGGAGAAAGTGACTTGTCCTGGTCATATCTAGTGTTTGAGCTTCCCAGCAATGACTGCTTGAGGGATTGCTTGTCTCATACATCTAATCCTCTTGAGTGGTCTCGGCGAACACAAATAGCTTTTGATATTGCCACAGGACTTCACTATTTGCACTGCTGTACTTTCCCTTCCTATGCTCACCTAAACATAAACAGTAGAAATATTTTTGTAACAGAAAATTGGAGGGCCAAACTTGCAAATATCGGAACTCTCTCTGCATTGGGATCTTCCGAAAACAAAGGATGGGTTGCACCGGAGTACCTTCTATACGGCTCAGCTTCTGAAAAAGTGGATATTTTTGCTTTTGGGGTCGTTTTGCTGGAGCTCATCTCAGCCAGAGAGGACATCGATGGGATGTTATTTAAGGAATCCATCAAATTTTTAGGAGGGGGTGATAGTGAAGGAGGTTTCCTCGAGCAGCTTAGGAGCTTCATGGATCAACAGTTAGAAGATTACCCTCTTGCAGAGGCTCTGTGTTTGGCTGTTTTAGCCAAGGCATGTGTGGAGGATGATCCTCTCCACAGGCCATCGATCGATGATATCATTAAAGTCCTTGCCAGAATGGTAGGACCAGAAGTCGATCGTCACGTTTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase_Tyr

Protein Analysis

621

Amino Acids

69.43

Weight (kDa)

6.05

Isoelectric Point (pI)

55.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	45 - 102	9.7e-21	NFP/LYK LysM1 domain
LysM2_CERK1_LYK3_4_5	PF23472	106 - 158	6.3e-16	LYK3/4/5 LysM2 domain
PK_Tyr_Ser-Thr	PF07714	388 - 606	3.8e-22	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	391 - 541	2.4e-15	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0011547)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g31710
malus_domestica	MD00G1205900.v1.1 MD03G1121700.v1.1 MD11G1140300.v1.1 MD11G1140400.v1.1
prunus_persica	Prupe.6G104800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0058401
rosa_laevigata	RLG00000035042 RLG00000035217
rosa_multiflora	Rmu_sc0000367.1_g000110
rosa_roxburghii	Rroxscaffold_1G00022160 Rroxscaffold_1G00024260
rosa_rugosa	Rorug05G0313600.1
rosa_samantha	Rh5AG381100 Rh5BG378700 Rh5BG392700 Rh5CG416800 Rh5DG407900
rosa_wichuraiana	Rw5G034550 Rw5G035910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	880
AccB7I	CCANNNNNTGG	1 cut(s)	719
AccI	GTMKAC	2 cut(s)	153, 980
AciI	CCGC	1 cut(s)	378
AclI	AACGTT	1 cut(s)	444
AclWI	GGATC	3 cut(s)	1501, 1713, 1775
AcsI	RAATTY	3 cut(s)	37, 130, 1646
AcuI	CTGAAG	1 cut(s)	1146
AfaI	GTAC	4 cut(s)	59, 552, 1390, 1529
AfiI	CCNNNNNNNGG	1 cut(s)	719
AflIII	ACRYGT	1 cut(s)	983
AgsI	TTSAA	9 cut(s)	42, 389, 434, 691, 918, 924, 1030, 1072, 1210
AhdI	GACNNNNNGTC	1 cut(s)	1844
AjnI	CCWGG	3 cut(s)	268, 718, 1247
AjuI	GAANNNNNNNTTGG	2 cut(s)	155, 187
AleI	CACNNNNGTG	1 cut(s)	146
Alw21I	GWGCWC	2 cut(s)	1096, 1596
Alw26I	GTCTC	2 cut(s)	1308, 1335
AlwI	GGATC	3 cut(s)	1501, 1713, 1775
AlwNI	CAGNNNCTG	3 cut(s)	719, 794, 1550
Ama87I	CYCGRG	1 cut(s)	1682
AoxI	GGCC	3 cut(s)	855, 1455, 1793
ApeKI	GCWGC	2 cut(s)	138, 1687
ApoI	RAATTY	3 cut(s)	37, 130, 1646
AspS9I	GGNCC	3 cut(s)	855, 1455, 1838
AsuC2I	CCSGG	1 cut(s)	99
AsuHPI	GGTGA	3 cut(s)	1123, 1400, 1673
AvaI	CYCGRG	1 cut(s)	1682
AvaII	GGWCC	1 cut(s)	1838
BaeI	ACNNNNGTAYC	2 cut(s)	1511, 1544
BanII	GRGCYC	1 cut(s)	1596
BarI	GAAGNNNNNNTAC	4 cut(s)	534, 566, 1381, 1413
BbsI	GAAGAC	1 cut(s)	878
Bbv12I	GWGCWC	2 cut(s)	1096, 1596
BbvI	GCAGC	2 cut(s)	150, 1699
BccI	CCATC	5 cut(s)	299, 1506, 1613, 1649, 1804
BceAI	ACGGC	1 cut(s)	1555
BciT130I	CCWGG	3 cut(s)	270, 720, 1249
BclI	TGATCA	1 cut(s)	1134
BcnI	CCSGG	1 cut(s)	99
BcoDI	GTCTC	2 cut(s)	1308, 1335
BfaI	CTAG	5 cut(s)	105, 498, 900, 1097, 1259
BfmI	CTRYAG	1 cut(s)	1033
BisI	GCNGC	2 cut(s)	139, 1688
BlpI	GCTNAGC	2 cut(s)	453, 1543
BlsI	GCNGC	2 cut(s)	140, 1689
BmcAI	AGTACT	1 cut(s)	59
Bme1390I	CCNGG	4 cut(s)	99, 270, 720, 1249
Bme18I	GGWCC	1 cut(s)	1838
BmeRI	GACNNNNNGTC	1 cut(s)	1844
BmeT110I	CYCGRG	1 cut(s)	1682
BmgT120I	GGNCC	3 cut(s)	855, 1455, 1838
BmrFI	CCNGG	4 cut(s)	99, 270, 720, 1249
BmsI	GCATC	2 cut(s)	208, 588
BoxI	GACNNNNGTC	1 cut(s)	1151
BpiI	GAAGAC	1 cut(s)	878
BplI	GAGNNNNNCTC	8 cut(s)	267, 299, 658, 690, 1583, 1615, 1665, 1697
BpmI	CTGGAG	3 cut(s)	570, 696, 1610
Bpu10I	CCTNAGC	2 cut(s)	307, 1691
Bpu1102I	GCTNAGC	2 cut(s)	453, 1543
BpuEI	CTTGAG	4 cut(s)	383, 685, 1309, 1343
BpuMI	CCSGG	1 cut(s)	99
Bsa29I	ATCGAT	3 cut(s)	1617, 1799, 1803
BsaI	GGTCTC	1 cut(s)	1335
BsaJI	CCNNGG	3 cut(s)	97, 417, 1761
BsaWI	WCCGGW	2 cut(s)	676, 1522
Bsc4I	CCNNNNNNNGG	1 cut(s)	719
Bse1I	ACTGG	2 cut(s)	948, 1093
Bse3DI	GCAATG	2 cut(s)	228, 1285
BseBI	CCWGG	3 cut(s)	270, 720, 1249
BseCI	ATCGAT	3 cut(s)	1617, 1799, 1803
BseDI	CCNNGG	3 cut(s)	97, 417, 1761
BseGI	GGATG	4 cut(s)	285, 1517, 1629, 1783
BseLI	CCNNNNNNNGG	1 cut(s)	719
BseMI	GCAATG	2 cut(s)	228, 1285
BseMII	CTCAG	5 cut(s)	321, 444, 867, 1557, 1614
BseNI	ACTGG	2 cut(s)	948, 1093
BseXI	GCAGC	2 cut(s)	150, 1699
BseYI	CCCAGC	1 cut(s)	1274
Bsh1285I	CGRYCG	2 cut(s)	1803, 1852
BshFI	GGCC	3 cut(s)	857, 1457, 1795
BshVI	ATCGAT	3 cut(s)	1617, 1799, 1803
BsiEI	CGRYCG	2 cut(s)	1803, 1852
BsiHKAI	GWGCWC	2 cut(s)	1096, 1596
BsiHKCI	CYCGRG	1 cut(s)	1682
BsiSI	CCGG	3 cut(s)	99, 677, 1523
BslI	CCNNNNNNNGG	1 cut(s)	719
BsmAI	GTCTC	2 cut(s)	1308, 1335
BsnI	GGCC	3 cut(s)	857, 1457, 1795
Bso31I	GGTCTC	1 cut(s)	1335
BsoBI	CYCGRG	1 cut(s)	1682
Bsp1286I	GDGCHC	2 cut(s)	1096, 1596
Bsp143I	GATC	8 cut(s)	962, 1047, 1134, 1493, 1705, 1780, 1800, 1849
Bsp1720I	GCTNAGC	2 cut(s)	453, 1543
BspACI	CCGC	1 cut(s)	378
BspANI	GGCC	3 cut(s)	857, 1457, 1795
BspCNI	CTCAG	5 cut(s)	320, 445, 868, 1556, 1613
BspDI	ATCGAT	3 cut(s)	1617, 1799, 1803
BspPI	GGATC	3 cut(s)	1501, 1713, 1775
BspTNI	GGTCTC	1 cut(s)	1335
BsrDI	GCAATG	2 cut(s)	228, 1285
BsrI	ACTGG	2 cut(s)	948, 1093
BssECI	CCNNGG	3 cut(s)	97, 417, 1761
BssMI	GATC	8 cut(s)	962, 1047, 1134, 1493, 1705, 1780, 1800, 1849
BssNAI	GTATAC	1 cut(s)	154
BssT1I	CCWWGG	2 cut(s)	417, 1761
Bst1107I	GTATAC	1 cut(s)	154
Bst2UI	CCWGG	3 cut(s)	270, 720, 1249
Bst4CI	ACNGT	6 cut(s)	57, 299, 634, 928, 1424, 1713
Bst6I	CTCTTC	2 cut(s)	1038, 1071
BstAPI	GCANNNNNTGC	2 cut(s)	830, 1284
BstC8I	GCNNGC	1 cut(s)	376
BstF5I	GGATG	4 cut(s)	285, 1517, 1629, 1783
BstKTI	GATC	8 cut(s)	965, 1050, 1137, 1496, 1708, 1783, 1803, 1852
BstMAI	GTCTC	2 cut(s)	1308, 1335
BstMBI	GATC	8 cut(s)	962, 1047, 1134, 1493, 1705, 1780, 1800, 1849
BstMCI	CGRYCG	2 cut(s)	1803, 1852
BstMWI	GCNNNNNNNGC	5 cut(s)	463, 830, 1284, 1463, 1757
BstNI	CCWGG	3 cut(s)	270, 720, 1249
BstNSI	RCATGY	2 cut(s)	987, 1770
BstPAI	GACNNNNGTC	1 cut(s)	1151
BstSCI	CCNGG	4 cut(s)	97, 268, 718, 1247
BstSFI	CTRYAG	1 cut(s)	1033
BstV1I	GCAGC	2 cut(s)	150, 1699
BstV2I	GAAGAC	1 cut(s)	878
BstX2I	RGATCY	1 cut(s)	1493
BstYI	RGATCY	1 cut(s)	1493
BstZ17I	GTATAC	1 cut(s)	154
Bsu15I	ATCGAT	3 cut(s)	1617, 1799, 1803
BsuRI	GGCC	3 cut(s)	857, 1457, 1795
BsuTUI	ATCGAT	3 cut(s)	1617, 1799, 1803
BtsCI	GGATG	4 cut(s)	285, 1517, 1629, 1783
BtsI	GCAGTG	1 cut(s)	1381
BtsIMutI	CAGTG	1 cut(s)	1381
Cac8I	GCNNGC	1 cut(s)	376
CaiI	CAGNNNCTG	3 cut(s)	719, 794, 1550
Cfr13I	GGNCC	3 cut(s)	855, 1455, 1838
ClaI	ATCGAT	3 cut(s)	1617, 1799, 1803
CsiI	ACCWGGT	1 cut(s)	268
Csp6I	GTAC	4 cut(s)	58, 551, 1389, 1528
CviAII	CATG	8 cut(s)	47, 135, 208, 340, 984, 1166, 1702, 1767
CviQI	GTAC	4 cut(s)	58, 551, 1389, 1528
DpnI	GATC	8 cut(s)	964, 1049, 1136, 1495, 1707, 1782, 1802, 1851
DpnII	GATC	8 cut(s)	962, 1047, 1134, 1493, 1705, 1780, 1800, 1849
DrdI	GACNNNNNNGTC	1 cut(s)	880
DriI	GACNNNNNGTC	1 cut(s)	1844
DseDI	GACNNNNNNGTC	1 cut(s)	880
Eam1104I	CTCTTC	2 cut(s)	1038, 1071
Eam1105I	GACNNNNNGTC	1 cut(s)	1844
EarI	CTCTTC	2 cut(s)	1038, 1071
Ecl136II	GAGCTC	1 cut(s)	1594
Eco130I	CCWWGG	2 cut(s)	417, 1761
Eco24I	GRGCYC	1 cut(s)	1596
Eco31I	GGTCTC	1 cut(s)	1335
Eco32I	GATATC	1 cut(s)	1810
Eco47I	GGWCC	1 cut(s)	1838
Eco53kI	GAGCTC	1 cut(s)	1594
Eco57I	CTGAAG	1 cut(s)	1146
Eco88I	CYCGRG	1 cut(s)	1682
EcoICRI	GAGCTC	1 cut(s)	1594
EcoO109I	RGGNCCY	1 cut(s)	855
EcoRI	GAATTC	1 cut(s)	130
EcoRII	CCWGG	3 cut(s)	268, 718, 1247
EcoRV	GATATC	1 cut(s)	1810
EcoT14I	CCWWGG	2 cut(s)	417, 1761
EcoT38I	GRGCYC	1 cut(s)	1596
ErhI	CCWWGG	2 cut(s)	417, 1761
FaeI	CATG	8 cut(s)	50, 138, 211, 343, 987, 1169, 1705, 1770
FalI	AAGNNNNNCTT	4 cut(s)	463, 495, 872, 904
FatI	CATG	8 cut(s)	46, 134, 207, 339, 983, 1165, 1701, 1766
FauNDI	CATATG	1 cut(s)	835
FbaI	TGATCA	1 cut(s)	1134
FblI	GTMKAC	2 cut(s)	153, 980
Fnu4HI	GCNGC	2 cut(s)	139, 1688
FokI	GGATG	4 cut(s)	272, 1524, 1636, 1790
FriOI	GRGCYC	1 cut(s)	1596
Fsp4HI	GCNGC	2 cut(s)	139, 1688
FspBI	CTAG	5 cut(s)	105, 498, 900, 1097, 1259
GluI	GCNGC	2 cut(s)	139, 1688
GsaI	CCCAGC	1 cut(s)	1278
GsuI	CTGGAG	3 cut(s)	570, 696, 1610
HaeIII	GGCC	3 cut(s)	857, 1457, 1795
HapII	CCGG	3 cut(s)	99, 677, 1523
Hin1II	CATG	8 cut(s)	50, 138, 211, 343, 987, 1169, 1705, 1770
HincII	GTYRAC	1 cut(s)	981
HindII	GTYRAC	1 cut(s)	981
HinfI	GANTC	4 cut(s)	212, 231, 701, 1637
HpaII	CCGG	3 cut(s)	99, 677, 1523
HphI	GGTGA	3 cut(s)	1123, 1400, 1673
Hpy166II	GTNNAC	2 cut(s)	154, 981
Hpy8I	GTNNAC	2 cut(s)	154, 981
HpyAV	CCTTC	8 cut(s)	90, 261, 383, 500, 536, 1407, 1541, 1664
HpyCH4III	ACNGT	6 cut(s)	57, 299, 634, 928, 1424, 1713
HpyCH4IV	ACGT	2 cut(s)	444, 1857
HpyF10VI	GCNNNNNNNGC	5 cut(s)	463, 830, 1284, 1463, 1757
HpySE526I	ACGT	2 cut(s)	444, 1857
Hsp92II	CATG	8 cut(s)	50, 138, 211, 343, 987, 1169, 1705, 1770
Ksp22I	TGATCA	1 cut(s)	1134
Kzo9I	GATC	8 cut(s)	962, 1047, 1134, 1493, 1705, 1780, 1800, 1849
LmnI	GCTCC	3 cut(s)	721, 1591, 1695
Lsp1109I	GCAGC	2 cut(s)	150, 1699
LweI	GCATC	2 cut(s)	208, 588
MabI	ACCWGGT	1 cut(s)	268
MaeI	CTAG	5 cut(s)	105, 498, 900, 1097, 1259
MaeII	ACGT	2 cut(s)	444, 1857
MaeIII	GTNAC	4 cut(s)	523, 1238, 1438, 1853
MalI	GATC	8 cut(s)	964, 1049, 1136, 1495, 1707, 1782, 1802, 1851
MboI	GATC	8 cut(s)	962, 1047, 1134, 1493, 1705, 1780, 1800, 1849
MboII	GAAGA	8 cut(s)	10, 602, 719, 883, 1055, 1088, 1488, 1730
MflI	RGATCY	1 cut(s)	1493
MhlI	GDGCHC	2 cut(s)	1096, 1596
MluCI	AATT	7 cut(s)	37, 130, 610, 735, 918, 1447, 1646
MlyI	GAGTC	2 cut(s)	206, 225
MmeI	TCCRAC	1 cut(s)	653
MseI	TTAA	6 cut(s)	264, 860, 894, 1013, 1632, 1815
MslI	CAYNNNNRTG	1 cut(s)	146
MspI	CCGG	3 cut(s)	99, 677, 1523
MspR9I	CCNGG	4 cut(s)	99, 270, 720, 1249
MvaI	CCWGG	3 cut(s)	270, 720, 1249
MwoI	GCNNNNNNNGC	5 cut(s)	463, 830, 1284, 1463, 1757
NciI	CCSGG	1 cut(s)	99
NdeI	CATATG	1 cut(s)	835
NdeII	GATC	8 cut(s)	962, 1047, 1134, 1493, 1705, 1780, 1800, 1849
NlaIII	CATG	8 cut(s)	50, 138, 211, 343, 987, 1169, 1705, 1770
NmeAIII	GCCGAG	1 cut(s)	1312
NmuCI	GTSAC	3 cut(s)	523, 1238, 1853
NspI	RCATGY	2 cut(s)	987, 1770
OliI	CACNNNNGTG	1 cut(s)	146
PaeR7I	CTCGAG	1 cut(s)	1682
PciI	ACATGT	1 cut(s)	983
PcsI	WCGNNNNNNNCGW	1 cut(s)	1854
PfeI	GAWTC	2 cut(s)	701, 1637
PflMI	CCANNNNNTGG	1 cut(s)	719
PfoI	TCCNGGA	1 cut(s)	718
PkrI	GCNGC	2 cut(s)	140, 1689
Ple19I	CGATCG	2 cut(s)	1803, 1852
PleI	GAGTC	2 cut(s)	206, 225
PpsI	GAGTC	2 cut(s)	206, 225
PscI	ACATGT	1 cut(s)	983
PshAI	GACNNNNGTC	1 cut(s)	1151
Psp124BI	GAGCTC	1 cut(s)	1596
Psp1406I	AACGTT	1 cut(s)	444
Psp6I	CCWGG	3 cut(s)	268, 718, 1247
PspFI	CCCAGC	1 cut(s)	1274
PspGI	CCWGG	3 cut(s)	268, 718, 1247
PspPI	GGNCC	3 cut(s)	855, 1455, 1838
PspXI	VCTCGAGB	1 cut(s)	1682
PsrI	GAACNNNNNNTAC	2 cut(s)	1010, 1042
PstNI	CAGNNNCTG	3 cut(s)	719, 794, 1550
PsuI	RGATCY	1 cut(s)	1493
PvuI	CGATCG	2 cut(s)	1803, 1852
RsaI	GTAC	4 cut(s)	59, 552, 1390, 1529
RsaNI	GTAC	4 cut(s)	58, 551, 1389, 1528
RseI	CAYNNNNRTG	1 cut(s)	146
SacI	GAGCTC	1 cut(s)	1596
SalI	GTCGAC	1 cut(s)	979
SaqAI	TTAA	6 cut(s)	264, 860, 894, 1013, 1632, 1815
SatI	GCNGC	2 cut(s)	139, 1688
Sau3AI	GATC	8 cut(s)	962, 1047, 1134, 1493, 1705, 1780, 1800, 1849
Sau96I	GGNCC	3 cut(s)	855, 1455, 1838
ScaI	AGTACT	1 cut(s)	59
SchI	GAGTC	2 cut(s)	206, 225
ScrFI	CCNGG	4 cut(s)	99, 270, 720, 1249
SduI	GDGCHC	2 cut(s)	1096, 1596
SexAI	ACCWGGT	1 cut(s)	268
SfaNI	GCATC	2 cut(s)	208, 588
SfcI	CTRYAG	1 cut(s)	1033
Sfr274I	CTCGAG	1 cut(s)	1682
SinI	GGWCC	1 cut(s)	1838
SlaI	CTCGAG	1 cut(s)	1682
SmiMI	CAYNNNNRTG	1 cut(s)	146
SmlI	CTYRAG	5 cut(s)	398, 664, 1288, 1322, 1682
SmoI	CTYRAG	5 cut(s)	398, 664, 1288, 1322, 1682
Sse9I	AATT	7 cut(s)	37, 130, 610, 735, 918, 1447, 1646
SsiI	CCGC	1 cut(s)	378
SspI	AATATT	3 cut(s)	317, 694, 1432
SspMI	CTAG	5 cut(s)	105, 498, 900, 1097, 1259
SstI	GAGCTC	1 cut(s)	1596
StyD4I	CCNGG	4 cut(s)	97, 268, 718, 1247
StyI	CCWWGG	2 cut(s)	417, 1761
TaaI	ACNGT	6 cut(s)	57, 299, 634, 928, 1424, 1713
TaiI	ACGT	2 cut(s)	447, 1860
TasI	AATT	7 cut(s)	37, 130, 610, 735, 918, 1447, 1646
TatI	WGTACW	2 cut(s)	57, 1388
TfiI	GAWTC	2 cut(s)	701, 1637
Tru1I	TTAA	6 cut(s)	264, 860, 894, 1013, 1632, 1815
Tru9I	TTAA	6 cut(s)	264, 860, 894, 1013, 1632, 1815
TscAI	CASTG	1 cut(s)	1388
TseFI	GTSAC	3 cut(s)	523, 1238, 1853
TseI	GCWGC	2 cut(s)	138, 1687
Tsp45I	GTSAC	3 cut(s)	523, 1238, 1853
TspDTI	ATGAA	5 cut(s)	10, 123, 798, 1089, 1690
TspRI	CASTG	1 cut(s)	1388
Van91I	CCANNNNNTGG	1 cut(s)	719
VpaK11BI	GGWCC	1 cut(s)	1838
XapI	RAATTY	3 cut(s)	37, 130, 1646
XbaI	TCTAGA	1 cut(s)	104
XceI	RCATGY	2 cut(s)	987, 1770
XcmI	CCANNNNNNNNNTGG	2 cut(s)	594, 1768
XhoI	CTCGAG	1 cut(s)	1682
XmiI	GTMKAC	2 cut(s)	153, 980
XspI	CTAG	5 cut(s)	105, 498, 900, 1097, 1259
ZrmI	AGTACT	1 cut(s)	59

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.