Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0011547

Physical Location & Seq

Genomic Coordinates Reverse (-)

62984080 .. 62986872

Gene Structure 2793 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG392700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGTACCAAATTTTGATATCAGGAACCATGATTTTTCTCTGGTTCTTCATCTTGGTTTGCCTAAATTCAAGCCATGCTCAACAGTACTATGACCAATCCGAGTGTCCTTCCAATATCAGCTACCCCGGTTCTAGATACACTTGCAATATGTTCCAGAATTCATGCAGCACCTATGTGGTATACAGAGCCAACCAACATTTCCAGACTATTGCAAATATCTCAGACTTGTTTCACATGGACTCTGATGCAATGCTTAGACTCAACAATCTTACATCTCCTTCTGATGTGCTCAAACCAGGTAGAGAAGTTCTCATCCCCATCAATTGTTCTTGCTCAGGTCAATATTTTCAGGCAAGTTTCAGCTACATGGTGTCCGAAAAGACATCATACTCCGAGATAGCTTGCGGAGTTTTTGAAGGCTTACTCAAGTCCTCTACACTTACCAAGGAAAACTCGGTTCAAGTCATCAACGTTGGTGCTGAGCTTCGTGTGCCTCTAAGATGTGCTTGTCCTGATAACTTAGCTAGTAAGAAAGGAGTGAAGTATCTTGTGACATACCCTTTCATCGAAGGAGATGTACCAATCCTGTTGAGTAAGAGGTTCGGCATCTCTCCAGAAGATTTATGGTTAGTCAATAATTTAGAGCCACCAAATCCAACTGTATTTCCAAACACAACTATTTTAGTTCCCTTGAGAGAACCACCGGTTCTGAACTTCAATATTCCATATTCTCCACCTCCAGCTCCTGGTTTTCTTCCCACAATTTCTGTCGTAAAGCCGAATAACAGCACAAGACTAAGGAGTTTGTATATAGCAGGGTCTGTTGTTGGGTTTTCACTACTGCTTTTAGCATTGATTGCATGTGCAGTTTTGTATAGGAGGGCCTTAAAGAAGTGGAAGCCTGAGAAGTGGCACTCCTTTAATGCTAGAAGCTCTCCACTTTCAATTTCAACAGTCAGAAGTCCTCTCAAATCCAGTCTAACGGGTAGATCAAGCTCTCCAATGTCGACATGTTTATCTCCGGATATTCTTGCTGGATTAAAGTACTCTTTGTTCAACTACAGCATAGAAGAGATCAGGAAAGCAACAAGGGATTTCAATGAAGAGAACAAGACTGGTGCTCTAGTCTATAGAGGGGTGATAAACAATGCTGAAGTGATGATCAAGCAGATGACATTTGTCGAAACTAGCCATGTTATAGATGTCCATTCCAAAATCAACCACATCAATATCTTGAACTTGGAGGGTGTTTCTTATGGAGAAAGTGACTTGTCCTGGTCATATCTAGTGTTTGAGCTTCCCAGCAATGGCTGCTTGAGGGACTGCTTGTCTCATACATCTAATCCTCTTGAGTGGTCTCGACGAACACAAATAGCTTTTGATATTGCCACAGGACTTCACTATTTGCACTGCTGTACTTTCCCTTCCTATGCTCACCTAAACATAAACAGTAGAAATATTTTTGTAACAGAAAATTGGAGGGCCAAACTTGCAAATATCGGAACTCTTTCTGCATTGGGATCTTCCGAAAACAAAGGATGGGTTGCACCGGAGTACCTTCTATACAGCTCAGCTTCTGAAAAAGTGGATATTTTTGCTTTTGGGGTCGTTTTGCTGGAGCTCATCTCAGCCAGAGAGGACATCGATGGGAAGTTATTTAAGGAATCCATCAAATTTTTAGGAGGGGAAGATAGTGAAGGAGGTTTCCTCGAGCAGCTAAGGAGCTTCATGGATCAACAGTTAGAAGATTACCCTCTTGCAGAGGCTCTGTGTTTGGCTGTTTTAGCCAAGGCATGTGTGGAAGATGATCCTCTCCACAGGCCATCGATCGATGATATCATTAAAGTCCTTGCCAGAATGGTAGGACCAGAAGTTGATCGTCACGTTTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase_Tyr

Protein Analysis

630

Amino Acids

70.43

Weight (kDa)

6.15

Isoelectric Point (pI)

56.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	54 - 111	2.5e-21	NFP/LYK LysM1 domain
LysM2_CERK1_LYK3_4_5	PF23472	115 - 167	6.4e-16	LYK3/4/5 LysM2 domain
LysM3_LYK4_5	PF23473	182 - 231	1.2e-06	LYK4/5 LysM3 domain
PK_Tyr_Ser-Thr	PF07714	397 - 616	3.8e-23	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	400 - 614	2.4e-16	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011547)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g31710
malus_domestica	MD00G1205900.v1.1 MD03G1121700.v1.1 MD11G1140300.v1.1 MD11G1140400.v1.1
prunus_persica	Prupe.6G104800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0058401
rosa_laevigata	RLG00000035042 RLG00000035217
rosa_multiflora	Rmu_sc0000367.1_g000110
rosa_roxburghii	Rroxscaffold_1G00022160 Rroxscaffold_1G00024260
rosa_rugosa	Rorug05G0313600.1
rosa_samantha	Rh5AG381100 Rh5BG378700 Rh5BG392700 Rh5CG416800 Rh5DG407900
rosa_wichuraiana	Rw5G034550 Rw5G035910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	746
AccI	GTMKAC	2 cut(s)	180, 1007
AccIII	TCCGGA	1 cut(s)	1021
AciI	CCGC	1 cut(s)	405
AclI	AACGTT	1 cut(s)	471
AclWI	GGATC	3 cut(s)	1528, 1740, 1802
AcsI	RAATTY	4 cut(s)	9, 64, 157, 1673
AcuI	CTGAAG	1 cut(s)	1173
AfaI	GTAC	6 cut(s)	5, 86, 579, 1046, 1417, 1556
AfiI	CCNNNNNNNGG	2 cut(s)	746, 1307
AflIII	ACRYGT	1 cut(s)	1010
AgeI	ACCGGT	1 cut(s)	703
AgsI	TTSAA	9 cut(s)	69, 416, 461, 718, 945, 951, 1057, 1099, 1237
AhdI	GACNNNNNGTC	1 cut(s)	1327
AjnI	CCWGG	3 cut(s)	295, 745, 1274
AjuI	GAANNNNNNNTTGG	2 cut(s)	182, 214
AleI	CACNNNNGTG	1 cut(s)	173
Alw21I	GWGCWC	3 cut(s)	291, 1123, 1623
Alw26I	GTCTC	2 cut(s)	1335, 1362
AlwI	GGATC	3 cut(s)	1528, 1740, 1802
AlwNI	CAGNNNCTG	3 cut(s)	746, 821, 1577
Ama87I	CYCGRG	1 cut(s)	1709
Aor13HI	TCCGGA	1 cut(s)	1021
AoxI	GGCC	3 cut(s)	882, 1482, 1820
ApeKI	GCWGC	3 cut(s)	165, 1311, 1714
ApoI	RAATTY	4 cut(s)	9, 64, 157, 1673
AsiGI	ACCGGT	1 cut(s)	703
Asp700I	GAANNNNTTC	1 cut(s)	1507
AspS9I	GGNCC	3 cut(s)	882, 1482, 1865
AsuC2I	CCSGG	1 cut(s)	126
AsuHPI	GGTGA	2 cut(s)	1150, 1427
AvaI	CYCGRG	1 cut(s)	1709
AvaII	GGWCC	1 cut(s)	1865
BaeI	ACNNNNGTAYC	2 cut(s)	1538, 1571
BanII	GRGCYC	1 cut(s)	1623
BarI	GAAGNNNNNNTAC	4 cut(s)	561, 593, 1408, 1440
Bbv12I	GWGCWC	3 cut(s)	291, 1123, 1623
BbvI	GCAGC	3 cut(s)	177, 1298, 1726
BccI	CCATC	5 cut(s)	326, 1533, 1640, 1676, 1831
BciT130I	CCWGG	3 cut(s)	297, 747, 1276
BclI	TGATCA	1 cut(s)	1161
BcnI	CCSGG	1 cut(s)	126
BcoDI	GTCTC	2 cut(s)	1335, 1362
BfaI	CTAG	6 cut(s)	132, 525, 927, 1124, 1188, 1286
BfmI	CTRYAG	2 cut(s)	1060, 1129
BisI	GCNGC	3 cut(s)	166, 1312, 1715
BlpI	GCTNAGC	2 cut(s)	480, 1570
BlsI	GCNGC	3 cut(s)	167, 1313, 1716
BmcAI	AGTACT	2 cut(s)	86, 1046
Bme1390I	CCNGG	4 cut(s)	126, 297, 747, 1276
Bme18I	GGWCC	1 cut(s)	1865
BmeRI	GACNNNNNGTC	1 cut(s)	1327
BmeT110I	CYCGRG	1 cut(s)	1709
BmgT120I	GGNCC	3 cut(s)	882, 1482, 1865
BmiI	GGNNCC	1 cut(s)	25
BmrFI	CCNGG	4 cut(s)	126, 297, 747, 1276
BmsI	GCATC	2 cut(s)	235, 615
BoxI	GACNNNNGTC	1 cut(s)	1178
BplI	GAGNNNNNCTC	6 cut(s)	294, 326, 1610, 1642, 1692, 1724
BpmI	CTGGAG	3 cut(s)	597, 723, 1637
Bpu10I	CCTNAGC	2 cut(s)	334, 1718
Bpu1102I	GCTNAGC	2 cut(s)	480, 1570
BpuEI	CTTGAG	4 cut(s)	410, 712, 1336, 1370
BpuMI	CCSGG	1 cut(s)	126
Bsa29I	ATCGAT	3 cut(s)	1644, 1826, 1830
BsaI	GGTCTC	1 cut(s)	1362
BsaJI	CCNNGG	3 cut(s)	124, 444, 1788
BsaWI	WCCGGW	3 cut(s)	703, 1021, 1549
Bsc4I	CCNNNNNNNGG	2 cut(s)	746, 1307
Bse118I	RCCGGY	1 cut(s)	703
Bse1I	ACTGG	2 cut(s)	975, 1120
Bse3DI	GCAATG	2 cut(s)	255, 1312
BseAI	TCCGGA	1 cut(s)	1021
BseBI	CCWGG	3 cut(s)	297, 747, 1276
BseCI	ATCGAT	3 cut(s)	1644, 1826, 1830
BseDI	CCNNGG	3 cut(s)	124, 444, 1788
BseGI	GGATG	2 cut(s)	312, 1544
BseLI	CCNNNNNNNGG	2 cut(s)	746, 1307
BseMI	GCAATG	2 cut(s)	255, 1312
BseMII	CTCAG	6 cut(s)	234, 348, 471, 894, 1584, 1641
BseNI	ACTGG	2 cut(s)	975, 1120
BseXI	GCAGC	3 cut(s)	177, 1298, 1726
BseYI	CCCAGC	1 cut(s)	1301
BsgI	GTGCAG	1 cut(s)	885
Bsh1285I	CGRYCG	1 cut(s)	1830
BshFI	GGCC	3 cut(s)	884, 1484, 1822
BshTI	ACCGGT	1 cut(s)	703
BshVI	ATCGAT	3 cut(s)	1644, 1826, 1830
BsiEI	CGRYCG	1 cut(s)	1830
BsiHKAI	GWGCWC	3 cut(s)	291, 1123, 1623
BsiHKCI	CYCGRG	1 cut(s)	1709
BsiSI	CCGG	4 cut(s)	126, 704, 1022, 1550
BslFI	GGGAC	1 cut(s)	1334
BslI	CCNNNNNNNGG	2 cut(s)	746, 1307
BsmAI	GTCTC	2 cut(s)	1335, 1362
BsmFI	GGGAC	1 cut(s)	1334
BsnI	GGCC	3 cut(s)	884, 1484, 1822
Bso31I	GGTCTC	1 cut(s)	1362
BsoBI	CYCGRG	1 cut(s)	1709
Bsp1286I	GDGCHC	3 cut(s)	291, 1123, 1623
Bsp13I	TCCGGA	1 cut(s)	1021
Bsp143I	GATC	8 cut(s)	989, 1074, 1161, 1520, 1732, 1807, 1827, 1876
Bsp1720I	GCTNAGC	2 cut(s)	480, 1570
BspACI	CCGC	1 cut(s)	405
BspANI	GGCC	3 cut(s)	884, 1484, 1822
BspCNI	CTCAG	6 cut(s)	233, 347, 472, 895, 1583, 1640
BspDI	ATCGAT	3 cut(s)	1644, 1826, 1830
BspEI	TCCGGA	1 cut(s)	1021
BspLI	GGNNCC	1 cut(s)	25
BspPI	GGATC	3 cut(s)	1528, 1740, 1802
BspTNI	GGTCTC	1 cut(s)	1362
BsrDI	GCAATG	2 cut(s)	255, 1312
BsrFI	RCCGGY	1 cut(s)	703
BsrI	ACTGG	2 cut(s)	975, 1120
BssAI	RCCGGY	1 cut(s)	703
BssECI	CCNNGG	3 cut(s)	124, 444, 1788
BssMI	GATC	8 cut(s)	989, 1074, 1161, 1520, 1732, 1807, 1827, 1876
BssNAI	GTATAC	1 cut(s)	181
BssT1I	CCWWGG	2 cut(s)	444, 1788
Bst1107I	GTATAC	1 cut(s)	181
Bst2UI	CCWGG	3 cut(s)	297, 747, 1276
Bst4CI	ACNGT	5 cut(s)	84, 661, 955, 1451, 1740
Bst6I	CTCTTC	2 cut(s)	1065, 1098
BstAPI	GCANNNNNTGC	2 cut(s)	857, 1311
BstC8I	GCNNGC	1 cut(s)	403
BstF5I	GGATG	2 cut(s)	312, 1544
BstKTI	GATC	8 cut(s)	992, 1077, 1164, 1523, 1735, 1810, 1830, 1879
BstMAI	GTCTC	2 cut(s)	1335, 1362
BstMBI	GATC	8 cut(s)	989, 1074, 1161, 1520, 1732, 1807, 1827, 1876
BstMCI	CGRYCG	1 cut(s)	1830
BstMWI	GCNNNNNNNGC	5 cut(s)	490, 857, 1311, 1490, 1784
BstNI	CCWGG	3 cut(s)	297, 747, 1276
BstNSI	RCATGY	3 cut(s)	864, 1014, 1797
BstPAI	GACNNNNGTC	1 cut(s)	1178
BstSCI	CCNGG	4 cut(s)	124, 295, 745, 1274
BstSFI	CTRYAG	2 cut(s)	1060, 1129
BstV1I	GCAGC	3 cut(s)	177, 1298, 1726
BstX2I	RGATCY	1 cut(s)	1520
BstYI	RGATCY	1 cut(s)	1520
BstZ17I	GTATAC	1 cut(s)	181
Bsu15I	ATCGAT	3 cut(s)	1644, 1826, 1830
BsuRI	GGCC	3 cut(s)	884, 1484, 1822
BsuTUI	ATCGAT	3 cut(s)	1644, 1826, 1830
BtsCI	GGATG	2 cut(s)	312, 1544
BtsI	GCAGTG	1 cut(s)	1408
BtsIMutI	CAGTG	1 cut(s)	1408
Cac8I	GCNNGC	1 cut(s)	403
CaiI	CAGNNNCTG	3 cut(s)	746, 821, 1577
Cfr10I	RCCGGY	1 cut(s)	703
Cfr13I	GGNCC	3 cut(s)	882, 1482, 1865
ClaI	ATCGAT	3 cut(s)	1644, 1826, 1830
CsiI	ACCWGGT	1 cut(s)	295
Csp6I	GTAC	6 cut(s)	4, 85, 578, 1045, 1416, 1555
CspAI	ACCGGT	1 cut(s)	703
CviQI	GTAC	6 cut(s)	4, 85, 578, 1045, 1416, 1555
DpnI	GATC	8 cut(s)	991, 1076, 1163, 1522, 1734, 1809, 1829, 1878
DpnII	GATC	8 cut(s)	989, 1074, 1161, 1520, 1732, 1807, 1827, 1876
DriI	GACNNNNNGTC	1 cut(s)	1327
Eam1104I	CTCTTC	2 cut(s)	1065, 1098
Eam1105I	GACNNNNNGTC	1 cut(s)	1327
EarI	CTCTTC	2 cut(s)	1065, 1098
Ecl136II	GAGCTC	1 cut(s)	1621
Eco130I	CCWWGG	2 cut(s)	444, 1788
Eco24I	GRGCYC	1 cut(s)	1623
Eco31I	GGTCTC	1 cut(s)	1362
Eco32I	GATATC	2 cut(s)	18, 1837
Eco47I	GGWCC	1 cut(s)	1865
Eco53kI	GAGCTC	1 cut(s)	1621
Eco57I	CTGAAG	1 cut(s)	1173
Eco88I	CYCGRG	1 cut(s)	1709
EcoICRI	GAGCTC	1 cut(s)	1621
EcoO109I	RGGNCCY	1 cut(s)	882
EcoRI	GAATTC	1 cut(s)	157
EcoRII	CCWGG	3 cut(s)	295, 745, 1274
EcoRV	GATATC	2 cut(s)	18, 1837
EcoT14I	CCWWGG	2 cut(s)	444, 1788
EcoT38I	GRGCYC	1 cut(s)	1623
ErhI	CCWWGG	2 cut(s)	444, 1788
FalI	AAGNNNNNCTT	2 cut(s)	490, 522
FaqI	GGGAC	1 cut(s)	1334
FbaI	TGATCA	1 cut(s)	1161
FblI	GTMKAC	2 cut(s)	180, 1007
Fnu4HI	GCNGC	3 cut(s)	166, 1312, 1715
FokI	GGATG	2 cut(s)	299, 1551
FriOI	GRGCYC	1 cut(s)	1623
Fsp4HI	GCNGC	3 cut(s)	166, 1312, 1715
FspBI	CTAG	6 cut(s)	132, 525, 927, 1124, 1188, 1286
GluI	GCNGC	3 cut(s)	166, 1312, 1715
GsaI	CCCAGC	1 cut(s)	1305
GsuI	CTGGAG	3 cut(s)	597, 723, 1637
HaeIII	GGCC	3 cut(s)	884, 1484, 1822
HapII	CCGG	4 cut(s)	126, 704, 1022, 1550
HincII	GTYRAC	1 cut(s)	1008
HindII	GTYRAC	1 cut(s)	1008
HinfI	GANTC	3 cut(s)	239, 258, 1664
HpaII	CCGG	4 cut(s)	126, 704, 1022, 1550
HphI	GGTGA	2 cut(s)	1150, 1427
Hpy166II	GTNNAC	2 cut(s)	181, 1008
Hpy8I	GTNNAC	2 cut(s)	181, 1008
Hpy99I	CGWCG	1 cut(s)	1365
HpyAV	CCTTC	7 cut(s)	117, 288, 410, 563, 1434, 1568, 1691
HpyCH4III	ACNGT	5 cut(s)	84, 661, 955, 1451, 1740
HpyCH4IV	ACGT	2 cut(s)	471, 1884
HpyF10VI	GCNNNNNNNGC	5 cut(s)	490, 857, 1311, 1490, 1784
HpySE526I	ACGT	2 cut(s)	471, 1884
Kpn2I	TCCGGA	1 cut(s)	1021
Ksp22I	TGATCA	1 cut(s)	1161
Kzo9I	GATC	8 cut(s)	989, 1074, 1161, 1520, 1732, 1807, 1827, 1876
LmnI	GCTCC	3 cut(s)	748, 1618, 1722
Lsp1109I	GCAGC	3 cut(s)	177, 1298, 1726
LweI	GCATC	2 cut(s)	235, 615
MabI	ACCWGGT	1 cut(s)	295
MaeI	CTAG	6 cut(s)	132, 525, 927, 1124, 1188, 1286
MaeII	ACGT	2 cut(s)	471, 1884
MaeIII	GTNAC	4 cut(s)	550, 1265, 1465, 1880
MalI	GATC	8 cut(s)	991, 1076, 1163, 1522, 1734, 1809, 1829, 1878
MboI	GATC	8 cut(s)	989, 1074, 1161, 1520, 1732, 1807, 1827, 1876
MboII	GAAGA	9 cut(s)	37, 629, 746, 1082, 1115, 1515, 1700, 1757, 1814
MfeI	CAATTG	1 cut(s)	322
MflI	RGATCY	1 cut(s)	1520
MhlI	GDGCHC	3 cut(s)	291, 1123, 1623
MluCI	AATT	9 cut(s)	9, 64, 157, 322, 637, 762, 945, 1474, 1673
MlyI	GAGTC	2 cut(s)	233, 252
MmeI	TCCRAC	1 cut(s)	680
MroI	TCCGGA	1 cut(s)	1021
MroXI	GAANNNNTTC	1 cut(s)	1507
MseI	TTAA	5 cut(s)	887, 921, 1040, 1659, 1842
MslI	CAYNNNNRTG	1 cut(s)	173
MspI	CCGG	4 cut(s)	126, 704, 1022, 1550
MspR9I	CCNGG	4 cut(s)	126, 297, 747, 1276
MunI	CAATTG	1 cut(s)	322
MvaI	CCWGG	3 cut(s)	297, 747, 1276
MwoI	GCNNNNNNNGC	5 cut(s)	490, 857, 1311, 1490, 1784
NciI	CCSGG	1 cut(s)	126
NdeII	GATC	8 cut(s)	989, 1074, 1161, 1520, 1732, 1807, 1827, 1876
NlaIV	GGNNCC	1 cut(s)	25
NmuCI	GTSAC	3 cut(s)	550, 1265, 1880
NspI	RCATGY	3 cut(s)	864, 1014, 1797
OliI	CACNNNNGTG	1 cut(s)	173
PaeR7I	CTCGAG	1 cut(s)	1709
PciI	ACATGT	1 cut(s)	1010
PdmI	GAANNNNTTC	1 cut(s)	1507
PfeI	GAWTC	1 cut(s)	1664
PflMI	CCANNNNNTGG	1 cut(s)	746
PinAI	ACCGGT	1 cut(s)	703
PkrI	GCNGC	3 cut(s)	167, 1313, 1716
Ple19I	CGATCG	1 cut(s)	1830
PleI	GAGTC	2 cut(s)	233, 252
PpsI	GAGTC	2 cut(s)	233, 252
PscI	ACATGT	1 cut(s)	1010
PshAI	GACNNNNGTC	1 cut(s)	1178
Psp124BI	GAGCTC	1 cut(s)	1623
Psp1406I	AACGTT	1 cut(s)	471
Psp6I	CCWGG	3 cut(s)	295, 745, 1274
PspFI	CCCAGC	1 cut(s)	1301
PspGI	CCWGG	3 cut(s)	295, 745, 1274
PspN4I	GGNNCC	1 cut(s)	25
PspPI	GGNCC	3 cut(s)	882, 1482, 1865
PspXI	VCTCGAGB	1 cut(s)	1709
PsrI	GAACNNNNNNTAC	2 cut(s)	1037, 1069
PstNI	CAGNNNCTG	3 cut(s)	746, 821, 1577
PsuI	RGATCY	1 cut(s)	1520
PvuI	CGATCG	1 cut(s)	1830
RsaI	GTAC	6 cut(s)	5, 86, 579, 1046, 1417, 1556
RsaNI	GTAC	6 cut(s)	4, 85, 578, 1045, 1416, 1555
RseI	CAYNNNNRTG	1 cut(s)	173
SacI	GAGCTC	1 cut(s)	1623
SalI	GTCGAC	1 cut(s)	1006
SaqAI	TTAA	5 cut(s)	887, 921, 1040, 1659, 1842
SatI	GCNGC	3 cut(s)	166, 1312, 1715
Sau3AI	GATC	8 cut(s)	989, 1074, 1161, 1520, 1732, 1807, 1827, 1876
Sau96I	GGNCC	3 cut(s)	882, 1482, 1865
ScaI	AGTACT	2 cut(s)	86, 1046
SchI	GAGTC	2 cut(s)	233, 252
ScrFI	CCNGG	4 cut(s)	126, 297, 747, 1276
SduI	GDGCHC	3 cut(s)	291, 1123, 1623
SexAI	ACCWGGT	1 cut(s)	295
SfaNI	GCATC	2 cut(s)	235, 615
SfcI	CTRYAG	2 cut(s)	1060, 1129
Sfr274I	CTCGAG	1 cut(s)	1709
SinI	GGWCC	1 cut(s)	1865
SlaI	CTCGAG	1 cut(s)	1709
SmiMI	CAYNNNNRTG	1 cut(s)	173
SmlI	CTYRAG	5 cut(s)	425, 691, 1315, 1349, 1709
SmoI	CTYRAG	5 cut(s)	425, 691, 1315, 1349, 1709
Sse9I	AATT	9 cut(s)	9, 64, 157, 322, 637, 762, 945, 1474, 1673
SsiI	CCGC	1 cut(s)	405
SspI	AATATT	3 cut(s)	344, 721, 1459
SspMI	CTAG	6 cut(s)	132, 525, 927, 1124, 1188, 1286
SstI	GAGCTC	1 cut(s)	1623
StyD4I	CCNGG	4 cut(s)	124, 295, 745, 1274
StyI	CCWWGG	2 cut(s)	444, 1788
TaaI	ACNGT	5 cut(s)	84, 661, 955, 1451, 1740
TaiI	ACGT	2 cut(s)	474, 1887
TaqI	TCGA	8 cut(s)	567, 1007, 1182, 1360, 1644, 1710, 1826, 1830
TasI	AATT	9 cut(s)	9, 64, 157, 322, 637, 762, 945, 1474, 1673
TatI	WGTACW	3 cut(s)	84, 1044, 1415
TfiI	GAWTC	1 cut(s)	1664
Tru1I	TTAA	5 cut(s)	887, 921, 1040, 1659, 1842
Tru9I	TTAA	5 cut(s)	887, 921, 1040, 1659, 1842
TscAI	CASTG	1 cut(s)	1415
TseFI	GTSAC	3 cut(s)	550, 1265, 1880
TseI	GCWGC	3 cut(s)	165, 1311, 1714
Tsp45I	GTSAC	3 cut(s)	550, 1265, 1880
TspDTI	ATGAA	5 cut(s)	37, 150, 553, 1116, 1717
TspRI	CASTG	1 cut(s)	1415
Van91I	CCANNNNNTGG	1 cut(s)	746
VpaK11BI	GGWCC	1 cut(s)	1865
XapI	RAATTY	4 cut(s)	9, 64, 157, 1673
XbaI	TCTAGA	1 cut(s)	131
XceI	RCATGY	3 cut(s)	864, 1014, 1797
XcmI	CCANNNNNNNNNTGG	2 cut(s)	621, 1795
XhoI	CTCGAG	1 cut(s)	1709
XmiI	GTMKAC	2 cut(s)	180, 1007
XmnI	GAANNNNTTC	1 cut(s)	1507
XspI	CTAG	6 cut(s)	132, 525, 927, 1124, 1188, 1286
ZrmI	AGTACT	2 cut(s)	86, 1046

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.