Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0011547

Physical Location & Seq

Genomic Coordinates Reverse (-)

65382143 .. 65384974

Gene Structure 2832 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG381100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2049 bp

ATGGATATTAAAATGATAGTGGTACGTAGTCTTTTATTGCTAGCTTCCCATCTGGCCAAACAACTCTATACATCAGCTACCAACTTGACTATTGCGTCTCATCCCATTTATTTTCTTCTCTTCTTATATACCAAACCGATTTTTGTACCAAATTTTATGTACCAAATTTTGATATCAGGAACCATGATTTTTCTCTGGTTCTTCATCTTGGTTTGCCTAAATTCAAGCCATGCTCAACAGTACTATGACCAATCCGAGTGTCCTTCCAATATTAGCTACCCCGGTTCTAGATACACTTGCAATATGTTCCAGAATTCATGCAGCACCTATGCGGTATACAGAGCCAACCAACATTTCCAGACTATTGCAAATATCTCAGACTTGTTTCACATGGACTCTGATGCAATGCTTAGACTCAACAATCTTACATCTCCTTCTGATGCGCTCAAACCAGGTAGAGAAGTTCTCATCCCCATCAATTGTTCTTGCTCAGGTCAATATTTTCAGGCAAGTTTCAGCTACATGGTGTCCGAAAAGACATCATACTCCGAGATAGCTTGCGGAGTTTTTGAAGGCTTACTCAAGTCCTCTACACTTACCGAGGAAAACTCGGTTCAAGTCATCAACGTTGGTGCTGAGCTTCGTGTGCCTCTAAGATGTGCTTGTCCTGATAACTTAGCTAGTAAGAAAGGAGTGAAGTATCTTGTGACATACCCTTTCATCGAAGGAGATGTACCAATCCTGTTGAGTAAGAGGTTCGGCATCTCTCCAGAAGATTTATGGTTAGTCAATAATTTAGAGCCACCAAATCCAACTGTATTTCCAAACACAACTATTTTAGTTCCCTTGAGAGAACCACCGGTTCTGAACTTCAATATTCCAGATTCTCCACCTCCAGCTCCTGGTTTTCTTCCCACAATTTCTGTCGTAAAGCCGAATAACAGCACAAGACTAAGGAGTTTGTATATAGCAGGGTCTGTTGTTGGGTTTTCACTACTGCTTTTAGCATTGATTGCATGTGCAGTTTTGTATAGGAGGGCCTTAAAGAAGTGGAAGCCTGAGAAGTGGCACTCCTTTAATGCTAGAAGCTCTCCACTTTCAATTTCAACAGTCAGAAGTCCTCTCAAATCCAGTCTAACGGGTAGATCAAGCTCTCCAATGTCGACATGTTTATCTCCGGATATTCTTGCTGGATTAAAGTACTCTTTGTTCAACTACAGCATAGAAGAGATCAGGAAAGCAACAAGGGATTTCAATGAAGAGAACAAGACTGGTGCTCTAGTCTATAGAGGGGTGATAAACAATGCTGAAGTGATGATCAAGCAGATGACATTTGTCGAAACTAGCCATGTTATAGATGTCCATTCCAAAATCAACCACATCAATATCTTGAACTTGGAGGGTGTTTCTTATGGAGAAAGTGACTTGTCCTGGTCATATCTAGTGTTTGAGCTTCCCAGCAATGGCTGCTTGAGGGACTGCTTGTCTCATACATCTAATCCTCTTGAGTGGTCTCGACGAACACAAATAGCTTTTGATATTGCCACAGGACTTCACTATTTGCACTGCTGTACTTTCCCTTCCTATGCTCACCTAAACATAAACAGTAGAAATATTTTTGTAACAGAAAATTGGAGGGCCAAACTTGCAAATATCGGAACTCTTTCTGCATTGGGATCTTCCGAAAACAAAGGATGGGTTGCACCGGAGTACCCTCTATACAGCTCAGCTTCTGAAAAAGTGGATATTTTTGCTTTTGGGGTCGTTTTGCTGGAGCTCATCTCAGCCAGAGAGGACATCGATGGGAAGTTATTTAAGGAATCCATCAAATTTTTAGGAGGGGGAGATAGTGAAGGAGGTTTCCTCGAGCAGCTAAGGAGCTTCATGGATCAACAGTTAGAAGATTACCCTCTTGCAGAGGCTCTGTGTTTGGCTGTTTTAGCCAAGGCATGTGTTGAAGATGATCCTCTCCACAGGCCATCGATCGATGATATCATTAAAGTCCTTGCCAGAATGGTAGGACCAGAAGTTGATCGTCACGTTTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase_Tyr

Protein Analysis

682

Amino Acids

76.19

Weight (kDa)

6.33

Isoelectric Point (pI)

55.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LysM1_NFP_LYK	PF23446	106 - 163	1.4e-20	NFP/LYK LysM1 domain
LysM2_CERK1_LYK3_4_5	PF23472	167 - 219	3.9e-16	LYK3/4/5 LysM2 domain
LysM3_LYK4_5	PF23473	234 - 283	1.4e-06	LYK4/5 LysM3 domain
PK_Tyr_Ser-Thr	PF07714	449 - 668	5e-22	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	452 - 666	1.5e-14	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011547)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g31710
malus_domestica	MD00G1205900.v1.1 MD03G1121700.v1.1 MD11G1140300.v1.1 MD11G1140400.v1.1
prunus_persica	Prupe.6G104800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0058401
rosa_laevigata	RLG00000035042 RLG00000035217
rosa_multiflora	Rmu_sc0000367.1_g000110
rosa_roxburghii	Rroxscaffold_1G00022160 Rroxscaffold_1G00024260
rosa_rugosa	Rorug05G0313600.1
rosa_samantha	Rh5AG381100 Rh5BG378700 Rh5BG392700 Rh5CG416800 Rh5DG407900
rosa_wichuraiana	Rw5G034550 Rw5G035910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	94
AccB7I	CCANNNNNTGG	1 cut(s)	902
AccI	GTMKAC	2 cut(s)	336, 1163
AccIII	TCCGGA	1 cut(s)	1177
AciI	CCGC	2 cut(s)	332, 561
AclI	AACGTT	1 cut(s)	627
AclWI	GGATC	3 cut(s)	1684, 1896, 1958
AcoI	YGGCCR	1 cut(s)	54
AcsI	RAATTY	5 cut(s)	151, 165, 220, 313, 1829
AcuI	CTGAAG	1 cut(s)	1329
AfaI	GTAC	8 cut(s)	24, 147, 161, 242, 735, 1202, 1573, 1712
AfiI	CCNNNNNNNGG	2 cut(s)	902, 1463
AflIII	ACRYGT	1 cut(s)	1166
AgeI	ACCGGT	1 cut(s)	859
AhdI	GACNNNNNGTC	1 cut(s)	1483
AjnI	CCWGG	3 cut(s)	451, 901, 1430
AjuI	GAANNNNNNNTTGG	2 cut(s)	338, 370
Alw21I	GWGCWC	2 cut(s)	1279, 1779
Alw26I	GTCTC	3 cut(s)	102, 1491, 1518
AlwI	GGATC	3 cut(s)	1684, 1896, 1958
AlwNI	CAGNNNCTG	3 cut(s)	902, 977, 1733
Ama87I	CYCGRG	1 cut(s)	1865
Aor13HI	TCCGGA	1 cut(s)	1177
AoxI	GGCC	4 cut(s)	54, 1038, 1638, 1976
ApeKI	GCWGC	3 cut(s)	321, 1467, 1870
ApoI	RAATTY	5 cut(s)	151, 165, 220, 313, 1829
AsiGI	ACCGGT	1 cut(s)	859
Asp700I	GAANNNNTTC	1 cut(s)	1663
AspLEI	GCGC	1 cut(s)	445
AspS9I	GGNCC	3 cut(s)	1038, 1638, 2021
AsuC2I	CCSGG	1 cut(s)	282
AsuHPI	GGTGA	2 cut(s)	1306, 1583
AsuNHI	GCTAGC	1 cut(s)	40
AvaI	CYCGRG	1 cut(s)	1865
AvaII	GGWCC	1 cut(s)	2021
BaeI	ACNNNNGTAYC	2 cut(s)	1694, 1727
BalI	TGGCCA	1 cut(s)	56
BanII	GRGCYC	1 cut(s)	1779
BarI	GAAGNNNNNNTAC	4 cut(s)	717, 749, 1564, 1596
Bbv12I	GWGCWC	2 cut(s)	1279, 1779
BbvI	GCAGC	3 cut(s)	333, 1454, 1882
BccI	CCATC	6 cut(s)	57, 482, 1689, 1796, 1832, 1987
BciT130I	CCWGG	3 cut(s)	453, 903, 1432
BclI	TGATCA	1 cut(s)	1317
BcnI	CCSGG	1 cut(s)	282
BcoDI	GTCTC	3 cut(s)	102, 1491, 1518
BfaI	CTAG	7 cut(s)	41, 288, 681, 1083, 1280, 1344, 1442
BfmI	CTRYAG	2 cut(s)	1216, 1285
BisI	GCNGC	3 cut(s)	322, 1468, 1871
BlpI	GCTNAGC	2 cut(s)	636, 1726
BlsI	GCNGC	3 cut(s)	323, 1469, 1872
BmcAI	AGTACT	2 cut(s)	242, 1202
Bme1390I	CCNGG	4 cut(s)	282, 453, 903, 1432
Bme18I	GGWCC	1 cut(s)	2021
BmeRI	GACNNNNNGTC	1 cut(s)	1483
BmeT110I	CYCGRG	1 cut(s)	1865
BmgT120I	GGNCC	3 cut(s)	1038, 1638, 2021
BmiI	GGNNCC	1 cut(s)	181
BmrFI	CCNGG	4 cut(s)	282, 453, 903, 1432
BmsI	GCATC	3 cut(s)	391, 430, 771
BmtI	GCTAGC	1 cut(s)	44
BoxI	GACNNNNGTC	1 cut(s)	1334
BplI	GAGNNNNNCTC	8 cut(s)	450, 482, 593, 625, 1766, 1798, 1848, 1880
BpmI	CTGGAG	3 cut(s)	753, 879, 1793
Bpu10I	CCTNAGC	2 cut(s)	490, 1874
Bpu1102I	GCTNAGC	2 cut(s)	636, 1726
BpuEI	CTTGAG	4 cut(s)	566, 868, 1492, 1526
BpuMI	CCSGG	1 cut(s)	282
Bsa29I	ATCGAT	3 cut(s)	1800, 1982, 1986
BsaAI	YACGTR	1 cut(s)	26
BsaI	GGTCTC	1 cut(s)	1518
BsaJI	CCNNGG	3 cut(s)	280, 600, 1944
BsaWI	WCCGGW	3 cut(s)	859, 1177, 1705
Bsc4I	CCNNNNNNNGG	2 cut(s)	902, 1463
Bse118I	RCCGGY	1 cut(s)	859
Bse1I	ACTGG	2 cut(s)	1131, 1276
Bse3DI	GCAATG	2 cut(s)	411, 1468
BseAI	TCCGGA	1 cut(s)	1177
BseBI	CCWGG	3 cut(s)	453, 903, 1432
BseCI	ATCGAT	3 cut(s)	1800, 1982, 1986
BseDI	CCNNGG	3 cut(s)	280, 600, 1944
BseGI	GGATG	3 cut(s)	100, 468, 1700
BseLI	CCNNNNNNNGG	2 cut(s)	902, 1463
BseMI	GCAATG	2 cut(s)	411, 1468
BseMII	CTCAG	6 cut(s)	390, 504, 627, 1050, 1740, 1797
BseNI	ACTGG	2 cut(s)	1131, 1276
BseXI	GCAGC	3 cut(s)	333, 1454, 1882
BseYI	CCCAGC	1 cut(s)	1457
BsgI	GTGCAG	1 cut(s)	1041
Bsh1285I	CGRYCG	1 cut(s)	1986
BshFI	GGCC	4 cut(s)	56, 1040, 1640, 1978
BshTI	ACCGGT	1 cut(s)	859
BshVI	ATCGAT	3 cut(s)	1800, 1982, 1986
BsiEI	CGRYCG	1 cut(s)	1986
BsiHKAI	GWGCWC	2 cut(s)	1279, 1779
BsiHKCI	CYCGRG	1 cut(s)	1865
BsiSI	CCGG	4 cut(s)	282, 860, 1178, 1706
BslFI	GGGAC	1 cut(s)	1490
BslI	CCNNNNNNNGG	2 cut(s)	902, 1463
BsmAI	GTCTC	3 cut(s)	102, 1491, 1518
BsmBI	CGTCTC	1 cut(s)	102
BsmFI	GGGAC	1 cut(s)	1490
BsnI	GGCC	4 cut(s)	56, 1040, 1640, 1978
Bso31I	GGTCTC	1 cut(s)	1518
BsoBI	CYCGRG	1 cut(s)	1865
Bsp1286I	GDGCHC	2 cut(s)	1279, 1779
Bsp13I	TCCGGA	1 cut(s)	1177
Bsp143I	GATC	8 cut(s)	1145, 1230, 1317, 1676, 1888, 1963, 1983, 2032
Bsp1720I	GCTNAGC	2 cut(s)	636, 1726
BspACI	CCGC	2 cut(s)	332, 561
BspANI	GGCC	4 cut(s)	56, 1040, 1640, 1978
BspCNI	CTCAG	6 cut(s)	389, 503, 628, 1051, 1739, 1796
BspDI	ATCGAT	3 cut(s)	1800, 1982, 1986
BspEI	TCCGGA	1 cut(s)	1177
BspLI	GGNNCC	1 cut(s)	181
BspOI	GCTAGC	1 cut(s)	44
BspPI	GGATC	3 cut(s)	1684, 1896, 1958
BspTNI	GGTCTC	1 cut(s)	1518
BsrDI	GCAATG	2 cut(s)	411, 1468
BsrFI	RCCGGY	1 cut(s)	859
BsrI	ACTGG	2 cut(s)	1131, 1276
BssAI	RCCGGY	1 cut(s)	859
BssECI	CCNNGG	3 cut(s)	280, 600, 1944
BssMI	GATC	8 cut(s)	1145, 1230, 1317, 1676, 1888, 1963, 1983, 2032
BssNAI	GTATAC	1 cut(s)	337
BssT1I	CCWWGG	1 cut(s)	1944
Bst1107I	GTATAC	1 cut(s)	337
Bst2UI	CCWGG	3 cut(s)	453, 903, 1432
Bst4CI	ACNGT	5 cut(s)	240, 817, 1111, 1607, 1896
Bst6I	CTCTTC	3 cut(s)	125, 1221, 1254
BstAPI	GCANNNNNTGC	2 cut(s)	1013, 1467
BstBAI	YACGTR	1 cut(s)	26
BstC8I	GCNNGC	2 cut(s)	42, 559
BstF5I	GGATG	3 cut(s)	100, 468, 1700
BstHHI	GCGC	1 cut(s)	445
BstKTI	GATC	8 cut(s)	1148, 1233, 1320, 1679, 1891, 1966, 1986, 2035
BstMAI	GTCTC	3 cut(s)	102, 1491, 1518
BstMBI	GATC	8 cut(s)	1145, 1230, 1317, 1676, 1888, 1963, 1983, 2032
BstMCI	CGRYCG	1 cut(s)	1986
BstMWI	GCNNNNNNNGC	5 cut(s)	646, 1013, 1467, 1646, 1940
BstNI	CCWGG	3 cut(s)	453, 903, 1432
BstNSI	RCATGY	3 cut(s)	1020, 1170, 1953
BstPAI	GACNNNNGTC	1 cut(s)	1334
BstSCI	CCNGG	4 cut(s)	280, 451, 901, 1430
BstSFI	CTRYAG	2 cut(s)	1216, 1285
BstSNI	TACGTA	1 cut(s)	26
BstV1I	GCAGC	3 cut(s)	333, 1454, 1882
BstX2I	RGATCY	1 cut(s)	1676
BstYI	RGATCY	1 cut(s)	1676
BstZ17I	GTATAC	1 cut(s)	337
Bsu15I	ATCGAT	3 cut(s)	1800, 1982, 1986
BsuRI	GGCC	4 cut(s)	56, 1040, 1640, 1978
BsuTUI	ATCGAT	3 cut(s)	1800, 1982, 1986
BtsCI	GGATG	3 cut(s)	100, 468, 1700
BtsI	GCAGTG	1 cut(s)	1564
BtsIMutI	CAGTG	1 cut(s)	1564
Cac8I	GCNNGC	2 cut(s)	42, 559
CaiI	CAGNNNCTG	3 cut(s)	902, 977, 1733
CfoI	GCGC	1 cut(s)	445
Cfr10I	RCCGGY	1 cut(s)	859
Cfr13I	GGNCC	3 cut(s)	1038, 1638, 2021
ClaI	ATCGAT	3 cut(s)	1800, 1982, 1986
CseI	GACGC	1 cut(s)	84
CsiI	ACCWGGT	1 cut(s)	451
Csp6I	GTAC	8 cut(s)	23, 146, 160, 241, 734, 1201, 1572, 1711
CspAI	ACCGGT	1 cut(s)	859
CviQI	GTAC	8 cut(s)	23, 146, 160, 241, 734, 1201, 1572, 1711
DpnI	GATC	8 cut(s)	1147, 1232, 1319, 1678, 1890, 1965, 1985, 2034
DpnII	GATC	8 cut(s)	1145, 1230, 1317, 1676, 1888, 1963, 1983, 2032
DrdI	GACNNNNNNGTC	1 cut(s)	94
DriI	GACNNNNNGTC	1 cut(s)	1483
DseDI	GACNNNNNNGTC	1 cut(s)	94
EaeI	YGGCCR	1 cut(s)	54
Eam1104I	CTCTTC	3 cut(s)	125, 1221, 1254
Eam1105I	GACNNNNNGTC	1 cut(s)	1483
EarI	CTCTTC	3 cut(s)	125, 1221, 1254
Ecl136II	GAGCTC	1 cut(s)	1777
Eco105I	TACGTA	1 cut(s)	26
Eco130I	CCWWGG	1 cut(s)	1944
Eco24I	GRGCYC	1 cut(s)	1779
Eco31I	GGTCTC	1 cut(s)	1518
Eco32I	GATATC	2 cut(s)	174, 1993
Eco47I	GGWCC	1 cut(s)	2021
Eco53kI	GAGCTC	1 cut(s)	1777
Eco57I	CTGAAG	1 cut(s)	1329
Eco88I	CYCGRG	1 cut(s)	1865
EcoICRI	GAGCTC	1 cut(s)	1777
EcoO109I	RGGNCCY	1 cut(s)	1038
EcoRI	GAATTC	1 cut(s)	313
EcoRII	CCWGG	3 cut(s)	451, 901, 1430
EcoRV	GATATC	2 cut(s)	174, 1993
EcoT14I	CCWWGG	1 cut(s)	1944
EcoT38I	GRGCYC	1 cut(s)	1779
ErhI	CCWWGG	1 cut(s)	1944
Esp3I	CGTCTC	1 cut(s)	102
FalI	AAGNNNNNCTT	2 cut(s)	646, 678
FaqI	GGGAC	1 cut(s)	1490
FbaI	TGATCA	1 cut(s)	1317
FblI	GTMKAC	2 cut(s)	336, 1163
Fnu4HI	GCNGC	3 cut(s)	322, 1468, 1871
FokI	GGATG	3 cut(s)	87, 455, 1707
FriOI	GRGCYC	1 cut(s)	1779
Fsp4HI	GCNGC	3 cut(s)	322, 1468, 1871
FspBI	CTAG	7 cut(s)	41, 288, 681, 1083, 1280, 1344, 1442
GlaI	GCGC	1 cut(s)	444
GluI	GCNGC	3 cut(s)	322, 1468, 1871
GsaI	CCCAGC	1 cut(s)	1461
GsuI	CTGGAG	3 cut(s)	753, 879, 1793
HaeIII	GGCC	4 cut(s)	56, 1040, 1640, 1978
HapII	CCGG	4 cut(s)	282, 860, 1178, 1706
HgaI	GACGC	1 cut(s)	84
HhaI	GCGC	1 cut(s)	445
Hin6I	GCGC	1 cut(s)	443
HinP1I	GCGC	1 cut(s)	443
HincII	GTYRAC	1 cut(s)	1164
HindII	GTYRAC	1 cut(s)	1164
HinfI	GANTC	4 cut(s)	395, 414, 884, 1820
HpaII	CCGG	4 cut(s)	282, 860, 1178, 1706
HphI	GGTGA	2 cut(s)	1306, 1583
Hpy166II	GTNNAC	2 cut(s)	337, 1164
Hpy8I	GTNNAC	2 cut(s)	337, 1164
Hpy99I	CGWCG	1 cut(s)	1521
HpyAV	CCTTC	6 cut(s)	273, 444, 566, 719, 1590, 1847
HpyCH4III	ACNGT	5 cut(s)	240, 817, 1111, 1607, 1896
HpyCH4IV	ACGT	3 cut(s)	25, 627, 2040
HpyF10VI	GCNNNNNNNGC	5 cut(s)	646, 1013, 1467, 1646, 1940
HpySE526I	ACGT	3 cut(s)	25, 627, 2040
HspAI	GCGC	1 cut(s)	443
Kpn2I	TCCGGA	1 cut(s)	1177
Ksp22I	TGATCA	1 cut(s)	1317
Kzo9I	GATC	8 cut(s)	1145, 1230, 1317, 1676, 1888, 1963, 1983, 2032
LmnI	GCTCC	3 cut(s)	904, 1774, 1878
Lsp1109I	GCAGC	3 cut(s)	333, 1454, 1882
LweI	GCATC	3 cut(s)	391, 430, 771
MabI	ACCWGGT	1 cut(s)	451
MaeI	CTAG	7 cut(s)	41, 288, 681, 1083, 1280, 1344, 1442
MaeII	ACGT	3 cut(s)	25, 627, 2040
MaeIII	GTNAC	4 cut(s)	706, 1421, 1621, 2036
MalI	GATC	8 cut(s)	1147, 1232, 1319, 1678, 1890, 1965, 1985, 2034
MboI	GATC	8 cut(s)	1145, 1230, 1317, 1676, 1888, 1963, 1983, 2032
MfeI	CAATTG	1 cut(s)	478
MflI	RGATCY	1 cut(s)	1676
MhlI	GDGCHC	2 cut(s)	1279, 1779
MlsI	TGGCCA	1 cut(s)	56
MluNI	TGGCCA	1 cut(s)	56
MlyI	GAGTC	2 cut(s)	389, 408
MmeI	TCCRAC	1 cut(s)	836
Mox20I	TGGCCA	1 cut(s)	56
MroI	TCCGGA	1 cut(s)	1177
MroXI	GAANNNNTTC	1 cut(s)	1663
MscI	TGGCCA	1 cut(s)	56
MseI	TTAA	6 cut(s)	9, 1043, 1077, 1196, 1815, 1998
Msp20I	TGGCCA	1 cut(s)	56
MspI	CCGG	4 cut(s)	282, 860, 1178, 1706
MspR9I	CCNGG	4 cut(s)	282, 453, 903, 1432
MunI	CAATTG	1 cut(s)	478
MvaI	CCWGG	3 cut(s)	453, 903, 1432
MwoI	GCNNNNNNNGC	5 cut(s)	646, 1013, 1467, 1646, 1940
NciI	CCSGG	1 cut(s)	282
NdeII	GATC	8 cut(s)	1145, 1230, 1317, 1676, 1888, 1963, 1983, 2032
NheI	GCTAGC	1 cut(s)	40
NlaIV	GGNNCC	1 cut(s)	181
NmuCI	GTSAC	3 cut(s)	706, 1421, 2036
NspI	RCATGY	3 cut(s)	1020, 1170, 1953
PaeR7I	CTCGAG	1 cut(s)	1865
PciI	ACATGT	1 cut(s)	1166
PdmI	GAANNNNTTC	1 cut(s)	1663
PfeI	GAWTC	2 cut(s)	884, 1820
PflMI	CCANNNNNTGG	1 cut(s)	902
PinAI	ACCGGT	1 cut(s)	859
PkrI	GCNGC	3 cut(s)	323, 1469, 1872
Ple19I	CGATCG	1 cut(s)	1986
PleI	GAGTC	2 cut(s)	389, 408
PpsI	GAGTC	2 cut(s)	389, 408
Ppu21I	YACGTR	1 cut(s)	26
PscI	ACATGT	1 cut(s)	1166
PshAI	GACNNNNGTC	1 cut(s)	1334
Psp124BI	GAGCTC	1 cut(s)	1779
Psp1406I	AACGTT	1 cut(s)	627
Psp6I	CCWGG	3 cut(s)	451, 901, 1430
PspFI	CCCAGC	1 cut(s)	1457
PspGI	CCWGG	3 cut(s)	451, 901, 1430
PspN4I	GGNNCC	1 cut(s)	181
PspPI	GGNCC	3 cut(s)	1038, 1638, 2021
PspXI	VCTCGAGB	1 cut(s)	1865
PsrI	GAACNNNNNNTAC	2 cut(s)	1193, 1225
PstNI	CAGNNNCTG	3 cut(s)	902, 977, 1733
PsuI	RGATCY	1 cut(s)	1676
PvuI	CGATCG	1 cut(s)	1986
RsaI	GTAC	8 cut(s)	24, 147, 161, 242, 735, 1202, 1573, 1712
RsaNI	GTAC	8 cut(s)	23, 146, 160, 241, 734, 1201, 1572, 1711
SacI	GAGCTC	1 cut(s)	1779
SalI	GTCGAC	1 cut(s)	1162
SaqAI	TTAA	6 cut(s)	9, 1043, 1077, 1196, 1815, 1998
SatI	GCNGC	3 cut(s)	322, 1468, 1871
Sau3AI	GATC	8 cut(s)	1145, 1230, 1317, 1676, 1888, 1963, 1983, 2032
Sau96I	GGNCC	3 cut(s)	1038, 1638, 2021
ScaI	AGTACT	2 cut(s)	242, 1202
SchI	GAGTC	2 cut(s)	389, 408
ScrFI	CCNGG	4 cut(s)	282, 453, 903, 1432
SduI	GDGCHC	2 cut(s)	1279, 1779
SexAI	ACCWGGT	1 cut(s)	451
SfaNI	GCATC	3 cut(s)	391, 430, 771
SfcI	CTRYAG	2 cut(s)	1216, 1285
Sfr274I	CTCGAG	1 cut(s)	1865
SinI	GGWCC	1 cut(s)	2021
SlaI	CTCGAG	1 cut(s)	1865
SmlI	CTYRAG	5 cut(s)	581, 847, 1471, 1505, 1865
SmoI	CTYRAG	5 cut(s)	581, 847, 1471, 1505, 1865
SnaBI	TACGTA	1 cut(s)	26
SsiI	CCGC	2 cut(s)	332, 561
SspI	AATATT	4 cut(s)	271, 500, 877, 1615
SspMI	CTAG	7 cut(s)	41, 288, 681, 1083, 1280, 1344, 1442
SstI	GAGCTC	1 cut(s)	1779
StyD4I	CCNGG	4 cut(s)	280, 451, 901, 1430
StyI	CCWWGG	1 cut(s)	1944
TaaI	ACNGT	5 cut(s)	240, 817, 1111, 1607, 1896
TaiI	ACGT	3 cut(s)	28, 630, 2043
TaqI	TCGA	8 cut(s)	723, 1163, 1338, 1516, 1800, 1866, 1982, 1986
TatI	WGTACW	3 cut(s)	240, 1200, 1571
TfiI	GAWTC	2 cut(s)	884, 1820
Tru1I	TTAA	6 cut(s)	9, 1043, 1077, 1196, 1815, 1998
Tru9I	TTAA	6 cut(s)	9, 1043, 1077, 1196, 1815, 1998
TscAI	CASTG	1 cut(s)	1571
TseFI	GTSAC	3 cut(s)	706, 1421, 2036
TseI	GCWGC	3 cut(s)	321, 1467, 1870
Tsp45I	GTSAC	3 cut(s)	706, 1421, 2036
TspDTI	ATGAA	5 cut(s)	193, 306, 709, 1272, 1873
TspRI	CASTG	1 cut(s)	1571
Van91I	CCANNNNNTGG	1 cut(s)	902
VpaK11BI	GGWCC	1 cut(s)	2021
XapI	RAATTY	5 cut(s)	151, 165, 220, 313, 1829
XbaI	TCTAGA	1 cut(s)	287
XceI	RCATGY	3 cut(s)	1020, 1170, 1953
XcmI	CCANNNNNNNNNTGG	1 cut(s)	777
XhoI	CTCGAG	1 cut(s)	1865
XmiI	GTMKAC	2 cut(s)	336, 1163
XmnI	GAANNNNTTC	1 cut(s)	1663
XspI	CTAG	7 cut(s)	41, 288, 681, 1083, 1280, 1344, 1442
ZrmI	AGTACT	2 cut(s)	242, 1202

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.