TBC1 domain family member
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G27100 AT4G27100 AT5G54780 |
| fragaria_vesca | FvH4_3g21970 FvH4_3g21970 FvH4_3g21970 FvH4_3g21970 FvH4_3g21970 FvH4_3g21970 |
| malus_domestica | MD03G1209800.v1.1 MD11G1224500.v1.1 |
| prunus_persica | Prupe.4G205400_v2.0.a1 Prupe.4G205400_v2.0.a1 |
| pyrus_communis | pycom03g15870 pycom11g19820 |
| rosa_chinensis | RchiOBHm_Chr5g0037821 |
| rosa_laevigata | RLG00000033813 |
| rosa_multiflora | Rmu_sc0005416.1_g000010 |
| rosa_roxburghii | Rroxscaffold_1G00043100 |
| rosa_rugosa | Rorug05G0167900 |
| rosa_samantha | Rh5AG256700 Rh5BG259100 Rh5CG292100 Rh5DG269000 |
| rosa_wichuraiana | Rw5G023800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 725 |
| Acc36I | ACCTGC | 1 cut(s) | 83 |
| AccB1I | GGYRCC | 1 cut(s) | 1282 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 434 |
| AccIII | TCCGGA | 1 cut(s) | 873 |
| AciI | CCGC | 2 cut(s) | 76, 849 |
| AclWI | GGATC | 5 cut(s) | 236, 395, 408, 809, 1024 |
| AcsI | RAATTY | 5 cut(s) | 174, 739, 902, 1090, 1219 |
| AcuI | CTGAAG | 1 cut(s) | 399 |
| AfaI | GTAC | 7 cut(s) | 45, 58, 411, 445, 538, 751, 980 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 341, 434, 967 |
| AflIII | ACRYGT | 1 cut(s) | 1040 |
| AgsI | TTSAA | 6 cut(s) | 82, 441, 713, 798, 1204, 1255 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 168 |
| AhlI | ACTAGT | 1 cut(s) | 550 |
| AjiI | CACGTC | 2 cut(s) | 529, 1043 |
| AjnI | CCWGG | 1 cut(s) | 611 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 62, 94 |
| AleI | CACNNNNGTG | 1 cut(s) | 1045 |
| AluBI | AGCT | 5 cut(s) | 759, 1152, 1159, 1172, 1238 |
| AluI | AGCT | 5 cut(s) | 759, 1152, 1159, 1172, 1238 |
| Alw21I | GWGCWC | 2 cut(s) | 254, 1154 |
| Alw26I | GTCTC | 1 cut(s) | 833 |
| AlwI | GGATC | 5 cut(s) | 236, 395, 408, 809, 1024 |
| Ama87I | CYCGRG | 1 cut(s) | 1173 |
| Aor13HI | TCCGGA | 1 cut(s) | 873 |
| AoxI | GGCC | 2 cut(s) | 142, 1008 |
| ApeKI | GCWGC | 1 cut(s) | 125 |
| ApoI | RAATTY | 5 cut(s) | 174, 739, 902, 1090, 1219 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 848, 880 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1090 |
| AspLEI | GCGC | 1 cut(s) | 726 |
| AsuHPI | GGTGA | 2 cut(s) | 170, 866 |
| AvaI | CYCGRG | 1 cut(s) | 1173 |
| BaeGI | GKGCMC | 1 cut(s) | 1287 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 612, 645 |
| BamHI | GGATCC | 1 cut(s) | 400 |
| BanI | GGYRCC | 1 cut(s) | 1282 |
| BanII | GRGCYC | 2 cut(s) | 949, 1154 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 778, 810 |
| Bbv12I | GWGCWC | 2 cut(s) | 254, 1154 |
| BbvI | GCAGC | 1 cut(s) | 112 |
| BccI | CCATC | 3 cut(s) | 201, 205, 377 |
| BceAI | ACGGC | 2 cut(s) | 306, 587 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 284, 318 |
| BciT130I | CCWGG | 1 cut(s) | 613 |
| BcoDI | GTCTC | 1 cut(s) | 833 |
| BcuI | ACTAGT | 1 cut(s) | 550 |
| BfaI | CTAG | 2 cut(s) | 551, 845 |
| BfuAI | ACCTGC | 1 cut(s) | 83 |
| BisI | GCNGC | 1 cut(s) | 126 |
| BlsI | GCNGC | 1 cut(s) | 127 |
| BmcAI | AGTACT | 1 cut(s) | 411 |
| Bme1390I | CCNGG | 1 cut(s) | 613 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 168 |
| BmeT110I | CYCGRG | 1 cut(s) | 1173 |
| BmgBI | CACGTC | 2 cut(s) | 529, 1043 |
| BmiI | GGNNCC | 3 cut(s) | 402, 468, 1284 |
| BmrFI | CCNGG | 1 cut(s) | 613 |
| BmrI | ACTGGG | 1 cut(s) | 1254 |
| BmsI | GCATC | 5 cut(s) | 489, 685, 711, 867, 1216 |
| BmuI | ACTGGG | 1 cut(s) | 1254 |
| BpuEI | CTTGAG | 2 cut(s) | 789, 971 |
| BsaJI | CCNNGG | 2 cut(s) | 181, 1011 |
| BsaWI | WCCGGW | 1 cut(s) | 873 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 926, 956 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 341, 434, 967 |
| Bse1I | ACTGG | 6 cut(s) | 153, 470, 493, 1131, 1219, 1249 |
| BseAI | TCCGGA | 1 cut(s) | 873 |
| BseBI | CCWGG | 1 cut(s) | 613 |
| BseDI | CCNNGG | 2 cut(s) | 181, 1011 |
| BseGI | GGATG | 4 cut(s) | 193, 504, 882, 1189 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 341, 434, 967 |
| BseMII | CTCAG | 1 cut(s) | 42 |
| BseNI | ACTGG | 6 cut(s) | 153, 470, 493, 1131, 1219, 1249 |
| BseRI | GAGGAG | 1 cut(s) | 222 |
| BseSI | GKGCMC | 1 cut(s) | 1287 |
| BseXI | GCAGC | 1 cut(s) | 112 |
| BseYI | CCCAGC | 1 cut(s) | 14 |
| Bsh1285I | CGRYCG | 1 cut(s) | 308 |
| BshFI | GGCC | 2 cut(s) | 144, 1010 |
| BshNI | GGYRCC | 1 cut(s) | 1282 |
| BsiEI | CGRYCG | 1 cut(s) | 308 |
| BsiHKAI | GWGCWC | 2 cut(s) | 254, 1154 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1173 |
| BsiSI | CCGG | 1 cut(s) | 874 |
| BslFI | GGGAC | 2 cut(s) | 23, 31 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 341, 434, 967 |
| BsmAI | GTCTC | 1 cut(s) | 833 |
| BsmFI | GGGAC | 2 cut(s) | 23, 31 |
| BsnI | GGCC | 2 cut(s) | 144, 1010 |
| BsoBI | CYCGRG | 1 cut(s) | 1173 |
| Bsp1286I | GDGCHC | 4 cut(s) | 254, 949, 1154, 1287 |
| Bsp13I | TCCGGA | 1 cut(s) | 873 |
| Bsp143I | GATC | 6 cut(s) | 84, 241, 400, 652, 814, 1016 |
| BspACI | CCGC | 2 cut(s) | 76, 849 |
| BspANI | GGCC | 2 cut(s) | 144, 1010 |
| BspCNI | CTCAG | 1 cut(s) | 43 |
| BspEI | TCCGGA | 1 cut(s) | 873 |
| BspLI | GGNNCC | 3 cut(s) | 402, 468, 1284 |
| BspMI | ACCTGC | 1 cut(s) | 83 |
| BspPI | GGATC | 5 cut(s) | 236, 395, 408, 809, 1024 |
| BspT107I | GGYRCC | 1 cut(s) | 1282 |
| BsrI | ACTGG | 6 cut(s) | 153, 470, 493, 1131, 1219, 1249 |
| BssECI | CCNNGG | 2 cut(s) | 181, 1011 |
| BssMI | GATC | 6 cut(s) | 84, 241, 400, 652, 814, 1016 |
| Bst2UI | CCWGG | 1 cut(s) | 613 |
| Bst4CI | ACNGT | 2 cut(s) | 182, 452 |
| Bst6I | CTCTTC | 1 cut(s) | 283 |
| BstC8I | GCNNGC | 2 cut(s) | 123, 1240 |
| BstDEI | CTNAG | 4 cut(s) | 51, 104, 782, 835 |
| BstDSI | CCRYGG | 1 cut(s) | 181 |
| BstF5I | GGATG | 4 cut(s) | 193, 504, 882, 1189 |
| BstHHI | GCGC | 1 cut(s) | 726 |
| BstKTI | GATC | 6 cut(s) | 87, 244, 403, 655, 817, 1019 |
| BstMAI | GTCTC | 1 cut(s) | 833 |
| BstMBI | GATC | 6 cut(s) | 84, 241, 400, 652, 814, 1016 |
| BstMCI | CGRYCG | 1 cut(s) | 308 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 277, 608, 714, 723, 730, 1235 |
| BstNI | CCWGG | 1 cut(s) | 613 |
| BstSCI | CCNGG | 1 cut(s) | 611 |
| BstSLI | GKGCMC | 1 cut(s) | 1287 |
| BstV1I | GCAGC | 1 cut(s) | 112 |
| BstX2I | RGATCY | 2 cut(s) | 400, 1016 |
| BstYI | RGATCY | 2 cut(s) | 400, 1016 |
| BsuRI | GGCC | 2 cut(s) | 144, 1010 |
| BtgI | CCRYGG | 1 cut(s) | 181 |
| BtrI | CACGTC | 2 cut(s) | 529, 1043 |
| BtsCI | GGATG | 4 cut(s) | 193, 504, 882, 1189 |
| BtsI | GCAGTG | 1 cut(s) | 360 |
| BtsIMutI | CAGTG | 7 cut(s) | 360, 375, 500, 979, 1052, 1138, 1242 |
| BveI | ACCTGC | 1 cut(s) | 83 |
| Cac8I | GCNNGC | 2 cut(s) | 123, 1240 |
| CfoI | GCGC | 1 cut(s) | 726 |
| CseI | GACGC | 1 cut(s) | 20 |
| Csp6I | GTAC | 7 cut(s) | 44, 57, 410, 444, 537, 750, 979 |
| CviAII | CATG | 3 cut(s) | 463, 667, 1072 |
| CviQI | GTAC | 7 cut(s) | 44, 57, 410, 444, 537, 750, 979 |
| DdeI | CTNAG | 4 cut(s) | 51, 104, 782, 835 |
| DpnI | GATC | 6 cut(s) | 86, 243, 402, 654, 816, 1018 |
| DpnII | GATC | 6 cut(s) | 84, 241, 400, 652, 814, 1016 |
| DriI | GACNNNNNGTC | 1 cut(s) | 168 |
| Eam1104I | CTCTTC | 1 cut(s) | 283 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 168 |
| EarI | CTCTTC | 1 cut(s) | 283 |
| EciI | GGCGGA | 1 cut(s) | 864 |
| Ecl136II | GAGCTC | 1 cut(s) | 1152 |
| Eco24I | GRGCYC | 2 cut(s) | 949, 1154 |
| Eco53kI | GAGCTC | 1 cut(s) | 1152 |
| Eco57I | CTGAAG | 1 cut(s) | 399 |
| Eco88I | CYCGRG | 1 cut(s) | 1173 |
| EcoICRI | GAGCTC | 1 cut(s) | 1152 |
| EcoRI | GAATTC | 3 cut(s) | 174, 902, 1090 |
| EcoRII | CCWGG | 1 cut(s) | 611 |
| EcoT22I | ATGCAT | 1 cut(s) | 700 |
| EcoT38I | GRGCYC | 2 cut(s) | 949, 1154 |
| FaeI | CATG | 3 cut(s) | 466, 670, 1075 |
| FaqI | GGGAC | 2 cut(s) | 23, 31 |
| FatI | CATG | 3 cut(s) | 462, 666, 1071 |
| FauI | CCCGC | 1 cut(s) | 83 |
| Fnu4HI | GCNGC | 1 cut(s) | 126 |
| FokI | GGATG | 4 cut(s) | 180, 511, 889, 1196 |
| FriOI | GRGCYC | 2 cut(s) | 949, 1154 |
| Fsp4HI | GCNGC | 1 cut(s) | 126 |
| FspBI | CTAG | 2 cut(s) | 551, 845 |
| FspI | TGCGCA | 1 cut(s) | 725 |
| GlaI | GCGC | 1 cut(s) | 725 |
| GluI | GCNGC | 1 cut(s) | 126 |
| GsaI | CCCAGC | 1 cut(s) | 18 |
| HaeIII | GGCC | 2 cut(s) | 144, 1010 |
| HapII | CCGG | 1 cut(s) | 874 |
| HgaI | GACGC | 1 cut(s) | 20 |
| HhaI | GCGC | 1 cut(s) | 726 |
| Hin1II | CATG | 3 cut(s) | 466, 670, 1075 |
| Hin6I | GCGC | 1 cut(s) | 724 |
| HinP1I | GCGC | 1 cut(s) | 724 |
| HincII | GTYRAC | 1 cut(s) | 1038 |
| HindII | GTYRAC | 1 cut(s) | 1038 |
| HindIII | AAGCTT | 1 cut(s) | 1236 |
| HinfI | GANTC | 6 cut(s) | 19, 29, 189, 274, 917, 986 |
| HpaII | CCGG | 1 cut(s) | 874 |
| HphI | GGTGA | 2 cut(s) | 170, 866 |
| Hpy166II | GTNNAC | 3 cut(s) | 57, 979, 1038 |
| Hpy188I | TCNGA | 5 cut(s) | 516, 746, 896, 991, 1096 |
| Hpy8I | GTNNAC | 3 cut(s) | 57, 979, 1038 |
| Hpy99I | CGWCG | 2 cut(s) | 288, 900 |
| HpyAV | CCTTC | 4 cut(s) | 134, 304, 686, 1000 |
| HpyCH4III | ACNGT | 2 cut(s) | 182, 452 |
| HpyCH4IV | ACGT | 3 cut(s) | 283, 528, 1042 |
| HpyCH4V | TGCA | 4 cut(s) | 128, 295, 698, 1242 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 277, 608, 714, 723, 730, 1235 |
| HpyF3I | CTNAG | 4 cut(s) | 51, 104, 782, 835 |
| HpySE526I | ACGT | 3 cut(s) | 283, 528, 1042 |
| Hsp92II | CATG | 3 cut(s) | 466, 670, 1075 |
| HspAI | GCGC | 1 cut(s) | 724 |
| Kpn2I | TCCGGA | 1 cut(s) | 873 |
| Kzo9I | GATC | 6 cut(s) | 84, 241, 400, 652, 814, 1016 |
| LmnI | GCTCC | 1 cut(s) | 665 |
| Lsp1109I | GCAGC | 1 cut(s) | 112 |
| LweI | GCATC | 5 cut(s) | 489, 685, 711, 867, 1216 |
| MaeI | CTAG | 2 cut(s) | 551, 845 |
| MaeII | ACGT | 3 cut(s) | 283, 528, 1042 |
| MaeIII | GTNAC | 2 cut(s) | 472, 854 |
| MalI | GATC | 6 cut(s) | 86, 243, 402, 654, 816, 1018 |
| MboI | GATC | 6 cut(s) | 84, 241, 400, 652, 814, 1016 |
| MboII | GAAGA | 4 cut(s) | 300, 326, 392, 995 |
| MflI | RGATCY | 2 cut(s) | 400, 1016 |
| MhlI | GDGCHC | 4 cut(s) | 254, 949, 1154, 1287 |
| MluCI | AATT | 8 cut(s) | 174, 201, 739, 798, 902, 1090, 1110, 1219 |
| MlyI | GAGTC | 1 cut(s) | 13 |
| MmeI | TCCRAC | 2 cut(s) | 322, 919 |
| MnlI | CCTC | 7 cut(s) | 200, 728, 766, 845, 1006, 1056, 1076 |
| Mph1103I | ATGCAT | 1 cut(s) | 700 |
| MroI | TCCGGA | 1 cut(s) | 873 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1090 |
| MseI | TTAA | 1 cut(s) | 167 |
| MslI | CAYNNNNRTG | 2 cut(s) | 703, 1045 |
| MspI | CCGG | 1 cut(s) | 874 |
| MspR9I | CCNGG | 1 cut(s) | 613 |
| MvaI | CCWGG | 1 cut(s) | 613 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 277, 608, 714, 723, 730, 1235 |
| NdeII | GATC | 6 cut(s) | 84, 241, 400, 652, 814, 1016 |
| NlaIII | CATG | 3 cut(s) | 466, 670, 1075 |
| NlaIV | GGNNCC | 3 cut(s) | 402, 468, 1284 |
| NmeAIII | GCCGAG | 1 cut(s) | 1036 |
| NmuCI | GTSAC | 1 cut(s) | 854 |
| NsbI | TGCGCA | 1 cut(s) | 725 |
| NsiI | ATGCAT | 1 cut(s) | 700 |
| OliI | CACNNNNGTG | 1 cut(s) | 1045 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 178, 283 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1090 |
| PfeI | GAWTC | 5 cut(s) | 29, 189, 274, 917, 986 |
| PflFI | GACNNNGTC | 1 cut(s) | 968 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 434 |
| PkrI | GCNGC | 1 cut(s) | 127 |
| PleI | GAGTC | 1 cut(s) | 13 |
| PpsI | GAGTC | 1 cut(s) | 13 |
| Psp124BI | GAGCTC | 1 cut(s) | 1154 |
| Psp6I | CCWGG | 1 cut(s) | 611 |
| PspFI | CCCAGC | 1 cut(s) | 14 |
| PspGI | CCWGG | 1 cut(s) | 611 |
| PspN4I | GGNNCC | 3 cut(s) | 402, 468, 1284 |
| PsuI | RGATCY | 2 cut(s) | 400, 1016 |
| PsyI | GACNNNGTC | 1 cut(s) | 968 |
| RsaI | GTAC | 7 cut(s) | 45, 58, 411, 445, 538, 751, 980 |
| RsaNI | GTAC | 7 cut(s) | 44, 57, 410, 444, 537, 750, 979 |
| RseI | CAYNNNNRTG | 2 cut(s) | 703, 1045 |
| SacI | GAGCTC | 1 cut(s) | 1154 |
| SaqAI | TTAA | 1 cut(s) | 167 |
| SatI | GCNGC | 1 cut(s) | 126 |
| Sau3AI | GATC | 6 cut(s) | 84, 241, 400, 652, 814, 1016 |
| ScaI | AGTACT | 1 cut(s) | 411 |
| SchI | GAGTC | 1 cut(s) | 13 |
| ScrFI | CCNGG | 1 cut(s) | 613 |
| SduI | GDGCHC | 4 cut(s) | 254, 949, 1154, 1287 |
| SfaNI | GCATC | 5 cut(s) | 489, 685, 711, 867, 1216 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 703, 1045 |
| SmlI | CTYRAG | 2 cut(s) | 804, 950 |
| SmoI | CTYRAG | 2 cut(s) | 804, 950 |
| SpeI | ACTAGT | 1 cut(s) | 550 |
| Sse9I | AATT | 8 cut(s) | 174, 201, 739, 798, 902, 1090, 1110, 1219 |
| SsiI | CCGC | 2 cut(s) | 76, 849 |
| SspMI | CTAG | 2 cut(s) | 551, 845 |
| SstI | GAGCTC | 1 cut(s) | 1154 |
| StyD4I | CCNGG | 1 cut(s) | 611 |
| TaaI | ACNGT | 2 cut(s) | 182, 452 |
| TaiI | ACGT | 3 cut(s) | 286, 531, 1045 |
| TaqI | TCGA | 3 cut(s) | 172, 286, 308 |
| TaqII | GACCGA | 1 cut(s) | 294 |
| TasI | AATT | 8 cut(s) | 174, 201, 739, 798, 902, 1090, 1110, 1219 |
| TatI | WGTACW | 3 cut(s) | 56, 409, 443 |
| TfiI | GAWTC | 5 cut(s) | 29, 189, 274, 917, 986 |
| Tru1I | TTAA | 1 cut(s) | 167 |
| Tru9I | TTAA | 1 cut(s) | 167 |
| TscAI | CASTG | 7 cut(s) | 367, 382, 500, 979, 1052, 1138, 1249 |
| TseFI | GTSAC | 1 cut(s) | 854 |
| TseI | GCWGC | 1 cut(s) | 125 |
| Tsp45I | GTSAC | 1 cut(s) | 854 |
| TspDTI | ATGAA | 5 cut(s) | 54, 276, 702, 815, 1088 |
| TspGWI | ACGGA | 1 cut(s) | 491 |
| TspRI | CASTG | 7 cut(s) | 367, 382, 500, 979, 1052, 1138, 1249 |
| Tth111I | GACNNNGTC | 1 cut(s) | 968 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 434 |
| XapI | RAATTY | 5 cut(s) | 174, 739, 902, 1090, 1219 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1090 |
| XspI | CTAG | 2 cut(s) | 551, 845 |
| ZrmI | AGTACT | 1 cut(s) | 411 |
| Zsp2I | ATGCAT | 1 cut(s) | 700 |