Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0007138

Physical Location & Seq

Genomic Coordinates Forward (+)

15579725 .. 15584803

Gene Structure 5079 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0167900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2283 bp

ATGTGGAGCTCTTGTGCTCTGGTTGTTATACTACTTGCTTCTCTTCTTCTTCTTCTTCACTTGGTAGCTCTGGTCTCTGCTGATCAGGGCTCCACCACTAGTCAGTGGCAAACACTCAAAGGGAAGCCGCCTTTGGTCATAGCACGCGGGGGTTTTTCAGGACTATTACCTGGTTCTAGTTCTGACGCATACAAGTTAACATTGTCCACTAGTGTACCAGATGTGTTATTTTGGTGCGATGTCCAACTAACAAAGGAAGGAGCTGGAATTTGCTTTCCAGATCTGCTACTGAATAACAATTCTAATGTTGATATCATCTATCCAAAGAAGGACAAGACTTACATAGTTAATGGAGTTCCTACTGGCGGATGGTTCACCATCGATTATACTCTCAAGGACCTTGCAAATGTTTATATTACTCAGGGAGTATTTAGTCGAGCTAATAGGTTTGATGACAATATGTACCCAATTCTCACCGTTGAAGATGTGGCTATCAATTTGACAGCACCAGGCTTATGGTTGAATATTGAGAACAATATCTTCTTCTCACAACACAACTTGAGCGTGAGAAACTTTGTGCTTTCTGTAATGAGAAAAGTGGTTGTGAATTATATCTCATCACCGGAGGTGGCTTTCCTGAACAGTATTAAAGGAGTTGTTAATCCAAGAACTACCAAGTTGGTCTTTCAGTTTCTGGAACAAACTGAGATTGAGCCTTCAATCAATCAAACTTATGGATCTCTGTTAAAGAATCTCACATTCATCAAGACATTTGCCTCAGGAATTCTAGTTCCTAAAACTTACATATGGCCCGTCACTAATGACAATTATTTAGAACCACACACTTCACTTGTTTTGGATGCTCATACAGCAGAACTAATGGTATTTGTGTCCGATTTGGTGAATGATGTGCCATTACCCTACAACTACAGTTATGATCCATTAGCTGAGTGCCTGTCATTCATAGACAATGGCAACTTCACTGTTGATGGTGTGCTGTCTGATTTTCCGATAACTCCATCAGCAGCCATAGATTGCTTTGCTCACCTAAGACAAAATGCTCCAGTGCAAGACAAGCCTTTGGTTATTTCGAAAAATGGAGCAAGCGGAGACTACCCTGATTGTACTGATTTGGCATATATGAAAGCACTTGAAGATGGTGTGAATGTACTCGATTGTCCTATCCAAATGTCCAAGGACGGGATACCATTTTGCTCCAGTTCTATAAATCTCATTCATACCACAACAGTTGCTCAATCAAGTTTTCAGAACTTAACAATGGTTGTTCCGGAGATTCAGGCTGACAATGGAATATATACCTTTAGCCTGACATGGGATCAGATCAAGACATTACAACCAAGTATATCAAACCCCCAGCAGAGGTACAAGTTGTACAGGAATCCAAGGTTCAAAAATGCTGGGACTTACTTGAGACTATCTGATTTTTTTACCTTGGCAAAGAACAGGAGCTCTGTTTCAGGTGTCTTAATCAGCGTAGAGTATGCAGCATATCTTGCAGAGAAGCAGGGATTAAGTGTAACAGATGCAGTCATTAATGAGTTGAACAAAGCTGGTTTGGACAATCAGACAGCCCTAGATGTCATGATTCAGTCCACTAATAGTTCTGTTCTAATGAAATTTAAGGACGAAAGCAAGTGTAAACTTGTTTACAAGATTGAAGAAGTTATTGGTGATGCCCTTAATACAACTCTTCAGGACATCAAGAAGTTTGCCAATTCTGTGGTCATCAACAAGGCCTCTGTCCTTCCTGAAAATAGTGAATACATCACTGGAGCAACCAATGTTGTAACAAAGCTGCATGCATTTGATCTTCCTGTTTATGTCGAACTGTTCAGCAATGAGTATGTATCTCAAGCATGGGACTTCTTCTCTGATCCGACTGTTGAGATCAATTCATTCGTCTCCGGGGCCAATATTGATGGTGTTATCACAGACTTCCCCAAAACAGCTGCTAGATACAAAAGAAACAAGTGTTTATTTTATAAAGAGAGACCTAGCTACATGAACCCTGTTCCACCAGGCGCGCTGTTAGCAGTTGTTTCTCCTCGTCAATTGCCACCGGCTGAGGCTCCGAATCCAGTGCTGATAGAGAGTGATGTGATTGAGCCACCTTTGCCTTCCGCCTTAGCTCCAGGGATCACCAATGGATCTACAGTAGCACCACCACCACCACCACCTCCAAACGGGCAGCCTAAGATTGCTGCATGCTGCTTCTTTCTCTCAAATCTGGCTTTGCTTGTTGCCACCCTTTTACTGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030695 GO:0031267 GO:0031338 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044424 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0098772

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

RabGAP-TBC

Protein Analysis

760

Amino Acids

83.39

Weight (kDa)

5.03

Isoelectric Point (pI)

39.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GDPD	PF03009	367 - 656	3.2e-24	Glycerophosphoryl diester phosphodiesterase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007138)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G27100 AT4G27100 AT5G54780
fragaria_vesca	FvH4_3g21970 FvH4_3g21970 FvH4_3g21970 FvH4_3g21970 FvH4_3g21970 FvH4_3g21970
malus_domestica	MD03G1209800.v1.1 MD11G1224500.v1.1
prunus_persica	Prupe.4G205400_v2.0.a1 Prupe.4G205400_v2.0.a1
pyrus_communis	pycom03g15870 pycom11g19820
rosa_chinensis	RchiOBHm_Chr5g0037821
rosa_laevigata	RLG00000033813
rosa_multiflora	Rmu_sc0005416.1_g000010
rosa_roxburghii	Rroxscaffold_1G00043100
rosa_rugosa	Rorug05G0167900
rosa_samantha	Rh5AG256700 Rh5BG259100 Rh5CG292100 Rh5DG269000
rosa_wichuraiana	Rw5G023800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2004
AccII	CGCG	2 cut(s)	147, 2045
AccIII	TCCGGA	1 cut(s)	1288
AciI	CCGC	5 cut(s)	128, 147, 366, 1107, 2142
AclWI	GGATC	6 cut(s)	745, 932, 1344, 1889, 2165, 2176
AcsI	RAATTY	3 cut(s)	267, 783, 1637
AcuI	CTGAAG	1 cut(s)	1697
AfaI	GTAC	6 cut(s)	216, 464, 1126, 1170, 1385, 1394
AfiI	CCNNNNNNNGG	5 cut(s)	365, 1200, 1333, 1380, 2204
AgsI	TTSAA	7 cut(s)	482, 523, 720, 1154, 1411, 1564, 1679
AhlI	ACTAGT	2 cut(s)	98, 209
AjnI	CCWGG	4 cut(s)	169, 508, 2038, 2152
AjuI	GAANNNNNNNTTGG	4 cut(s)	116, 148, 1671, 1703
AloI	GAACNNNNNNTCC	2 cut(s)	774, 806
Alw21I	GWGCWC	3 cut(s)	11, 19, 1472
Alw26I	GTCTC	5 cut(s)	79, 1104, 1426, 1927, 2005
AlwI	GGATC	6 cut(s)	745, 932, 1344, 1889, 2165, 2176
AlwNI	CAGNNNCTG	1 cut(s)	694
Aor13HI	TCCGGA	1 cut(s)	1288
AoxI	GGCC	3 cut(s)	809, 1755, 1929
ApeKI	GCWGC	7 cut(s)	1025, 1505, 1816, 1970, 2209, 2222, 2229
ApoI	RAATTY	3 cut(s)	267, 783, 1637
AseI	ATTAAT	1 cut(s)	1554
AspLEI	GCGC	2 cut(s)	2045, 2047
AspS9I	GGNCC	3 cut(s)	397, 810, 1929
AsuC2I	CCSGG	1 cut(s)	1927
AsuHPI	GGTGA	7 cut(s)	367, 466, 612, 913, 1037, 1703, 2152
AsuII	TTCGAA	1 cut(s)	1091
AvaII	GGWCC	1 cut(s)	397
AxyI	CCTNAGG	1 cut(s)	778
BaeI	ACNNNNGTAYC	2 cut(s)	198, 231
BanII	GRGCYC	3 cut(s)	11, 92, 1472
Bbv12I	GWGCWC	3 cut(s)	11, 19, 1472
BbvCI	CCTCAGC	1 cut(s)	2085
BbvI	GCAGC	7 cut(s)	1037, 1517, 1803, 1957, 2209, 2216, 2221
BccI	CCATC	6 cut(s)	363, 386, 983, 1027, 1151, 1934
BcgI	CGANNNNNNTGC	2 cut(s)	2083, 2117
BciT130I	CCWGG	4 cut(s)	171, 510, 2040, 2154
BciVI	GTATCC	1 cut(s)	1197
BclI	TGATCA	1 cut(s)	82
BcnI	CCSGG	1 cut(s)	1927
BcoDI	GTCTC	5 cut(s)	79, 1104, 1426, 1927, 2005
BcuI	ACTAGT	2 cut(s)	98, 209
BfaI	CTAG	7 cut(s)	99, 177, 210, 788, 1595, 1974, 2016
BfmI	CTRYAG	2 cut(s)	928, 2172
BfuI	GTATCC	1 cut(s)	1197
BglII	AGATCT	1 cut(s)	280
BisI	GCNGC	8 cut(s)	128, 1026, 1506, 1817, 1971, 2210, 2223, 2230
BlsI	GCNGC	8 cut(s)	129, 1027, 1507, 1818, 1972, 2211, 2224, 2231
Bme1390I	CCNGG	5 cut(s)	171, 510, 1927, 2040, 2154
Bme18I	GGWCC	1 cut(s)	397
BmgT120I	GGNCC	3 cut(s)	397, 810, 1929
BmiI	GGNNCC	3 cut(s)	91, 1930, 2091
BmrFI	CCNGG	5 cut(s)	171, 510, 1927, 2040, 2154
BmsI	GCATC	3 cut(s)	850, 1534, 1684
BpmI	CTGGAG	4 cut(s)	1047, 1201, 1812, 2136
Bpu10I	CCTNAGC	2 cut(s)	2085, 2146
Bpu14I	TTCGAA	1 cut(s)	1091
BpuEI	CTTGAG	4 cut(s)	377, 580, 1450, 1857
BpuMI	CCSGG	1 cut(s)	1927
Bsa29I	ATCGAT	1 cut(s)	381
BsaI	GGTCTC	2 cut(s)	79, 2005
BsaJI	CCNNGG	5 cut(s)	1194, 1403, 1452, 1926, 2153
BsaWI	WCCGGW	2 cut(s)	622, 1288
BsaXI	ACNNNNNCTCC	1 cut(s)	28
Bsc4I	CCNNNNNNNGG	5 cut(s)	365, 1200, 1333, 1380, 2204
Bse118I	RCCGGY	1 cut(s)	2080
Bse1I	ACTGG	5 cut(s)	367, 1064, 1218, 1795, 2099
Bse21I	CCTNAGG	1 cut(s)	778
Bse3DI	GCAATG	1 cut(s)	1864
BseAI	TCCGGA	1 cut(s)	1288
BseBI	CCWGG	4 cut(s)	171, 510, 2040, 2154
BseCI	ATCGAT	1 cut(s)	381
BseDI	CCNNGG	5 cut(s)	1194, 1403, 1452, 1926, 2153
BseGI	GGATG	2 cut(s)	374, 865
BseLI	CCNNNNNNNGG	5 cut(s)	365, 1200, 1333, 1380, 2204
BseMI	GCAATG	1 cut(s)	1864
BseMII	CTCAG	5 cut(s)	434, 696, 792, 939, 2076
BseNI	ACTGG	5 cut(s)	367, 1064, 1218, 1795, 2099
BsePI	GCGCGC	1 cut(s)	2043
BseRI	GAGGAG	1 cut(s)	2055
BseXI	GCAGC	7 cut(s)	1037, 1517, 1803, 1957, 2209, 2216, 2221
BseYI	CCCAGC	2 cut(s)	1374, 1418
Bsh1236I	CGCG	2 cut(s)	147, 2045
BshFI	GGCC	3 cut(s)	811, 1757, 1931
BshVI	ATCGAT	1 cut(s)	381
BsiHKAI	GWGCWC	3 cut(s)	11, 19, 1472
BsiSI	CCGG	4 cut(s)	623, 1289, 1926, 2081
BslFI	GGGAC	2 cut(s)	1435, 1895
BslI	CCNNNNNNNGG	5 cut(s)	365, 1200, 1333, 1380, 2204
BsmAI	GTCTC	5 cut(s)	79, 1104, 1426, 1927, 2005
BsmBI	CGTCTC	1 cut(s)	1927
BsmFI	GGGAC	2 cut(s)	1435, 1895
BsnI	GGCC	3 cut(s)	811, 1757, 1931
Bso31I	GGTCTC	2 cut(s)	79, 2005
Bsp119I	TTCGAA	1 cut(s)	1091
Bsp1286I	GDGCHC	4 cut(s)	11, 19, 92, 1472
Bsp13I	TCCGGA	1 cut(s)	1288
Bsp1407I	TGTACA	1 cut(s)	1392
BspACI	CCGC	5 cut(s)	128, 147, 366, 1107, 2142
BspANI	GGCC	3 cut(s)	811, 1757, 1931
BspCNI	CTCAG	5 cut(s)	433, 697, 791, 940, 2077
BspDI	ATCGAT	1 cut(s)	381
BspEI	TCCGGA	1 cut(s)	1288
BspFNI	CGCG	2 cut(s)	147, 2045
BspHI	TCATGA	1 cut(s)	1602
BspLI	GGNNCC	3 cut(s)	91, 1930, 2091
BspPI	GGATC	6 cut(s)	745, 932, 1344, 1889, 2165, 2176
BspT104I	TTCGAA	1 cut(s)	1091
BspTNI	GGTCTC	2 cut(s)	79, 2005
BsrDI	GCAATG	1 cut(s)	1864
BsrFI	RCCGGY	1 cut(s)	2080
BsrGI	TGTACA	1 cut(s)	1392
BsrI	ACTGG	5 cut(s)	367, 1064, 1218, 1795, 2099
BssAI	RCCGGY	1 cut(s)	2080
BssECI	CCNNGG	5 cut(s)	1194, 1403, 1452, 1926, 2153
BssHII	GCGCGC	1 cut(s)	2043
BssT1I	CCWWGG	3 cut(s)	1194, 1403, 1452
Bst2UI	CCWGG	4 cut(s)	171, 510, 2040, 2154
Bst4CI	ACNGT	8 cut(s)	478, 644, 932, 985, 1249, 1851, 1903, 2176
Bst6I	CTCTTC	2 cut(s)	48, 1716
BstAPI	GCANNNNNTGC	1 cut(s)	1514
BstAUI	TGTACA	1 cut(s)	1392
BstBI	TTCGAA	1 cut(s)	1091
BstC8I	GCNNGC	5 cut(s)	145, 1105, 1821, 2045, 2227
BstDEI	CTNAG	8 cut(s)	420, 705, 778, 948, 1049, 2085, 2146, 2214
BstF5I	GGATG	2 cut(s)	374, 865
BstFNI	CGCG	2 cut(s)	147, 2045
BstHHI	GCGC	2 cut(s)	2045, 2047
BstMAI	GTCTC	5 cut(s)	79, 1104, 1426, 1927, 2005
BstMWI	GCNNNNNNNGC	5 cut(s)	869, 1075, 1514, 2051, 2134
BstNI	CCWGG	4 cut(s)	171, 510, 2040, 2154
BstNSI	RCATGY	2 cut(s)	1823, 2229
BstSCI	CCNGG	5 cut(s)	169, 508, 1925, 2038, 2152
BstSFI	CTRYAG	2 cut(s)	928, 2172
BstUI	CGCG	2 cut(s)	147, 2045
BstV1I	GCAGC	7 cut(s)	1037, 1517, 1803, 1957, 2209, 2216, 2221
BstX2I	RGATCY	3 cut(s)	280, 737, 2168
BstXI	CCANNNNNNTGG	2 cut(s)	516, 1741
BstYI	RGATCY	3 cut(s)	280, 737, 2168
Bsu15I	ATCGAT	1 cut(s)	381
Bsu36I	CCTNAGG	1 cut(s)	778
BsuI	GTATCC	1 cut(s)	1197
BsuRI	GGCC	3 cut(s)	811, 1757, 1931
BsuTUI	ATCGAT	1 cut(s)	381
BtgZI	GCGATG	1 cut(s)	252
BtsCI	GGATG	2 cut(s)	374, 865
BtsIMutI	CAGTG	5 cut(s)	110, 981, 1071, 1788, 2106
Cac8I	GCNNGC	5 cut(s)	145, 1105, 1821, 2045, 2227
CaiI	CAGNNNCTG	1 cut(s)	694
CciI	TCATGA	1 cut(s)	1602
CfoI	GCGC	2 cut(s)	2045, 2047
Cfr10I	RCCGGY	1 cut(s)	2080
Cfr13I	GGNCC	3 cut(s)	397, 810, 1929
ClaI	ATCGAT	1 cut(s)	381
CseI	GACGC	1 cut(s)	194
CsiI	ACCWGGT	1 cut(s)	169
Csp6I	GTAC	6 cut(s)	215, 463, 1125, 1169, 1384, 1393
CspCI	CAANNNNNGTGG	2 cut(s)	1231, 1266
CviAII	CATG	6 cut(s)	1332, 1603, 1820, 1878, 2023, 2226
CviQI	GTAC	6 cut(s)	215, 463, 1125, 1169, 1384, 1393
DdeI	CTNAG	8 cut(s)	420, 705, 778, 948, 1049, 2085, 2146, 2214
Eam1104I	CTCTTC	2 cut(s)	48, 1716
EarI	CTCTTC	2 cut(s)	48, 1716
EciI	GGCGGA	2 cut(s)	381, 2131
Ecl136II	GAGCTC	2 cut(s)	9, 1470
Eco130I	CCWWGG	3 cut(s)	1194, 1403, 1452
Eco147I	AGGCCT	1 cut(s)	1757
Eco24I	GRGCYC	3 cut(s)	11, 92, 1472
Eco31I	GGTCTC	2 cut(s)	79, 2005
Eco32I	GATATC	1 cut(s)	313
Eco47I	GGWCC	1 cut(s)	397
Eco53kI	GAGCTC	2 cut(s)	9, 1470
Eco57I	CTGAAG	1 cut(s)	1697
Eco81I	CCTNAGG	1 cut(s)	778
EcoICRI	GAGCTC	2 cut(s)	9, 1470
EcoO109I	RGGNCCY	1 cut(s)	397
EcoRI	GAATTC	1 cut(s)	783
EcoRII	CCWGG	4 cut(s)	169, 508, 2038, 2152
EcoRV	GATATC	1 cut(s)	313
EcoT14I	CCWWGG	3 cut(s)	1194, 1403, 1452
EcoT22I	ATGCAT	1 cut(s)	1825
EcoT38I	GRGCYC	3 cut(s)	11, 92, 1472
ErhI	CCWWGG	3 cut(s)	1194, 1403, 1452
Esp3I	CGTCTC	1 cut(s)	1927
FaeI	CATG	6 cut(s)	1335, 1606, 1823, 1881, 2026, 2229
FalI	AAGNNNNNCTT	2 cut(s)	668, 700
FaqI	GGGAC	2 cut(s)	1435, 1895
FatI	CATG	6 cut(s)	1331, 1602, 1819, 1877, 2022, 2225
FauI	CCCGC	1 cut(s)	140
FauNDI	CATATG	1 cut(s)	806
FbaI	TGATCA	1 cut(s)	82
Fnu4HI	GCNGC	8 cut(s)	128, 1026, 1506, 1817, 1971, 2210, 2223, 2230
FokI	GGATG	2 cut(s)	381, 872
FriOI	GRGCYC	3 cut(s)	11, 92, 1472
Fsp4HI	GCNGC	8 cut(s)	128, 1026, 1506, 1817, 1971, 2210, 2223, 2230
FspBI	CTAG	7 cut(s)	99, 177, 210, 788, 1595, 1974, 2016
GlaI	GCGC	2 cut(s)	2044, 2046
GluI	GCNGC	8 cut(s)	128, 1026, 1506, 1817, 1971, 2210, 2223, 2230
GsaI	CCCAGC	2 cut(s)	1378, 1422
GsuI	CTGGAG	4 cut(s)	1047, 1201, 1812, 2136
HaeIII	GGCC	3 cut(s)	811, 1757, 1931
HapII	CCGG	4 cut(s)	623, 1289, 1926, 2081
HgaI	GACGC	1 cut(s)	194
HhaI	GCGC	2 cut(s)	2045, 2047
Hin1II	CATG	6 cut(s)	1335, 1606, 1823, 1881, 2026, 2229
Hin6I	GCGC	2 cut(s)	2043, 2045
HinP1I	GCGC	2 cut(s)	2043, 2045
HincII	GTYRAC	1 cut(s)	198
HindII	GTYRAC	1 cut(s)	198
HinfI	GANTC	5 cut(s)	751, 1294, 1399, 1606, 2095
HpaI	GTTAAC	1 cut(s)	198
HpaII	CCGG	4 cut(s)	623, 1289, 1926, 2081
HphI	GGTGA	7 cut(s)	367, 466, 612, 913, 1037, 1703, 2152
Hpy166II	GTNNAC	7 cut(s)	198, 207, 215, 375, 1614, 1661, 1669
Hpy8I	GTNNAC	7 cut(s)	198, 207, 215, 375, 1614, 1661, 1669
HpyAV	CCTTC	5 cut(s)	251, 322, 726, 1775, 2148
HpyCH4III	ACNGT	8 cut(s)	478, 644, 932, 985, 1249, 1851, 1903, 2176
HpyCH4V	TGCA	8 cut(s)	404, 1069, 1505, 1517, 1547, 1819, 1823, 2225
HpyF10VI	GCNNNNNNNGC	5 cut(s)	869, 1075, 1514, 2051, 2134
HpyF3I	CTNAG	8 cut(s)	420, 705, 778, 948, 1049, 2085, 2146, 2214
Hsp92II	CATG	6 cut(s)	1335, 1606, 1823, 1881, 2026, 2229
HspAI	GCGC	2 cut(s)	2043, 2045
Kpn2I	TCCGGA	1 cut(s)	1288
Ksp22I	TGATCA	1 cut(s)	82
KspAI	GTTAAC	1 cut(s)	198
Lsp1109I	GCAGC	7 cut(s)	1037, 1517, 1803, 1957, 2209, 2216, 2221
LweI	GCATC	3 cut(s)	850, 1534, 1684
MabI	ACCWGGT	1 cut(s)	169
MaeI	CTAG	7 cut(s)	99, 177, 210, 788, 1595, 1974, 2016
MaeIII	GTNAC	3 cut(s)	814, 1537, 1807
MfeI	CAATTG	1 cut(s)	2072
MflI	RGATCY	3 cut(s)	280, 737, 2168
MhlI	GDGCHC	4 cut(s)	11, 19, 92, 1472
MmeI	TCCRAC	2 cut(s)	268, 1922
MnlI	CCTC	7 cut(s)	619, 787, 1374, 1768, 2076, 2080, 2208
Mph1103I	ATGCAT	1 cut(s)	1825
MroI	TCCGGA	1 cut(s)	1288
MspA1I	CMGCKG	1 cut(s)	1970
MspI	CCGG	4 cut(s)	623, 1289, 1926, 2081
MspR9I	CCNGG	5 cut(s)	171, 510, 1927, 2040, 2154
MunI	CAATTG	1 cut(s)	2072
MvaI	CCWGG	4 cut(s)	171, 510, 2040, 2154
MvnI	CGCG	2 cut(s)	147, 2045
MwoI	GCNNNNNNNGC	5 cut(s)	869, 1075, 1514, 2051, 2134
NciI	CCSGG	1 cut(s)	1927
NdeI	CATATG	1 cut(s)	806
NlaIII	CATG	6 cut(s)	1335, 1606, 1823, 1881, 2026, 2229
NlaIV	GGNNCC	3 cut(s)	91, 1930, 2091
NmuCI	GTSAC	1 cut(s)	814
NsiI	ATGCAT	1 cut(s)	1825
NspI	RCATGY	2 cut(s)	1823, 2229
NspV	TTCGAA	1 cut(s)	1091
PaeI	GCATGC	2 cut(s)	1823, 2229
PagI	TCATGA	1 cut(s)	1602
PauI	GCGCGC	1 cut(s)	2043
PceI	AGGCCT	1 cut(s)	1757
PfeI	GAWTC	5 cut(s)	751, 1294, 1399, 1606, 2095
PkrI	GCNGC	8 cut(s)	129, 1027, 1507, 1818, 1972, 2211, 2224, 2231
PpuMI	RGGWCCY	1 cut(s)	397
PshBI	ATTAAT	1 cut(s)	1554
PsiI	TTATAA	1 cut(s)	2004
Psp124BI	GAGCTC	2 cut(s)	11, 1472
Psp5II	RGGWCCY	1 cut(s)	397
Psp6I	CCWGG	4 cut(s)	169, 508, 2038, 2152
PspFI	CCCAGC	2 cut(s)	1374, 1418
PspGI	CCWGG	4 cut(s)	169, 508, 2038, 2152
PspN4I	GGNNCC	3 cut(s)	91, 1930, 2091
PspPI	GGNCC	3 cut(s)	397, 810, 1929
PspPPI	RGGWCCY	1 cut(s)	397
PstNI	CAGNNNCTG	1 cut(s)	694
PsuI	RGATCY	3 cut(s)	280, 737, 2168
PteI	GCGCGC	1 cut(s)	2043
PvuII	CAGCTG	1 cut(s)	1970
RsaI	GTAC	6 cut(s)	216, 464, 1126, 1170, 1385, 1394
RsaNI	GTAC	6 cut(s)	215, 463, 1125, 1169, 1384, 1393
SacI	GAGCTC	2 cut(s)	11, 1472
SatI	GCNGC	8 cut(s)	128, 1026, 1506, 1817, 1971, 2210, 2223, 2230
Sau96I	GGNCC	3 cut(s)	397, 810, 1929
ScrFI	CCNGG	5 cut(s)	171, 510, 1927, 2040, 2154
SduI	GDGCHC	4 cut(s)	11, 19, 92, 1472
SexAI	ACCWGGT	1 cut(s)	169
SfaNI	GCATC	3 cut(s)	850, 1534, 1684
SfcI	CTRYAG	2 cut(s)	928, 2172
SfuI	TTCGAA	1 cut(s)	1091
SinI	GGWCC	1 cut(s)	397
SmlI	CTYRAG	4 cut(s)	392, 559, 1429, 1872
SmoI	CTYRAG	4 cut(s)	392, 559, 1429, 1872
SpeI	ACTAGT	2 cut(s)	98, 209
SphI	GCATGC	2 cut(s)	1823, 2229
SseBI	AGGCCT	1 cut(s)	1757
SsiI	CCGC	5 cut(s)	128, 147, 366, 1107, 2142
SspI	AATATT	2 cut(s)	526, 1936
SspMI	CTAG	7 cut(s)	99, 177, 210, 788, 1595, 1974, 2016
SstI	GAGCTC	2 cut(s)	11, 1472
StuI	AGGCCT	1 cut(s)	1757
StyD4I	CCNGG	5 cut(s)	169, 508, 1925, 2038, 2152
StyI	CCWWGG	3 cut(s)	1194, 1403, 1452
TaaI	ACNGT	8 cut(s)	478, 644, 932, 985, 1249, 1851, 1903, 2176
TaqI	TCGA	5 cut(s)	381, 436, 1091, 1173, 1845
TatI	WGTACW	3 cut(s)	1124, 1168, 1392
TauI	GCSGC	1 cut(s)	130
TfiI	GAWTC	5 cut(s)	751, 1294, 1399, 1606, 2095
TscAI	CASTG	5 cut(s)	110, 988, 1071, 1795, 2106
TseFI	GTSAC	1 cut(s)	814
TseI	GCWGC	7 cut(s)	1025, 1505, 1816, 1970, 2209, 2222, 2229
Tsp45I	GTSAC	1 cut(s)	814
TspDTI	ATGAA	7 cut(s)	751, 952, 1157, 1226, 1649, 1905, 2039
TspRI	CASTG	5 cut(s)	110, 988, 1071, 1795, 2106
VpaK11BI	GGWCC	1 cut(s)	397
VspI	ATTAAT	1 cut(s)	1554
XapI	RAATTY	3 cut(s)	267, 783, 1637
XceI	RCATGY	2 cut(s)	1823, 2229
XspI	CTAG	7 cut(s)	99, 177, 210, 788, 1595, 1974, 2016
Zsp2I	ATGCAT	1 cut(s)	1825

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.