Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0008295

Physical Location & Seq

Genomic Coordinates Forward (+)

40620349 .. 40633301

Gene Structure 12953 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1286500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGGACCTTCGCCGACCTAACAATGGGCCAATAAATATCGTGTCTAATGCAAAACGAGCGAGTAAAGCAGAGGATTATTTCCTCCACCTTAAAGATGAGCCGTTTCCCAGCTTAACCGAACTGAACAGTCCCGCTGCTCCGTGTTGCTCTATCAGTCCCGCCATGGAAGCCACTCTTCTCAGCTCGCAACGCTTCCATCCCAAACTCTCGCCCGTAAAATCTCGAGGTGCAGTTTCAGGCTGTGAAATTCAAATTTGTTGTTTGCCAATTGTTAGGAATAGTTGCTATGTTTCCCTTAGGACAAACCCTAGAAATTTCATGTTGCCAAACAGGCCCTTATTGTCCAGAGTGAACAGAAGAGTCTCCGCTAAGTTTTCGAACCAGTTCCTAAATGATTATACAAATGTTGAGGCTACGCCTCCAGAGTCTCTAAAGGTTGAAGTTAATCCGTTGAGTGGGAGTGACGGGACGGAAATTTCGAAACAGAACAAGGTTGAGAATGTAAAGGATGAGCAGGCCAGACCTATGACGTTTAGAAACCGGTTTTTGAATTTCGTGCGCCTGAGTTCAGTGGTTAGTAATGCTGCTGAGTCGTTCTTCAAGAGCGAGATTAGGAGGAGGCTGTTTGTAACAGCTGTGCTAATTGTGATCAGTCGTGTTGGTTATTTTATCCCTCTGCCTGGATTTGATAGAAGGTTGATCCCTCAAGATTACCTAAGCTTTGTATCGGGATCTGTTGATGAACTTGGCGATTTTGCAGCAGAGCTTAAAATGTCTTTCTTTCAGCTTGGAATCAGTCCTCAAATCATAGCATCGATCATAATGCAGGTACTATGTCATGTTGTTCCCTCCCTGGTAAAGCTGCGGAAGGAAGGCTTAGATGGTCATGAGAAGATTAAGAGTTATATATGGTGGCTATCTTTTGGCTTTGCAATAGTGGAAGCTATCATACTTGCTTGTTATTCGCTTCCATATTCAATCTATGCGGCTAGCTACAGGGTCAAGCATGTGATGGTGACAAGTATGTTATTGGTCTGTGGAGCGATGACAATGACGTGGATTTGTGATACCATCTCAGAATCTGGATTTGGTCAAGGTTCATCTCTAATTATTTGTGTACAAATATTGACTGGCTACACAGAGACGTTATACAAAATGCTGTCTCAGCTCTCAGGAAGTTCTGTTAGTTGGGGGCCTTACTTATTTGCAGTATTGGGCGTTTTCACTATAGTCACTATGTGGGCAGTTGTGGTGACCGAAGGGTGCAGGAAGATAAAGCTGCAGTACTATGGTTTTAAGCTTGCTTCTGCTGTAAGAGATGACTCACCTATTACCGAAGTGGAGCCCTATATCCCTTTTACCATTAACCCTTCAGGAATGCAGCCTGTTCTCACCACTACTTATCTCTTGGCCTTTCCCAGCATTCTTGCAAGTATTCTTGGTTCACCTTTCTGGGAGCATGTTAAGGAGATATTGAACCCCGAAAATACCATTGGGGCAGGGCCCTGGGTGTACTATTCAGTATATGCATTTTTTGTGTTCTTATTCAATATATTTGACATTGCCAACTTGCCCAAGGAAATTGCTGATTACTTAAATAAGATGGGTGCCAGGATACCAAACATAAAACCTGGGAAGGCTACAATTGAGTACCTCACAAAGATTCAGGCATCGACACGTTTCTGGGGGGGGCTATTGTTAAGTATCTTGGCAACAACATCAAGCATAATCGACCATTATTTACGCAATATCAATGCAGGGTTTGCAATCGGGTTGACATCAGTCCTCATAATAGTGGGTTCTATTATTGAACTTAGAAGATCATATCAGGCATATAATGTAATGCCGAGTTTAAGCAAAGCCTTAAGCCGGTATGGTGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008104 GO:0008150 GO:0009526 GO:0009536 GO:0009657 GO:0009658 GO:0009668 GO:0009987 GO:0010027 GO:0016043 GO:0031967 GO:0031975 GO:0033036 GO:0033365 GO:0034613 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051641 GO:0061024 GO:0070727 GO:0071840 GO:0072598

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SecY

Protein Analysis

628

Amino Acids

69.86

Weight (kDa)

9.11

Isoelectric Point (pI)

45.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SecY	PF00344	259 - 604	2.5e-68	SecY

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008295)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31530
fragaria_vesca	FvH4_2g23670 FvH4_2g23670 FvH4_2g23670 FvH4_2g23670 FvH4_2g23670 FvH4_2g23670
malus_domestica	MD03G1266100.v1.1 MD11G1286500.v1.1
prunus_persica	Prupe.8G241800_v2.0.a1
pyrus_communis	pycom03g21260 pycom11g25400
rosa_chinensis	RchiOBHm_Chr6g0291131
rosa_laevigata	RLG00000012141
rosa_multiflora	Rmu_sc0004642.1_g000022 Rmu_sc0013275.1_g000001
rosa_roxburghii	Rroxscaffold_7G00176350
rosa_rugosa	Rorug06G0217900
rosa_samantha	Rh6AG328200 Rh6BG335700 Rh6CG341800 Rh6DG329100
rosa_wichuraiana	Rw6G028550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	817
AccB1I	GGYRCC	1 cut(s)	1607
AciI	CCGC	5 cut(s)	132, 159, 366, 865, 986
AclWI	GGATC	2 cut(s)	694, 739
AcsI	RAATTY	5 cut(s)	246, 252, 313, 474, 550
AcuI	CTGAAG	1 cut(s)	1356
AdeI	CACNNNGTG	1 cut(s)	1239
AfaI	GTAC	5 cut(s)	831, 1119, 1286, 1514, 1652
AfiI	CCNNNNNNNGG	4 cut(s)	23, 455, 680, 1869
AflII	CTTAAG	1 cut(s)	1864
AflIII	ACRYGT	1 cut(s)	1676
AgeI	ACCGGT	1 cut(s)	540
AgsI	TTSAA	8 cut(s)	251, 440, 550, 601, 978, 1477, 1549, 1811
AjiI	CACGTC	1 cut(s)	1056
AjnI	CCWGG	5 cut(s)	679, 852, 1505, 1610, 1630
AjuI	GAANNNNNNNTTGG	4 cut(s)	1071, 1103, 1476, 1508
Alw26I	GTCTC	4 cut(s)	367, 432, 1136, 1167
AlwI	GGATC	2 cut(s)	694, 739
AlwNI	CAGNNNCTG	1 cut(s)	1082
Ama87I	CYCGRG	1 cut(s)	222
AoxI	GGCC	6 cut(s)	26, 332, 516, 1193, 1410, 1502
ApaI	GGGCCC	1 cut(s)	1506
ApeKI	GCWGC	6 cut(s)	134, 584, 758, 862, 1279, 1381
ApoI	RAATTY	5 cut(s)	246, 252, 313, 474, 550
ArsI	GACNNNNNNTTYG	2 cut(s)	460, 492
AsiGI	ACCGGT	1 cut(s)	540
Asp700I	GAANNNNTTC	1 cut(s)	383
AspLEI	GCGC	1 cut(s)	561
AspS9I	GGNCC	6 cut(s)	4, 26, 333, 1193, 1502, 1503
AsuHPI	GGTGA	5 cut(s)	1027, 1264, 1317, 1384, 1437
AsuII	TTCGAA	2 cut(s)	377, 479
AsuNHI	GCTAGC	1 cut(s)	989
AvaI	CYCGRG	1 cut(s)	222
AvaII	GGWCC	1 cut(s)	4
AxyI	CCTNAGG	1 cut(s)	296
BaeGI	GKGCMC	1 cut(s)	1506
BanI	GGYRCC	1 cut(s)	1607
BanII	GRGCYC	2 cut(s)	1347, 1506
BarI	GAAGNNNNNNTAC	2 cut(s)	933, 965
BbvI	GCAGC	6 cut(s)	121, 571, 770, 849, 1266, 1393
BccI	CCATC	5 cut(s)	204, 875, 1006, 1079, 1597
BceAI	ACGGC	1 cut(s)	85
BcgI	CGANNNNNNTGC	2 cut(s)	805, 839
BciT130I	CCWGG	5 cut(s)	681, 854, 1507, 1612, 1632
BciVI	GTATCC	1 cut(s)	1608
BclI	TGATCA	1 cut(s)	648
BcoDI	GTCTC	4 cut(s)	367, 432, 1136, 1167
BfaI	CTAG	2 cut(s)	309, 990
BfmI	CTRYAG	3 cut(s)	994, 1227, 1280
BfrI	CTTAAG	1 cut(s)	1864
BfuAI	ACCTGC	1 cut(s)	817
BfuI	GTATCC	1 cut(s)	1608
BglI	GCCNNNNNGGC	1 cut(s)	331
BisI	GCNGC	7 cut(s)	135, 585, 759, 863, 987, 1280, 1382
BlsI	GCNGC	7 cut(s)	136, 586, 760, 864, 988, 1281, 1383
BmcAI	AGTACT	1 cut(s)	1286
Bme1390I	CCNGG	5 cut(s)	681, 854, 1507, 1612, 1632
Bme18I	GGWCC	1 cut(s)	4
BmeT110I	CYCGRG	1 cut(s)	222
BmgBI	CACGTC	1 cut(s)	1056
BmgT120I	GGNCC	6 cut(s)	4, 26, 333, 1193, 1502, 1503
BmiI	GGNNCC	4 cut(s)	1194, 1344, 1504, 1609
BmrFI	CCNGG	5 cut(s)	681, 854, 1507, 1612, 1632
BmsI	GCATC	2 cut(s)	821, 1679
BmtI	GCTAGC	1 cut(s)	993
BoxI	GACNNNNGTC	1 cut(s)	1781
BpmI	CTGGAG	1 cut(s)	405
Bpu10I	CCTNAGC	1 cut(s)	716
Bpu14I	TTCGAA	2 cut(s)	377, 479
BpuEI	CTTGAG	1 cut(s)	690
Bsa29I	ATCGAT	1 cut(s)	815
BsaJI	CCNNGG	6 cut(s)	162, 852, 1505, 1506, 1575, 1631
BsaWI	WCCGGW	1 cut(s)	540
Bsc4I	CCNNNNNNNGG	4 cut(s)	23, 455, 680, 1869
Bse118I	RCCGGY	2 cut(s)	540, 1869
Bse1I	ACTGG	2 cut(s)	382, 1135
Bse21I	CCTNAGG	1 cut(s)	296
Bse3DI	GCAATG	1 cut(s)	1560
BseBI	CCWGG	5 cut(s)	681, 854, 1507, 1612, 1632
BseCI	ATCGAT	1 cut(s)	815
BseDI	CCNNGG	6 cut(s)	162, 852, 1505, 1506, 1575, 1631
BseGI	GGATG	2 cut(s)	196, 514
BseLI	CCNNNNNNNGG	4 cut(s)	23, 455, 680, 1869
BseMI	GCAATG	1 cut(s)	1560
BseMII	CTCAG	6 cut(s)	193, 554, 579, 1089, 1178, 1185
BseNI	ACTGG	2 cut(s)	382, 1135
BseRI	GAGGAG	1 cut(s)	631
BseSI	GKGCMC	1 cut(s)	1506
BseXI	GCAGC	6 cut(s)	121, 571, 770, 849, 1266, 1393
BseYI	CCCAGC	2 cut(s)	107, 1418
BsgI	GTGCAG	2 cut(s)	249, 1285
BshFI	GGCC	6 cut(s)	28, 334, 518, 1195, 1412, 1504
BshNI	GGYRCC	1 cut(s)	1607
BshTI	ACCGGT	1 cut(s)	540
BshVI	ATCGAT	1 cut(s)	815
BsiHKCI	CYCGRG	1 cut(s)	222
BsiSI	CCGG	2 cut(s)	541, 1870
BslFI	GGGAC	3 cut(s)	114, 141, 481
BslI	CCNNNNNNNGG	4 cut(s)	23, 455, 680, 1869
BsmAI	GTCTC	4 cut(s)	367, 432, 1136, 1167
BsmBI	CGTCTC	1 cut(s)	1136
BsmFI	GGGAC	3 cut(s)	114, 141, 481
BsmI	GAATGC	2 cut(s)	1383, 1422
BsnI	GGCC	6 cut(s)	28, 334, 518, 1195, 1412, 1504
BsoBI	CYCGRG	1 cut(s)	222
Bsp119I	TTCGAA	2 cut(s)	377, 479
Bsp120I	GGGCCC	1 cut(s)	1502
Bsp1286I	GDGCHC	2 cut(s)	1347, 1506
Bsp1407I	TGTACA	1 cut(s)	1117
Bsp143I	GATC	5 cut(s)	648, 699, 731, 816, 1820
Bsp19I	CCATGG	1 cut(s)	162
BspACI	CCGC	5 cut(s)	132, 159, 366, 865, 986
BspANI	GGCC	6 cut(s)	28, 334, 518, 1195, 1412, 1504
BspCNI	CTCAG	6 cut(s)	192, 555, 580, 1088, 1177, 1184
BspDI	ATCGAT	1 cut(s)	815
BspHI	TCATGA	1 cut(s)	886
BspLI	GGNNCC	4 cut(s)	1194, 1344, 1504, 1609
BspMAI	CTGCAG	1 cut(s)	1284
BspMI	ACCTGC	1 cut(s)	817
BspOI	GCTAGC	1 cut(s)	993
BspPI	GGATC	2 cut(s)	694, 739
BspT104I	TTCGAA	2 cut(s)	377, 479
BspT107I	GGYRCC	1 cut(s)	1607
BspTI	CTTAAG	1 cut(s)	1864
BsrDI	GCAATG	1 cut(s)	1560
BsrFI	RCCGGY	2 cut(s)	540, 1869
BsrGI	TGTACA	1 cut(s)	1117
BsrI	ACTGG	2 cut(s)	382, 1135
BssAI	RCCGGY	2 cut(s)	540, 1869
BssECI	CCNNGG	6 cut(s)	162, 852, 1505, 1506, 1575, 1631
BssMI	GATC	5 cut(s)	648, 699, 731, 816, 1820
BssT1I	CCWWGG	2 cut(s)	162, 1575
Bst2UI	CCWGG	5 cut(s)	681, 854, 1507, 1612, 1632
Bst4CI	ACNGT	1 cut(s)	128
Bst6I	CTCTTC	2 cut(s)	180, 352
BstAFI	CTTAAG	1 cut(s)	1864
BstAPI	GCANNNNNTGC	1 cut(s)	1763
BstAUI	TGTACA	1 cut(s)	1117
BstBI	TTCGAA	2 cut(s)	377, 479
BstC8I	GCNNGC	4 cut(s)	185, 516, 991, 1302
BstDSI	CCRYGG	1 cut(s)	162
BstEII	GGTNACC	1 cut(s)	1252
BstF5I	GGATG	2 cut(s)	196, 514
BstHHI	GCGC	1 cut(s)	561
BstKTI	GATC	5 cut(s)	651, 702, 734, 819, 1823
BstMAI	GTCTC	4 cut(s)	367, 432, 1136, 1167
BstMBI	GATC	5 cut(s)	648, 699, 731, 816, 1820
BstMWI	GCNNNNNNNGC	7 cut(s)	56, 65, 167, 189, 331, 1165, 1763
BstNI	CCWGG	5 cut(s)	681, 854, 1507, 1612, 1632
BstNSI	RCATGY	2 cut(s)	1010, 1463
BstPAI	GACNNNNGTC	1 cut(s)	1781
BstPI	GGTNACC	1 cut(s)	1252
BstSCI	CCNGG	5 cut(s)	679, 852, 1505, 1610, 1630
BstSFI	CTRYAG	3 cut(s)	994, 1227, 1280
BstSLI	GKGCMC	1 cut(s)	1506
BstV1I	GCAGC	6 cut(s)	121, 571, 770, 849, 1266, 1393
BstX2I	RGATCY	1 cut(s)	731
BstYI	RGATCY	1 cut(s)	731
Bsu15I	ATCGAT	1 cut(s)	815
Bsu36I	CCTNAGG	1 cut(s)	296
BsuI	GTATCC	1 cut(s)	1608
BsuRI	GGCC	6 cut(s)	28, 334, 518, 1195, 1412, 1504
BsuTUI	ATCGAT	1 cut(s)	815
BtgI	CCRYGG	1 cut(s)	162
BtgZI	GCGATG	1 cut(s)	1058
BtrI	CACGTC	1 cut(s)	1056
BtsCI	GGATG	2 cut(s)	196, 514
BtsIMutI	CAGTG	1 cut(s)	576
BveI	ACCTGC	1 cut(s)	817
Cac8I	GCNNGC	4 cut(s)	185, 516, 991, 1302
CaiI	CAGNNNCTG	1 cut(s)	1082
CciI	TCATGA	1 cut(s)	886
CfoI	GCGC	1 cut(s)	561
Cfr10I	RCCGGY	2 cut(s)	540, 1869
Cfr13I	GGNCC	6 cut(s)	4, 26, 333, 1193, 1502, 1503
ClaI	ATCGAT	1 cut(s)	815
Csp6I	GTAC	5 cut(s)	830, 1118, 1285, 1513, 1651
CspAI	ACCGGT	1 cut(s)	540
CviAII	CATG	6 cut(s)	163, 319, 839, 887, 1007, 1460
CviQI	GTAC	5 cut(s)	830, 1118, 1285, 1513, 1651
DpnI	GATC	5 cut(s)	650, 701, 733, 818, 1822
DpnII	GATC	5 cut(s)	648, 699, 731, 816, 1820
DraIII	CACNNNGTG	1 cut(s)	1239
Eam1104I	CTCTTC	2 cut(s)	180, 352
EarI	CTCTTC	2 cut(s)	180, 352
Eco130I	CCWWGG	2 cut(s)	162, 1575
Eco24I	GRGCYC	2 cut(s)	1347, 1506
Eco47I	GGWCC	1 cut(s)	4
Eco57I	CTGAAG	1 cut(s)	1356
Eco81I	CCTNAGG	1 cut(s)	296
Eco88I	CYCGRG	1 cut(s)	222
Eco91I	GGTNACC	1 cut(s)	1252
EcoO109I	RGGNCCY	4 cut(s)	333, 1193, 1502, 1503
EcoO65I	GGTNACC	1 cut(s)	1252
EcoRII	CCWGG	5 cut(s)	679, 852, 1505, 1610, 1630
EcoT14I	CCWWGG	2 cut(s)	162, 1575
EcoT22I	ATGCAT	1 cut(s)	1531
EcoT38I	GRGCYC	2 cut(s)	1347, 1506
ErhI	CCWWGG	2 cut(s)	162, 1575
Esp3I	CGTCTC	1 cut(s)	1136
FaeI	CATG	6 cut(s)	166, 322, 842, 890, 1010, 1463
FalI	AAGNNNNNCTT	4 cut(s)	159, 191, 860, 892
FaqI	GGGAC	3 cut(s)	114, 141, 481
FatI	CATG	6 cut(s)	162, 318, 838, 886, 1006, 1459
FauI	CCCGC	2 cut(s)	139, 166
FbaI	TGATCA	1 cut(s)	648
Fnu4HI	GCNGC	7 cut(s)	135, 585, 759, 863, 987, 1280, 1382
FokI	GGATG	2 cut(s)	183, 521
FriOI	GRGCYC	2 cut(s)	1347, 1506
Fsp4HI	GCNGC	7 cut(s)	135, 585, 759, 863, 987, 1280, 1382
FspBI	CTAG	2 cut(s)	309, 990
GlaI	GCGC	1 cut(s)	560
GluI	GCNGC	7 cut(s)	135, 585, 759, 863, 987, 1280, 1382
GsaI	CCCAGC	2 cut(s)	111, 1422
GsuI	CTGGAG	1 cut(s)	405
HaeIII	GGCC	6 cut(s)	28, 334, 518, 1195, 1412, 1504
HapII	CCGG	2 cut(s)	541, 1870
HhaI	GCGC	1 cut(s)	561
Hin1II	CATG	6 cut(s)	166, 322, 842, 890, 1010, 1463
Hin6I	GCGC	1 cut(s)	559
HinP1I	GCGC	1 cut(s)	559
HincII	GTYRAC	1 cut(s)	1776
HindII	GTYRAC	1 cut(s)	1776
HindIII	AAGCTT	2 cut(s)	718, 1298
HinfI	GANTC	7 cut(s)	360, 425, 590, 792, 1079, 1322, 1663
HpaII	CCGG	2 cut(s)	541, 1870
HphI	GGTGA	5 cut(s)	1027, 1264, 1317, 1384, 1437
Hpy166II	GTNNAC	5 cut(s)	352, 1118, 1445, 1513, 1776
Hpy188I	TCNGA	1 cut(s)	1078
Hpy8I	GTNNAC	5 cut(s)	352, 1118, 1445, 1513, 1776
HpyAV	CCTTC	7 cut(s)	17, 687, 862, 866, 1253, 1380, 1630
HpyCH4III	ACNGT	1 cut(s)	128
HpyCH4IV	ACGT	4 cut(s)	530, 1055, 1145, 1678
HpyF10VI	GCNNNNNNNGC	7 cut(s)	56, 65, 167, 189, 331, 1165, 1763
HpySE526I	ACGT	4 cut(s)	530, 1055, 1145, 1678
Hsp92II	CATG	6 cut(s)	166, 322, 842, 890, 1010, 1463
HspAI	GCGC	1 cut(s)	559
Ksp22I	TGATCA	1 cut(s)	648
Kzo9I	GATC	5 cut(s)	648, 699, 731, 816, 1820
LmnI	GCTCC	4 cut(s)	142, 1040, 1342, 1456
Lsp1109I	GCAGC	6 cut(s)	121, 571, 770, 849, 1266, 1393
LweI	GCATC	2 cut(s)	821, 1679
MaeI	CTAG	2 cut(s)	309, 990
MaeII	ACGT	4 cut(s)	530, 1055, 1145, 1678
MaeIII	GTNAC	5 cut(s)	461, 628, 1015, 1231, 1252
MalI	GATC	5 cut(s)	650, 701, 733, 818, 1822
MboI	GATC	5 cut(s)	648, 699, 731, 816, 1820
MboII	GAAGA	6 cut(s)	167, 369, 589, 904, 1282, 1830
MfeI	CAATTG	2 cut(s)	267, 1644
MflI	RGATCY	1 cut(s)	731
MhlI	GDGCHC	2 cut(s)	1347, 1506
MlyI	GAGTC	4 cut(s)	369, 434, 599, 1316
Mph1103I	ATGCAT	1 cut(s)	1531
MroXI	GAANNNNTTC	1 cut(s)	383
MslI	CAYNNNNRTG	1 cut(s)	1793
MspA1I	CMGCKG	2 cut(s)	134, 635
MspCI	CTTAAG	1 cut(s)	1864
MspI	CCGG	2 cut(s)	541, 1870
MspR9I	CCNGG	5 cut(s)	681, 854, 1507, 1612, 1632
MunI	CAATTG	2 cut(s)	267, 1644
Mva1269I	GAATGC	2 cut(s)	1383, 1422
MvaI	CCWGG	5 cut(s)	681, 854, 1507, 1612, 1632
MwoI	GCNNNNNNNGC	7 cut(s)	56, 65, 167, 189, 331, 1165, 1763
NcoI	CCATGG	1 cut(s)	162
NdeII	GATC	5 cut(s)	648, 699, 731, 816, 1820
NheI	GCTAGC	1 cut(s)	989
NlaIII	CATG	6 cut(s)	166, 322, 842, 890, 1010, 1463
NlaIV	GGNNCC	4 cut(s)	1194, 1344, 1504, 1609
NmeAIII	GCCGAG	1 cut(s)	1872
NmuCI	GTSAC	4 cut(s)	461, 1015, 1231, 1252
NsiI	ATGCAT	1 cut(s)	1531
NspI	RCATGY	2 cut(s)	1010, 1463
NspV	TTCGAA	2 cut(s)	377, 479
PaeR7I	CTCGAG	1 cut(s)	222
PagI	TCATGA	1 cut(s)	886
PasI	CCCWGGG	1 cut(s)	1506
PcsI	WCGNNNNNNNCGW	1 cut(s)	476
PctI	GAATGC	2 cut(s)	1383, 1422
PdmI	GAANNNNTTC	1 cut(s)	383
PfeI	GAWTC	3 cut(s)	792, 1079, 1663
PinAI	ACCGGT	1 cut(s)	540
PkrI	GCNGC	7 cut(s)	136, 586, 760, 864, 988, 1281, 1383
PleI	GAGTC	4 cut(s)	368, 433, 598, 1316
PpsI	GAGTC	4 cut(s)	368, 433, 598, 1316
PshAI	GACNNNNGTC	1 cut(s)	1781
Psp6I	CCWGG	5 cut(s)	679, 852, 1505, 1610, 1630
PspEI	GGTNACC	1 cut(s)	1252
PspFI	CCCAGC	2 cut(s)	107, 1418
PspGI	CCWGG	5 cut(s)	679, 852, 1505, 1610, 1630
PspN4I	GGNNCC	4 cut(s)	1194, 1344, 1504, 1609
PspOMI	GGGCCC	1 cut(s)	1502
PspPI	GGNCC	6 cut(s)	4, 26, 333, 1193, 1502, 1503
PsrI	GAACNNNNNNTAC	2 cut(s)	1426, 1458
PstI	CTGCAG	1 cut(s)	1284
PstNI	CAGNNNCTG	1 cut(s)	1082
PsuI	RGATCY	1 cut(s)	731
PvuII	CAGCTG	1 cut(s)	635
RsaI	GTAC	5 cut(s)	831, 1119, 1286, 1514, 1652
RsaNI	GTAC	5 cut(s)	830, 1118, 1285, 1513, 1651
RseI	CAYNNNNRTG	1 cut(s)	1793
SatI	GCNGC	7 cut(s)	135, 585, 759, 863, 987, 1280, 1382
Sau3AI	GATC	5 cut(s)	648, 699, 731, 816, 1820
Sau96I	GGNCC	6 cut(s)	4, 26, 333, 1193, 1502, 1503
ScaI	AGTACT	1 cut(s)	1286
SchI	GAGTC	4 cut(s)	369, 434, 599, 1316
ScrFI	CCNGG	5 cut(s)	681, 854, 1507, 1612, 1632
SduI	GDGCHC	2 cut(s)	1347, 1506
SfaNI	GCATC	2 cut(s)	821, 1679
SfcI	CTRYAG	3 cut(s)	994, 1227, 1280
Sfr274I	CTCGAG	1 cut(s)	222
SfuI	TTCGAA	2 cut(s)	377, 479
SinI	GGWCC	1 cut(s)	4
SlaI	CTCGAG	1 cut(s)	222
SmiMI	CAYNNNNRTG	1 cut(s)	1793
SmlI	CTYRAG	3 cut(s)	222, 705, 1864
SmoI	CTYRAG	3 cut(s)	222, 705, 1864
SsiI	CCGC	5 cut(s)	132, 159, 366, 865, 986
SspI	AATATT	1 cut(s)	1125
SspMI	CTAG	2 cut(s)	309, 990
StyD4I	CCNGG	5 cut(s)	679, 852, 1505, 1610, 1630
StyI	CCWWGG	2 cut(s)	162, 1575
TaaI	ACNGT	1 cut(s)	128
TaiI	ACGT	4 cut(s)	533, 1058, 1148, 1681
TaqI	TCGA	6 cut(s)	223, 377, 479, 815, 1673, 1731
TaqII	GACCGA	1 cut(s)	1271
TatI	WGTACW	3 cut(s)	1117, 1284, 1512
TauI	GCSGC	1 cut(s)	989
TfiI	GAWTC	3 cut(s)	792, 1079, 1663
TscAI	CASTG	1 cut(s)	576
TseFI	GTSAC	4 cut(s)	461, 1015, 1231, 1252
TseI	GCWGC	6 cut(s)	134, 584, 758, 862, 1279, 1381
Tsp45I	GTSAC	4 cut(s)	461, 1015, 1231, 1252
TspDTI	ATGAA	3 cut(s)	307, 756, 1089
TspGWI	ACGGA	3 cut(s)	129, 438, 485
TspRI	CASTG	1 cut(s)	576
Vha464I	CTTAAG	1 cut(s)	1864
VpaK11BI	GGWCC	1 cut(s)	4
XapI	RAATTY	5 cut(s)	246, 252, 313, 474, 550
XceI	RCATGY	2 cut(s)	1010, 1463
XhoI	CTCGAG	1 cut(s)	222
XmnI	GAANNNNTTC	1 cut(s)	383
XspI	CTAG	2 cut(s)	309, 990
ZrmI	AGTACT	1 cut(s)	1286
Zsp2I	ATGCAT	1 cut(s)	1531

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.