Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004642.1

Orthogroup ID

OG0008295

Physical Location & Seq

Genomic Coordinates Forward (+)

88676 .. 95996

Gene Structure 7321 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004642.1_g000022.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2586 bp

atggaagccactctcctcagctctcaacgcttccagccccaactcttcccctctaaatttcgaggttctgatactccaatttgttgcccacgcttagttagaaccaaagccaactttgtttccctcaagaccaatccttcacaattatgcagcacaaattcaattttgccaaacaggtctttattctccagagtaagcaccagagtgtctgctaagttttcgaaccaattccgaaatgaatataccgatgttgaggccacagctgcagaatctctaaatcttgaagttgctccgccgaggccgaatggcgggagaggtgttgttacgcaggatgagattgccgactccggtggtgcggaggcgaaacctgtaatgtttaggaacaggtttctggattttgtgaggataagttcagtgattaataatgctgctgagtcgttcttcaagagtgagattaggaggaggttgtttgtgacggcagtgctgattgtgattagtcgtgttggttatttcattcctctgcctgggtttgatagaaggttgatacctcaggattatctcagctttgtctcgggatcagttgatgagctcggcgattttacagcagagcttaaaatgtccttgttccagcttggaatcagtcctcaaattatagcatcgattatcatgcaggttctctgttatgtcgtcccctccctagtaaagctgcggaaagaaggcttagatggtcaagagaagattaagagttatatatggtggatgtctcttggctttgcaattgtggaggctgtgatacttgcttgttattcacttccctattcaatctatgtagctagccacagggtcaagcatgtgatgctgacaagtatgttattggtctgtggtgcaatgacaatgacgtggatatgtgataccattacagaatctggattcggccaaggttcatctttaataatatgtgtgcaaatattgattggctacacagagacgttatacaaaatgctgacccagctttcaggaagttctgttagttggtggccatacttatttggagtattgggcgttttcactatagtcactatgtgggcagttgtggtaactgaaggatgtaggaagataaagcttcagtactacggttttaagcttgcttctgctgcaagggatgactcacctattactgaagtggagccctatataccttttactattaatccagcaggaatgcagcctgttctcacaactacttatctcttggcatttcccagcattcttgcaagtcttcttggttcgactttctgggagcatgttaaggagattttgaaccctgatacttctattggtgcagcgccttgggtgtactacacaatatatgcgttttttgtctttttattcaatatatttgacatagccaacttgcccaaggaaattgctgactacttaaataagatgggtgcaaggataccaaatataaaacctggaaaggctacgattgaatatctcacaaagattcaggcatcgacacgtttttggggtggtgtcttgttaagcatcttagcaacaacatcaagcatactagatcattatttacgtaacatcaacgcaggattttcaatcgggttgacatcagtcttaataatagtgggttcgattattgaacttagaagatcatatcaagcttataatgtgatgccaagtttaagtaaagccttaagacgtgctggaattgaaacacctgcagcagaaatggttcttacattacgatctggtttaatggaagatagagtcatcatagagtcatcggagatggagttcacggccaactcactggacggctccgtcatcttccacgccattaacgaaatctcaagtttcctactcttcatgcaccagcaaatccccgcagtgttgcaggacatcaccgcggaattcgattcccgctgcgacgagtacaaggccttggaatcggctctgagagacgaccaggtgaagccggcgctgcggagaaagcacgccggcgaaatgagggaagccaagcgagggattcgaaggttccagaagctgatgcacggcgtttcgaatttccaaacggcgctgaagacggtcatcagcggaactcctcggttccgaacagcgcttctgattctcggagggaatccaatgcgacctcaacacgtgtacgaattgagcttctccggaaatgtcagtggcgaagaattggattttgcgaaaagcagagcggcggaagtgctttgtagaaaagcgattcgggggttggtctctgagaatgttgggtctgtttcgtatccgggtccttggaagctgttcctgttggttaaagctccctcttctttccatcagcctctgcattttcttcccaagcgagattttaaatacagcaacaagattgtgcctatgaggctaagcttcaaatgcaaaaaccagaaccagaacattgatcagttttcgcaaaccggcagctctgatgggttggttcagtctgctccggatggtgatgattttatatggtttcaatgtcgacatgtaatcaagggaatagcatttaacacagtacctgaaggagaatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008104 GO:0008150 GO:0009526 GO:0009536 GO:0009657 GO:0009658 GO:0009668 GO:0009987 GO:0010027 GO:0016043 GO:0031967 GO:0031975 GO:0033036 GO:0033365 GO:0034613 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051641 GO:0061024 GO:0070727 GO:0071840 GO:0072598

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SecY

Protein Analysis

861

Amino Acids

96.12

Weight (kDa)

9.02

Isoelectric Point (pI)

41.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008295)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31530
fragaria_vesca	FvH4_2g23670 FvH4_2g23670 FvH4_2g23670 FvH4_2g23670 FvH4_2g23670 FvH4_2g23670
malus_domestica	MD03G1266100.v1.1 MD11G1286500.v1.1
prunus_persica	Prupe.8G241800_v2.0.a1
pyrus_communis	pycom03g21260 pycom11g25400
rosa_chinensis	RchiOBHm_Chr6g0291131
rosa_laevigata	RLG00000012141
rosa_multiflora	Rmu_sc0004642.1_g000022 Rmu_sc0013275.1_g000001
rosa_roxburghii	Rroxscaffold_7G00176350
rosa_rugosa	Rorug06G0217900
rosa_samantha	Rh6AG328200 Rh6BG335700 Rh6CG341800 Rh6DG329100
rosa_wichuraiana	Rw6G028550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1680
AarI	CACCTGC	1 cut(s)	1741
AasI	GACNNNNNNGTC	1 cut(s)	1835
Acc36I	ACCTGC	2 cut(s)	661, 1741
AccBSI	CCGCTC	1 cut(s)	2237
AccI	GTMKAC	1 cut(s)	2536
AccII	CGCG	1 cut(s)	1922
AccIII	TCCGGA	2 cut(s)	2192, 2503
AclWI	GGATC	1 cut(s)	583
AcoI	YGGCCR	3 cut(s)	934, 1037, 1815
AcsI	RAATTY	4 cut(s)	56, 157, 1925, 2077
AcuI	CTGAAG	4 cut(s)	1109, 1122, 1200, 2114
AcvI	CACGTG	1 cut(s)	2173
AdeI	CACNNNGTG	1 cut(s)	1083
AfaI	GTAC	5 cut(s)	1130, 1358, 1949, 2177, 2571
AfeI	AGCGCT	1 cut(s)	2133
AfiI	CCNNNNNNNGG	3 cut(s)	308, 524, 2037
AflII	CTTAAG	1 cut(s)	1708
AflIII	ACRYGT	4 cut(s)	1520, 2170, 2172, 2539
AjiI	CACGTC	2 cut(s)	900, 1715
AjnI	CCWGG	3 cut(s)	523, 1474, 1980
AleI	CACNNNNGTG	1 cut(s)	203
AloI	GAACNNNNNNTCC	2 cut(s)	1793, 1825
Alw21I	GWGCWC	1 cut(s)	591
Alw26I	GTCTC	5 cut(s)	574, 768, 980, 1968, 2281
AlwI	GGATC	1 cut(s)	583
AlwNI	CAGNNNCTG	4 cut(s)	926, 2059, 2362, 2573
Ama87I	CYCGRG	1 cut(s)	571
Aor13HI	TCCGGA	2 cut(s)	2192, 2503
Aor51HI	AGCGCT	1 cut(s)	2133
AoxI	GGCC	6 cut(s)	255, 299, 934, 1037, 1815, 1953
ApoI	RAATTY	4 cut(s)	56, 157, 1925, 2077
AseI	ATTAAT	2 cut(s)	420, 1209
Asp700I	GAANNNNTTC	3 cut(s)	227, 1746, 2321
AspLEI	GCGC	4 cut(s)	1348, 1996, 2092, 2134
AspS9I	GGNCC	1 cut(s)	2309
AsuC2I	CCSGG	1 cut(s)	2307
AsuHPI	GGTGA	4 cut(s)	1161, 1909, 1996, 2522
AsuII	TTCGAA	3 cut(s)	221, 2044, 2075
AsuNHI	GCTAGC	1 cut(s)	833
AvaI	CYCGRG	1 cut(s)	571
AvaII	GGWCC	1 cut(s)	2309
AxyI	CCTNAGG	1 cut(s)	549
BalI	TGGCCA	1 cut(s)	1039
BanII	GRGCYC	2 cut(s)	591, 1191
BbrPI	CACGTG	1 cut(s)	2173
BbsI	GAAGAC	2 cut(s)	1271, 2102
Bbv12I	GWGCWC	1 cut(s)	591
BbvCI	CCTCAGC	1 cut(s)	17
BccI	CCATC	6 cut(s)	719, 1441, 1798, 2361, 2477, 2501
BceAI	ACGGC	5 cut(s)	492, 1830, 1846, 2083, 2103
BcgI	CGANNNNNNTGC	2 cut(s)	649, 683
BciT130I	CCWGG	3 cut(s)	525, 1476, 1982
BciVI	GTATCC	2 cut(s)	1452, 2313
BclI	TGATCA	1 cut(s)	2455
BcnI	CCSGG	1 cut(s)	2307
BcoDI	GTCTC	5 cut(s)	574, 768, 980, 1968, 2281
BfaI	CTAG	3 cut(s)	698, 834, 1574
BfmI	CTRYAG	3 cut(s)	264, 1071, 1734
BfoI	RGCGCY	4 cut(s)	1349, 1997, 2093, 2135
BfrI	CTTAAG	1 cut(s)	1708
BfuAI	ACCTGC	2 cut(s)	661, 1741
BfuI	GTATCC	2 cut(s)	1452, 2313
BglI	GCCNNNNNGGC	1 cut(s)	2416
BlpI	GCTNAGC	1 cut(s)	2420
BmcAI	AGTACT	1 cut(s)	1130
Bme1390I	CCNGG	4 cut(s)	525, 1476, 1982, 2307
Bme18I	GGWCC	1 cut(s)	2309
BmeT110I	CYCGRG	1 cut(s)	571
BmgBI	CACGTC	2 cut(s)	900, 1715
BmgT120I	GGNCC	1 cut(s)	2309
BmiI	GGNNCC	5 cut(s)	1188, 1834, 2051, 2123, 2310
BmrFI	CCNGG	4 cut(s)	525, 1476, 1982, 2307
BmsI	GCATC	6 cut(s)	665, 846, 1523, 1557, 1677, 2052
BmtI	GCTAGC	1 cut(s)	837
BoxI	GACNNNNGTC	1 cut(s)	1625
BpiI	GAAGAC	2 cut(s)	1271, 2102
BpmI	CTGGAG	1 cut(s)	172
Bpu10I	CCTNAGC	1 cut(s)	17
Bpu1102I	GCTNAGC	1 cut(s)	2420
Bpu14I	TTCGAA	3 cut(s)	221, 2044, 2075
BpuEI	CTTGAG	2 cut(s)	110, 1849
BpuMI	CCSGG	1 cut(s)	2307
Bsa29I	ATCGAT	1 cut(s)	659
BsaAI	YACGTR	2 cut(s)	1589, 2173
BsaI	GGTCTC	1 cut(s)	2281
BsaJI	CCNNGG	9 cut(s)	296, 524, 937, 1349, 1419, 1920, 1956, 2117, 2312
BsaWI	WCCGGW	3 cut(s)	347, 2192, 2503
BsaXI	ACNNNNNCTCC	2 cut(s)	1793, 1823
Bsc4I	CCNNNNNNNGG	3 cut(s)	308, 524, 2037
Bse118I	RCCGGY	3 cut(s)	1990, 2012, 2471
Bse1I	ACTGG	1 cut(s)	1830
Bse21I	CCTNAGG	1 cut(s)	549
Bse3DI	GCAATG	1 cut(s)	894
BseAI	TCCGGA	2 cut(s)	2192, 2503
BseBI	CCWGG	3 cut(s)	525, 1476, 1982
BseCI	ATCGAT	1 cut(s)	659
BseDI	CCNNGG	9 cut(s)	296, 524, 937, 1349, 1419, 1920, 1956, 2117, 2312
BseGI	GGATG	5 cut(s)	337, 765, 1112, 1168, 2512
BseLI	CCNNNNNNNGG	3 cut(s)	308, 524, 2037
BseMI	GCAATG	1 cut(s)	894
BseMII	CTCAG	6 cut(s)	31, 423, 563, 574, 1961, 2271
BseNI	ACTGG	1 cut(s)	1830
BseRI	GAGGAG	3 cut(s)	5, 475, 2106
BseYI	CCCAGC	2 cut(s)	1008, 1262
BsgI	GTGCAG	1 cut(s)	1362
Bsh1236I	CGCG	1 cut(s)	1922
BshFI	GGCC	6 cut(s)	257, 301, 936, 1039, 1817, 1955
BshVI	ATCGAT	1 cut(s)	659
BsiHKAI	GWGCWC	1 cut(s)	591
BsiHKCI	CYCGRG	1 cut(s)	571
BsiSI	CCGG	7 cut(s)	348, 1991, 2013, 2193, 2306, 2472, 2504
BslFI	GGGAC	1 cut(s)	674
BslI	CCNNNNNNNGG	3 cut(s)	308, 524, 2037
BsmAI	GTCTC	5 cut(s)	574, 768, 980, 1968, 2281
BsmBI	CGTCTC	2 cut(s)	980, 1968
BsmFI	GGGAC	1 cut(s)	674
BsmI	GAATGC	2 cut(s)	1227, 1266
BsnI	GGCC	6 cut(s)	257, 301, 936, 1039, 1817, 1955
Bso31I	GGTCTC	1 cut(s)	2281
BsoBI	CYCGRG	1 cut(s)	571
Bsp119I	TTCGAA	3 cut(s)	221, 2044, 2075
Bsp1286I	GDGCHC	2 cut(s)	591, 1191
Bsp13I	TCCGGA	2 cut(s)	2192, 2503
Bsp143I	GATC	5 cut(s)	575, 1576, 1664, 1760, 2455
Bsp1720I	GCTNAGC	1 cut(s)	2420
BspANI	GGCC	6 cut(s)	257, 301, 936, 1039, 1817, 1955
BspCNI	CTCAG	6 cut(s)	30, 424, 562, 573, 1962, 2272
BspDI	ATCGAT	1 cut(s)	659
BspEI	TCCGGA	2 cut(s)	2192, 2503
BspFNI	CGCG	1 cut(s)	1922
BspLI	GGNNCC	5 cut(s)	1188, 1834, 2051, 2123, 2310
BspMAI	CTGCAG	2 cut(s)	268, 1738
BspMI	ACCTGC	2 cut(s)	661, 1741
BspOI	GCTAGC	1 cut(s)	837
BspPI	GGATC	1 cut(s)	583
BspT104I	TTCGAA	3 cut(s)	221, 2044, 2075
BspTI	CTTAAG	1 cut(s)	1708
BspTNI	GGTCTC	1 cut(s)	2281
BsrBI	CCGCTC	1 cut(s)	2237
BsrDI	GCAATG	1 cut(s)	894
BsrFI	RCCGGY	3 cut(s)	1990, 2012, 2471
BsrI	ACTGG	1 cut(s)	1830
BssAI	RCCGGY	3 cut(s)	1990, 2012, 2471
BssECI	CCNNGG	9 cut(s)	296, 524, 937, 1349, 1419, 1920, 1956, 2117, 2312
BssMI	GATC	5 cut(s)	575, 1576, 1664, 1760, 2455
BssT1I	CCWWGG	5 cut(s)	937, 1349, 1419, 1956, 2312
Bst2UI	CCWGG	3 cut(s)	525, 1476, 1982
Bst4CI	ACNGT	3 cut(s)	1136, 2101, 2569
Bst6I	CTCTTC	3 cut(s)	50, 1883, 2350
BstAFI	CTTAAG	1 cut(s)	1708
BstAPI	GCANNNNNTGC	1 cut(s)	856
BstBAI	YACGTR	2 cut(s)	1589, 2173
BstBI	TTCGAA	3 cut(s)	221, 2044, 2075
BstC8I	GCNNGC	5 cut(s)	835, 1146, 1992, 2010, 2014
BstDSI	CCRYGG	1 cut(s)	1920
BstF5I	GGATG	5 cut(s)	337, 765, 1112, 1168, 2512
BstFNI	CGCG	1 cut(s)	1922
BstH2I	RGCGCY	4 cut(s)	1349, 1997, 2093, 2135
BstHHI	GCGC	4 cut(s)	1348, 1996, 2092, 2134
BstKTI	GATC	5 cut(s)	578, 1579, 1667, 1763, 2458
BstMAI	GTCTC	5 cut(s)	574, 768, 980, 1968, 2281
BstMBI	GATC	5 cut(s)	575, 1576, 1664, 1760, 2455
BstMWI	GCNNNNNNNGC	9 cut(s)	27, 263, 856, 1009, 1154, 1996, 2005, 2416, 2430
BstNI	CCWGG	3 cut(s)	525, 1476, 1982
BstNSI	RCATGY	3 cut(s)	854, 1307, 2543
BstPAI	GACNNNNGTC	1 cut(s)	1625
BstSCI	CCNGG	4 cut(s)	523, 1474, 1980, 2305
BstSFI	CTRYAG	3 cut(s)	264, 1071, 1734
BstSNI	TACGTA	1 cut(s)	1589
BstUI	CGCG	1 cut(s)	1922
BstV2I	GAAGAC	2 cut(s)	1271, 2102
BstXI	CCANNNNNNTGG	1 cut(s)	1825
Bsu15I	ATCGAT	1 cut(s)	659
Bsu36I	CCTNAGG	1 cut(s)	549
BsuI	GTATCC	2 cut(s)	1452, 2313
BsuRI	GGCC	6 cut(s)	257, 301, 936, 1039, 1817, 1955
BsuTUI	ATCGAT	1 cut(s)	659
BtgI	CCRYGG	1 cut(s)	1920
BtrI	CACGTC	2 cut(s)	900, 1715
BtsCI	GGATG	5 cut(s)	337, 765, 1112, 1168, 2512
BtsI	GCAGTG	2 cut(s)	486, 1908
BtsIMutI	CAGTG	5 cut(s)	420, 486, 1823, 1908, 2209
BveI	ACCTGC	2 cut(s)	661, 1741
Cac8I	GCNNGC	5 cut(s)	835, 1146, 1992, 2010, 2014
CaiI	CAGNNNCTG	4 cut(s)	926, 2059, 2362, 2573
CfoI	GCGC	4 cut(s)	1348, 1996, 2092, 2134
Cfr10I	RCCGGY	3 cut(s)	1990, 2012, 2471
Cfr13I	GGNCC	1 cut(s)	2309
Cfr42I	CCGCGG	1 cut(s)	1923
ClaI	ATCGAT	1 cut(s)	659
CsiI	ACCWGGT	1 cut(s)	1980
Csp6I	GTAC	5 cut(s)	1129, 1357, 1948, 2176, 2570
CviAII	CATG	5 cut(s)	667, 851, 1304, 1882, 2540
CviQI	GTAC	5 cut(s)	1129, 1357, 1948, 2176, 2570
DpnI	GATC	5 cut(s)	577, 1578, 1666, 1762, 2457
DpnII	GATC	5 cut(s)	575, 1576, 1664, 1760, 2455
DraI	TTTAAA	1 cut(s)	2389
DraIII	CACNNNGTG	1 cut(s)	1083
DrdI	GACNNNNNNGTC	1 cut(s)	1835
DseDI	GACNNNNNNGTC	1 cut(s)	1835
EaeI	YGGCCR	3 cut(s)	934, 1037, 1815
Eam1104I	CTCTTC	3 cut(s)	50, 1883, 2350
EarI	CTCTTC	3 cut(s)	50, 1883, 2350
EciI	GGCGGA	2 cut(s)	282, 2255
Ecl136II	GAGCTC	1 cut(s)	589
Eco105I	TACGTA	1 cut(s)	1589
Eco130I	CCWWGG	5 cut(s)	937, 1349, 1419, 1956, 2312
Eco147I	AGGCCT	1 cut(s)	1955
Eco24I	GRGCYC	2 cut(s)	591, 1191
Eco31I	GGTCTC	1 cut(s)	2281
Eco47I	GGWCC	1 cut(s)	2309
Eco47III	AGCGCT	1 cut(s)	2133
Eco53kI	GAGCTC	1 cut(s)	589
Eco57I	CTGAAG	4 cut(s)	1109, 1122, 1200, 2114
Eco72I	CACGTG	1 cut(s)	2173
Eco81I	CCTNAGG	1 cut(s)	549
Eco88I	CYCGRG	1 cut(s)	571
EcoICRI	GAGCTC	1 cut(s)	589
EcoO109I	RGGNCCY	1 cut(s)	2309
EcoRI	GAATTC	1 cut(s)	1925
EcoRII	CCWGG	3 cut(s)	523, 1474, 1980
EcoT14I	CCWWGG	5 cut(s)	937, 1349, 1419, 1956, 2312
EcoT38I	GRGCYC	2 cut(s)	591, 1191
ErhI	CCWWGG	5 cut(s)	937, 1349, 1419, 1956, 2312
Esp3I	CGTCTC	2 cut(s)	980, 1968
FaeI	CATG	5 cut(s)	670, 854, 1307, 1885, 2543
FaqI	GGGAC	1 cut(s)	674
FatI	CATG	5 cut(s)	666, 850, 1303, 1881, 2539
FauI	CCCGC	3 cut(s)	302, 1906, 1943
FbaI	TGATCA	1 cut(s)	2455
FblI	GTMKAC	1 cut(s)	2536
FokI	GGATG	5 cut(s)	344, 772, 1119, 1175, 2519
FriOI	GRGCYC	2 cut(s)	591, 1191
FspBI	CTAG	3 cut(s)	698, 834, 1574
GlaI	GCGC	4 cut(s)	1347, 1995, 2091, 2133
GsaI	CCCAGC	2 cut(s)	1012, 1266
GsuI	CTGGAG	1 cut(s)	172
HaeII	RGCGCY	4 cut(s)	1349, 1997, 2093, 2135
HaeIII	GGCC	6 cut(s)	257, 301, 936, 1039, 1817, 1955
HapII	CCGG	7 cut(s)	348, 1991, 2013, 2193, 2306, 2472, 2504
HhaI	GCGC	4 cut(s)	1348, 1996, 2092, 2134
Hin1II	CATG	5 cut(s)	670, 854, 1307, 1885, 2543
Hin6I	GCGC	4 cut(s)	1346, 1994, 2090, 2132
HinP1I	GCGC	4 cut(s)	1346, 1994, 2090, 2132
HincII	GTYRAC	2 cut(s)	1620, 2537
HindII	GTYRAC	2 cut(s)	1620, 2537
HindIII	AAGCTT	4 cut(s)	1121, 1142, 1674, 2422
HpaII	CCGG	7 cut(s)	348, 1991, 2013, 2193, 2306, 2472, 2504
HphI	GGTGA	4 cut(s)	1161, 1909, 1996, 2522
Hpy166II	GTNNAC	5 cut(s)	1357, 1620, 1812, 2176, 2537
Hpy188I	TCNGA	9 cut(s)	70, 233, 1801, 1971, 2126, 2139, 2147, 2281, 2482
Hpy8I	GTNNAC	5 cut(s)	1357, 1620, 1812, 2176, 2537
Hpy99I	CGWCG	1 cut(s)	1946
HpyAV	CCTTC	6 cut(s)	147, 531, 710, 1097, 2040, 2570
HpyCH4III	ACNGT	3 cut(s)	1136, 2101, 2569
HpyCH4IV	ACGT	6 cut(s)	899, 989, 1522, 1588, 1714, 2172
HpyF10VI	GCNNNNNNNGC	9 cut(s)	27, 263, 856, 1009, 1154, 1996, 2005, 2416, 2430
HpySE526I	ACGT	6 cut(s)	899, 989, 1522, 1588, 1714, 2172
Hsp92II	CATG	5 cut(s)	670, 854, 1307, 1885, 2543
HspAI	GCGC	4 cut(s)	1346, 1994, 2090, 2132
Kpn2I	TCCGGA	2 cut(s)	2192, 2503
KroI	GCCGGC	2 cut(s)	1990, 2012
KroNI	GCCGGC	2 cut(s)	1992, 2014
Ksp22I	TGATCA	1 cut(s)	2455
KspI	CCGCGG	1 cut(s)	1923
Kzo9I	GATC	5 cut(s)	575, 1576, 1664, 1760, 2455
LmnI	GCTCC	6 cut(s)	295, 1186, 1300, 1838, 2344, 2506
LweI	GCATC	6 cut(s)	665, 846, 1523, 1557, 1677, 2052
MabI	ACCWGGT	1 cut(s)	1980
MaeI	CTAG	3 cut(s)	698, 834, 1574
MaeII	ACGT	6 cut(s)	899, 989, 1522, 1588, 1714, 2172
MaeIII	GTNAC	5 cut(s)	322, 472, 1075, 1096, 1589
MalI	GATC	5 cut(s)	577, 1578, 1666, 1762, 2457
MbiI	CCGCTC	1 cut(s)	2237
MboI	GATC	5 cut(s)	575, 1576, 1664, 1760, 2455
MfeI	CAATTG	1 cut(s)	777
MhlI	GDGCHC	2 cut(s)	591, 1191
MlsI	TGGCCA	1 cut(s)	1039
MluNI	TGGCCA	1 cut(s)	1039
MlyI	GAGTC	5 cut(s)	338, 443, 1160, 1791, 1802
Mox20I	TGGCCA	1 cut(s)	1039
MreI	CGCCGGCG	1 cut(s)	2012
MroI	TCCGGA	2 cut(s)	2192, 2503
MroNI	GCCGGC	2 cut(s)	1990, 2012
MroXI	GAANNNNTTC	3 cut(s)	227, 1746, 2321
MscI	TGGCCA	1 cut(s)	1039
MslI	CAYNNNNRTG	2 cut(s)	145, 203
Msp20I	TGGCCA	1 cut(s)	1039
MspA1I	CMGCKG	4 cut(s)	263, 1922, 1938, 2109
MspCI	CTTAAG	1 cut(s)	1708
MspI	CCGG	7 cut(s)	348, 1991, 2013, 2193, 2306, 2472, 2504
MspR9I	CCNGG	4 cut(s)	525, 1476, 1982, 2307
MunI	CAATTG	1 cut(s)	777
Mva1269I	GAATGC	2 cut(s)	1227, 1266
MvaI	CCWGG	3 cut(s)	525, 1476, 1982
MvnI	CGCG	1 cut(s)	1922
MwoI	GCNNNNNNNGC	9 cut(s)	27, 263, 856, 1009, 1154, 1996, 2005, 2416, 2430
NaeI	GCCGGC	2 cut(s)	1992, 2014
NciI	CCSGG	1 cut(s)	2307
NdeII	GATC	5 cut(s)	575, 1576, 1664, 1760, 2455
NgoMIV	GCCGGC	2 cut(s)	1990, 2012
NheI	GCTAGC	1 cut(s)	833
NlaIII	CATG	5 cut(s)	670, 854, 1307, 1885, 2543
NlaIV	GGNNCC	5 cut(s)	1188, 1834, 2051, 2123, 2310
NmeAIII	GCCGAG	2 cut(s)	321, 570
NmuCI	GTSAC	2 cut(s)	472, 1075
NspI	RCATGY	3 cut(s)	854, 1307, 2543
NspV	TTCGAA	3 cut(s)	221, 2044, 2075
OliI	CACNNNNGTG	1 cut(s)	203
PaqCI	CACCTGC	1 cut(s)	1741
PceI	AGGCCT	1 cut(s)	1955
PciI	ACATGT	1 cut(s)	2539
PcsI	WCGNNNNNNNCGW	1 cut(s)	1854
PctI	GAATGC	2 cut(s)	1227, 1266
PdiI	GCCGGC	2 cut(s)	1992, 2014
PdmI	GAANNNNTTC	3 cut(s)	227, 1746, 2321
PleI	GAGTC	5 cut(s)	338, 442, 1160, 1790, 1801
PmaCI	CACGTG	1 cut(s)	2173
PmlI	CACGTG	1 cut(s)	2173
PpsI	GAGTC	5 cut(s)	338, 442, 1160, 1790, 1801
Ppu21I	YACGTR	2 cut(s)	1589, 2173
PpuMI	RGGWCCY	1 cut(s)	2309
PscI	ACATGT	1 cut(s)	2539
PshAI	GACNNNNGTC	1 cut(s)	1625
PshBI	ATTAAT	2 cut(s)	420, 1209
PsiI	TTATAA	1 cut(s)	1680
Psp124BI	GAGCTC	1 cut(s)	591
Psp5II	RGGWCCY	1 cut(s)	2309
Psp6I	CCWGG	3 cut(s)	523, 1474, 1980
PspCI	CACGTG	1 cut(s)	2173
PspFI	CCCAGC	2 cut(s)	1008, 1262
PspGI	CCWGG	3 cut(s)	523, 1474, 1980
PspN4I	GGNNCC	5 cut(s)	1188, 1834, 2051, 2123, 2310
PspPI	GGNCC	1 cut(s)	2309
PspPPI	RGGWCCY	1 cut(s)	2309
PstI	CTGCAG	2 cut(s)	268, 1738
PstNI	CAGNNNCTG	4 cut(s)	926, 2059, 2362, 2573
PvuII	CAGCTG	1 cut(s)	263
RsaI	GTAC	5 cut(s)	1130, 1358, 1949, 2177, 2571
RsaNI	GTAC	5 cut(s)	1129, 1357, 1948, 2176, 2570
RseI	CAYNNNNRTG	2 cut(s)	145, 203
SacI	GAGCTC	1 cut(s)	591
SacII	CCGCGG	1 cut(s)	1923
SalI	GTCGAC	1 cut(s)	2535
Sau3AI	GATC	5 cut(s)	575, 1576, 1664, 1760, 2455
Sau96I	GGNCC	1 cut(s)	2309
ScaI	AGTACT	1 cut(s)	1130
SchI	GAGTC	5 cut(s)	338, 443, 1160, 1791, 1802
ScrFI	CCNGG	4 cut(s)	525, 1476, 1982, 2307
SduI	GDGCHC	2 cut(s)	591, 1191
SexAI	ACCWGGT	1 cut(s)	1980
SfaNI	GCATC	6 cut(s)	665, 846, 1523, 1557, 1677, 2052
SfcI	CTRYAG	3 cut(s)	264, 1071, 1734
Sfr303I	CCGCGG	1 cut(s)	1923
SfuI	TTCGAA	3 cut(s)	221, 2044, 2075
SgrAI	CRCCGGYG	1 cut(s)	2012
SgrBI	CCGCGG	1 cut(s)	1923
SinI	GGWCC	1 cut(s)	2309
SmiMI	CAYNNNNRTG	2 cut(s)	145, 203
SmlI	CTYRAG	3 cut(s)	125, 1708, 1864
SmoI	CTYRAG	3 cut(s)	125, 1708, 1864
SnaBI	TACGTA	1 cut(s)	1589
SseBI	AGGCCT	1 cut(s)	1955
SspI	AATATT	1 cut(s)	969
SspMI	CTAG	3 cut(s)	698, 834, 1574
SstI	GAGCTC	1 cut(s)	591
StuI	AGGCCT	1 cut(s)	1955
StyD4I	CCNGG	4 cut(s)	523, 1474, 1980, 2305
StyI	CCWWGG	5 cut(s)	937, 1349, 1419, 1956, 2312
TaaI	ACNGT	3 cut(s)	1136, 2101, 2569
TaiI	ACGT	6 cut(s)	902, 992, 1525, 1591, 1717, 2175
TatI	WGTACW	3 cut(s)	1128, 1356, 1947
TauI	GCSGC	1 cut(s)	2240
TscAI	CASTG	5 cut(s)	420, 486, 1830, 1908, 2209
TseFI	GTSAC	2 cut(s)	472, 1075
Tsp45I	GTSAC	2 cut(s)	472, 1075
TspDTI	ATGAA	4 cut(s)	252, 502, 933, 1870
TspGWI	ACGGA	1 cut(s)	1825
TspRI	CASTG	5 cut(s)	420, 486, 1830, 1908, 2209
Vha464I	CTTAAG	1 cut(s)	1708
VpaK11BI	GGWCC	1 cut(s)	2309
VspI	ATTAAT	2 cut(s)	420, 1209
XapI	RAATTY	4 cut(s)	56, 157, 1925, 2077
XceI	RCATGY	3 cut(s)	854, 1307, 2543
XmiI	GTMKAC	1 cut(s)	2536
XmnI	GAANNNNTTC	3 cut(s)	227, 1746, 2321
XspI	CTAG	3 cut(s)	698, 834, 1574
ZrmI	AGTACT	1 cut(s)	1130

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.