Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0005540

Physical Location & Seq

Genomic Coordinates Reverse (-)

11130293 .. 11135394

Gene Structure 5102 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1089400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGACGACTCTGTTATCTACAGCAGCTCTTCCTTCAATAACAAAGCTCAGCCTGAAGCTTCTCAATCTCAACAATGGCGGCAACCTCCATCCAAAACCTTCTCACCTTTCAGCAGGATTCAGTTTAGATAAAAGCAACAAATTTTCATTGATTAGTTGTGCTGTAAAGAAGCAAGAGAGCACTGAAACGACCCAGAAAGTAAATGGGAAGATTACACCAAGGATAGGTGGTGGAATTGGGAGCCCATTTTTGAGTGAGGGAAGGGATGAGGATGAGAGGAATGGACCGTTTTGCCCTGGGTGTGGGGTGTTTATGCAAGATAAGGACCCAAATGTTCCTGGGTTTTATCAGAAAAGAAAGATTAATGTGTCAGAATTGTCAGATGGTGAGGAGGGTGTTGAGGGTGAATTTGAAGACTTCGAGGTCGAAGAAGAGGAGGAGGAGGAGTTTGTGGATGAAATCGAGGGAAAGTTTGTAGAAAGTGGTGAAGAAGTTAGTGAATTGGAAATGGGGGATGAGTTTGAGTGGGATTCCGATGAATTCGAAGCCAAGTTGTTGGGGGAGGAAGAAAATGATTTGGATTTGGATGGTTTTACTCCGGCGGGGGTTGGGTACGGTAACATCAAAGCGGAAACTATAGAGAAGATGAAGAAGAAGGTGCCAAAATCGGAAAAGAGGAGAATGGCTAGAGAGGCTCAGAAAGAGAAAGAAGAGGTTACAGTGTGTGCCCGATGTCATTCATTAAGAAATTATGGGCAGGTGAAGAACCAAGCAGCTGAAAACTTAATGCCTGATTTTGATTTTGATAGGTTGATCGCAACCCGGCTGATTAAACCTGCTGCGAGGGCCAATCCTGTTGTGGTTATGGTTGTTGATTGTGTTGATTTTGATGGATCATTCCCTAAGCGGGCAGCAAAGTCATTGTTTGCAGCATTAAAGGGAACTGAAAATGATCCTAATCTTAGGAAAAGACTGCCAAAGCTTGTTCTAGTGGCCACAAAGGTTGATCTCCTCCCATCACAAGTTTCTCCTGCTAGATTGGATAGATGGGTCCGCCATCGTGCTAAGGCTGGAGGAGGACCTAAACTAAGTGGGGTGTATATGGTTAGTTCTCATAAGGATTTGAATGTCAGGAATCTGTTATCCTTCCTCAAAGAATCGGCTGGCCCTCGAGGGAATGTATGGGTTATCGGGGCTCAAAATGCTGGCAAGTCCACTCTCATAAATGCACTGGCAAGGAAAGAAGGGGCAAAAGTCACAAAGCTCACAGAAGCTCCAGTTCCTGGGACAACATTAGGGATCCTGAGAGTTGGAGGGATCTTGTCAGCTATGGCAAAGTTGTTTGACACTCCAGGACTTCTGCATCCATATTTGGTGTCCATGAGATTGAATAGGGATGAACAGAAAATGGTTGAAATACGGAAGGAGCTTCGTCCTCGGACTTATAGGATAAAGGCAGGACAAACCATACATGTTGGTGGTTTACTGAGACTAGATCTTGTTCAAGCTTCTGTTGAAACAATTTATTTAACAGTTTGGGCTTCACCAAATATTTCTTTACATATGGGGAAGACAGAAAATGCTGATGAGACATGGAGGAAACATGTTGGTATTAGGTTGCAGCCTCCAATTGGCACAGACCGAGCCGCTGAGATGGGAAAATGGGAAGAGAAGGAAATCAAAGTGTCTGGAGCAAGTTGGGATGTGAATAGCATCGATATTGCAGTAGCTGGTTTAGGTTGGTTTTCATTAGGTCTTAAAGGGGAAGCAACCTTGACGCTGTGGACATATGATGGCATTGAAATTACTTTGAGAGAGCCGCTAGTTCTTGATCGGGCACCATCTCTCGAGAGACCCGGGTTTTGGCTACCGAAAGCAATATCTGAGGCAATTGGTAACCAGAGTAAACTTGAAGCTCAGAGGAAAAAGCTTCAAATGGAGAGTGCAGATTCCCTTTCCGAGGTATCCATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003924 GO:0006275 GO:0008150 GO:0008156 GO:0009889 GO:0009890 GO:0009892 GO:0010556 GO:0010558 GO:0010605 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019219 GO:0019222 GO:0022613 GO:0030174 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032297 GO:0042254 GO:0044085 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0090329 GO:2000104 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MMR_HSR1

Protein Analysis

658

Amino Acids

72.49

Weight (kDa)

5.94

Isoelectric Point (pI)

39.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MMR_HSR1	PF01926	394 - 459	3.4e-09	50S ribosome-binding GTPase
YqeH-like_C	PF21516	510 - 607	2.8e-10	YqeH-like, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005540)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g24800 FvH4_6g24800 FvH4_6g24800 FvH4_6g24800 FvH4_6g24800 FvH4_6g24800
malus_domestica	MD12G1089400.v1.1
prunus_persica	Prupe.7G049400_v2.0.a1 Prupe.7G049400_v2.0.a1 Prupe.7G049400_v2.0.a1
pyrus_communis	pycom12g07380 pycom12g07390
rosa_chinensis	RchiOBHm_Chr3g0484591
rosa_laevigata	RLG00000023217
rosa_multiflora	Rmu_co8327473.1_g000001 Rmu_sc0000295.1_g000043 Rmu_sc0016014.1_g000001
rosa_roxburghii	Rroxscaffold_3G00248500 Rroxscaffold_6G00397610 Rroxscaffold_7G00205420
rosa_rugosa	Rorug03G0212100 Rorug03G0212200 Rorug03G0212300 Rorug03G0212400 Rorug03G0212500
rosa_samantha	Rh3AG262700 Rh3BG298100 Rh3CG295100 Rh3DG291400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	748
AasI	GACNNNNNNGTC	1 cut(s)	422
AbsI	CCTCGAGG	1 cut(s)	1170
Acc36I	ACCTGC	2 cut(s)	748, 844
AccB1I	GGYRCC	2 cut(s)	658, 1837
AccB7I	CCANNNNNTGG	1 cut(s)	1283
AciI	CCGC	7 cut(s)	78, 602, 629, 907, 1054, 1647, 1820
AclWI	GGATC	5 cut(s)	901, 947, 1294, 1307, 1325
AcoI	YGGCCR	1 cut(s)	993
AcsI	RAATTY	3 cut(s)	140, 407, 539
AcuI	CTGAAG	1 cut(s)	74
AfaI	GTAC	1 cut(s)	614
AfiI	CCNNNNNNNGG	7 cut(s)	224, 302, 907, 1283, 1631, 1863, 1960
AflIII	ACRYGT	2 cut(s)	1471, 1603
AjnI	CCWGG	4 cut(s)	295, 337, 1282, 1351
Alw21I	GWGCWC	1 cut(s)	182
Alw26I	GTCTC	3 cut(s)	1483, 1583, 1846
AlwI	GGATC	5 cut(s)	901, 947, 1294, 1307, 1325
AlwNI	CAGNNNCTG	2 cut(s)	1283, 1730
Ama87I	CYCGRG	3 cut(s)	1170, 1847, 1856
AoxI	GGCC	3 cut(s)	846, 993, 1165
ApeKI	GCWGC	6 cut(s)	23, 773, 839, 911, 929, 1621
ApoI	RAATTY	3 cut(s)	140, 407, 539
ArsI	GACNNNNNNTTYG	2 cut(s)	1845, 1877
AseI	ATTAAT	1 cut(s)	363
AspS9I	GGNCC	6 cut(s)	284, 325, 846, 1051, 1079, 1166
AsuC2I	CCSGG	3 cut(s)	823, 1857, 1858
AsuHPI	GGTGA	6 cut(s)	95, 398, 416, 497, 772, 1536
AsuII	TTCGAA	1 cut(s)	543
AvaI	CYCGRG	3 cut(s)	1170, 1847, 1856
AvaII	GGWCC	4 cut(s)	284, 325, 1051, 1079
BaeGI	GKGCMC	2 cut(s)	730, 1840
BalI	TGGCCA	1 cut(s)	995
BamHI	GGATCC	1 cut(s)	1299
BanI	GGYRCC	2 cut(s)	658, 1837
BanII	GRGCYC	2 cut(s)	245, 1198
BbsI	GAAGAC	2 cut(s)	420, 1577
Bbv12I	GWGCWC	1 cut(s)	182
BbvI	GCAGC	6 cut(s)	35, 785, 826, 923, 941, 1633
BciT130I	CCWGG	4 cut(s)	297, 339, 1284, 1353
BcnI	CCSGG	3 cut(s)	823, 1857, 1858
BcoDI	GTCTC	3 cut(s)	1483, 1583, 1846
BfaI	CTAG	5 cut(s)	687, 989, 1035, 1493, 1823
BfmI	CTRYAG	2 cut(s)	18, 636
BfuAI	ACCTGC	2 cut(s)	748, 844
BglII	AGATCT	1 cut(s)	1495
BisI	GCNGC	9 cut(s)	24, 79, 774, 840, 912, 930, 1622, 1647, 1820
BlpI	GCTNAGC	1 cut(s)	47
BlsI	GCNGC	9 cut(s)	25, 80, 775, 841, 913, 931, 1623, 1648, 1821
Bme1390I	CCNGG	7 cut(s)	297, 339, 823, 1284, 1353, 1857, 1858
Bme18I	GGWCC	4 cut(s)	284, 325, 1051, 1079
BmeT110I	CYCGRG	3 cut(s)	1170, 1847, 1856
BmgT120I	GGNCC	6 cut(s)	284, 325, 846, 1051, 1079, 1166
BmiI	GGNNCC	6 cut(s)	242, 327, 660, 1052, 1301, 1839
BmrFI	CCNGG	7 cut(s)	297, 339, 823, 1284, 1353, 1857, 1858
BmsI	GCATC	2 cut(s)	1372, 1722
BpiI	GAAGAC	2 cut(s)	420, 1577
BpmI	CTGGAG	4 cut(s)	1092, 1260, 1335, 1710
Bpu10I	CCTNAGC	2 cut(s)	903, 1065
Bpu1102I	GCTNAGC	1 cut(s)	47
Bpu14I	TTCGAA	1 cut(s)	543
BpuMI	CCSGG	3 cut(s)	823, 1857, 1858
Bsa29I	ATCGAT	1 cut(s)	1716
BsaBI	GATNNNNATC	1 cut(s)	957
BsaI	GGTCTC	1 cut(s)	1846
BsaJI	CCNNGG	8 cut(s)	218, 295, 296, 338, 1283, 1436, 1856, 1959
BsaXI	ACNNNNNCTCC	4 cut(s)	431, 461, 1258, 1288
Bsc4I	CCNNNNNNNGG	7 cut(s)	224, 302, 907, 1283, 1631, 1863, 1960
Bse1I	ACTGG	2 cut(s)	1236, 1277
Bse8I	GATNNNNATC	1 cut(s)	957
BseBI	CCWGG	4 cut(s)	297, 339, 1284, 1353
BseCI	ATCGAT	1 cut(s)	1716
BseDI	CCNNGG	8 cut(s)	218, 295, 296, 338, 1283, 1436, 1856, 1959
BseGI	GGATG	9 cut(s)	88, 271, 277, 460, 520, 592, 1363, 1402, 1708
BseJI	GATNNNNATC	1 cut(s)	957
BseLI	CCNNNNNNNGG	7 cut(s)	224, 302, 907, 1283, 1631, 1863, 1960
BseMII	CTCAG	7 cut(s)	61, 710, 1295, 1478, 1641, 1875, 1931
BseNI	ACTGG	2 cut(s)	1236, 1277
BseRI	GAGGAG	8 cut(s)	404, 449, 452, 455, 458, 691, 1001, 1089
BseSI	GKGCMC	2 cut(s)	730, 1840
BseXI	GCAGC	6 cut(s)	35, 785, 826, 923, 941, 1633
BsgI	GTGCAG	1 cut(s)	1965
BshFI	GGCC	3 cut(s)	848, 995, 1167
BshNI	GGYRCC	2 cut(s)	658, 1837
BshVI	ATCGAT	1 cut(s)	1716
BsiHKAI	GWGCWC	1 cut(s)	182
BsiHKCI	CYCGRG	3 cut(s)	1170, 1847, 1856
BsiSI	CCGG	3 cut(s)	599, 823, 1857
BslFI	GGGAC	1 cut(s)	1300
BslI	CCNNNNNNNGG	7 cut(s)	224, 302, 907, 1283, 1631, 1863, 1960
BsmAI	GTCTC	3 cut(s)	1483, 1583, 1846
BsmFI	GGGAC	1 cut(s)	1300
BsnI	GGCC	3 cut(s)	848, 995, 1167
Bso31I	GGTCTC	1 cut(s)	1846
BsoBI	CYCGRG	3 cut(s)	1170, 1847, 1856
Bsp119I	TTCGAA	1 cut(s)	543
Bsp1286I	GDGCHC	5 cut(s)	182, 245, 730, 1198, 1840
Bsp143I	GATC	8 cut(s)	813, 893, 952, 1006, 1299, 1317, 1495, 1831
Bsp1720I	GCTNAGC	1 cut(s)	47
BspACI	CCGC	7 cut(s)	78, 602, 629, 907, 1054, 1647, 1820
BspANI	GGCC	3 cut(s)	848, 995, 1167
BspCNI	CTCAG	7 cut(s)	60, 709, 1296, 1479, 1642, 1876, 1930
BspDI	ATCGAT	1 cut(s)	1716
BspLI	GGNNCC	6 cut(s)	242, 327, 660, 1052, 1301, 1839
BspMI	ACCTGC	2 cut(s)	748, 844
BspPI	GGATC	5 cut(s)	901, 947, 1294, 1307, 1325
BspQI	GCTCTTC	1 cut(s)	33
BspT104I	TTCGAA	1 cut(s)	543
BspT107I	GGYRCC	2 cut(s)	658, 1837
BspTNI	GGTCTC	1 cut(s)	1846
BsrI	ACTGG	2 cut(s)	1236, 1277
BssECI	CCNNGG	8 cut(s)	218, 295, 296, 338, 1283, 1436, 1856, 1959
BssMI	GATC	8 cut(s)	813, 893, 952, 1006, 1299, 1317, 1495, 1831
BssT1I	CCWWGG	1 cut(s)	218
Bst2UI	CCWGG	4 cut(s)	297, 339, 1284, 1353
Bst4CI	ACNGT	4 cut(s)	288, 617, 721, 1534
Bst6I	CTCTTC	4 cut(s)	33, 426, 705, 1662
BstBI	TTCGAA	1 cut(s)	543
BstC8I	GCNNGC	3 cut(s)	909, 1165, 1207
BstEII	GGTNACC	1 cut(s)	1895
BstENI	CCTNNNNNAGG	1 cut(s)	1958
BstF5I	GGATG	9 cut(s)	88, 271, 277, 460, 520, 592, 1363, 1402, 1708
BstKTI	GATC	8 cut(s)	816, 896, 955, 1009, 1302, 1320, 1498, 1834
BstMAI	GTCTC	3 cut(s)	1483, 1583, 1846
BstMBI	GATC	8 cut(s)	813, 893, 952, 1006, 1299, 1317, 1495, 1831
BstMWI	GCNNNNNNNGC	3 cut(s)	692, 845, 1202
BstNI	CCWGG	4 cut(s)	297, 339, 1284, 1353
BstNSI	RCATGY	2 cut(s)	1475, 1607
BstPI	GGTNACC	1 cut(s)	1895
BstSCI	CCNGG	7 cut(s)	295, 337, 821, 1282, 1351, 1855, 1856
BstSFI	CTRYAG	2 cut(s)	18, 636
BstSLI	GKGCMC	2 cut(s)	730, 1840
BstV1I	GCAGC	6 cut(s)	35, 785, 826, 923, 941, 1633
BstV2I	GAAGAC	2 cut(s)	420, 1577
BstX2I	RGATCY	3 cut(s)	1299, 1317, 1495
BstXI	CCANNNNNNTGG	1 cut(s)	556
BstYI	RGATCY	3 cut(s)	1299, 1317, 1495
Bsu15I	ATCGAT	1 cut(s)	1716
BsuRI	GGCC	3 cut(s)	848, 995, 1167
BsuTUI	ATCGAT	1 cut(s)	1716
BtsCI	GGATG	9 cut(s)	88, 271, 277, 460, 520, 592, 1363, 1402, 1708
BtsIMutI	CAGTG	3 cut(s)	180, 726, 1229
BveI	ACCTGC	2 cut(s)	748, 844
Cac8I	GCNNGC	3 cut(s)	909, 1165, 1207
CaiI	CAGNNNCTG	2 cut(s)	1283, 1730
Cfr13I	GGNCC	6 cut(s)	284, 325, 846, 1051, 1079, 1166
Cfr9I	CCCGGG	1 cut(s)	1856
ClaI	ATCGAT	1 cut(s)	1716
CseI	GACGC	1 cut(s)	1786
Csp6I	GTAC	1 cut(s)	613
CspCI	CAANNNNNGTGG	2 cut(s)	985, 1020
CviAII	CATG	4 cut(s)	1381, 1472, 1593, 1604
CviQI	GTAC	1 cut(s)	613
DpnI	GATC	8 cut(s)	815, 895, 954, 1008, 1301, 1319, 1497, 1833
DpnII	GATC	8 cut(s)	813, 893, 952, 1006, 1299, 1317, 1495, 1831
DrdI	GACNNNNNNGTC	1 cut(s)	422
DseDI	GACNNNNNNGTC	1 cut(s)	422
EaeI	YGGCCR	1 cut(s)	993
Eam1104I	CTCTTC	4 cut(s)	33, 426, 705, 1662
EarI	CTCTTC	4 cut(s)	33, 426, 705, 1662
EciI	GGCGGA	1 cut(s)	1043
Eco130I	CCWWGG	1 cut(s)	218
Eco24I	GRGCYC	2 cut(s)	245, 1198
Eco31I	GGTCTC	1 cut(s)	1846
Eco47I	GGWCC	4 cut(s)	284, 325, 1051, 1079
Eco57I	CTGAAG	1 cut(s)	74
Eco88I	CYCGRG	3 cut(s)	1170, 1847, 1856
Eco91I	GGTNACC	1 cut(s)	1895
EcoNI	CCTNNNNNAGG	1 cut(s)	1958
EcoO109I	RGGNCCY	2 cut(s)	325, 1079
EcoO65I	GGTNACC	1 cut(s)	1895
EcoRI	GAATTC	1 cut(s)	539
EcoRII	CCWGG	4 cut(s)	295, 337, 1282, 1351
EcoT14I	CCWWGG	1 cut(s)	218
EcoT38I	GRGCYC	2 cut(s)	245, 1198
ErhI	CCWWGG	1 cut(s)	218
FaeI	CATG	4 cut(s)	1384, 1475, 1596, 1607
FaqI	GGGAC	1 cut(s)	1300
FatI	CATG	4 cut(s)	1380, 1471, 1592, 1603
FauI	CCCGC	2 cut(s)	595, 900
FauNDI	CATATG	2 cut(s)	1563, 1789
Fnu4HI	GCNGC	9 cut(s)	24, 79, 774, 840, 912, 930, 1622, 1647, 1820
FokI	GGATG	9 cut(s)	75, 278, 284, 467, 527, 599, 1350, 1409, 1715
FriOI	GRGCYC	2 cut(s)	245, 1198
Fsp4HI	GCNGC	9 cut(s)	24, 79, 774, 840, 912, 930, 1622, 1647, 1820
FspBI	CTAG	5 cut(s)	687, 989, 1035, 1493, 1823
GluI	GCNGC	9 cut(s)	24, 79, 774, 840, 912, 930, 1622, 1647, 1820
GsuI	CTGGAG	4 cut(s)	1092, 1260, 1335, 1710
HaeIII	GGCC	3 cut(s)	848, 995, 1167
HapII	CCGG	3 cut(s)	599, 823, 1857
HgaI	GACGC	1 cut(s)	1786
Hin1II	CATG	4 cut(s)	1384, 1475, 1596, 1607
HindIII	AAGCTT	4 cut(s)	56, 980, 1506, 1928
HinfI	GANTC	6 cut(s)	7, 117, 530, 1135, 1157, 1949
HpaII	CCGG	3 cut(s)	599, 823, 1857
HphI	GGTGA	6 cut(s)	95, 398, 416, 497, 772, 1536
Hpy166II	GTNNAC	4 cut(s)	1215, 1484, 1785, 1907
Hpy188III	TCNNGA	6 cut(s)	1132, 1303, 1689, 1829, 1847, 1849
Hpy8I	GTNNAC	4 cut(s)	1215, 1484, 1785, 1907
HpyAV	CCTTC	8 cut(s)	42, 108, 255, 649, 1156, 1238, 1417, 1666
HpyCH4III	ACNGT	4 cut(s)	288, 617, 721, 1534
HpyCH4V	TGCA	7 cut(s)	316, 929, 1229, 1363, 1621, 1724, 1946
HpyF10VI	GCNNNNNNNGC	3 cut(s)	692, 845, 1202
Hsp92II	CATG	4 cut(s)	1384, 1475, 1596, 1607
Kzo9I	GATC	8 cut(s)	813, 893, 952, 1006, 1299, 1317, 1495, 1831
LguI	GCTCTTC	1 cut(s)	33
LmnI	GCTCC	4 cut(s)	240, 1279, 1426, 1691
Lsp1109I	GCAGC	6 cut(s)	35, 785, 826, 923, 941, 1633
LweI	GCATC	2 cut(s)	1372, 1722
MaeI	CTAG	5 cut(s)	687, 989, 1035, 1493, 1823
MaeIII	GTNAC	4 cut(s)	617, 715, 1255, 1895
MalI	GATC	8 cut(s)	815, 895, 954, 1008, 1301, 1319, 1497, 1833
MboI	GATC	8 cut(s)	813, 893, 952, 1006, 1299, 1317, 1495, 1831
MfeI	CAATTG	2 cut(s)	1629, 1890
MflI	RGATCY	3 cut(s)	1299, 1317, 1495
MhlI	GDGCHC	5 cut(s)	182, 245, 730, 1198, 1840
MlsI	TGGCCA	1 cut(s)	995
MluNI	TGGCCA	1 cut(s)	995
MmeI	TCCRAC	1 cut(s)	1291
Mox20I	TGGCCA	1 cut(s)	995
MscI	TGGCCA	1 cut(s)	995
MseI	TTAA	7 cut(s)	363, 743, 785, 831, 935, 1529, 1758
MslI	CAYNNNNRTG	1 cut(s)	1476
Msp20I	TGGCCA	1 cut(s)	995
MspA1I	CMGCKG	2 cut(s)	776, 1649
MspI	CCGG	3 cut(s)	599, 823, 1857
MspR9I	CCNGG	7 cut(s)	297, 339, 823, 1284, 1353, 1857, 1858
MunI	CAATTG	2 cut(s)	1629, 1890
MvaI	CCWGG	4 cut(s)	297, 339, 1284, 1353
MwoI	GCNNNNNNNGC	3 cut(s)	692, 845, 1202
NciI	CCSGG	3 cut(s)	823, 1857, 1858
NdeI	CATATG	2 cut(s)	1563, 1789
NdeII	GATC	8 cut(s)	813, 893, 952, 1006, 1299, 1317, 1495, 1831
NlaIII	CATG	4 cut(s)	1384, 1475, 1596, 1607
NlaIV	GGNNCC	6 cut(s)	242, 327, 660, 1052, 1301, 1839
NmuCI	GTSAC	1 cut(s)	1255
NspI	RCATGY	2 cut(s)	1475, 1607
NspV	TTCGAA	1 cut(s)	543
PaeR7I	CTCGAG	2 cut(s)	1170, 1847
PaqCI	CACCTGC	1 cut(s)	748
PasI	CCCWGGG	1 cut(s)	296
PciI	ACATGT	2 cut(s)	1471, 1603
PciSI	GCTCTTC	1 cut(s)	33
PfeI	GAWTC	5 cut(s)	117, 530, 1135, 1157, 1949
PflMI	CCANNNNNTGG	1 cut(s)	1283
PfoI	TCCNGGA	1 cut(s)	1351
PkrI	GCNGC	9 cut(s)	25, 80, 775, 841, 913, 931, 1623, 1648, 1821
PpuMI	RGGWCCY	2 cut(s)	325, 1079
PscI	ACATGT	2 cut(s)	1471, 1603
PshBI	ATTAAT	1 cut(s)	363
Psp5II	RGGWCCY	2 cut(s)	325, 1079
Psp6I	CCWGG	4 cut(s)	295, 337, 1282, 1351
PspEI	GGTNACC	1 cut(s)	1895
PspGI	CCWGG	4 cut(s)	295, 337, 1282, 1351
PspN4I	GGNNCC	6 cut(s)	242, 327, 660, 1052, 1301, 1839
PspPI	GGNCC	6 cut(s)	284, 325, 846, 1051, 1079, 1166
PspPPI	RGGWCCY	2 cut(s)	325, 1079
PspXI	VCTCGAGB	1 cut(s)	1170
PstNI	CAGNNNCTG	2 cut(s)	1283, 1730
PsuI	RGATCY	3 cut(s)	1299, 1317, 1495
PvuII	CAGCTG	1 cut(s)	776
RsaI	GTAC	1 cut(s)	614
RsaNI	GTAC	1 cut(s)	613
RseI	CAYNNNNRTG	1 cut(s)	1476
SapI	GCTCTTC	1 cut(s)	33
SaqAI	TTAA	7 cut(s)	363, 743, 785, 831, 935, 1529, 1758
SatI	GCNGC	9 cut(s)	24, 79, 774, 840, 912, 930, 1622, 1647, 1820
Sau3AI	GATC	8 cut(s)	813, 893, 952, 1006, 1299, 1317, 1495, 1831
Sau96I	GGNCC	6 cut(s)	284, 325, 846, 1051, 1079, 1166
ScrFI	CCNGG	7 cut(s)	297, 339, 823, 1284, 1353, 1857, 1858
SduI	GDGCHC	5 cut(s)	182, 245, 730, 1198, 1840
SfaNI	GCATC	2 cut(s)	1372, 1722
SfcI	CTRYAG	2 cut(s)	18, 636
Sfr274I	CTCGAG	2 cut(s)	1170, 1847
SfuI	TTCGAA	1 cut(s)	543
SinI	GGWCC	4 cut(s)	284, 325, 1051, 1079
SlaI	CTCGAG	2 cut(s)	1170, 1847
SmaI	CCCGGG	1 cut(s)	1858
SmiMI	CAYNNNNRTG	1 cut(s)	1476
SmlI	CTYRAG	2 cut(s)	1170, 1847
SmoI	CTYRAG	2 cut(s)	1170, 1847
SsiI	CCGC	7 cut(s)	78, 602, 629, 907, 1054, 1647, 1820
SspI	AATATT	1 cut(s)	1552
SspMI	CTAG	5 cut(s)	687, 989, 1035, 1493, 1823
StyD4I	CCNGG	7 cut(s)	295, 337, 821, 1282, 1351, 1855, 1856
StyI	CCWWGG	1 cut(s)	218
TaaI	ACNGT	4 cut(s)	288, 617, 721, 1534
TaqI	TCGA	7 cut(s)	420, 426, 462, 543, 1171, 1716, 1848
TaqII	GACCGA	1 cut(s)	1656
TauI	GCSGC	3 cut(s)	81, 1649, 1822
TfiI	GAWTC	5 cut(s)	117, 530, 1135, 1157, 1949
Tru1I	TTAA	7 cut(s)	363, 743, 785, 831, 935, 1529, 1758
Tru9I	TTAA	7 cut(s)	363, 743, 785, 831, 935, 1529, 1758
TscAI	CASTG	3 cut(s)	187, 726, 1236
TseFI	GTSAC	1 cut(s)	1255
TseI	GCWGC	6 cut(s)	23, 773, 839, 911, 929, 1621
Tsp45I	GTSAC	1 cut(s)	1255
TspDTI	ATGAA	7 cut(s)	135, 471, 552, 662, 729, 1413, 1737
TspGWI	ACGGA	1 cut(s)	1435
TspMI	CCCGGG	1 cut(s)	1856
TspRI	CASTG	3 cut(s)	187, 726, 1236
Van91I	CCANNNNNTGG	1 cut(s)	1283
VpaK11BI	GGWCC	4 cut(s)	284, 325, 1051, 1079
VspI	ATTAAT	1 cut(s)	363
XagI	CCTNNNNNAGG	1 cut(s)	1958
XapI	RAATTY	3 cut(s)	140, 407, 539
XceI	RCATGY	2 cut(s)	1475, 1607
XcmI	CCANNNNNNNNNTGG	2 cut(s)	200, 856
XhoI	CTCGAG	2 cut(s)	1170, 1847
XmaI	CCCGGG	1 cut(s)	1856
XspI	CTAG	5 cut(s)	687, 989, 1035, 1493, 1823

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.