Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0000418

Physical Location & Seq

Genomic Coordinates Forward (+)

19004790 .. 19014035

Gene Structure 9246 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0212100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2334 bp

ATGTGGCGCTCTCTCTGGCGATCCATCGATCGCTTCTCTCTCCAGTACTTCAAACACATAATCATTGAACTGCAGCAAATCAAAGTTGTGGATAGGCATAACAGGGAATTTGTCATAGATTTACTACAGTCCATAGTGGAGCTAGTTACTTATGGCGATAGACAAGATCCACTGATTTTCGAATGCTTTATGGAATACCAAGTTTTAGCAGAATTTGTTCGTGTGCTGAAGATCAGTAGAAAATCAAGAATTGAGGCACCATTGCTCCAGTATCTGAGTATAATGATTCAAAACATGAATAGTGAACATTCAATTTATTATTGTTTGAGCAATGACTATATCAACAGCATTATTGGACATGAGTTTGAATTTGAAGGAGACCTAGCACTATATTATGTATCCTTCTTGAGAGCAGTGAGCAATAAACTAAACAAGGACACACTTTGCCTTCTTCTGAAGGTTCATGGGGATGCTGTAGTTTCATTTCCCCTGTATTATGAGGCTCTCAAATTTTCCCACCACCGGGAAAAGATGATTCAGACAGCTATCCGTGCATTAACTCTCAGTATATATAATGTTAGTGATGATATGGTTTATCAATATATAACTGGTCCTCCAGTCTCAAAGTATTTCTCAGACTTGGTTGCAAGCTTAAGAGAGCAATTCTTTCATCTAGATTCCCTTGTCCAGGCTACTAATGGGAGGCTTACATATCAGAAGAGAGAAGAACTTCTTTTGGAAACGGATGAGATCATCGACGATTTGTATTACCTGAAGGATATGCTTGGTATCGGTGACTCCCGTTTGAGTAGAGTAGTTATGGAAAATCTTCTTAGAGTATTGGTCTTTCCCATACTAATTCCACTACTGCAGTTGACGCAGATTAATGGCTCAAATTTATCTGTAGTCACGTCTTTCTATACTGTTTCTCGTCTGCTTCAAGTCATTGGTGGAAAAGGCATGTTCAACTCTGTGGCTGGAGTCATTTTATATCCTTACATGGCCTCAAGTGTGAGAGTCTGTATTGAAAGGGACTCAACAGAGAGCATTGGTGATGCTAAATCTATATTCAACCAATTGAGTGACATGGAAAAGGTAGAATCTTCTGATTCTGAGGCTGAAGGAGCAGAAAGAATTAGCTGCCCGAGAGATACTATCCCTGTCGACAGGAATGGAATACTAGCTCATATTTTCTCGGAGAGTTATAGTCTATTGCTATCTTCACTGTTTGTATTATTTATTTTAGCAGAAGCAAAAGATCTTCATCCACTGCTCTTTCGAATGATTGGATTAAGTGGGATGCAACATATGCTTGCAACAGATGGAAATACTGGAAATATCTTTGTGATATATAGGGATCAGATTTTAAATGCATTATTGAAGGTTTTAGCAAGTCAACCACCTTTCTCTATACTAATACAATGGCATACAGGGTGGTTCTTGCGGAAGCTATTGATTTTTCAAGGAAAAGGTCTTGGTTGTCATAACACCCAGCTATTCAACGCCTCATACCAGCAGTCTCGTGAATACCTTCAGAAGGAACTTGATGGATGCTGGTTTGATCATATCCCAGAGGTCTTAAGAAATGAATGGGCAGGCTGTAAAGCAGCTCTGGAGGAATCATCCCAATGTAAAGATCCTTTTTTTGTCTTAGAGCTCGACTCTAGCCAACAAAATACTGATGGTGATACAACGTCCTACCTTGCGTGGCAGAGGATGGTTGACACTGTGAAGGTTTTCATTCTACATCTTCAGCTTAAATCATGTATTCTCAAAGGAGAACTGCTTGAAGAACCTATGCTGAACTTAAGCAGTGCAGTGGCTGACTCTGGCAAAACCCATGCTTCAGATGTTGCATCTGCAAGCTTTGGGTCAGAGGTTCCTTTAGGATCTGGAATACCTTGTCGAATCGCATTTTCCAATGCAGGAATTCGGGATATCTACTTGATACCTGTGGCAAGGAAAACATCAGGAAAATTGCTTCTTGCAGAGAAGCATCCTTTCCGCAGTCATCGAGGAACGGTACTTGCTATTGCACCATTGGCTGGGTCAAATCCGAAGGTAGATGAGGACCATCCAACATGGTTGCATCTTCAGATAAGAGAGTTCGAACCAAAATTCCGTACTAAATTTAGAGGATATCATGCAGCGAAGTCCAATCACATTGTTGATGGCAGATGGACGCTTGGTTTTTCAGATGCAAAGGCTTGCGCGGCTGCTAGATCATCAGTACTTGAGGAAACTCGGAAGCTGAGATCCTCTGTTGAGAGCTTACTTGCTCCTCTACTGCAAAATAACTGTCTAGGAAATTTATCAGAGAGCGAAGATGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003924 GO:0006275 GO:0008150 GO:0008156 GO:0009889 GO:0009890 GO:0009892 GO:0010556 GO:0010558 GO:0010605 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019219 GO:0019222 GO:0022613 GO:0030174 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032297 GO:0042254 GO:0044085 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0090329 GO:2000104 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MMR_HSR1

Protein Analysis

777

Amino Acids

88.12

Weight (kDa)

5.91

Isoelectric Point (pI)

41.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FPL	PF09758	42 - 191	3.1e-47	Uncharacterised conserved protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000418)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g25200 FvH4_5g34450 FvH4_6g05730 FvH4_6g05740 FvH4_7g06570
rosa_chinensis	RchiOBHm_Chr1g0333911 RchiOBHm_Chr3g0454621 RchiOBHm_Chr3g0454651 RchiOBHm_Chr5g0045711 RchiOBHm_Chr5g0045741 RchiOBHm_Chr5g0045961 RchiOBHm_Chr5g0048841 RchiOBHm_Chr5g0048911 RchiOBHm_Chr6g0266631 RchiOBHm_Chr6g0266821 RchiOBHm_Chr7g0235081
rosa_laevigata	RLG00000001184 RLG00000010084 RLG00000013949 RLG00000013954 RLG00000013958 RLG00000013962 RLG00000013991 RLG00000014031 RLG00000014041 RLG00000014077 RLG00000014088 RLG00000014094 RLG00000025427 RLG00000025429 RLG00000029394 RLG00000029510 RLG00000029526 RLG00000034372 RLG00000034376
rosa_multiflora	Rmu_co8426689.1_g000001 Rmu_co8428107.1_g000001 Rmu_sc0000026.1_g000016 Rmu_sc0000115.1_g000020 Rmu_sc0001035.1_g000067 Rmu_sc0001035.1_g000078 Rmu_sc0001208.1_g000032 Rmu_sc0001208.1_g000034 Rmu_sc0001792.1_g000031 Rmu_sc0001792.1_g000034 Rmu_sc0002239.1_g000009 Rmu_sc0002722.1_g000010 Rmu_sc0003628.1_g000026 Rmu_sc0004304.1_g000006 Rmu_sc0006003.1_g000019 Rmu_sc0006413.1_g000005 Rmu_sc0006413.1_g000020 Rmu_sc0007177.1_g000007 Rmu_sc0020815.1_g000004
rosa_roxburghii	Rroxscaffold_1G00033010 Rroxscaffold_3G00226320 Rroxscaffold_6G00424890 Rroxscaffold_6G00424920 Rroxscaffold_7G00195150
rosa_rugosa	Rorug01G0112100 Rorug01G0112200 Rorug01G0119400 Rorug03G0000700 Rorug03G0000900 Rorug03G0211800 Rorug03G0211900 Rorug03G0212000 Rorug03G0212100 Rorug05G0224400 Rorug05G0232500 Rorug05G0232700 Rorug05G0573400 Rorug06G0025800 Rorug07G0143000 Rorug07G0143100
rosa_samantha	Rh1AG136300 Rh1DG141400 Rh1DG146800 Rh3AG060600 Rh3AG060800 Rh6BG147300 Rh6BG148700 Rh6BG149100 Rh6BG160100 Rh6BG161000 Rh7AG442200
rosa_wichuraiana	Rw0G021480 Rw1G011300 Rw3G004710 Rw3G004730 Rw3G025710 Rw5G028590 Rw5G028720 Rw5G028760 Rw5G030090 Rw5G030310 Rw5G030530 Rw7G036760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	256
AccB7I	CCANNNNNTGG	1 cut(s)	2045
AccI	GTMKAC	1 cut(s)	1164
AccII	CGCG	1 cut(s)	2213
AciI	CCGC	3 cut(s)	1444, 2005, 2213
AclWI	GGATC	6 cut(s)	15, 161, 1365, 1631, 1897, 2250
AcsI	RAATTY	9 cut(s)	107, 212, 368, 509, 895, 1929, 2117, 2129, 2308
AcuI	CTGAAG	8 cut(s)	248, 476, 794, 1140, 1517, 1736, 1830, 2078
AfaI	GTAC	4 cut(s)	47, 2025, 2125, 2232
AfiI	CCNNNNNNNGG	5 cut(s)	522, 523, 688, 1537, 2045
AflII	CTTAAG	3 cut(s)	652, 1579, 1807
AjiI	CACGTC	1 cut(s)	912
AjnI	CCWGG	1 cut(s)	687
AloI	GAACNNNNNNTCC	2 cut(s)	2103, 2135
Alw21I	GWGCWC	1 cut(s)	1659
Alw26I	GTCTC	3 cut(s)	372, 625, 1524
AlwI	GGATC	6 cut(s)	15, 161, 1365, 1631, 1897, 2250
AlwNI	CAGNNNCTG	2 cut(s)	274, 1823
Ama87I	CYCGRG	1 cut(s)	1144
AoxI	GGCC	1 cut(s)	1002
ApeKI	GCWGC	5 cut(s)	73, 1140, 1607, 2147, 2216
ApoI	RAATTY	9 cut(s)	107, 212, 368, 509, 895, 1929, 2117, 2129, 2308
ArsI	GACNNNNNNTTYG	2 cut(s)	2284, 2316
AseI	ATTAAT	1 cut(s)	885
Asp700I	GAANNNNTTC	5 cut(s)	216, 729, 828, 1530, 1736
AspLEI	GCGC	2 cut(s)	9, 2213
AspS9I	GGNCC	2 cut(s)	611, 2071
AsuC2I	CCSGG	1 cut(s)	524
AsuHPI	GGTGA	3 cut(s)	806, 1064, 1697
AsuII	TTCGAA	3 cut(s)	180, 1279, 2109
AvaI	CYCGRG	1 cut(s)	1144
AvaII	GGWCC	2 cut(s)	611, 2071
BanI	GGYRCC	1 cut(s)	256
BanII	GRGCYC	1 cut(s)	1659
BauI	CACGAG	1 cut(s)	1521
Bbv12I	GWGCWC	1 cut(s)	1659
BbvI	GCAGC	5 cut(s)	85, 1127, 1619, 2159, 2203
BccI	CCATC	8 cut(s)	32, 1316, 1541, 1676, 1711, 2082, 2165, 2172
BciT130I	CCWGG	1 cut(s)	689
BciVI	GTATCC	1 cut(s)	409
BclI	TGATCA	1 cut(s)	1561
BcnI	CCSGG	1 cut(s)	524
BcoDI	GTCTC	3 cut(s)	372, 625, 1524
BfaI	CTAG	7 cut(s)	143, 383, 674, 1181, 1665, 2220, 2303
BfmI	CTRYAG	5 cut(s)	71, 125, 474, 869, 903
BfoI	RGCGCY	1 cut(s)	10
BfrI	CTTAAG	3 cut(s)	652, 1579, 1807
BfuI	GTATCC	1 cut(s)	409
BglII	AGATCT	1 cut(s)	1258
BisI	GCNGC	6 cut(s)	74, 1141, 1608, 2148, 2214, 2217
BlsI	GCNGC	6 cut(s)	75, 1142, 1609, 2149, 2215, 2218
BmcAI	AGTACT	2 cut(s)	47, 2232
Bme1390I	CCNGG	2 cut(s)	524, 689
Bme18I	GGWCC	2 cut(s)	611, 2071
BmeT110I	CYCGRG	1 cut(s)	1144
BmgBI	CACGTC	1 cut(s)	912
BmgT120I	GGNCC	2 cut(s)	611, 2071
BmiI	GGNNCC	2 cut(s)	258, 1881
BmrFI	CCNGG	2 cut(s)	524, 689
BmsI	GCATC	8 cut(s)	460, 1045, 1290, 1541, 1865, 2005, 2098, 2188
BplI	GAGNNNNNCTC	2 cut(s)	1646, 1678
BpmI	CTGGAG	5 cut(s)	26, 251, 600, 999, 1634
Bpu14I	TTCGAA	3 cut(s)	180, 1279, 2109
BpuEI	CTTGAG	3 cut(s)	427, 991, 2255
BpuMI	CCSGG	1 cut(s)	524
Bsa29I	ATCGAT	1 cut(s)	27
BsaBI	GATNNNNATC	1 cut(s)	1263
BsaI	GGTCTC	1 cut(s)	372
BsaXI	ACNNNNNCTCC	4 cut(s)	249, 279, 598, 628
Bsc4I	CCNNNNNNNGG	5 cut(s)	522, 523, 688, 1537, 2045
Bse1I	ACTGG	5 cut(s)	43, 268, 613, 617, 1336
Bse3DI	GCAATG	2 cut(s)	260, 337
Bse8I	GATNNNNATC	1 cut(s)	1263
BseBI	CCWGG	1 cut(s)	689
BseCI	ATCGAT	1 cut(s)	27
BseGI	GGATG	9 cut(s)	475, 751, 1264, 1305, 1556, 1622, 1722, 1996, 2074
BseJI	GATNNNNATC	1 cut(s)	1263
BseLI	CCNNNNNNNGG	5 cut(s)	522, 523, 688, 1537, 2045
BseMI	GCAATG	2 cut(s)	260, 337
BseMII	CTCAG	5 cut(s)	266, 577, 648, 1104, 2243
BseNI	ACTGG	5 cut(s)	43, 268, 613, 617, 1336
BseRI	GAGGAG	1 cut(s)	2271
BseXI	GCAGC	5 cut(s)	85, 1127, 1619, 2159, 2203
BseYI	CCCAGC	2 cut(s)	1491, 2045
BsgI	GTGCAG	1 cut(s)	1836
Bsh1236I	CGCG	1 cut(s)	2213
Bsh1285I	CGRYCG	1 cut(s)	31
BshFI	GGCC	1 cut(s)	1004
BshNI	GGYRCC	1 cut(s)	256
BshVI	ATCGAT	1 cut(s)	27
BsiEI	CGRYCG	1 cut(s)	31
BsiHKAI	GWGCWC	1 cut(s)	1659
BsiHKCI	CYCGRG	1 cut(s)	1144
BsiSI	CCGG	1 cut(s)	523
BslFI	GGGAC	1 cut(s)	1046
BslI	CCNNNNNNNGG	5 cut(s)	522, 523, 688, 1537, 2045
BsmAI	GTCTC	3 cut(s)	372, 625, 1524
BsmFI	GGGAC	1 cut(s)	1046
BsmI	GAATGC	1 cut(s)	188
BsnI	GGCC	1 cut(s)	1004
Bso31I	GGTCTC	1 cut(s)	372
BsoBI	CYCGRG	1 cut(s)	1144
Bsp119I	TTCGAA	3 cut(s)	180, 1279, 2109
Bsp1286I	GDGCHC	1 cut(s)	1659
BspACI	CCGC	3 cut(s)	1444, 2005, 2213
BspANI	GGCC	1 cut(s)	1004
BspCNI	CTCAG	5 cut(s)	267, 576, 647, 1105, 2244
BspDI	ATCGAT	1 cut(s)	27
BspFNI	CGCG	1 cut(s)	2213
BspLI	GGNNCC	2 cut(s)	258, 1881
BspMAI	CTGCAG	2 cut(s)	75, 873
BspPI	GGATC	6 cut(s)	15, 161, 1365, 1631, 1897, 2250
BspT104I	TTCGAA	3 cut(s)	180, 1279, 2109
BspT107I	GGYRCC	1 cut(s)	256
BspTI	CTTAAG	3 cut(s)	652, 1579, 1807
BspTNI	GGTCTC	1 cut(s)	372
BsrDI	GCAATG	2 cut(s)	260, 337
BsrI	ACTGG	5 cut(s)	43, 268, 613, 617, 1336
BssSI	CACGAG	1 cut(s)	1521
Bst2BI	CACGAG	1 cut(s)	1521
Bst2UI	CCWGG	1 cut(s)	689
Bst4CI	ACNGT	6 cut(s)	129, 925, 1227, 1729, 2023, 2300
Bst6I	CTCTTC	1 cut(s)	713
BstAFI	CTTAAG	3 cut(s)	652, 1579, 1807
BstAPI	GCANNNNNTGC	1 cut(s)	1309
BstBI	TTCGAA	3 cut(s)	180, 1279, 2109
BstC8I	GCNNGC	5 cut(s)	649, 1314, 1597, 1864, 2209
BstDEI	CTNAG	7 cut(s)	275, 563, 634, 833, 1113, 1651, 2252
BstENI	CCTNNNNNAGG	2 cut(s)	686, 1535
BstF5I	GGATG	9 cut(s)	475, 751, 1264, 1305, 1556, 1622, 1722, 1996, 2074
BstFNI	CGCG	1 cut(s)	2213
BstH2I	RGCGCY	1 cut(s)	10
BstHHI	GCGC	2 cut(s)	9, 2213
BstMAI	GTCTC	3 cut(s)	372, 625, 1524
BstMCI	CGRYCG	1 cut(s)	31
BstMWI	GCNNNNNNNGC	6 cut(s)	551, 877, 1124, 1309, 2042, 2213
BstNI	CCWGG	1 cut(s)	689
BstNSI	RCATGY	1 cut(s)	964
BstSCI	CCNGG	2 cut(s)	522, 687
BstSFI	CTRYAG	5 cut(s)	71, 125, 474, 869, 903
BstUI	CGCG	1 cut(s)	2213
BstV1I	GCAGC	5 cut(s)	85, 1127, 1619, 2159, 2203
BstX2I	RGATCY	5 cut(s)	166, 1258, 1636, 1889, 2255
BstYI	RGATCY	5 cut(s)	166, 1258, 1636, 1889, 2255
Bsu15I	ATCGAT	1 cut(s)	27
BsuI	GTATCC	1 cut(s)	409
BsuRI	GGCC	1 cut(s)	1004
BsuTUI	ATCGAT	1 cut(s)	27
BtrI	CACGTC	1 cut(s)	912
BtsCI	GGATG	9 cut(s)	475, 751, 1264, 1305, 1556, 1622, 1722, 1996, 2074
BtsI	GCAGTG	4 cut(s)	420, 1268, 1819, 1824
BtsIMutI	CAGTG	7 cut(s)	170, 420, 1223, 1268, 1725, 1819, 1824
Cac8I	GCNNGC	5 cut(s)	649, 1314, 1597, 1864, 2209
CaiI	CAGNNNCTG	2 cut(s)	274, 1823
CfoI	GCGC	2 cut(s)	9, 2213
Cfr13I	GGNCC	2 cut(s)	611, 2071
ClaI	ATCGAT	1 cut(s)	27
CseI	GACGC	2 cut(s)	886, 2191
Csp6I	GTAC	4 cut(s)	46, 2024, 2124, 2231
CviQI	GTAC	4 cut(s)	46, 2024, 2124, 2231
DdeI	CTNAG	7 cut(s)	275, 563, 634, 833, 1113, 1651, 2252
DraI	TTTAAA	1 cut(s)	1368
Eam1104I	CTCTTC	1 cut(s)	713
EarI	CTCTTC	1 cut(s)	713
Ecl136II	GAGCTC	1 cut(s)	1657
Eco24I	GRGCYC	1 cut(s)	1659
Eco31I	GGTCTC	1 cut(s)	372
Eco32I	GATATC	2 cut(s)	1939, 2141
Eco47I	GGWCC	2 cut(s)	611, 2071
Eco53kI	GAGCTC	1 cut(s)	1657
Eco57I	CTGAAG	8 cut(s)	248, 476, 794, 1140, 1517, 1736, 1830, 2078
Eco88I	CYCGRG	1 cut(s)	1144
EcoICRI	GAGCTC	1 cut(s)	1657
EcoNI	CCTNNNNNAGG	2 cut(s)	686, 1535
EcoRI	GAATTC	1 cut(s)	1929
EcoRII	CCWGG	1 cut(s)	687
EcoRV	GATATC	2 cut(s)	1939, 2141
EcoT22I	ATGCAT	1 cut(s)	1375
EcoT38I	GRGCYC	1 cut(s)	1659
FalI	AAGNNNNNCTT	2 cut(s)	717, 749
FaqI	GGGAC	1 cut(s)	1046
FauNDI	CATATG	1 cut(s)	1308
FbaI	TGATCA	1 cut(s)	1561
FblI	GTMKAC	1 cut(s)	1164
Fnu4HI	GCNGC	6 cut(s)	74, 1141, 1608, 2148, 2214, 2217
FokI	GGATG	9 cut(s)	482, 758, 1251, 1312, 1563, 1609, 1729, 1983, 2061
FriOI	GRGCYC	1 cut(s)	1659
Fsp4HI	GCNGC	6 cut(s)	74, 1141, 1608, 2148, 2214, 2217
FspBI	CTAG	7 cut(s)	143, 383, 674, 1181, 1665, 2220, 2303
GlaI	GCGC	2 cut(s)	8, 2212
GluI	GCNGC	6 cut(s)	74, 1141, 1608, 2148, 2214, 2217
GsaI	CCCAGC	2 cut(s)	1495, 2049
GsuI	CTGGAG	5 cut(s)	26, 251, 600, 999, 1634
HaeII	RGCGCY	1 cut(s)	10
HaeIII	GGCC	1 cut(s)	1004
HapII	CCGG	1 cut(s)	523
HgaI	GACGC	2 cut(s)	886, 2191
HhaI	GCGC	2 cut(s)	9, 2213
Hin6I	GCGC	2 cut(s)	7, 2211
HinP1I	GCGC	2 cut(s)	7, 2211
HincII	GTYRAC	4 cut(s)	876, 1165, 1397, 1723
HindII	GTYRAC	4 cut(s)	876, 1165, 1397, 1723
HindIII	AAGCTT	2 cut(s)	649, 1864
HpaII	CCGG	1 cut(s)	523
HphI	GGTGA	3 cut(s)	806, 1064, 1697
Hpy166II	GTNNAC	5 cut(s)	305, 876, 1165, 1397, 1723
Hpy188III	TCNNGA	8 cut(s)	246, 406, 674, 1523, 1613, 1893, 1934, 1971
Hpy8I	GTNNAC	5 cut(s)	305, 876, 1165, 1397, 1723
Hpy99I	CGWCG	1 cut(s)	761
HpyCH4III	ACNGT	6 cut(s)	129, 925, 1227, 1729, 2023, 2300
HpyCH4IV	ACGT	2 cut(s)	911, 1694
HpyF10VI	GCNNNNNNNGC	6 cut(s)	551, 877, 1124, 1309, 2042, 2213
HpyF3I	CTNAG	7 cut(s)	275, 563, 634, 833, 1113, 1651, 2252
HpySE526I	ACGT	2 cut(s)	911, 1694
HspAI	GCGC	2 cut(s)	7, 2211
Ksp22I	TGATCA	1 cut(s)	1561
LmnI	GCTCC	4 cut(s)	139, 270, 1124, 2284
Lsp1109I	GCAGC	5 cut(s)	85, 1127, 1619, 2159, 2203
LweI	GCATC	8 cut(s)	460, 1045, 1290, 1541, 1865, 2005, 2098, 2188
MaeI	CTAG	7 cut(s)	143, 383, 674, 1181, 1665, 2220, 2303
MaeII	ACGT	2 cut(s)	911, 1694
MaeIII	GTNAC	4 cut(s)	145, 794, 907, 1082
MfeI	CAATTG	1 cut(s)	1076
MflI	RGATCY	5 cut(s)	166, 1258, 1636, 1889, 2255
MhlI	GDGCHC	1 cut(s)	1659
MlyI	GAGTC	6 cut(s)	791, 990, 1026, 1028, 1655, 1820
MmeI	TCCRAC	1 cut(s)	2102
Mph1103I	ATGCAT	1 cut(s)	1375
MroXI	GAANNNNTTC	5 cut(s)	216, 729, 828, 1530, 1736
MseI	TTAA	8 cut(s)	557, 653, 885, 1292, 1367, 1580, 1758, 1808
MslI	CAYNNNNRTG	2 cut(s)	468, 1627
MspCI	CTTAAG	3 cut(s)	652, 1579, 1807
MspI	CCGG	1 cut(s)	523
MspR9I	CCNGG	2 cut(s)	524, 689
MunI	CAATTG	1 cut(s)	1076
Mva1269I	GAATGC	1 cut(s)	188
MvaI	CCWGG	1 cut(s)	689
MvnI	CGCG	1 cut(s)	2213
MwoI	GCNNNNNNNGC	6 cut(s)	551, 877, 1124, 1309, 2042, 2213
NciI	CCSGG	1 cut(s)	524
NdeI	CATATG	1 cut(s)	1308
NlaIV	GGNNCC	2 cut(s)	258, 1881
NmuCI	GTSAC	3 cut(s)	794, 907, 1082
NsiI	ATGCAT	1 cut(s)	1375
NspI	RCATGY	1 cut(s)	964
NspV	TTCGAA	3 cut(s)	180, 1279, 2109
PctI	GAATGC	1 cut(s)	188
PdmI	GAANNNNTTC	5 cut(s)	216, 729, 828, 1530, 1736
PfeI	GAWTC	7 cut(s)	286, 535, 677, 1100, 1109, 1619, 1908
PflMI	CCANNNNNTGG	1 cut(s)	2045
PkrI	GCNGC	6 cut(s)	75, 1142, 1609, 2149, 2215, 2218
Ple19I	CGATCG	1 cut(s)	31
PleI	GAGTC	6 cut(s)	791, 989, 1025, 1028, 1655, 1820
PpsI	GAGTC	6 cut(s)	791, 989, 1025, 1028, 1655, 1820
PshBI	ATTAAT	1 cut(s)	885
Psp124BI	GAGCTC	1 cut(s)	1659
Psp6I	CCWGG	1 cut(s)	687
PspFI	CCCAGC	2 cut(s)	1491, 2045
PspGI	CCWGG	1 cut(s)	687
PspN4I	GGNNCC	2 cut(s)	258, 1881
PspPI	GGNCC	2 cut(s)	611, 2071
PstI	CTGCAG	2 cut(s)	75, 873
PstNI	CAGNNNCTG	2 cut(s)	274, 1823
PsuI	RGATCY	5 cut(s)	166, 1258, 1636, 1889, 2255
PvuI	CGATCG	1 cut(s)	31
RsaI	GTAC	4 cut(s)	47, 2025, 2125, 2232
RsaNI	GTAC	4 cut(s)	46, 2024, 2124, 2231
RseI	CAYNNNNRTG	2 cut(s)	468, 1627
SacI	GAGCTC	1 cut(s)	1659
SalI	GTCGAC	1 cut(s)	1163
SaqAI	TTAA	8 cut(s)	557, 653, 885, 1292, 1367, 1580, 1758, 1808
SatI	GCNGC	6 cut(s)	74, 1141, 1608, 2148, 2214, 2217
Sau96I	GGNCC	2 cut(s)	611, 2071
ScaI	AGTACT	2 cut(s)	47, 2232
SchI	GAGTC	6 cut(s)	791, 990, 1026, 1028, 1655, 1820
ScrFI	CCNGG	2 cut(s)	524, 689
SduI	GDGCHC	1 cut(s)	1659
SfaNI	GCATC	8 cut(s)	460, 1045, 1290, 1541, 1865, 2005, 2098, 2188
SfcI	CTRYAG	5 cut(s)	71, 125, 474, 869, 903
SfuI	TTCGAA	3 cut(s)	180, 1279, 2109
SinI	GGWCC	2 cut(s)	611, 2071
SmiMI	CAYNNNNRTG	2 cut(s)	468, 1627
SmlI	CTYRAG	6 cut(s)	406, 652, 1006, 1579, 1807, 2234
SmoI	CTYRAG	6 cut(s)	406, 652, 1006, 1579, 1807, 2234
SsiI	CCGC	3 cut(s)	1444, 2005, 2213
SspMI	CTAG	7 cut(s)	143, 383, 674, 1181, 1665, 2220, 2303
SstI	GAGCTC	1 cut(s)	1659
StyD4I	CCNGG	2 cut(s)	522, 687
TaaI	ACNGT	6 cut(s)	129, 925, 1227, 1729, 2023, 2300
TaiI	ACGT	2 cut(s)	914, 1697
TaqI	TCGA	9 cut(s)	27, 180, 756, 1164, 1279, 1659, 1906, 2014, 2109
TatI	WGTACW	2 cut(s)	45, 2230
TauI	GCSGC	1 cut(s)	2216
TfiI	GAWTC	7 cut(s)	286, 535, 677, 1100, 1109, 1619, 1908
Tru1I	TTAA	8 cut(s)	557, 653, 885, 1292, 1367, 1580, 1758, 1808
Tru9I	TTAA	8 cut(s)	557, 653, 885, 1292, 1367, 1580, 1758, 1808
TscAI	CASTG	7 cut(s)	177, 420, 1230, 1275, 1732, 1819, 1824
TseFI	GTSAC	3 cut(s)	794, 907, 1082
TseI	GCWGC	5 cut(s)	73, 1140, 1607, 2147, 2216
Tsp45I	GTSAC	3 cut(s)	794, 907, 1082
TspDTI	ATGAA	7 cut(s)	311, 452, 471, 659, 1253, 1602, 1729
TspGWI	ACGGA	3 cut(s)	539, 758, 2111
TspRI	CASTG	7 cut(s)	177, 420, 1230, 1275, 1732, 1819, 1824
Van91I	CCANNNNNTGG	1 cut(s)	2045
Vha464I	CTTAAG	3 cut(s)	652, 1579, 1807
VpaK11BI	GGWCC	2 cut(s)	611, 2071
VspI	ATTAAT	1 cut(s)	885
XagI	CCTNNNNNAGG	2 cut(s)	686, 1535
XapI	RAATTY	9 cut(s)	107, 212, 368, 509, 895, 1929, 2117, 2129, 2308
XbaI	TCTAGA	1 cut(s)	673
XceI	RCATGY	1 cut(s)	964
XcmI	CCANNNNNNNNNTGG	1 cut(s)	695
XmiI	GTMKAC	1 cut(s)	1164
XmnI	GAANNNNTTC	5 cut(s)	216, 729, 828, 1530, 1736
XspI	CTAG	7 cut(s)	143, 383, 674, 1181, 1665, 2220, 2303
ZrmI	AGTACT	2 cut(s)	47, 2232
Zsp2I	ATGCAT	1 cut(s)	1375

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.