RLG00000013954

rRNA-processing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000418
Physical Location & Seq
Forward (+)
44699672 .. 44702454
2783 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013954

Sequence Viewer

Length: 1470 bp
ATGGGTTGTCCGATCGGGTACAGGTTTCATCCCACTGATGAAGAACTTGTGGGTTACTTTCTCCAGCAAAGGGCCAGGATGGGCAATCAGTTCCACTCGAATGAGATCTCCGAGTATCCGGAGTTTTACGGCCAAGAAGAACCCTGGGTTGTTTGGGACAAGCACGGTGGTTCCAGCGTGGATGATGGAGAGCCTCTCTTTTTCTTCACCAAACGCAAGAAGTTGAACCCCAACGGCAAGCGTTTTGATCGCAAAGTAGGCTCCGGAACGTGGAGCGGCCAGTTTTCCAGACAGGTTGTTGCCGCCGATAGAGAGACCGGATGCCGTATCATCAATGGGATTAGGAGGGATTTTAGGTATGAGGGCGGATGTGATGCTCAACAAAACAACTCTTGGTTGATGCAAGAGTTCGAATTGTGTCCCACTGATGCCTTGGTCTTGTGCACCTTGAAGAAGAACCCACGAAAAGCTGCTCAGACCAATGGCAAGAAGAGGAAGATGATCAATTCCGAGAGTCGAGATGATCAGTTGTTGCAAGTTGTTAATGAAGAGCTCTATCCTGAGTTATATCTTGATAATGGGCCTCTGTTTTCTATGGAGGAACTTCTTGCACCAAGTCCTCCAAATGTTCCGGATCCTCTTCAACACTTGGAGTCGAATGAGTCTCAGTCTCAGGATCAATCATATGTCAGCACTAATGATCAATTTCAGGATCATTCATATGAAGACAATAGCTTCCTGAGTTTCCTATCCGCTGAATTTCAACAACAGTTAGGCGAAGACAACAACTTCAGCTTTGCCCTTTCTCATATCCTTGGTGCCCCTGTCACGCTATTCACTACCAAATGTGCCGTTGCTGAGTTGAAAATGCACGGTCCGAGCCTCGGTCCCTCCCATTCCGAGTCTCTTGAAGCTGCTAACAGCCTCATTACTGCAAGGTGTGATCATGAGGAAGCCATGAGTGCTGATGATTGCATCATGGATGTTATTGGCAAAGATAATGCCGAGCACTTCTTTGTTGCTACTCAGCAGGCGCCATCTGCTGCCCAGCGCCAGTTCGTCAAAACTTCTGAAGAACAACGCTTGCATATGACTGACTTGGAATATAAGATGTTGGAAAAGAGGGCAAAGAATCTGTTGGAAAAGGGTTCCTCTGATGAAGATGTTGGTTGTGGAGATCAGAACTTGGAAGTGCAGGCTGTTGAAAAGAAGCGCACTACTAGGAAAGAATTGGGTGTGAAAGATAAAGTTCAGTTTAAGAGAAAGAGGGCAAAGATCAATATTCCGATGCTTATGTATTCTTTTTCTTGCAAATTTGCAGGTCCAAACCCCCTTTCATGTAAGCCGAAAAAGACTTTGAAAAGACCAGATTCAAGGAAGGAAAAGAATGATGAAGATACCAGTATGAGGAGTAGAAAGAAGCGGAAGAGATCACGGAAAGGCAAAAACCCTGTGAAGGCAGATGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Fcf1

Protein Analysis

490

Amino Acids

55.64

Weight (kDa)

6.85

Isoelectric Point (pI)

46.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 4 - 139 7e-22 No apical meristem (NAM) protein
Fcf1 PF04900 271 - 345 2.9e-14 Fcf1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000418)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g25200 FvH4_5g34450 FvH4_6g05730 FvH4_6g05740 FvH4_7g06570
rosa_chinensis RchiOBHm_Chr1g0333911 RchiOBHm_Chr3g0454621 RchiOBHm_Chr3g0454651 RchiOBHm_Chr5g0045711 RchiOBHm_Chr5g0045741 RchiOBHm_Chr5g0045961 RchiOBHm_Chr5g0048841 RchiOBHm_Chr5g0048911 RchiOBHm_Chr6g0266631 RchiOBHm_Chr6g0266821 RchiOBHm_Chr7g0235081
rosa_laevigata RLG00000001184 RLG00000010084 RLG00000013949 RLG00000013954 RLG00000013958 RLG00000013962 RLG00000013991 RLG00000014031 RLG00000014041 RLG00000014077 RLG00000014088 RLG00000014094 RLG00000025427 RLG00000025429 RLG00000029394 RLG00000029510 RLG00000029526 RLG00000034372 RLG00000034376
rosa_multiflora Rmu_co8426689.1_g000001 Rmu_co8428107.1_g000001 Rmu_sc0000026.1_g000016 Rmu_sc0000115.1_g000020 Rmu_sc0001035.1_g000067 Rmu_sc0001035.1_g000078 Rmu_sc0001208.1_g000032 Rmu_sc0001208.1_g000034 Rmu_sc0001792.1_g000031 Rmu_sc0001792.1_g000034 Rmu_sc0002239.1_g000009 Rmu_sc0002722.1_g000010 Rmu_sc0003628.1_g000026 Rmu_sc0004304.1_g000006 Rmu_sc0006003.1_g000019 Rmu_sc0006413.1_g000005 Rmu_sc0006413.1_g000020 Rmu_sc0007177.1_g000007 Rmu_sc0020815.1_g000004
rosa_roxburghii Rroxscaffold_1G00033010 Rroxscaffold_3G00226320 Rroxscaffold_6G00424890 Rroxscaffold_6G00424920 Rroxscaffold_7G00195150
rosa_rugosa Rorug01G0112100 Rorug01G0112200 Rorug01G0119400 Rorug03G0000700 Rorug03G0000900 Rorug03G0211800 Rorug03G0211900 Rorug03G0212000 Rorug03G0212100 Rorug05G0224400 Rorug05G0232500 Rorug05G0232700 Rorug05G0573400 Rorug06G0025800 Rorug07G0143000 Rorug07G0143100
rosa_samantha Rh1AG136300 Rh1DG141400 Rh1DG146800 Rh3AG060600 Rh3AG060800 Rh6BG147300 Rh6BG148700 Rh6BG149100 Rh6BG160100 Rh6BG161000 Rh7AG442200
rosa_wichuraiana Rw0G021480 Rw1G011300 Rw3G004710 Rw3G004730 Rw3G025710 Rw5G028590 Rw5G028720 Rw5G028760 Rw5G030090 Rw5G030310 Rw5G030530 Rw7G036760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1310
AccB1I GGYRCC 2 cut(s) 818, 1033
AccBSI CCGCTC 1 cut(s) 276
AccIII TCCGGA 3 cut(s) 118, 263, 631
AciI CCGC 5 cut(s) 276, 303, 366, 753, 1423
AclWI GGATC 4 cut(s) 629, 642, 684, 720
AcoI YGGCCR 2 cut(s) 130, 277
AcsI RAATTY 2 cut(s) 758, 1313
AcuI CTGAAG 2 cut(s) 775, 1092
AcyI GRCGYC 1 cut(s) 1034
AfaI GTAC 1 cut(s) 20
AfiI CCNNNNNNNGG 5 cut(s) 70, 270, 884, 1407, 1456
AgsI TTSAA 9 cut(s) 226, 451, 644, 764, 865, 911, 1205, 1360, 1374
AjnI CCWGG 2 cut(s) 74, 143
AjuI GAANNNNNNNTTGG 2 cut(s) 1318, 1350
AluBI AGCT 5 cut(s) 470, 553, 735, 795, 914
AluI AGCT 5 cut(s) 470, 553, 735, 795, 914
Alw21I GWGCWC 3 cut(s) 446, 555, 1011
Alw26I GTCTC 4 cut(s) 308, 669, 675, 909
Alw44I GTGCAC 1 cut(s) 442
AlwI GGATC 4 cut(s) 629, 642, 684, 720
Aor13HI TCCGGA 3 cut(s) 118, 263, 631
AoxI GGCC 4 cut(s) 72, 130, 277, 581
ApaLI GTGCAC 1 cut(s) 442
ApeKI GCWGC 3 cut(s) 470, 914, 1043
ApoI RAATTY 2 cut(s) 758, 1313
AspLEI GCGC 3 cut(s) 1036, 1053, 1215
AspS9I GGNCC 5 cut(s) 72, 581, 875, 887, 1322
AsuHPI GGTGA 1 cut(s) 199
AsuII TTCGAA 1 cut(s) 411
AvaII GGWCC 3 cut(s) 875, 887, 1322
BaeGI GKGCMC 2 cut(s) 446, 823
BamHI GGATCC 1 cut(s) 634
BanI GGYRCC 2 cut(s) 818, 1033
BanII GRGCYC 1 cut(s) 555
BbsI GAAGAC 2 cut(s) 732, 786
Bbv12I GWGCWC 3 cut(s) 446, 555, 1011
BbvI GCAGC 3 cut(s) 457, 901, 1030
BccI CCATC 4 cut(s) 73, 179, 1045, 1457
BceAI ACGGC 4 cut(s) 145, 250, 309, 836
BciT130I CCWGG 2 cut(s) 76, 145
BciVI GTATCC 1 cut(s) 126
BclI TGATCA 4 cut(s) 501, 523, 700, 943
BcoDI GTCTC 4 cut(s) 308, 669, 675, 909
BfaI CTAG 1 cut(s) 1221
BfoI RGCGCY 2 cut(s) 1037, 1054
BfuAI ACCTGC 1 cut(s) 1310
BfuI GTATCC 1 cut(s) 126
BglII AGATCT 1 cut(s) 105
BisI GCNGC 5 cut(s) 277, 303, 471, 915, 1044
BlsI GCNGC 5 cut(s) 278, 304, 472, 916, 1045
Bme1390I CCNGG 2 cut(s) 76, 145
Bme18I GGWCC 3 cut(s) 875, 887, 1322
BmgT120I GGNCC 5 cut(s) 72, 581, 875, 887, 1322
BmiI GGNNCC 7 cut(s) 172, 262, 636, 820, 889, 1035, 1150
BmrFI CCNGG 2 cut(s) 76, 145
BmsI GCATC 6 cut(s) 311, 364, 390, 418, 984, 1278
BpiI GAAGAC 2 cut(s) 732, 786
BplI GAGNNNNNCTC 2 cut(s) 180, 212
BpmI CTGGAG 1 cut(s) 47
Bpu14I TTCGAA 1 cut(s) 411
BsaHI GRCGYC 1 cut(s) 1034
BsaI GGTCTC 1 cut(s) 308
BsaJI CCNNGG 5 cut(s) 143, 144, 432, 814, 883
BsaWI WCCGGW 4 cut(s) 118, 263, 317, 631
Bsc4I CCNNNNNNNGG 5 cut(s) 70, 270, 884, 1407, 1456
Bse1I ACTGG 3 cut(s) 280, 1054, 1401
BseAI TCCGGA 3 cut(s) 118, 263, 631
BseBI CCWGG 2 cut(s) 76, 145
BseDI CCNNGG 5 cut(s) 143, 144, 432, 814, 883
BseGI GGATG 6 cut(s) 28, 84, 187, 326, 374, 988
BseLI CCNNNNNNNGG 5 cut(s) 70, 270, 884, 1407, 1456
BseMII CTCAG 7 cut(s) 488, 552, 680, 686, 731, 849, 1040
BseNI ACTGG 3 cut(s) 280, 1054, 1401
BseRI GAGGAG 1 cut(s) 1423
BseSI GKGCMC 2 cut(s) 446, 823
BseXI GCAGC 3 cut(s) 457, 901, 1030
BseYI CCCAGC 1 cut(s) 1047
BsgI GTGCAG 1 cut(s) 1214
Bsh1285I CGRYCG 1 cut(s) 15
BshFI GGCC 4 cut(s) 74, 132, 279, 583
BshNI GGYRCC 2 cut(s) 818, 1033
BsiEI CGRYCG 1 cut(s) 15
BsiHKAI GWGCWC 3 cut(s) 446, 555, 1011
BsiSI CCGG 4 cut(s) 119, 264, 318, 632
BslFI GGGAC 3 cut(s) 170, 405, 873
BslI CCNNNNNNNGG 5 cut(s) 70, 270, 884, 1407, 1456
BsmAI GTCTC 4 cut(s) 308, 669, 675, 909
BsmFI GGGAC 3 cut(s) 170, 405, 873
BsnI GGCC 4 cut(s) 74, 132, 279, 583
Bso31I GGTCTC 1 cut(s) 308
Bsp119I TTCGAA 1 cut(s) 411
Bsp1286I GDGCHC 4 cut(s) 446, 555, 823, 1011
Bsp13I TCCGGA 3 cut(s) 118, 263, 631
BspACI CCGC 5 cut(s) 276, 303, 366, 753, 1423
BspANI GGCC 4 cut(s) 74, 132, 279, 583
BspCNI CTCAG 7 cut(s) 487, 553, 679, 685, 732, 850, 1039
BspEI TCCGGA 3 cut(s) 118, 263, 631
BspHI TCATGA 1 cut(s) 946
BspLI GGNNCC 7 cut(s) 172, 262, 636, 820, 889, 1035, 1150
BspMI ACCTGC 1 cut(s) 1310
BspPI GGATC 4 cut(s) 629, 642, 684, 720
BspQI GCTCTTC 1 cut(s) 543
BspT104I TTCGAA 1 cut(s) 411
BspT107I GGYRCC 2 cut(s) 818, 1033
BspTNI GGTCTC 1 cut(s) 308
BsrBI CCGCTC 1 cut(s) 276
BsrI ACTGG 3 cut(s) 280, 1054, 1401
BssECI CCNNGG 5 cut(s) 143, 144, 432, 814, 883
BssNI GRCGYC 1 cut(s) 1034
BssT1I CCWWGG 2 cut(s) 432, 814
Bst2UI CCWGG 2 cut(s) 76, 145
Bst4CI ACNGT 3 cut(s) 167, 771, 875
Bst6I CTCTTC 4 cut(s) 485, 543, 645, 1421
BstACI GRCGYC 1 cut(s) 1034
BstBI TTCGAA 1 cut(s) 411
BstC8I GCNNGC 4 cut(s) 239, 1032, 1085, 1197
BstDEI CTNAG 7 cut(s) 474, 561, 666, 672, 740, 858, 1026
BstF5I GGATG 6 cut(s) 28, 84, 187, 326, 374, 988
BstH2I RGCGCY 2 cut(s) 1037, 1054
BstHHI GCGC 3 cut(s) 1036, 1053, 1215
BstMAI GTCTC 4 cut(s) 308, 669, 675, 909
BstMCI CGRYCG 1 cut(s) 15
BstMWI GCNNNNNNNGC 3 cut(s) 258, 962, 1040
BstNI CCWGG 2 cut(s) 76, 145
BstSCI CCNGG 2 cut(s) 74, 143
BstSLI GKGCMC 2 cut(s) 446, 823
BstV1I GCAGC 3 cut(s) 457, 901, 1030
BstV2I GAAGAC 2 cut(s) 732, 786
BstX2I RGATCY 2 cut(s) 105, 634
BstYI RGATCY 2 cut(s) 105, 634
BsuI GTATCC 1 cut(s) 126
BsuRI GGCC 4 cut(s) 74, 132, 279, 583
BtsCI GGATG 6 cut(s) 28, 84, 187, 326, 374, 988
BtsIMutI CAGTG 2 cut(s) 33, 423
BveI ACCTGC 1 cut(s) 1310
Cac8I GCNNGC 4 cut(s) 239, 1032, 1085, 1197
CciI TCATGA 1 cut(s) 946
CfoI GCGC 3 cut(s) 1036, 1053, 1215
Cfr13I GGNCC 5 cut(s) 72, 581, 875, 887, 1322
CpoI CGGWCCG 1 cut(s) 875
Csp6I GTAC 1 cut(s) 19
CspCI CAANNNNNGTGG 2 cut(s) 148, 183
CspI CGGWCCG 1 cut(s) 875
CviAII CATG 4 cut(s) 947, 958, 979, 1338
CviQI GTAC 1 cut(s) 19
DdeI CTNAG 7 cut(s) 474, 561, 666, 672, 740, 858, 1026
DinI GGCGCC 1 cut(s) 1035
EaeI YGGCCR 2 cut(s) 130, 277
Eam1104I CTCTTC 4 cut(s) 485, 543, 645, 1421
EarI CTCTTC 4 cut(s) 485, 543, 645, 1421
EciI GGCGGA 1 cut(s) 381
Ecl136II GAGCTC 1 cut(s) 553
Eco130I CCWWGG 2 cut(s) 432, 814
Eco24I GRGCYC 1 cut(s) 555
Eco31I GGTCTC 1 cut(s) 308
Eco47I GGWCC 3 cut(s) 875, 887, 1322
Eco53kI GAGCTC 1 cut(s) 553
Eco57I CTGAAG 2 cut(s) 775, 1092
EcoICRI GAGCTC 1 cut(s) 553
EcoRII CCWGG 2 cut(s) 74, 143
EcoT14I CCWWGG 2 cut(s) 432, 814
EcoT38I GRGCYC 1 cut(s) 555
EgeI GGCGCC 1 cut(s) 1035
EheI GGCGCC 1 cut(s) 1035
ErhI CCWWGG 2 cut(s) 432, 814
FaeI CATG 4 cut(s) 950, 961, 982, 1341
FaqI GGGAC 3 cut(s) 170, 405, 873
FatI CATG 4 cut(s) 946, 957, 978, 1337
FauNDI CATATG 3 cut(s) 685, 721, 1089
FbaI TGATCA 4 cut(s) 501, 523, 700, 943
Fnu4HI GCNGC 5 cut(s) 277, 303, 471, 915, 1044
FokI GGATG 6 cut(s) 15, 91, 194, 333, 381, 995
FriOI GRGCYC 1 cut(s) 555
Fsp4HI GCNGC 5 cut(s) 277, 303, 471, 915, 1044
FspBI CTAG 1 cut(s) 1221
GlaI GCGC 3 cut(s) 1035, 1052, 1214
GluI GCNGC 5 cut(s) 277, 303, 471, 915, 1044
GsaI CCCAGC 1 cut(s) 1051
GsuI CTGGAG 1 cut(s) 47
HaeII RGCGCY 2 cut(s) 1037, 1054
HaeIII GGCC 4 cut(s) 74, 132, 279, 583
HapII CCGG 4 cut(s) 119, 264, 318, 632
HhaI GCGC 3 cut(s) 1036, 1053, 1215
Hin1I GRCGYC 1 cut(s) 1034
Hin1II CATG 4 cut(s) 950, 961, 982, 1341
Hin6I GCGC 3 cut(s) 1034, 1051, 1213
HinP1I GCGC 3 cut(s) 1034, 1051, 1213
HinfI GANTC 6 cut(s) 514, 653, 662, 902, 1132, 1370
HpaII CCGG 4 cut(s) 119, 264, 318, 632
HphI GGTGA 1 cut(s) 199
Hpy166II GTNNAC 1 cut(s) 444
Hpy8I GTNNAC 1 cut(s) 444
HpyAV CCTTC 2 cut(s) 1372, 1450
HpyCH4III ACNGT 3 cut(s) 167, 771, 875
HpyCH4IV ACGT 1 cut(s) 269
HpyF10VI GCNNNNNNNGC 3 cut(s) 258, 962, 1040
HpyF3I CTNAG 7 cut(s) 474, 561, 666, 672, 740, 858, 1026
HpySE526I ACGT 1 cut(s) 269
Hsp92I GRCGYC 1 cut(s) 1034
Hsp92II CATG 4 cut(s) 950, 961, 982, 1341
HspAI GCGC 3 cut(s) 1034, 1051, 1213
KasI GGCGCC 1 cut(s) 1033
Kpn2I TCCGGA 3 cut(s) 118, 263, 631
Ksp22I TGATCA 4 cut(s) 501, 523, 700, 943
LguI GCTCTTC 1 cut(s) 543
LmnI GCTCC 2 cut(s) 266, 273
Lsp1109I GCAGC 3 cut(s) 457, 901, 1030
LweI GCATC 6 cut(s) 311, 364, 390, 418, 984, 1278
MaeI CTAG 1 cut(s) 1221
MaeII ACGT 1 cut(s) 269
MaeIII GTNAC 2 cut(s) 53, 826
MbiI CCGCTC 1 cut(s) 276
MflI RGATCY 2 cut(s) 105, 634
MhlI GDGCHC 4 cut(s) 446, 555, 823, 1011
MluCI AATT 6 cut(s) 413, 505, 704, 758, 1229, 1313
Mly113I GGCGCC 1 cut(s) 1034
MlyI GAGTC 4 cut(s) 523, 662, 671, 911
MmeI TCCRAC 2 cut(s) 1095, 1119
MroI TCCGGA 3 cut(s) 118, 263, 631
MseI TTAA 3 cut(s) 543, 1257, 1468
MslI CAYNNNNRTG 2 cut(s) 99, 720
MspA1I CMGCKG 1 cut(s) 755
MspI CCGG 4 cut(s) 119, 264, 318, 632
MspR9I CCNGG 2 cut(s) 76, 145
MvaI CCWGG 2 cut(s) 76, 145
MwoI GCNNNNNNNGC 3 cut(s) 258, 962, 1040
NarI GGCGCC 1 cut(s) 1034
NdeI CATATG 3 cut(s) 685, 721, 1089
NlaIII CATG 4 cut(s) 950, 961, 982, 1341
NlaIV GGNNCC 7 cut(s) 172, 262, 636, 820, 889, 1035, 1150
NmeAIII GCCGAG 1 cut(s) 1030
NmuCI GTSAC 1 cut(s) 826
NspV TTCGAA 1 cut(s) 411
PagI TCATGA 1 cut(s) 946
PasI CCCWGGG 1 cut(s) 144
PciSI GCTCTTC 1 cut(s) 543
PfeI GAWTC 2 cut(s) 1132, 1370
PkrI GCNGC 5 cut(s) 278, 304, 472, 916, 1045
Ple19I CGATCG 1 cut(s) 15
PleI GAGTC 4 cut(s) 522, 661, 670, 910
PluTI GGCGCC 1 cut(s) 1037
PpsI GAGTC 4 cut(s) 522, 661, 670, 910
Psp124BI GAGCTC 1 cut(s) 555
Psp6I CCWGG 2 cut(s) 74, 143
PspFI CCCAGC 1 cut(s) 1047
PspGI CCWGG 2 cut(s) 74, 143
PspN4I GGNNCC 7 cut(s) 172, 262, 636, 820, 889, 1035, 1150
PspPI GGNCC 5 cut(s) 72, 581, 875, 887, 1322
PsuI RGATCY 2 cut(s) 105, 634
PvuI CGATCG 1 cut(s) 15
RsaI GTAC 1 cut(s) 20
RsaNI GTAC 1 cut(s) 19
RseI CAYNNNNRTG 2 cut(s) 99, 720
Rsr2I CGGWCCG 1 cut(s) 875
RsrII CGGWCCG 1 cut(s) 875
SacI GAGCTC 1 cut(s) 555
SapI GCTCTTC 1 cut(s) 543
SaqAI TTAA 3 cut(s) 543, 1257, 1468
SatI GCNGC 5 cut(s) 277, 303, 471, 915, 1044
Sau96I GGNCC 5 cut(s) 72, 581, 875, 887, 1322
SchI GAGTC 4 cut(s) 523, 662, 671, 911
ScrFI CCNGG 2 cut(s) 76, 145
SduI GDGCHC 4 cut(s) 446, 555, 823, 1011
SfaNI GCATC 6 cut(s) 311, 364, 390, 418, 984, 1278
SfoI GGCGCC 1 cut(s) 1035
SfuI TTCGAA 1 cut(s) 411
SinI GGWCC 3 cut(s) 875, 887, 1322
SmiMI CAYNNNNRTG 2 cut(s) 99, 720
Sse9I AATT 6 cut(s) 413, 505, 704, 758, 1229, 1313
SsiI CCGC 5 cut(s) 276, 303, 366, 753, 1423
SspDI GGCGCC 1 cut(s) 1033
SspI AATATT 1 cut(s) 1282
SspMI CTAG 1 cut(s) 1221
SstI GAGCTC 1 cut(s) 555
StyD4I CCNGG 2 cut(s) 74, 143
StyI CCWWGG 2 cut(s) 432, 814
TaaI ACNGT 3 cut(s) 167, 771, 875
TaiI ACGT 1 cut(s) 272
TaqI TCGA 4 cut(s) 98, 411, 517, 656
TaqII GACCGA 1 cut(s) 875
TasI AATT 6 cut(s) 413, 505, 704, 758, 1229, 1313
TauI GCSGC 2 cut(s) 279, 305
TfiI GAWTC 2 cut(s) 1132, 1370
Tru1I TTAA 3 cut(s) 543, 1257, 1468
Tru9I TTAA 3 cut(s) 543, 1257, 1468
TscAI CASTG 2 cut(s) 40, 430
TseFI GTSAC 1 cut(s) 826
TseI GCWGC 3 cut(s) 470, 914, 1043
Tsp45I GTSAC 1 cut(s) 826
TspDTI ATGAA 8 cut(s) 17, 54, 561, 708, 738, 1173, 1326, 1407
TspGWI ACGGA 1 cut(s) 1450
TspRI CASTG 2 cut(s) 40, 430
VneI GTGCAC 1 cut(s) 442
VpaK11BI GGWCC 3 cut(s) 875, 887, 1322
XapI RAATTY 2 cut(s) 758, 1313
XcmI CCANNNNNNNNNTGG 1 cut(s) 430
XspI CTAG 1 cut(s) 1221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.