Rorug07G0143100
NAC Family

(NAC) domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000418
Physical Location & Seq
Reverse (-)
11296780 .. 11299013
2234 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0143100.1

Sequence Viewer

Length: 1410 bp
ATGGCAGCCGGCCACGTCGCCATTGTCCCAAGTCCAGGTTTAGGCCACCTCATTCCGCTCACCGAGCTGGCCAAACGACTCTTCGTCCACCACAACTTCACCGTCACCTTCTTCATCCCCAACGACGGCACGAACCTGACTCTGCAAAAGAAAATCCTGGAAGCTTTGCCGGAGACCATATCCTCCACCTTCCTCCCTCCCATCAACTTAGACGACGTCCCACCAGAATCGATGATCGAAACCAACATCGCTCTCACCTTGACTCGGTCACTCTCCGCTATCCGCGACTCAGCTAAGGCCCTAGCCAAGTCGACTCGGCTGGTGGCGCTTGTTGTTGATGTCTTTGGTCTTGAGGCCTTTGATGTGGCCAATGAGCTCAATTTGCTGCCCTATCTTTTCTTTCCTTCTACGGCGATGGGTTTGTGGCTTGTGTTTGAGTTGCCAAAGCTTGACGAGACTACTACTTGTGAGTACAGGGATCTGCCTGAACCGGTCCGGCTTCCGGGTTGTGTGCTGCTACATGGCAGAGATTTTGTAGAAATTCTGAAAGATAGGAGCAATGTGGCGTATAAAGCTTTTCTTCGCATCGGCAAGAGGTACAAGTCCGCAGCTGGGATCATGATCAATAGCTTTGCGGATGTGGAACCGGGTGCTTTCAAGGCTTTCAAGGAACACAGACAAAGTCATGGTCTTCCACCGGTTTACCCCATCGGACCGGTGATAAAAACCGGTTCGGCTTCCGGATTGGGTGAGAATGAGTGCTTGAGCTGGTTGGATGATCAGCCAATTGGGTCGGTGTTGTTTGTTTCGTTTGGAAGCTGTGGAACCCTCACAAGCGAGCAGATGAATGAGTTGGCTTTAGGGCTTGAAATGAGTGGTGTGAGATTTCTTTGGGTTACTAGGAGTCCAAATGAGACATCAAAAGATGCAGCTTTCTTTGGTGTTCAAAGTTCGACCGATCCTTTAAGTTTTCTACCCCAAGGTTTTTGCGAGAGAACCAAAGAGGTAGGTTTAGTTGTTACTTCTTGGGCTCCTCAGGTCCAAATTCTAAGCCATGGGTCGACGGGCGGGTTTTTGACCCATTGCGGGTGGAACTCAACCGTAGAGAGCATTGTGCATGGTGTGCCTTTGATTGCTTGGCCACTCTATGCCGAACAGAAGATGAATTCTGTGTTACTTGCTGAAGATTTGAAGGTCGCATGGAGGGTCAAGGTGAACGATAAGGGTATAGTGGAGCGTGAAGAAATTGCTAAGTACGCAAAGGATCTAATTGAAGGAGACGAAGGGAAATTGCTCAAGAAGAAGATGATAGAGCTGAAAGAGGCATCCCAAGTGGCTTTGAGCCAAGATGGTTCGTCTACAAAATCACTTGCAGAGGTTGCTCAGATATGGAAAGGCCACAAGAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

469

Amino Acids

51.37

Weight (kDa)

5.83

Isoelectric Point (pI)

42.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 266 - 394 1.3e-19 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000418)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g25200 FvH4_5g34450 FvH4_6g05730 FvH4_6g05740 FvH4_7g06570
rosa_chinensis RchiOBHm_Chr1g0333911 RchiOBHm_Chr3g0454621 RchiOBHm_Chr3g0454651 RchiOBHm_Chr5g0045711 RchiOBHm_Chr5g0045741 RchiOBHm_Chr5g0045961 RchiOBHm_Chr5g0048841 RchiOBHm_Chr5g0048911 RchiOBHm_Chr6g0266631 RchiOBHm_Chr6g0266821 RchiOBHm_Chr7g0235081
rosa_laevigata RLG00000001184 RLG00000010084 RLG00000013949 RLG00000013954 RLG00000013958 RLG00000013962 RLG00000013991 RLG00000014031 RLG00000014041 RLG00000014077 RLG00000014088 RLG00000014094 RLG00000025427 RLG00000025429 RLG00000029394 RLG00000029510 RLG00000029526 RLG00000034372 RLG00000034376
rosa_multiflora Rmu_co8426689.1_g000001 Rmu_co8428107.1_g000001 Rmu_sc0000026.1_g000016 Rmu_sc0000115.1_g000020 Rmu_sc0001035.1_g000067 Rmu_sc0001035.1_g000078 Rmu_sc0001208.1_g000032 Rmu_sc0001208.1_g000034 Rmu_sc0001792.1_g000031 Rmu_sc0001792.1_g000034 Rmu_sc0002239.1_g000009 Rmu_sc0002722.1_g000010 Rmu_sc0003628.1_g000026 Rmu_sc0004304.1_g000006 Rmu_sc0006003.1_g000019 Rmu_sc0006413.1_g000005 Rmu_sc0006413.1_g000020 Rmu_sc0007177.1_g000007 Rmu_sc0020815.1_g000004
rosa_roxburghii Rroxscaffold_1G00033010 Rroxscaffold_3G00226320 Rroxscaffold_6G00424890 Rroxscaffold_6G00424920 Rroxscaffold_7G00195150
rosa_rugosa Rorug01G0112100 Rorug01G0112200 Rorug01G0119400 Rorug03G0000700 Rorug03G0000900 Rorug03G0211800 Rorug03G0211900 Rorug03G0212000 Rorug03G0212100 Rorug05G0224400 Rorug05G0232500 Rorug05G0232700 Rorug05G0573400 Rorug06G0025800 Rorug07G0143000 Rorug07G0143100
rosa_samantha Rh1AG136300 Rh1DG141400 Rh1DG146800 Rh3AG060600 Rh3AG060800 Rh6BG147300 Rh6BG148700 Rh6BG149100 Rh6BG160100 Rh6BG161000 Rh7AG442200
rosa_wichuraiana Rw0G021480 Rw1G011300 Rw3G004710 Rw3G004730 Rw3G025710 Rw5G028590 Rw5G028720 Rw5G028760 Rw5G030090 Rw5G030310 Rw5G030530 Rw7G036760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 219
AccBSI CCGCTC 1 cut(s) 58
AccI GTMKAC 3 cut(s) 311, 1061, 1358
AccII CGCG 1 cut(s) 285
AccIII TCCGGA 1 cut(s) 740
AciI CCGC 7 cut(s) 56, 276, 283, 606, 635, 1068, 1086
AclWI GGATC 4 cut(s) 486, 623, 953, 1272
AcoI YGGCCR 4 cut(s) 10, 69, 366, 1139
AcsI RAATTY 3 cut(s) 540, 1044, 1165
AcuI CTGAAG 1 cut(s) 1203
AcyI GRCGYC 1 cut(s) 216
AfaI GTAC 3 cut(s) 473, 599, 1256
AfiI CCNNNNNNNGG 7 cut(s) 35, 41, 125, 264, 502, 612, 1086
AgeI ACCGGT 4 cut(s) 490, 697, 715, 728
AgsI TTSAA 6 cut(s) 658, 667, 869, 947, 1192, 1274
AhdI GACNNNNNGTC 1 cut(s) 83
AjiI CACGTC 1 cut(s) 16
AjnI CCWGG 2 cut(s) 34, 156
AjuI GAANNNNNNNTTGG 2 cut(s) 65, 97
Alw21I GWGCWC 1 cut(s) 378
Alw26I GTCTC 4 cut(s) 167, 449, 908, 1272
AlwI GGATC 4 cut(s) 486, 623, 953, 1272
Aor13HI TCCGGA 1 cut(s) 740
AoxI GGCC 8 cut(s) 10, 43, 69, 297, 354, 366, 1139, 1396
ApeKI GCWGC 5 cut(s) 5, 385, 514, 608, 929
ApoI RAATTY 3 cut(s) 540, 1044, 1165
ArsI GACNNNNNNTTYG 2 cut(s) 673, 705
AsiGI ACCGGT 4 cut(s) 490, 697, 715, 728
AspLEI GCGC 1 cut(s) 328
AspS9I GGNCC 4 cut(s) 298, 493, 713, 1039
AsuC2I CCSGG 2 cut(s) 504, 648
AsuHPI GGTGA 7 cut(s) 52, 91, 97, 247, 730, 761, 1225
AvaII GGWCC 3 cut(s) 493, 713, 1039
AxyI CCTNAGG 1 cut(s) 1035
BalI TGGCCA 3 cut(s) 71, 368, 1141
BanII GRGCYC 2 cut(s) 378, 1033
BbsI GAAGAC 1 cut(s) 683
Bbv12I GWGCWC 1 cut(s) 378
BbvI GCAGC 5 cut(s) 17, 372, 501, 620, 941
BccI CCATC 4 cut(s) 209, 409, 716, 1343
BceAI ACGGC 2 cut(s) 142, 426
BciT130I CCWGG 2 cut(s) 36, 158
BclI TGATCA 2 cut(s) 621, 778
BcnI CCSGG 2 cut(s) 504, 648
BcoDI GTCTC 4 cut(s) 167, 449, 908, 1272
BfaI CTAG 2 cut(s) 302, 900
BfoI RGCGCY 1 cut(s) 329
BisI GCNGC 5 cut(s) 6, 386, 515, 609, 930
BlsI GCNGC 5 cut(s) 7, 387, 516, 610, 931
Bme1390I CCNGG 4 cut(s) 36, 158, 504, 648
Bme18I GGWCC 3 cut(s) 493, 713, 1039
BmeRI GACNNNNNGTC 1 cut(s) 83
BmgBI CACGTC 1 cut(s) 16
BmgT120I GGNCC 4 cut(s) 298, 493, 713, 1039
BmiI GGNNCC 3 cut(s) 645, 826, 1032
BmrFI CCNGG 4 cut(s) 36, 158, 504, 648
BmsI GCATC 3 cut(s) 594, 916, 1334
BpiI GAAGAC 1 cut(s) 683
Bpu10I CCTNAGC 1 cut(s) 294
BpuEI CTTGAG 3 cut(s) 371, 784, 1280
BpuMI CCSGG 2 cut(s) 504, 648
Bsa29I ATCGAT 1 cut(s) 230
BsaBI GATNNNNATC 1 cut(s) 620
BsaHI GRCGYC 1 cut(s) 216
BsaI GGTCTC 1 cut(s) 167
BsaJI CCNNGG 2 cut(s) 979, 1054
BsaWI WCCGGW 5 cut(s) 490, 697, 715, 728, 740
Bsc4I CCNNNNNNNGG 7 cut(s) 35, 41, 125, 264, 502, 612, 1086
Bse118I RCCGGY 5 cut(s) 8, 490, 697, 715, 728
Bse21I CCTNAGG 1 cut(s) 1035
Bse3DI GCAATG 2 cut(s) 565, 1081
Bse8I GATNNNNATC 1 cut(s) 620
BseAI TCCGGA 1 cut(s) 740
BseBI CCWGG 2 cut(s) 36, 158
BseCI ATCGAT 1 cut(s) 230
BseDI CCNNGG 2 cut(s) 979, 1054
BseGI GGATG 4 cut(s) 114, 643, 781, 1325
BseJI GATNNNNATC 1 cut(s) 620
BseLI CCNNNNNNNGG 7 cut(s) 35, 41, 125, 264, 502, 612, 1086
BseMI GCAATG 2 cut(s) 565, 1081
BseMII CTCAG 3 cut(s) 303, 1049, 1397
BseRI GAGGAG 1 cut(s) 1023
BseXI GCAGC 5 cut(s) 17, 372, 501, 620, 941
BseYI CCCAGC 1 cut(s) 611
Bsh1236I CGCG 1 cut(s) 285
Bsh1285I CGRYCG 1 cut(s) 957
BshFI GGCC 8 cut(s) 12, 45, 71, 299, 356, 368, 1141, 1398
BshTI ACCGGT 4 cut(s) 490, 697, 715, 728
BshVI ATCGAT 1 cut(s) 230
BsiEI CGRYCG 1 cut(s) 957
BsiHKAI GWGCWC 1 cut(s) 378
BslFI GGGAC 2 cut(s) 11, 203
BslI CCNNNNNNNGG 7 cut(s) 35, 41, 125, 264, 502, 612, 1086
BsmAI GTCTC 4 cut(s) 167, 449, 908, 1272
BsmBI CGTCTC 1 cut(s) 1272
BsmFI GGGAC 2 cut(s) 11, 203
BsnI GGCC 8 cut(s) 12, 45, 71, 299, 356, 368, 1141, 1398
Bso31I GGTCTC 1 cut(s) 167
Bsp1286I GDGCHC 2 cut(s) 378, 1033
Bsp13I TCCGGA 1 cut(s) 740
Bsp143I GATC 7 cut(s) 234, 478, 615, 621, 778, 958, 1264
Bsp19I CCATGG 1 cut(s) 1054
BspACI CCGC 7 cut(s) 56, 276, 283, 606, 635, 1068, 1086
BspANI GGCC 8 cut(s) 12, 45, 71, 299, 356, 368, 1141, 1398
BspCNI CTCAG 3 cut(s) 302, 1048, 1396
BspDI ATCGAT 1 cut(s) 230
BspEI TCCGGA 1 cut(s) 740
BspFNI CGCG 1 cut(s) 285
BspHI TCATGA 1 cut(s) 618
BspLI GGNNCC 3 cut(s) 645, 826, 1032
BspPI GGATC 4 cut(s) 486, 623, 953, 1272
BspTNI GGTCTC 1 cut(s) 167
BsrBI CCGCTC 1 cut(s) 58
BsrDI GCAATG 2 cut(s) 565, 1081
BsrFI RCCGGY 5 cut(s) 8, 490, 697, 715, 728
BssAI RCCGGY 5 cut(s) 8, 490, 697, 715, 728
BssECI CCNNGG 2 cut(s) 979, 1054
BssMI GATC 7 cut(s) 234, 478, 615, 621, 778, 958, 1264
BssNI GRCGYC 1 cut(s) 216
BssT1I CCWWGG 2 cut(s) 979, 1054
Bst2UI CCWGG 2 cut(s) 36, 158
Bst4CI ACNGT 2 cut(s) 103, 1102
Bst6I CTCTTC 1 cut(s) 86
BstACI GRCGYC 1 cut(s) 216
BstAPI GCANNNNNTGC 2 cut(s) 1123, 1379
BstC8I GCNNGC 3 cut(s) 10, 69, 839
BstDEI CTNAG 7 cut(s) 208, 289, 294, 1035, 1049, 1251, 1383
BstDSI CCRYGG 1 cut(s) 1054
BstF5I GGATG 4 cut(s) 114, 643, 781, 1325
BstFNI CGCG 1 cut(s) 285
BstH2I RGCGCY 1 cut(s) 329
BstHHI GCGC 1 cut(s) 328
BstKTI GATC 7 cut(s) 237, 481, 618, 624, 781, 961, 1267
BstMAI GTCTC 4 cut(s) 167, 449, 908, 1272
BstMBI GATC 7 cut(s) 234, 478, 615, 621, 778, 958, 1264
BstMCI CGRYCG 1 cut(s) 957
BstMWI GCNNNNNNNGC 8 cut(s) 64, 325, 382, 572, 659, 1123, 1256, 1379
BstNI CCWGG 2 cut(s) 36, 158
BstSCI CCNGG 4 cut(s) 34, 156, 502, 646
BstUI CGCG 1 cut(s) 285
BstV1I GCAGC 5 cut(s) 17, 372, 501, 620, 941
BstV2I GAAGAC 1 cut(s) 683
BstX2I RGATCY 2 cut(s) 478, 1264
BstYI RGATCY 2 cut(s) 478, 1264
Bsu15I ATCGAT 1 cut(s) 230
Bsu36I CCTNAGG 1 cut(s) 1035
BsuRI GGCC 8 cut(s) 12, 45, 71, 299, 356, 368, 1141, 1398
BsuTUI ATCGAT 1 cut(s) 230
BtgI CCRYGG 1 cut(s) 1054
BtgZI GCGATG 2 cut(s) 232, 428
BtrI CACGTC 1 cut(s) 16
BtsCI GGATG 4 cut(s) 114, 643, 781, 1325
Cac8I GCNNGC 3 cut(s) 10, 69, 839
CciI TCATGA 1 cut(s) 618
CfoI GCGC 1 cut(s) 328
Cfr10I RCCGGY 5 cut(s) 8, 490, 697, 715, 728
Cfr13I GGNCC 4 cut(s) 298, 493, 713, 1039
ClaI ATCGAT 1 cut(s) 230
CpoI CGGWCCG 2 cut(s) 493, 713
Csp6I GTAC 3 cut(s) 472, 598, 1255
CspAI ACCGGT 4 cut(s) 490, 697, 715, 728
CspI CGGWCCG 2 cut(s) 493, 713
CviAII CATG 6 cut(s) 521, 619, 686, 1055, 1118, 1200
CviQI GTAC 3 cut(s) 472, 598, 1255
DdeI CTNAG 7 cut(s) 208, 289, 294, 1035, 1049, 1251, 1383
DpnI GATC 7 cut(s) 236, 480, 617, 623, 780, 960, 1266
DpnII GATC 7 cut(s) 234, 478, 615, 621, 778, 958, 1264
DriI GACNNNNNGTC 1 cut(s) 83
EaeI YGGCCR 4 cut(s) 10, 69, 366, 1139
Eam1104I CTCTTC 1 cut(s) 86
Eam1105I GACNNNNNGTC 1 cut(s) 83
EarI CTCTTC 1 cut(s) 86
Ecl136II GAGCTC 1 cut(s) 376
Eco130I CCWWGG 2 cut(s) 979, 1054
Eco147I AGGCCT 1 cut(s) 356
Eco24I GRGCYC 2 cut(s) 378, 1033
Eco31I GGTCTC 1 cut(s) 167
Eco47I GGWCC 3 cut(s) 493, 713, 1039
Eco53kI GAGCTC 1 cut(s) 376
Eco57I CTGAAG 1 cut(s) 1203
Eco81I CCTNAGG 1 cut(s) 1035
EcoICRI GAGCTC 1 cut(s) 376
EcoO109I RGGNCCY 1 cut(s) 298
EcoRI GAATTC 1 cut(s) 1165
EcoRII CCWGG 2 cut(s) 34, 156
EcoT14I CCWWGG 2 cut(s) 979, 1054
EcoT38I GRGCYC 2 cut(s) 378, 1033
ErhI CCWWGG 2 cut(s) 979, 1054
Esp3I CGTCTC 1 cut(s) 1272
FaeI CATG 6 cut(s) 524, 622, 689, 1058, 1121, 1203
FalI AAGNNNNNCTT 2 cut(s) 564, 596
FaqI GGGAC 2 cut(s) 11, 203
FatI CATG 6 cut(s) 520, 618, 685, 1054, 1117, 1199
FauI CCCGC 2 cut(s) 1061, 1079
FbaI TGATCA 2 cut(s) 621, 778
FblI GTMKAC 3 cut(s) 311, 1061, 1358
Fnu4HI GCNGC 5 cut(s) 6, 386, 515, 609, 930
FokI GGATG 4 cut(s) 101, 650, 788, 1312
FriOI GRGCYC 2 cut(s) 378, 1033
Fsp4HI GCNGC 5 cut(s) 6, 386, 515, 609, 930
FspBI CTAG 2 cut(s) 302, 900
GlaI GCGC 1 cut(s) 327
GluI GCNGC 5 cut(s) 6, 386, 515, 609, 930
GsaI CCCAGC 1 cut(s) 615
HaeII RGCGCY 1 cut(s) 329
HaeIII GGCC 8 cut(s) 12, 45, 71, 299, 356, 368, 1141, 1398
HhaI GCGC 1 cut(s) 328
Hin1I GRCGYC 1 cut(s) 216
Hin1II CATG 6 cut(s) 524, 622, 689, 1058, 1121, 1203
Hin6I GCGC 1 cut(s) 326
HinP1I GCGC 1 cut(s) 326
HincII GTYRAC 2 cut(s) 312, 1062
HindII GTYRAC 2 cut(s) 312, 1062
HindIII AAGCTT 3 cut(s) 162, 446, 573
HinfI GANTC 7 cut(s) 78, 139, 227, 262, 287, 313, 904
HphI GGTGA 7 cut(s) 52, 91, 97, 247, 730, 761, 1225
Hpy166II GTNNAC 6 cut(s) 88, 312, 703, 1062, 1216, 1359
Hpy188I TCNGA 3 cut(s) 546, 713, 1386
Hpy188III TCNNGA 4 cut(s) 350, 619, 741, 1297
Hpy8I GTNNAC 6 cut(s) 88, 312, 703, 1062, 1216, 1359
Hpy99I CGWCG 4 cut(s) 20, 128, 218, 1066
HpyAV CCTTC 6 cut(s) 118, 199, 414, 1186, 1268, 1277
HpyCH4III ACNGT 2 cut(s) 103, 1102
HpyCH4IV ACGT 2 cut(s) 15, 216
HpyCH4V TGCA 4 cut(s) 145, 929, 1117, 1373
HpyF10VI GCNNNNNNNGC 8 cut(s) 64, 325, 382, 572, 659, 1123, 1256, 1379
HpyF3I CTNAG 7 cut(s) 208, 289, 294, 1035, 1049, 1251, 1383
HpySE526I ACGT 2 cut(s) 15, 216
Hsp92I GRCGYC 1 cut(s) 216
Hsp92II CATG 6 cut(s) 524, 622, 689, 1058, 1121, 1203
HspAI GCGC 1 cut(s) 326
Kpn2I TCCGGA 1 cut(s) 740
KroI GCCGGC 1 cut(s) 8
KroNI GCCGGC 1 cut(s) 10
Ksp22I TGATCA 2 cut(s) 621, 778
Kzo9I GATC 7 cut(s) 234, 478, 615, 621, 778, 958, 1264
LmnI GCTCC 3 cut(s) 555, 1036, 1234
Lsp1109I GCAGC 5 cut(s) 17, 372, 501, 620, 941
LweI GCATC 3 cut(s) 594, 916, 1334
MaeI CTAG 2 cut(s) 302, 900
MaeII ACGT 2 cut(s) 15, 216
MaeIII GTNAC 5 cut(s) 103, 267, 895, 1018, 1173
MalI GATC 7 cut(s) 236, 480, 617, 623, 780, 960, 1266
MbiI CCGCTC 1 cut(s) 58
MboI GATC 7 cut(s) 234, 478, 615, 621, 778, 958, 1264
MboII GAAGA 9 cut(s) 73, 103, 572, 683, 1171, 1196, 1253, 1312, 1315
MfeI CAATTG 1 cut(s) 786
MflI RGATCY 2 cut(s) 478, 1264
MhlI GDGCHC 2 cut(s) 378, 1033
MlsI TGGCCA 3 cut(s) 71, 368, 1141
MluCI AATT 8 cut(s) 379, 540, 786, 1044, 1165, 1245, 1269, 1289
MluNI TGGCCA 3 cut(s) 71, 368, 1141
MlyI GAGTC 6 cut(s) 72, 133, 256, 281, 307, 913
MmeI TCCRAC 1 cut(s) 753
Mox20I TGGCCA 3 cut(s) 71, 368, 1141
MroI TCCGGA 1 cut(s) 740
MroNI GCCGGC 1 cut(s) 8
MscI TGGCCA 3 cut(s) 71, 368, 1141
MseI TTAA 1 cut(s) 965
Msp20I TGGCCA 3 cut(s) 71, 368, 1141
MspA1I CMGCKG 1 cut(s) 611
MspR9I CCNGG 4 cut(s) 36, 158, 504, 648
MunI CAATTG 1 cut(s) 786
MvaI CCWGG 2 cut(s) 36, 158
MvnI CGCG 1 cut(s) 285
MwoI GCNNNNNNNGC 8 cut(s) 64, 325, 382, 572, 659, 1123, 1256, 1379
NaeI GCCGGC 1 cut(s) 10
NciI CCSGG 2 cut(s) 504, 648
NcoI CCATGG 1 cut(s) 1054
NdeII GATC 7 cut(s) 234, 478, 615, 621, 778, 958, 1264
NgoMIV GCCGGC 1 cut(s) 8
NlaIII CATG 6 cut(s) 524, 622, 689, 1058, 1121, 1203
NlaIV GGNNCC 3 cut(s) 645, 826, 1032
NmeAIII GCCGAG 1 cut(s) 295
NmuCI GTSAC 2 cut(s) 103, 267
PagI TCATGA 1 cut(s) 618
PceI AGGCCT 1 cut(s) 356
PdiI GCCGGC 1 cut(s) 10
PfeI GAWTC 1 cut(s) 227
PflFI GACNNNGTC 3 cut(s) 215, 265, 681
PfoI TCCNGGA 1 cut(s) 156
PinAI ACCGGT 4 cut(s) 490, 697, 715, 728
PkrI GCNGC 5 cut(s) 7, 387, 516, 610, 931
PleI GAGTC 6 cut(s) 72, 133, 256, 281, 307, 912
PpsI GAGTC 6 cut(s) 72, 133, 256, 281, 307, 912
Psp124BI GAGCTC 1 cut(s) 378
Psp6I CCWGG 2 cut(s) 34, 156
PspFI CCCAGC 1 cut(s) 611
PspGI CCWGG 2 cut(s) 34, 156
PspN4I GGNNCC 3 cut(s) 645, 826, 1032
PspPI GGNCC 4 cut(s) 298, 493, 713, 1039
PsuI RGATCY 2 cut(s) 478, 1264
PsyI GACNNNGTC 3 cut(s) 215, 265, 681
PvuII CAGCTG 1 cut(s) 611
RsaI GTAC 3 cut(s) 473, 599, 1256
RsaNI GTAC 3 cut(s) 472, 598, 1255
Rsr2I CGGWCCG 2 cut(s) 493, 713
RsrII CGGWCCG 2 cut(s) 493, 713
SacI GAGCTC 1 cut(s) 378
SalI GTCGAC 2 cut(s) 310, 1060
SaqAI TTAA 1 cut(s) 965
SatI GCNGC 5 cut(s) 6, 386, 515, 609, 930
Sau3AI GATC 7 cut(s) 234, 478, 615, 621, 778, 958, 1264
Sau96I GGNCC 4 cut(s) 298, 493, 713, 1039
SchI GAGTC 6 cut(s) 72, 133, 256, 281, 307, 913
ScrFI CCNGG 4 cut(s) 36, 158, 504, 648
SduI GDGCHC 2 cut(s) 378, 1033
SfaNI GCATC 3 cut(s) 594, 916, 1334
SinI GGWCC 3 cut(s) 493, 713, 1039
SmlI CTYRAG 3 cut(s) 350, 763, 1295
SmoI CTYRAG 3 cut(s) 350, 763, 1295
Sse9I AATT 8 cut(s) 379, 540, 786, 1044, 1165, 1245, 1269, 1289
SseBI AGGCCT 1 cut(s) 356
SsiI CCGC 7 cut(s) 56, 276, 283, 606, 635, 1068, 1086
SspMI CTAG 2 cut(s) 302, 900
SstI GAGCTC 1 cut(s) 378
StuI AGGCCT 1 cut(s) 356
StyD4I CCNGG 4 cut(s) 34, 156, 502, 646
StyI CCWWGG 2 cut(s) 979, 1054
TaaI ACNGT 2 cut(s) 103, 1102
TaiI ACGT 2 cut(s) 18, 219
TaqI TCGA 5 cut(s) 230, 237, 311, 953, 1061
TaqII GACCGA 2 cut(s) 255, 971
TasI AATT 8 cut(s) 379, 540, 786, 1044, 1165, 1245, 1269, 1289
TatI WGTACW 1 cut(s) 471
TfiI GAWTC 1 cut(s) 227
Tru1I TTAA 1 cut(s) 965
Tru9I TTAA 1 cut(s) 965
TseFI GTSAC 2 cut(s) 103, 267
TseI GCWGC 5 cut(s) 5, 385, 514, 608, 929
Tsp45I GTSAC 2 cut(s) 103, 267
TspDTI ATGAA 3 cut(s) 103, 860, 1178
Tth111I GACNNNGTC 3 cut(s) 215, 265, 681
VpaK11BI GGWCC 3 cut(s) 493, 713, 1039
XapI RAATTY 3 cut(s) 540, 1044, 1165
XmiI GTMKAC 3 cut(s) 311, 1061, 1358
XspI CTAG 2 cut(s) 302, 900
ZraI GACGTC 1 cut(s) 217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.