Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0005540

Physical Location & Seq

Genomic Coordinates Forward (+)

30161142 .. 30165888

Gene Structure 4747 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG295100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGACAACTTTGTTATCTACTTCAACTCTCTCTTCGACAACAAAGCTGAGCCTGAAGCTTGTCAACAATGACAACCCAGCTCCGAAATCCCACCTCGCCACAGACAAGTACAAACATACCCAAAAGGTTTCATTCGTAAGTCTTGCTGTAAAGAAGCAACAGAGCATTGAAACAATCCAGAAAGTTGATGGGAAGATCACTAGGAGGAGAAAAGGTGGTGGAAGTGGAACCCCATTTTTGAGTGAGGGAAGAGATGAGGATGAGAGCTATGGTCCAGTTTGCCCAGGCTGTGGAATCTTTATGCAAGATAACAACCCAGACCTTCCTGGGTATTATAAGCAAAGGAAGTTAACTGTATCAGCAGAGTTGCCAGATGCTGAAGAGTTTGATGAGGAAGAGGAGGACATTGAGGGTAGCTATGAGGAAAGTGATGGGGAAGAAAGTGAATTGGAAATGGGGGATGATGAGTTTGACTGGGATTCAGATGACTTGGAATCTAAGTTGTTGGGGGAGGAAGAAGAGAATGATTTGGATTTGGATGGTTTTGCCCCTGCAGGGGTTGGGTATGGTAACATTAAGGAGGAGACTATAGAGAAAATGAAGAGGAAGAAGATACCAAAAGCCGAAAAGAAGAGAATGGCTAGGGAGGCTCAGAAAGAGAAAGATGAGGTTACTGTGTGCGCCAGATGCCATTCATTGAGAAATTATGGGCAGGTGAAAAACCAAGCAGCCGAAAACTTGATGCCCGATTTTGATTTCGATAGGTTGATTGCAACCCGGTTGATTAAACCTGCTACTAATGCCAATCCTGTTGTGGTTATGGTTGTTGATTGCGTTGATTTTGATGGCTCATTCCCCAAACGGGCAGCAAAGTCATTGTTTCAGGCATTGAGAGGAACCGAGAATGATCCCAAGTTTCAGAAAAAAATGCCAAAGCTTGTTCTTGTGGCCACAAAGGTTGATCTCCTCCCATCACAAGTTTCACCTTCTAGATTAGATAGATGGGTACGCCATCGTGCTAAGGCTGGAGGGGGACCTAAACTGAGTGGAGTGTATTTGGTTAGTGCTCATAAGGATGTGGGTGTCAGAAATTTGTTGTCCTTTCTCAAAGAATTGGCAGGTCCTCGAGGGAATGTGTGGGTTGTTGGAGCTCAAAATGCAGGCAAGTCTACTCTAATAAATGCGCTGGCAAAGAAAGAAGGGGCAAAGGTTACAAAGCTAACTGAAGCTCCAGTTCCTGGCACAACATTAGGGATCCTGAGAGTTGGAGGGATTTTGTCAGCCAAGGCAAAGTTGTTTGACACTCCAGGACTTTTACATCCATATTTGGTCTCCATGAGATTGAATAGGGATGAACAGAAAATGGTTGAAATACGGAAGGAGCTTCGCCCTCGGACTTATAGGATAAAGGCAAGGCAGACCATTCATATTGGTGGTTTAGTGAGAGTAGACCTTATTCAAGCCTCTATTGAAACAATTTATTTCACAATATGGGCCTCACCAAATATTTCTTTACATATGGGGAAGACAGAAAATGCTGAAGAGACTTGGAGGAAACATGTTGGCGTTAGGTTGCAGCCACCTATTGGCATCGATCGCGCTGCTGACATAGGCAAATGGGAAGAGAGGGAAGTAAAAGTGTCTGGAGCCAGTTGGGATGTAAATAGCATCGACATTGCTATAGCTGGTTTAGGCTGGTTTTCTTTAGGTCTCAAAGGGGAAGCAACTTTGGCATTATGGACATATGATGGTATTGAAATTACTCTGAGAGAACCGTTGGTTCTTGATAGGGCACCATCGCTTGAGAGACCTGGGTTCTGGCTTCCAAAAGCAATATCTGAGGCCCTTGGTGCTCAGAGTAAACTTGAAGCTCAAAGGAAAAAGCTAGAAATGGAAAATGCAGATTCCCTTTCTGAGGCAGTTAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003924 GO:0006275 GO:0008150 GO:0008156 GO:0009889 GO:0009890 GO:0009892 GO:0010556 GO:0010558 GO:0010605 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019219 GO:0019222 GO:0022613 GO:0030174 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032297 GO:0042254 GO:0044085 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0060255 GO:0065007 GO:0071840 GO:0080090 GO:0090329 GO:2000104 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MMR_HSR1

Protein Analysis

642

Amino Acids

71.13

Weight (kDa)

6.41

Isoelectric Point (pI)

40.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MMR_HSR1	PF01926	379 - 446	5.3e-10	50S ribosome-binding GTPase
YqeH-like_C	PF21516	495 - 592	6.9e-10	YqeH-like, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005540)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g24800 FvH4_6g24800 FvH4_6g24800 FvH4_6g24800 FvH4_6g24800 FvH4_6g24800
malus_domestica	MD12G1089400.v1.1
prunus_persica	Prupe.7G049400_v2.0.a1 Prupe.7G049400_v2.0.a1 Prupe.7G049400_v2.0.a1
pyrus_communis	pycom12g07380 pycom12g07390
rosa_chinensis	RchiOBHm_Chr3g0484591
rosa_laevigata	RLG00000023217
rosa_multiflora	Rmu_co8327473.1_g000001 Rmu_sc0000295.1_g000043 Rmu_sc0016014.1_g000001
rosa_roxburghii	Rroxscaffold_3G00248500 Rroxscaffold_6G00397610 Rroxscaffold_7G00205420
rosa_rugosa	Rorug03G0212100 Rorug03G0212200 Rorug03G0212300 Rorug03G0212400 Rorug03G0212500
rosa_samantha	Rh3AG262700 Rh3BG298100 Rh3CG295100 Rh3DG291400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	336
AarI	CACCTGC	1 cut(s)	703
AbsI	CCTCGAGG	1 cut(s)	1125
Acc36I	ACCTGC	3 cut(s)	703, 799, 1109
AccB1I	GGYRCC	1 cut(s)	1792
AccB7I	CCANNNNNTGG	3 cut(s)	290, 1238, 1586
AccI	GTMKAC	2 cut(s)	1169, 1449
AccII	CGCG	1 cut(s)	1599
AclWI	GGATC	3 cut(s)	902, 1249, 1262
AcoI	YGGCCR	1 cut(s)	948
AcsI	RAATTY	1 cut(s)	1090
AcuI	CTGAAG	4 cut(s)	74, 399, 1245, 1560
AfaI	GTAC	2 cut(s)	110, 1008
AfiI	CCNNNNNNNGG	7 cut(s)	290, 555, 556, 862, 1238, 1586, 1915
AflIII	ACRYGT	1 cut(s)	1558
AgsI	TTSAA	8 cut(s)	24, 170, 1345, 1370, 1460, 1472, 1757, 1868
AjnI	CCWGG	5 cut(s)	283, 325, 1237, 1306, 1810
Alw21I	GWGCWC	3 cut(s)	1069, 1153, 1855
Alw26I	GTCTC	5 cut(s)	578, 1336, 1538, 1715, 1801
AlwI	GGATC	3 cut(s)	902, 1249, 1262
AlwNI	CAGNNNCTG	2 cut(s)	377, 1238
Ama87I	CYCGRG	1 cut(s)	1125
AoxI	GGCC	3 cut(s)	948, 1494, 1842
ApeKI	GCWGC	4 cut(s)	728, 866, 1576, 1601
ApoI	RAATTY	1 cut(s)	1090
AspLEI	GCGC	3 cut(s)	683, 1186, 1601
AspS9I	GGNCC	5 cut(s)	272, 1034, 1121, 1494, 1843
AsuC2I	CCSGG	1 cut(s)	778
AsuHPI	GGTGA	3 cut(s)	727, 975, 1491
AvaI	CYCGRG	1 cut(s)	1125
AvaII	GGWCC	3 cut(s)	272, 1034, 1121
BaeGI	GKGCMC	1 cut(s)	1795
BalI	TGGCCA	1 cut(s)	950
BamHI	GGATCC	1 cut(s)	1254
BanI	GGYRCC	1 cut(s)	1792
BanII	GRGCYC	1 cut(s)	1153
BbsI	GAAGAC	1 cut(s)	1532
Bbv12I	GWGCWC	3 cut(s)	1069, 1153, 1855
BbvI	GCAGC	4 cut(s)	740, 878, 1588, 1588
BccI	CCATC	9 cut(s)	182, 425, 533, 839, 979, 996, 1020, 1742, 1804
BcgI	CGANNNNNNTGC	2 cut(s)	1583, 1617
BciT130I	CCWGG	5 cut(s)	285, 327, 1239, 1308, 1812
BcnI	CCSGG	1 cut(s)	778
BcoDI	GTCTC	5 cut(s)	578, 1336, 1538, 1715, 1801
BfaI	CTAG	4 cut(s)	201, 642, 990, 1886
BfmI	CTRYAG	3 cut(s)	552, 588, 1680
BfuAI	ACCTGC	3 cut(s)	703, 799, 1109
BisI	GCNGC	4 cut(s)	729, 867, 1577, 1602
BlpI	GCTNAGC	1 cut(s)	47
BlsI	GCNGC	4 cut(s)	730, 868, 1578, 1603
Bme1390I	CCNGG	6 cut(s)	285, 327, 778, 1239, 1308, 1812
Bme18I	GGWCC	3 cut(s)	272, 1034, 1121
BmeT110I	CYCGRG	1 cut(s)	1125
BmgT120I	GGNCC	5 cut(s)	272, 1034, 1121, 1494, 1843
BmiI	GGNNCC	6 cut(s)	229, 898, 1035, 1256, 1648, 1794
BmrFI	CCNGG	6 cut(s)	285, 327, 778, 1239, 1308, 1812
BmrI	ACTGGG	1 cut(s)	484
BmsI	GCATC	5 cut(s)	364, 677, 732, 1599, 1677
BmuI	ACTGGG	1 cut(s)	484
BpiI	GAAGAC	1 cut(s)	1532
BpmI	CTGGAG	4 cut(s)	1047, 1215, 1290, 1665
Bpu10I	CCTNAGC	1 cut(s)	1020
Bpu1102I	GCTNAGC	1 cut(s)	47
BpuEI	CTTGAG	1 cut(s)	1823
BpuMI	CCSGG	1 cut(s)	778
Bsa29I	ATCGAT	1 cut(s)	1593
BsaI	GGTCTC	3 cut(s)	1336, 1715, 1801
BsaJI	CCNNGG	6 cut(s)	283, 326, 1284, 1391, 1811, 1846
BsaXI	ACNNNNNCTCC	4 cut(s)	199, 229, 1213, 1243
Bsc4I	CCNNNNNNNGG	7 cut(s)	290, 555, 556, 862, 1238, 1586, 1915
Bse1I	ACTGG	4 cut(s)	275, 479, 1232, 1650
Bse3DI	GCAATG	1 cut(s)	1674
BseBI	CCWGG	5 cut(s)	285, 327, 1239, 1308, 1812
BseCI	ATCGAT	1 cut(s)	1593
BseDI	CCNNGG	6 cut(s)	283, 326, 1284, 1391, 1811, 1846
BseGI	GGATG	7 cut(s)	265, 466, 544, 1081, 1318, 1357, 1663
BseLI	CCNNNNNNNGG	7 cut(s)	290, 555, 556, 862, 1238, 1586, 1915
BseMI	GCAATG	1 cut(s)	1674
BseMII	CTCAG	8 cut(s)	38, 665, 1034, 1250, 1757, 1830, 1868, 1905
BseNI	ACTGG	4 cut(s)	275, 479, 1232, 1650
BseRI	GAGGAG	4 cut(s)	220, 413, 596, 956
BseSI	GKGCMC	1 cut(s)	1795
BseXI	GCAGC	4 cut(s)	740, 878, 1588, 1588
BseYI	CCCAGC	1 cut(s)	76
Bsh1236I	CGCG	1 cut(s)	1599
Bsh1285I	CGRYCG	1 cut(s)	1597
BshFI	GGCC	3 cut(s)	950, 1496, 1844
BshNI	GGYRCC	1 cut(s)	1792
BshVI	ATCGAT	1 cut(s)	1593
BsiEI	CGRYCG	1 cut(s)	1597
BsiHKAI	GWGCWC	3 cut(s)	1069, 1153, 1855
BsiHKCI	CYCGRG	1 cut(s)	1125
BsiSI	CCGG	1 cut(s)	778
BslFI	GGGAC	1 cut(s)	1047
BslI	CCNNNNNNNGG	7 cut(s)	290, 555, 556, 862, 1238, 1586, 1915
BsmAI	GTCTC	5 cut(s)	578, 1336, 1538, 1715, 1801
BsmFI	GGGAC	1 cut(s)	1047
BsnI	GGCC	3 cut(s)	950, 1496, 1844
Bso31I	GGTCTC	3 cut(s)	1336, 1715, 1801
BsoBI	CYCGRG	1 cut(s)	1125
Bsp1286I	GDGCHC	4 cut(s)	1069, 1153, 1795, 1855
Bsp143I	GATC	5 cut(s)	195, 907, 961, 1254, 1594
Bsp1720I	GCTNAGC	1 cut(s)	47
BspANI	GGCC	3 cut(s)	950, 1496, 1844
BspCNI	CTCAG	8 cut(s)	39, 664, 1035, 1251, 1758, 1831, 1867, 1906
BspDI	ATCGAT	1 cut(s)	1593
BspFNI	CGCG	1 cut(s)	1599
BspLI	GGNNCC	6 cut(s)	229, 898, 1035, 1256, 1648, 1794
BspMAI	CTGCAG	1 cut(s)	556
BspMI	ACCTGC	3 cut(s)	703, 799, 1109
BspPI	GGATC	3 cut(s)	902, 1249, 1262
BspT107I	GGYRCC	1 cut(s)	1792
BspTNI	GGTCTC	3 cut(s)	1336, 1715, 1801
BsrDI	GCAATG	1 cut(s)	1674
BsrI	ACTGG	4 cut(s)	275, 479, 1232, 1650
BssECI	CCNNGG	6 cut(s)	283, 326, 1284, 1391, 1811, 1846
BssMI	GATC	5 cut(s)	195, 907, 961, 1254, 1594
BssT1I	CCWWGG	2 cut(s)	1284, 1846
Bst2UI	CCWGG	5 cut(s)	285, 327, 1239, 1308, 1812
Bst4CI	ACNGT	3 cut(s)	355, 676, 1776
Bst6I	CTCTTC	9 cut(s)	37, 244, 375, 390, 513, 596, 626, 1536, 1617
BstC8I	GCNNGC	2 cut(s)	1162, 1188
BstENI	CCTNNNNNAGG	1 cut(s)	1913
BstF5I	GGATG	7 cut(s)	265, 466, 544, 1081, 1318, 1357, 1663
BstFNI	CGCG	1 cut(s)	1599
BstHHI	GCGC	3 cut(s)	683, 1186, 1601
BstKTI	GATC	5 cut(s)	198, 910, 964, 1257, 1597
BstMAI	GTCTC	5 cut(s)	578, 1336, 1538, 1715, 1801
BstMBI	GATC	5 cut(s)	195, 907, 961, 1254, 1594
BstMCI	CGRYCG	1 cut(s)	1597
BstMWI	GCNNNNNNNGC	7 cut(s)	647, 687, 800, 1157, 1596, 1730, 1850
BstNI	CCWGG	5 cut(s)	285, 327, 1239, 1308, 1812
BstNSI	RCATGY	1 cut(s)	1562
BstSCI	CCNGG	6 cut(s)	283, 325, 776, 1237, 1306, 1810
BstSFI	CTRYAG	3 cut(s)	552, 588, 1680
BstSLI	GKGCMC	1 cut(s)	1795
BstUI	CGCG	1 cut(s)	1599
BstV1I	GCAGC	4 cut(s)	740, 878, 1588, 1588
BstV2I	GAAGAC	1 cut(s)	1532
BstX2I	RGATCY	1 cut(s)	1254
BstYI	RGATCY	1 cut(s)	1254
Bsu15I	ATCGAT	1 cut(s)	1593
BsuRI	GGCC	3 cut(s)	950, 1496, 1844
BsuTUI	ATCGAT	1 cut(s)	1593
BtgZI	GCGATG	1 cut(s)	1782
BtsCI	GGATG	7 cut(s)	265, 466, 544, 1081, 1318, 1357, 1663
BveI	ACCTGC	3 cut(s)	703, 799, 1109
Cac8I	GCNNGC	2 cut(s)	1162, 1188
CaiI	CAGNNNCTG	2 cut(s)	377, 1238
CfoI	GCGC	3 cut(s)	683, 1186, 1601
Cfr13I	GGNCC	5 cut(s)	272, 1034, 1121, 1494, 1843
ClaI	ATCGAT	1 cut(s)	1593
Csp6I	GTAC	2 cut(s)	109, 1007
CspCI	CAANNNNNGTGG	2 cut(s)	940, 975
CviAII	CATG	2 cut(s)	1336, 1559
CviQI	GTAC	2 cut(s)	109, 1007
DpnI	GATC	5 cut(s)	197, 909, 963, 1256, 1596
DpnII	GATC	5 cut(s)	195, 907, 961, 1254, 1594
EaeI	YGGCCR	1 cut(s)	948
Eam1104I	CTCTTC	9 cut(s)	37, 244, 375, 390, 513, 596, 626, 1536, 1617
EarI	CTCTTC	9 cut(s)	37, 244, 375, 390, 513, 596, 626, 1536, 1617
Ecl136II	GAGCTC	1 cut(s)	1151
Eco130I	CCWWGG	2 cut(s)	1284, 1846
Eco24I	GRGCYC	1 cut(s)	1153
Eco31I	GGTCTC	3 cut(s)	1336, 1715, 1801
Eco47I	GGWCC	3 cut(s)	272, 1034, 1121
Eco53kI	GAGCTC	1 cut(s)	1151
Eco57I	CTGAAG	4 cut(s)	74, 399, 1245, 1560
Eco88I	CYCGRG	1 cut(s)	1125
EcoICRI	GAGCTC	1 cut(s)	1151
EcoNI	CCTNNNNNAGG	1 cut(s)	1913
EcoO109I	RGGNCCY	3 cut(s)	1034, 1121, 1843
EcoRII	CCWGG	5 cut(s)	283, 325, 1237, 1306, 1810
EcoT14I	CCWWGG	2 cut(s)	1284, 1846
EcoT38I	GRGCYC	1 cut(s)	1153
ErhI	CCWWGG	2 cut(s)	1284, 1846
FaeI	CATG	2 cut(s)	1339, 1562
FaqI	GGGAC	1 cut(s)	1047
FatI	CATG	2 cut(s)	1335, 1558
FauNDI	CATATG	2 cut(s)	1518, 1744
FblI	GTMKAC	2 cut(s)	1169, 1449
Fnu4HI	GCNGC	4 cut(s)	729, 867, 1577, 1602
FokI	GGATG	7 cut(s)	272, 473, 551, 1088, 1305, 1364, 1670
FriOI	GRGCYC	1 cut(s)	1153
Fsp4HI	GCNGC	4 cut(s)	729, 867, 1577, 1602
FspBI	CTAG	4 cut(s)	201, 642, 990, 1886
GlaI	GCGC	3 cut(s)	682, 1185, 1600
GluI	GCNGC	4 cut(s)	729, 867, 1577, 1602
GsaI	CCCAGC	1 cut(s)	80
GsuI	CTGGAG	4 cut(s)	1047, 1215, 1290, 1665
HaeIII	GGCC	3 cut(s)	950, 1496, 1844
HapII	CCGG	1 cut(s)	778
HhaI	GCGC	3 cut(s)	683, 1186, 1601
Hin1II	CATG	2 cut(s)	1339, 1562
Hin6I	GCGC	3 cut(s)	681, 1184, 1599
HinP1I	GCGC	3 cut(s)	681, 1184, 1599
HincII	GTYRAC	2 cut(s)	64, 351
HindII	GTYRAC	2 cut(s)	64, 351
HindIII	AAGCTT	2 cut(s)	56, 935
HinfI	GANTC	4 cut(s)	294, 479, 494, 1904
HpaI	GTTAAC	1 cut(s)	351
HpaII	CCGG	1 cut(s)	778
HphI	GGTGA	3 cut(s)	727, 975, 1491
Hpy166II	GTNNAC	5 cut(s)	64, 351, 1170, 1450, 1862
Hpy188III	TCNNGA	5 cut(s)	178, 990, 1258, 1644, 1784
Hpy8I	GTNNAC	5 cut(s)	64, 351, 1170, 1450, 1862
HpyAV	CCTTC	4 cut(s)	332, 996, 1193, 1372
HpyCH4III	ACNGT	3 cut(s)	355, 676, 1776
HpyCH4V	TGCA	6 cut(s)	304, 554, 773, 1160, 1576, 1901
HpyF10VI	GCNNNNNNNGC	7 cut(s)	647, 687, 800, 1157, 1596, 1730, 1850
Hsp92II	CATG	2 cut(s)	1339, 1562
HspAI	GCGC	3 cut(s)	681, 1184, 1599
KspAI	GTTAAC	1 cut(s)	351
Kzo9I	GATC	5 cut(s)	195, 907, 961, 1254, 1594
LmnI	GCTCC	5 cut(s)	85, 1148, 1234, 1381, 1646
Lsp1109I	GCAGC	4 cut(s)	740, 878, 1588, 1588
LweI	GCATC	5 cut(s)	364, 677, 732, 1599, 1677
MaeI	CTAG	4 cut(s)	201, 642, 990, 1886
MaeIII	GTNAC	3 cut(s)	569, 670, 1210
MalI	GATC	5 cut(s)	197, 909, 963, 1256, 1596
MboI	GATC	5 cut(s)	195, 907, 961, 1254, 1594
MflI	RGATCY	1 cut(s)	1254
MhlI	GDGCHC	4 cut(s)	1069, 1153, 1795, 1855
MlsI	TGGCCA	1 cut(s)	950
MluCI	AATT	7 cut(s)	446, 703, 1090, 1112, 1476, 1758, 1924
MluNI	TGGCCA	1 cut(s)	950
MmeI	TCCRAC	2 cut(s)	1126, 1246
Mox20I	TGGCCA	1 cut(s)	950
MscI	TGGCCA	1 cut(s)	950
MseI	TTAA	4 cut(s)	350, 576, 786, 1923
MslI	CAYNNNNRTG	2 cut(s)	1074, 1431
Msp20I	TGGCCA	1 cut(s)	950
MspI	CCGG	1 cut(s)	778
MspR9I	CCNGG	6 cut(s)	285, 327, 778, 1239, 1308, 1812
MvaI	CCWGG	5 cut(s)	285, 327, 1239, 1308, 1812
MvnI	CGCG	1 cut(s)	1599
MwoI	GCNNNNNNNGC	7 cut(s)	647, 687, 800, 1157, 1596, 1730, 1850
NciI	CCSGG	1 cut(s)	778
NdeI	CATATG	2 cut(s)	1518, 1744
NdeII	GATC	5 cut(s)	195, 907, 961, 1254, 1594
NlaIII	CATG	2 cut(s)	1339, 1562
NlaIV	GGNNCC	6 cut(s)	229, 898, 1035, 1256, 1648, 1794
NspI	RCATGY	1 cut(s)	1562
PaeR7I	CTCGAG	1 cut(s)	1125
PaqCI	CACCTGC	1 cut(s)	703
PciI	ACATGT	1 cut(s)	1558
PfeI	GAWTC	4 cut(s)	294, 479, 494, 1904
PflMI	CCANNNNNTGG	3 cut(s)	290, 1238, 1586
PfoI	TCCNGGA	1 cut(s)	1306
PkrI	GCNGC	4 cut(s)	730, 868, 1578, 1603
Ple19I	CGATCG	1 cut(s)	1597
PpuMI	RGGWCCY	2 cut(s)	1034, 1121
PscI	ACATGT	1 cut(s)	1558
PsiI	TTATAA	1 cut(s)	336
Psp124BI	GAGCTC	1 cut(s)	1153
Psp5II	RGGWCCY	2 cut(s)	1034, 1121
Psp6I	CCWGG	5 cut(s)	283, 325, 1237, 1306, 1810
PspFI	CCCAGC	1 cut(s)	76
PspGI	CCWGG	5 cut(s)	283, 325, 1237, 1306, 1810
PspN4I	GGNNCC	6 cut(s)	229, 898, 1035, 1256, 1648, 1794
PspPI	GGNCC	5 cut(s)	272, 1034, 1121, 1494, 1843
PspPPI	RGGWCCY	2 cut(s)	1034, 1121
PspXI	VCTCGAGB	1 cut(s)	1125
PstI	CTGCAG	1 cut(s)	556
PstNI	CAGNNNCTG	2 cut(s)	377, 1238
PsuI	RGATCY	1 cut(s)	1254
PvuI	CGATCG	1 cut(s)	1597
RsaI	GTAC	2 cut(s)	110, 1008
RsaNI	GTAC	2 cut(s)	109, 1007
RseI	CAYNNNNRTG	2 cut(s)	1074, 1431
SacI	GAGCTC	1 cut(s)	1153
SaqAI	TTAA	4 cut(s)	350, 576, 786, 1923
SatI	GCNGC	4 cut(s)	729, 867, 1577, 1602
Sau3AI	GATC	5 cut(s)	195, 907, 961, 1254, 1594
Sau96I	GGNCC	5 cut(s)	272, 1034, 1121, 1494, 1843
SbfI	CCTGCAGG	1 cut(s)	556
ScrFI	CCNGG	6 cut(s)	285, 327, 778, 1239, 1308, 1812
SdaI	CCTGCAGG	1 cut(s)	556
SduI	GDGCHC	4 cut(s)	1069, 1153, 1795, 1855
SfaNI	GCATC	5 cut(s)	364, 677, 732, 1599, 1677
SfcI	CTRYAG	3 cut(s)	552, 588, 1680
Sfr274I	CTCGAG	1 cut(s)	1125
SinI	GGWCC	3 cut(s)	272, 1034, 1121
SlaI	CTCGAG	1 cut(s)	1125
SmiMI	CAYNNNNRTG	2 cut(s)	1074, 1431
SmlI	CTYRAG	2 cut(s)	1125, 1802
SmoI	CTYRAG	2 cut(s)	1125, 1802
Sse8387I	CCTGCAGG	1 cut(s)	556
Sse9I	AATT	7 cut(s)	446, 703, 1090, 1112, 1476, 1758, 1924
SspI	AATATT	1 cut(s)	1507
SspMI	CTAG	4 cut(s)	201, 642, 990, 1886
SstI	GAGCTC	1 cut(s)	1153
StyD4I	CCNGG	6 cut(s)	283, 325, 776, 1237, 1306, 1810
StyI	CCWWGG	2 cut(s)	1284, 1846
TaaI	ACNGT	3 cut(s)	355, 676, 1776
TaqI	TCGA	5 cut(s)	35, 759, 1126, 1593, 1671
TasI	AATT	7 cut(s)	446, 703, 1090, 1112, 1476, 1758, 1924
TatI	WGTACW	1 cut(s)	108
TfiI	GAWTC	4 cut(s)	294, 479, 494, 1904
Tru1I	TTAA	4 cut(s)	350, 576, 786, 1923
Tru9I	TTAA	4 cut(s)	350, 576, 786, 1923
TseI	GCWGC	4 cut(s)	728, 866, 1576, 1601
TspDTI	ATGAA	5 cut(s)	120, 614, 684, 1368, 1415
TspGWI	ACGGA	1 cut(s)	1390
Van91I	CCANNNNNTGG	3 cut(s)	290, 1238, 1586
VpaK11BI	GGWCC	3 cut(s)	272, 1034, 1121
XagI	CCTNNNNNAGG	1 cut(s)	1913
XapI	RAATTY	1 cut(s)	1090
XbaI	TCTAGA	1 cut(s)	989
XceI	RCATGY	1 cut(s)	1562
XcmI	CCANNNNNNNNNTGG	2 cut(s)	185, 811
XhoI	CTCGAG	1 cut(s)	1125
XmiI	GTMKAC	2 cut(s)	1169, 1449
XspI	CTAG	4 cut(s)	201, 642, 990, 1886

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.