Rmu_sc0016014.1_g000001

50S ribosome-binding GTPase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0016014.1
Physical Location & Seq
Reverse (-)
2 .. 4486
4485 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0016014.1_g000001.1.cds

Sequence Viewer

Length: 1678 bp
atgacaactttgttatctacttcaactctctcttcgacaacaaagctgagcctgaagcttgtcaacaatgacaacccagctccgaaatcccacctcgccacagacaagtacaaacatacccaaaaggtttcattcgtaagtcttgctgtaaagaagcaacagagcgttgaaacaatccagaaagttgatgggaagatcactaggaggagaaaaggtggtggaagtggaaccccatttttgagtgagggaagagatgaggatgagggctatggtccagtttgccctggctgtggaatctttatgcaagataacaacccagaccttcctgggtattataagcaaaggaagttaactgtatcagcagagttgctagatgttgaagagtttgatgaggaagaggaggacattgagggtagctatgaggaaagtgatggggaagaaagtgaattggaaatgggggatgatgagtttgactgggattcagatgacttggaatctaagttgttgggggaggaagaagagaatgatttggatttggatggttttgcccctgcaggggttgggtatggtaacattaaggaggagactatagagaaaatgaagaggaagaagataccaaaagccgaaaagaagagaatggctagggaggctcagaaagagaaagatgaggttactgtgtgcgccagatgccattcattgagaaattatgggcaggtgaaaaaccaagcagccgaaaacttgatgcccgattttgatttcgataggttgattgcaacccggttgattaaacctgctactaatgccaatcctgttgtggttatggttgttgattgtgttgattttgatggctcattccccaaacgggcagcaaagtcattgtttcaggcattgagaggaaccgagaatgatcccaagtttcagaaaaaaatgccaaagcttgttcttgtggcctcaaaggttgatctcctcccatcacaagtttcaccttctagattagatagatgggtacgccatcgtgcgaaggctggagggggacctaaactgagtggagtgtatttggttagtgctcataaggatgtgggtgtcagaaatttgttgtcctttctcaaagaattggcaggtcctcgagggaatgtgtgggttgttggagctcaaaatgcaggcaagtctactctaataaatgcgctggcaaagaaagaaggggcaaaggttacaaagctaactgaagctccagttcctggcacaacgttagggatcctgagagttggagggattttgtcagccaaggcaaagttgtttgacactccaggacttttacatccatatttggtctccatgagattgaatagggatgaacagaaaatggttgaaatacggaaggagcttcgccctcggacttataggataaaggcagggcagaccattcatattggtggtttagtgagagtagaccttattcaagcctctattgaaacaatttatttcacaatatgggcctcaccaaatatttctttacatatggggaagacagaaaatgctgaagagacttggaggaaacatgttggcgttaggttgcagccacctattggcatcgatcacgctgctgacataggcaaatgggaagagagggaagtaaaagtgtctggagccagttgggatgtaaatagcatcgacattg

Protein Analysis

559

Amino Acids

61.97

Weight (kDa)

6.61

Isoelectric Point (pI)

39.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 336
AarI CACCTGC 1 cut(s) 703
AbsI CCTCGAGG 1 cut(s) 1125
Acc36I ACCTGC 3 cut(s) 703, 799, 1109
AccB7I CCANNNNNTGG 2 cut(s) 1238, 1586
AccI GTMKAC 2 cut(s) 1169, 1449
AclI AACGTT 1 cut(s) 1247
AclWI GGATC 3 cut(s) 902, 1249, 1262
AcsI RAATTY 1 cut(s) 1090
AcuI CTGAAG 3 cut(s) 74, 1245, 1560
AfaI GTAC 2 cut(s) 110, 1008
AfiI CCNNNNNNNGG 6 cut(s) 290, 555, 556, 862, 1238, 1586
AflIII ACRYGT 1 cut(s) 1558
AgsI TTSAA 7 cut(s) 24, 170, 380, 1345, 1370, 1460, 1472
AjnI CCWGG 4 cut(s) 283, 325, 1237, 1306
AluBI AGCT 9 cut(s) 46, 58, 80, 417, 937, 1151, 1219, 1229, 1384
AluI AGCT 9 cut(s) 46, 58, 80, 417, 937, 1151, 1219, 1229, 1384
Alw21I GWGCWC 2 cut(s) 1069, 1153
Alw26I GTCTC 3 cut(s) 578, 1336, 1538
AlwI GGATC 3 cut(s) 902, 1249, 1262
AlwNI CAGNNNCTG 1 cut(s) 1238
Ama87I CYCGRG 1 cut(s) 1125
AoxI GGCC 2 cut(s) 948, 1494
ApeKI GCWGC 4 cut(s) 728, 866, 1576, 1601
ApoI RAATTY 1 cut(s) 1090
AspLEI GCGC 2 cut(s) 683, 1186
AspS9I GGNCC 4 cut(s) 272, 1034, 1121, 1494
AsuC2I CCSGG 1 cut(s) 778
AsuHPI GGTGA 3 cut(s) 727, 975, 1491
AvaI CYCGRG 1 cut(s) 1125
AvaII GGWCC 3 cut(s) 272, 1034, 1121
BamHI GGATCC 1 cut(s) 1254
BanII GRGCYC 1 cut(s) 1153
BbsI GAAGAC 1 cut(s) 1532
Bbv12I GWGCWC 2 cut(s) 1069, 1153
BbvI GCAGC 4 cut(s) 740, 878, 1588, 1588
BccI CCATC 7 cut(s) 182, 425, 533, 839, 979, 996, 1020
BcgI CGANNNNNNTGC 2 cut(s) 1583, 1617
BciT130I CCWGG 4 cut(s) 285, 327, 1239, 1308
BcnI CCSGG 1 cut(s) 778
BcoDI GTCTC 3 cut(s) 578, 1336, 1538
BfaI CTAG 4 cut(s) 201, 371, 642, 990
BfmI CTRYAG 2 cut(s) 552, 588
BfuAI ACCTGC 3 cut(s) 703, 799, 1109
BisI GCNGC 4 cut(s) 729, 867, 1577, 1602
BlpI GCTNAGC 1 cut(s) 47
BlsI GCNGC 4 cut(s) 730, 868, 1578, 1603
Bme1390I CCNGG 5 cut(s) 285, 327, 778, 1239, 1308
Bme18I GGWCC 3 cut(s) 272, 1034, 1121
BmeT110I CYCGRG 1 cut(s) 1125
BmgT120I GGNCC 4 cut(s) 272, 1034, 1121, 1494
BmiI GGNNCC 5 cut(s) 229, 898, 1035, 1256, 1648
BmrFI CCNGG 5 cut(s) 285, 327, 778, 1239, 1308
BmrI ACTGGG 1 cut(s) 484
BmsI GCATC 3 cut(s) 677, 732, 1599
BmuI ACTGGG 1 cut(s) 484
BpiI GAAGAC 1 cut(s) 1532
BpmI CTGGAG 4 cut(s) 1047, 1215, 1290, 1665
Bpu1102I GCTNAGC 1 cut(s) 47
BpuMI CCSGG 1 cut(s) 778
Bsa29I ATCGAT 1 cut(s) 1593
BsaI GGTCTC 1 cut(s) 1336
BsaJI CCNNGG 4 cut(s) 283, 326, 1284, 1391
BsaXI ACNNNNNCTCC 4 cut(s) 199, 229, 1213, 1243
Bsc4I CCNNNNNNNGG 6 cut(s) 290, 555, 556, 862, 1238, 1586
Bse1I ACTGG 4 cut(s) 275, 479, 1232, 1650
BseBI CCWGG 4 cut(s) 285, 327, 1239, 1308
BseCI ATCGAT 1 cut(s) 1593
BseDI CCNNGG 4 cut(s) 283, 326, 1284, 1391
BseGI GGATG 7 cut(s) 265, 466, 544, 1081, 1318, 1357, 1663
BseLI CCNNNNNNNGG 6 cut(s) 290, 555, 556, 862, 1238, 1586
BseMII CTCAG 4 cut(s) 38, 665, 1034, 1250
BseNI ACTGG 4 cut(s) 275, 479, 1232, 1650
BseRI GAGGAG 4 cut(s) 220, 413, 596, 956
BseXI GCAGC 4 cut(s) 740, 878, 1588, 1588
BseYI CCCAGC 1 cut(s) 76
BshFI GGCC 2 cut(s) 950, 1496
BshVI ATCGAT 1 cut(s) 1593
BsiHKAI GWGCWC 2 cut(s) 1069, 1153
BsiHKCI CYCGRG 1 cut(s) 1125
BsiSI CCGG 1 cut(s) 778
BslFI GGGAC 1 cut(s) 1047
BslI CCNNNNNNNGG 6 cut(s) 290, 555, 556, 862, 1238, 1586
BsmAI GTCTC 3 cut(s) 578, 1336, 1538
BsmFI GGGAC 1 cut(s) 1047
BsnI GGCC 2 cut(s) 950, 1496
Bso31I GGTCTC 1 cut(s) 1336
BsoBI CYCGRG 1 cut(s) 1125
Bsp1286I GDGCHC 2 cut(s) 1069, 1153
Bsp143I GATC 5 cut(s) 195, 907, 961, 1254, 1594
Bsp1720I GCTNAGC 1 cut(s) 47
BspANI GGCC 2 cut(s) 950, 1496
BspCNI CTCAG 4 cut(s) 39, 664, 1035, 1251
BspDI ATCGAT 1 cut(s) 1593
BspLI GGNNCC 5 cut(s) 229, 898, 1035, 1256, 1648
BspMAI CTGCAG 1 cut(s) 556
BspMI ACCTGC 3 cut(s) 703, 799, 1109
BspPI GGATC 3 cut(s) 902, 1249, 1262
BspTNI GGTCTC 1 cut(s) 1336
BsrI ACTGG 4 cut(s) 275, 479, 1232, 1650
BssECI CCNNGG 4 cut(s) 283, 326, 1284, 1391
BssMI GATC 5 cut(s) 195, 907, 961, 1254, 1594
BssT1I CCWWGG 1 cut(s) 1284
Bst2UI CCWGG 4 cut(s) 285, 327, 1239, 1308
Bst4CI ACNGT 2 cut(s) 355, 676
Bst6I CTCTTC 9 cut(s) 37, 244, 375, 390, 513, 596, 626, 1536, 1617
BstC8I GCNNGC 2 cut(s) 1162, 1188
BstDEI CTNAG 5 cut(s) 47, 498, 651, 1043, 1259
BstF5I GGATG 7 cut(s) 265, 466, 544, 1081, 1318, 1357, 1663
BstHHI GCGC 2 cut(s) 683, 1186
BstKTI GATC 5 cut(s) 198, 910, 964, 1257, 1597
BstMAI GTCTC 3 cut(s) 578, 1336, 1538
BstMBI GATC 5 cut(s) 195, 907, 961, 1254, 1594
BstMWI GCNNNNNNNGC 4 cut(s) 647, 687, 800, 1157
BstNI CCWGG 4 cut(s) 285, 327, 1239, 1308
BstNSI RCATGY 1 cut(s) 1562
BstSCI CCNGG 5 cut(s) 283, 325, 776, 1237, 1306
BstSFI CTRYAG 2 cut(s) 552, 588
BstV1I GCAGC 4 cut(s) 740, 878, 1588, 1588
BstV2I GAAGAC 1 cut(s) 1532
BstX2I RGATCY 1 cut(s) 1254
BstYI RGATCY 1 cut(s) 1254
Bsu15I ATCGAT 1 cut(s) 1593
BsuRI GGCC 2 cut(s) 950, 1496
BsuTUI ATCGAT 1 cut(s) 1593
BtsCI GGATG 7 cut(s) 265, 466, 544, 1081, 1318, 1357, 1663
BveI ACCTGC 3 cut(s) 703, 799, 1109
Cac8I GCNNGC 2 cut(s) 1162, 1188
CaiI CAGNNNCTG 1 cut(s) 1238
CfoI GCGC 2 cut(s) 683, 1186
Cfr13I GGNCC 4 cut(s) 272, 1034, 1121, 1494
ClaI ATCGAT 1 cut(s) 1593
Csp6I GTAC 2 cut(s) 109, 1007
CviAII CATG 2 cut(s) 1336, 1559
CviQI GTAC 2 cut(s) 109, 1007
DdeI CTNAG 5 cut(s) 47, 498, 651, 1043, 1259
DpnI GATC 5 cut(s) 197, 909, 963, 1256, 1596
DpnII GATC 5 cut(s) 195, 907, 961, 1254, 1594
Eam1104I CTCTTC 9 cut(s) 37, 244, 375, 390, 513, 596, 626, 1536, 1617
EarI CTCTTC 9 cut(s) 37, 244, 375, 390, 513, 596, 626, 1536, 1617
Ecl136II GAGCTC 1 cut(s) 1151
Eco130I CCWWGG 1 cut(s) 1284
Eco24I GRGCYC 1 cut(s) 1153
Eco31I GGTCTC 1 cut(s) 1336
Eco47I GGWCC 3 cut(s) 272, 1034, 1121
Eco53kI GAGCTC 1 cut(s) 1151
Eco57I CTGAAG 3 cut(s) 74, 1245, 1560
Eco88I CYCGRG 1 cut(s) 1125
EcoICRI GAGCTC 1 cut(s) 1151
EcoO109I RGGNCCY 2 cut(s) 1034, 1121
EcoRII CCWGG 4 cut(s) 283, 325, 1237, 1306
EcoT14I CCWWGG 1 cut(s) 1284
EcoT38I GRGCYC 1 cut(s) 1153
ErhI CCWWGG 1 cut(s) 1284
FaeI CATG 2 cut(s) 1339, 1562
FaqI GGGAC 1 cut(s) 1047
FatI CATG 2 cut(s) 1335, 1558
FauNDI CATATG 1 cut(s) 1518
FblI GTMKAC 2 cut(s) 1169, 1449
Fnu4HI GCNGC 4 cut(s) 729, 867, 1577, 1602
FokI GGATG 7 cut(s) 272, 473, 551, 1088, 1305, 1364, 1670
FriOI GRGCYC 1 cut(s) 1153
Fsp4HI GCNGC 4 cut(s) 729, 867, 1577, 1602
FspBI CTAG 4 cut(s) 201, 371, 642, 990
GlaI GCGC 2 cut(s) 682, 1185
GluI GCNGC 4 cut(s) 729, 867, 1577, 1602
GsaI CCCAGC 1 cut(s) 80
GsuI CTGGAG 4 cut(s) 1047, 1215, 1290, 1665
HaeIII GGCC 2 cut(s) 950, 1496
HapII CCGG 1 cut(s) 778
HhaI GCGC 2 cut(s) 683, 1186
Hin1II CATG 2 cut(s) 1339, 1562
Hin6I GCGC 2 cut(s) 681, 1184
HinP1I GCGC 2 cut(s) 681, 1184
HincII GTYRAC 2 cut(s) 64, 351
HindII GTYRAC 2 cut(s) 64, 351
HindIII AAGCTT 2 cut(s) 56, 935
HinfI GANTC 3 cut(s) 294, 479, 494
HpaI GTTAAC 1 cut(s) 351
HpaII CCGG 1 cut(s) 778
HphI GGTGA 3 cut(s) 727, 975, 1491
Hpy166II GTNNAC 4 cut(s) 64, 351, 1170, 1450
Hpy188I TCNGA 6 cut(s) 84, 484, 654, 921, 1088, 1395
Hpy188III TCNNGA 4 cut(s) 178, 990, 1258, 1644
Hpy8I GTNNAC 4 cut(s) 64, 351, 1170, 1450
HpyAV CCTTC 5 cut(s) 332, 996, 1015, 1193, 1372
HpyCH4III ACNGT 2 cut(s) 355, 676
HpyCH4IV ACGT 1 cut(s) 1247
HpyCH4V TGCA 5 cut(s) 304, 554, 773, 1160, 1576
HpyF10VI GCNNNNNNNGC 4 cut(s) 647, 687, 800, 1157
HpyF3I CTNAG 5 cut(s) 47, 498, 651, 1043, 1259
HpySE526I ACGT 1 cut(s) 1247
Hsp92II CATG 2 cut(s) 1339, 1562
HspAI GCGC 2 cut(s) 681, 1184
KspAI GTTAAC 1 cut(s) 351
Kzo9I GATC 5 cut(s) 195, 907, 961, 1254, 1594
LmnI GCTCC 5 cut(s) 85, 1148, 1234, 1381, 1646
Lsp1109I GCAGC 4 cut(s) 740, 878, 1588, 1588
LweI GCATC 3 cut(s) 677, 732, 1599
MaeI CTAG 4 cut(s) 201, 371, 642, 990
MaeII ACGT 1 cut(s) 1247
MaeIII GTNAC 3 cut(s) 569, 670, 1210
MalI GATC 5 cut(s) 197, 909, 963, 1256, 1596
MboI GATC 5 cut(s) 195, 907, 961, 1254, 1594
MflI RGATCY 1 cut(s) 1254
MhlI GDGCHC 2 cut(s) 1069, 1153
MluCI AATT 5 cut(s) 446, 703, 1090, 1112, 1476
MmeI TCCRAC 2 cut(s) 1126, 1246
MseI TTAA 3 cut(s) 350, 576, 786
MslI CAYNNNNRTG 2 cut(s) 1074, 1431
MspI CCGG 1 cut(s) 778
MspR9I CCNGG 5 cut(s) 285, 327, 778, 1239, 1308
MvaI CCWGG 4 cut(s) 285, 327, 1239, 1308
MwoI GCNNNNNNNGC 4 cut(s) 647, 687, 800, 1157
NciI CCSGG 1 cut(s) 778
NdeI CATATG 1 cut(s) 1518
NdeII GATC 5 cut(s) 195, 907, 961, 1254, 1594
NlaIII CATG 2 cut(s) 1339, 1562
NlaIV GGNNCC 5 cut(s) 229, 898, 1035, 1256, 1648
NspI RCATGY 1 cut(s) 1562
PaeR7I CTCGAG 1 cut(s) 1125
PaqCI CACCTGC 1 cut(s) 703
PciI ACATGT 1 cut(s) 1558
PfeI GAWTC 3 cut(s) 294, 479, 494
PflMI CCANNNNNTGG 2 cut(s) 1238, 1586
PfoI TCCNGGA 1 cut(s) 1306
PkrI GCNGC 4 cut(s) 730, 868, 1578, 1603
PpuMI RGGWCCY 2 cut(s) 1034, 1121
PscI ACATGT 1 cut(s) 1558
PsiI TTATAA 1 cut(s) 336
Psp124BI GAGCTC 1 cut(s) 1153
Psp1406I AACGTT 1 cut(s) 1247
Psp5II RGGWCCY 2 cut(s) 1034, 1121
Psp6I CCWGG 4 cut(s) 283, 325, 1237, 1306
PspFI CCCAGC 1 cut(s) 76
PspGI CCWGG 4 cut(s) 283, 325, 1237, 1306
PspN4I GGNNCC 5 cut(s) 229, 898, 1035, 1256, 1648
PspPI GGNCC 4 cut(s) 272, 1034, 1121, 1494
PspPPI RGGWCCY 2 cut(s) 1034, 1121
PspXI VCTCGAGB 1 cut(s) 1125
PstI CTGCAG 1 cut(s) 556
PstNI CAGNNNCTG 1 cut(s) 1238
PsuI RGATCY 1 cut(s) 1254
RsaI GTAC 2 cut(s) 110, 1008
RsaNI GTAC 2 cut(s) 109, 1007
RseI CAYNNNNRTG 2 cut(s) 1074, 1431
SacI GAGCTC 1 cut(s) 1153
SaqAI TTAA 3 cut(s) 350, 576, 786
SatI GCNGC 4 cut(s) 729, 867, 1577, 1602
Sau3AI GATC 5 cut(s) 195, 907, 961, 1254, 1594
Sau96I GGNCC 4 cut(s) 272, 1034, 1121, 1494
SbfI CCTGCAGG 1 cut(s) 556
ScrFI CCNGG 5 cut(s) 285, 327, 778, 1239, 1308
SdaI CCTGCAGG 1 cut(s) 556
SduI GDGCHC 2 cut(s) 1069, 1153
SfaNI GCATC 3 cut(s) 677, 732, 1599
SfcI CTRYAG 2 cut(s) 552, 588
Sfr274I CTCGAG 1 cut(s) 1125
SinI GGWCC 3 cut(s) 272, 1034, 1121
SlaI CTCGAG 1 cut(s) 1125
SmiMI CAYNNNNRTG 2 cut(s) 1074, 1431
SmlI CTYRAG 1 cut(s) 1125
SmoI CTYRAG 1 cut(s) 1125
Sse8387I CCTGCAGG 1 cut(s) 556
Sse9I AATT 5 cut(s) 446, 703, 1090, 1112, 1476
SspI AATATT 1 cut(s) 1507
SspMI CTAG 4 cut(s) 201, 371, 642, 990
SstI GAGCTC 1 cut(s) 1153
StyD4I CCNGG 5 cut(s) 283, 325, 776, 1237, 1306
StyI CCWWGG 1 cut(s) 1284
TaaI ACNGT 2 cut(s) 355, 676
TaiI ACGT 1 cut(s) 1250
TaqI TCGA 5 cut(s) 35, 759, 1126, 1593, 1671
TasI AATT 5 cut(s) 446, 703, 1090, 1112, 1476
TatI WGTACW 1 cut(s) 108
TfiI GAWTC 3 cut(s) 294, 479, 494
Tru1I TTAA 3 cut(s) 350, 576, 786
Tru9I TTAA 3 cut(s) 350, 576, 786
TseI GCWGC 4 cut(s) 728, 866, 1576, 1601
TspDTI ATGAA 5 cut(s) 120, 614, 684, 1368, 1415
TspGWI ACGGA 1 cut(s) 1390
Van91I CCANNNNNTGG 2 cut(s) 1238, 1586
VpaK11BI GGWCC 3 cut(s) 272, 1034, 1121
XapI RAATTY 1 cut(s) 1090
XbaI TCTAGA 1 cut(s) 989
XceI RCATGY 1 cut(s) 1562
XcmI CCANNNNNNNNNTGG 2 cut(s) 185, 811
XhoI CTCGAG 1 cut(s) 1125
XmiI GTMKAC 2 cut(s) 1169, 1449
XspI CTAG 4 cut(s) 201, 371, 642, 990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.