MD12G1102400.v1.1

polyadenylate-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
OG0010442
Physical Location & Seq
Reverse (-)
16019364 .. 16023664
4301 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1102400.v1.1.491

Sequence Viewer

Length: 1935 bp
ATGGCCGTTAATAATTCCCAGACGGTGGTGGGGGCTGGGCCGACGGCGGGGGGTGTTCCTGCGGCGTCGCTGTACGTCGGAGACCTCCATCCGTACATGACCGAAGTTCAGCTGGAGGAGGCTTTCAAAGGCTTCAAGGGTGTCACGTCCGTTCGGCTCTGCAGGGACACCGCCACCGCCACCAACTGTTCTCTCTGCTATGGCTACGTCAACTTCACCACACCTGAAGAAGCAATTCGAGCTCTTGAAGTGATGAACCATTCAATTCTTAATGGAAGAGTGATAAGGGTCATGTGGTCTCATCGTGATCCCGATGCAAGAAGAAGTGGAATTGGGAACGTGTTTGTCAAGAACTTGAGCGAATCAATTAATAGTGTAGAGCTTGAAGAAATGTTTAAGAAGTTCGGACGTACTTTGTCTTGCAAAGTGGCCATGTTTGATGACGGGAAGAGTAAAGGCTATGGCTTTGTTCAGTTCGAGTCTGAGGATTCTGCGATTGCCGCTATTGAGGCGCTAAATGGCACAACTGTCAAAAACAAGCAGCTGTATGTTGCGAAATTTGTTAGAAAGAGCGATCGAGTTTTGCCCAATCCTGATATTAAATATACAAATTTGTATATGAAGAATTTGGATCCAACTCTCAAGGAAGAGCTTGTGGAGGAGAAGTTCTCTGAGTTTGGGAAAATTGTTAGCTTTGCGATTGCAAAGGACGACCATGGGAACTCTAGAGGTTTCGGTTTTGTGAACTTTGAGAACCCAGATGATGCTAGACGAGCAATGGAAGGAATGAATGGATCACAACTTGGCTCCAAGGTTCTATATGTTGCAAGGGCTCAGAAAAAGGCAGAGCGCGAGCATCTTTTGCGTTGGCAGTTTGAGGAAAAACGAAAAGAGCAAATGTTAAAATTCAAGGGATCAAATGTGTATGTGAAGAACATTGACGACGATGTCAGTGAAGAAGAGCTGGCAGAACACTTTAGTCAATGTGGTACGATTACTTCTGCAAAAATTATGCGAGACGACAAGGGAATAAGCAAGGGGTTTGGTTTTATCTGCTTCTCTACCCCTGAGGAGGGCAATAAAGCTGTGAATACTTTTCATGGATATATGTTTCATCGGAAGCCATTGTATGTGGCTATTGCCCAACGGAAAGAGGAGAGACAAGCGCAGCTGCAGCTTCAGTATGCACAGCGTTTGGCAGGATTTGCAGGTCCTTCACCAACTGTGATCCCTGGTGGATACCCTCCTATCTACTATCAAGCTCCCTCTGGGGTTGCTCCACAAGTGCCTCCTCGAGCGGGATTGATGTATCAACCTTTGGGATTGTGGCCAGGATGGAGACCCAATGGCTTTGTACCTACATCTGGACCAGCCTATCAACCACCACTGGGTCCTGTGATTCCTAATGCTCCACGACAACATAGGCAAAATAGGGGAAGAATGAACGGGCATATGATTCCTCAGGGAGGCGCATATATGCCACATTTACAACAGCCCAATCCGTTGCTACACTCTGCAAAAGATTCAAACAATCAGCAGCGGACAGGGCAGGCTAAGTCTGTTCCTAATGGGCGTCAACGAGAAATGAATAAAGGAGGAGTCTCGTCTGCTGCCTCCAATTCTGTTGGAGTTGTCGTTCAACCGGAGATGCTGAGTAGCATGCTTGCTGCCGCTTCTCCCGAGCAGCAGAAACAGATACTTGGCGAGCAGCTCTATCCACTTGTCCATAAACAAAAGGCCGACCTAGCTTCAAAGATAACTGGGATGCTACTTGAAATGGACAACTCAGAGCTGCTGAATTTATTGGAGTCACCGGACTCCTTGACTGCGAAAGTGGAAGAAGCAGTTCAGGTGCTCAGGATGTCGAAGACCAAAGTACCTAACAAAGATAACAATCATCCGAGTTATCTATCTGCTGAGGTTGCAGTCAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 ko03018 map03013 map03015 map03018
Pfam Domains
Protein Families
PABP RRM_1

Protein Analysis

645

Amino Acids

71.21

Weight (kDa)

8.95

Isoelectric Point (pI)

40.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 24 - 96 9.4e-16 RNA recognition motif
RRM_1 PF00076 114 - 182 1.2e-20 RNA recognition motif
RRM_1 PF00076 205 - 273 8.1e-21 RNA recognition motif
RRM_1 PF00076 308 - 376 3.4e-17 RNA recognition motif
MLLE PF00658 554 - 619 4e-30 MLLE domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 947
Acc36I ACCTGC 1 cut(s) 1199
AccB7I CCANNNNNTGG 1 cut(s) 25
AccBSI CCGCTC 1 cut(s) 1298
AccII CGCG 1 cut(s) 852
AciI CCGC 8 cut(s) 47, 62, 171, 177, 501, 1298, 1540, 1671
AclWI GGATC 6 cut(s) 302, 626, 639, 802, 922, 1222
AcoI YGGCCR 3 cut(s) 3, 429, 1328
AcsI RAATTY 5 cut(s) 557, 610, 625, 905, 1798
AcuI CTGAAG 2 cut(s) 246, 1163
AcyI GRCGYC 2 cut(s) 65, 1573
AfaI GTAC 6 cut(s) 74, 95, 412, 991, 1356, 1878
AfiI CCNNNNNNNGG 8 cut(s) 25, 47, 1072, 1073, 1298, 1364, 1388, 1466
AflIII ACRYGT 1 cut(s) 339
AjiI CACGTC 1 cut(s) 147
AjnI CCWGG 2 cut(s) 1231, 1330
AloI GAACNNNNNNTCC 4 cut(s) 650, 682, 1620, 1652
Alw21I GWGCWC 2 cut(s) 244, 1857
Alw26I GTCTC 6 cut(s) 75, 303, 1011, 1153, 1333, 1606
AlwI GGATC 6 cut(s) 302, 626, 639, 802, 922, 1222
Ama87I CYCGRG 2 cut(s) 1293, 1679
AoxI GGCC 5 cut(s) 3, 38, 429, 1328, 1737
ApoI RAATTY 5 cut(s) 557, 610, 625, 905, 1798
AseI ATTAAT 1 cut(s) 369
Asp700I GAANNNNTTC 2 cut(s) 234, 1845
AspLEI GCGC 4 cut(s) 514, 852, 1168, 1472
AspS9I GGNCC 4 cut(s) 38, 1211, 1367, 1391
AsuHPI GGTGA 3 cut(s) 208, 1209, 1803
AvaI CYCGRG 2 cut(s) 1293, 1679
AvaII GGWCC 3 cut(s) 1211, 1367, 1391
AxyI CCTNAGG 2 cut(s) 1068, 1461
BaeI ACNNNNGTAYC 2 cut(s) 1860, 1893
BalI TGGCCA 2 cut(s) 431, 1330
BamHI GGATCC 1 cut(s) 631
BanII GRGCYC 2 cut(s) 244, 835
BarI GAAGNNNNNNTAC 2 cut(s) 982, 1014
BbsI GAAGAC 1 cut(s) 1874
Bbv12I GWGCWC 2 cut(s) 244, 1857
BbvCI CCTCAGC 1 cut(s) 1917
BccI CCATC 2 cut(s) 96, 1329
BceAI ACGGC 1 cut(s) 60
BciT130I CCWGG 2 cut(s) 1233, 1332
BciVI GTATCC 1 cut(s) 1232
BcoDI GTCTC 6 cut(s) 75, 303, 1011, 1153, 1333, 1606
BfaI CTAG 3 cut(s) 726, 768, 1745
BfmI CTRYAG 2 cut(s) 160, 1172
BfoI RGCGCY 1 cut(s) 515
BfuAI ACCTGC 1 cut(s) 1199
BfuI GTATCC 1 cut(s) 1232
Bme1390I CCNGG 2 cut(s) 1233, 1332
Bme18I GGWCC 3 cut(s) 1211, 1367, 1391
BmeT110I CYCGRG 2 cut(s) 1293, 1679
BmgBI CACGTC 1 cut(s) 147
BmgT120I GGNCC 4 cut(s) 38, 1211, 1367, 1391
BmiI GGNNCC 3 cut(s) 633, 808, 1392
BmrFI CCNGG 2 cut(s) 1233, 1332
BmrI ACTGGG 2 cut(s) 1397, 1770
BmsI GCATC 5 cut(s) 304, 754, 865, 1638, 1755
BmuI ACTGGG 2 cut(s) 1397, 1770
BpiI GAAGAC 1 cut(s) 1874
BplI GAGNNNNNCTC 2 cut(s) 653, 685
BpmI CTGGAG 1 cut(s) 134
Bpu10I CCTNAGC 2 cut(s) 1856, 1917
BpuEI CTTGAG 2 cut(s) 376, 626
BsaBI GATNNNNATC 1 cut(s) 1893
BsaHI GRCGYC 2 cut(s) 65, 1573
BsaI GGTCTC 3 cut(s) 75, 303, 1333
BsaJI CCNNGG 3 cut(s) 715, 810, 1231
BsaWI WCCGGW 2 cut(s) 1642, 1813
BsaXI ACNNNNNCTCC 4 cut(s) 650, 680, 1620, 1650
Bsc4I CCNNNNNNNGG 8 cut(s) 25, 47, 1072, 1073, 1298, 1364, 1388, 1466
Bse1I ACTGG 2 cut(s) 1392, 1765
Bse21I CCTNAGG 2 cut(s) 1068, 1461
Bse3DI GCAATG 1 cut(s) 783
Bse8I GATNNNNATC 1 cut(s) 1893
BseBI CCWGG 2 cut(s) 1233, 1332
BseDI CCNNGG 3 cut(s) 715, 810, 1231
BseGI GGATG 5 cut(s) 88, 1340, 1770, 1866, 1897
BseJI GATNNNNATC 1 cut(s) 1893
BseLI CCNNNNNNNGG 8 cut(s) 25, 47, 1072, 1073, 1298, 1364, 1388, 1466
BseMI GCAATG 1 cut(s) 783
BseMII CTCAG 9 cut(s) 474, 663, 848, 1059, 1475, 1643, 1800, 1870, 1908
BseNI ACTGG 2 cut(s) 1392, 1765
BseRI GAGGAG 6 cut(s) 131, 674, 1085, 1169, 1281, 1611
BseYI CCCAGC 1 cut(s) 35
Bsh1236I CGCG 1 cut(s) 852
Bsh1285I CGRYCG 1 cut(s) 577
BshFI GGCC 5 cut(s) 5, 40, 431, 1330, 1739
BsiEI CGRYCG 1 cut(s) 577
BsiHKAI GWGCWC 2 cut(s) 244, 1857
BsiHKCI CYCGRG 2 cut(s) 1293, 1679
BsiSI CCGG 2 cut(s) 1643, 1814
BslFI GGGAC 1 cut(s) 179
BslI CCNNNNNNNGG 8 cut(s) 25, 47, 1072, 1073, 1298, 1364, 1388, 1466
BsmAI GTCTC 6 cut(s) 75, 303, 1011, 1153, 1333, 1606
BsmBI CGTCTC 1 cut(s) 1011
BsmFI GGGAC 1 cut(s) 179
BsnI GGCC 5 cut(s) 5, 40, 431, 1330, 1739
Bso31I GGTCTC 3 cut(s) 75, 303, 1333
BsoBI CYCGRG 2 cut(s) 1293, 1679
Bsp1286I GDGCHC 3 cut(s) 244, 835, 1857
Bsp143I GATC 6 cut(s) 307, 574, 631, 794, 914, 1227
Bsp19I CCATGG 1 cut(s) 715
BspACI CCGC 8 cut(s) 47, 62, 171, 177, 501, 1298, 1540, 1671
BspANI GGCC 5 cut(s) 5, 40, 431, 1330, 1739
BspCNI CTCAG 9 cut(s) 475, 664, 847, 1060, 1474, 1644, 1799, 1869, 1909
BspFNI CGCG 1 cut(s) 852
BspLI GGNNCC 3 cut(s) 633, 808, 1392
BspMAI CTGCAG 2 cut(s) 164, 1176
BspMI ACCTGC 1 cut(s) 1199
BspPI GGATC 6 cut(s) 302, 626, 639, 802, 922, 1222
BspQI GCTCTTC 2 cut(s) 642, 954
BspTNI GGTCTC 3 cut(s) 75, 303, 1333
BsrBI CCGCTC 1 cut(s) 1298
BsrDI GCAATG 1 cut(s) 783
BsrI ACTGG 2 cut(s) 1392, 1765
BssECI CCNNGG 3 cut(s) 715, 810, 1231
BssMI GATC 6 cut(s) 307, 574, 631, 794, 914, 1227
BssNI GRCGYC 2 cut(s) 65, 1573
BssT1I CCWWGG 2 cut(s) 715, 810
Bst2UI CCWGG 2 cut(s) 1233, 1332
Bst4CI ACNGT 4 cut(s) 25, 188, 529, 1225
Bst6I CTCTTC 4 cut(s) 271, 443, 642, 954
BstACI GRCGYC 2 cut(s) 65, 1573
BstAPI GCANNNNNTGC 2 cut(s) 862, 1205
BstC8I GCNNGC 6 cut(s) 854, 966, 1551, 1661, 1665, 1706
BstDSI CCRYGG 1 cut(s) 715
BstENI CCTNNNNNAGG 1 cut(s) 1464
BstF5I GGATG 5 cut(s) 88, 1340, 1770, 1866, 1897
BstFNI CGCG 1 cut(s) 852
BstH2I RGCGCY 1 cut(s) 515
BstHHI GCGC 4 cut(s) 514, 852, 1168, 1472
BstKTI GATC 6 cut(s) 310, 577, 634, 797, 917, 1230
BstMAI GTCTC 6 cut(s) 75, 303, 1011, 1153, 1333, 1606
BstMBI GATC 6 cut(s) 307, 574, 631, 794, 914, 1227
BstMCI CGRYCG 1 cut(s) 577
BstNI CCWGG 2 cut(s) 1233, 1332
BstNSI RCATGY 1 cut(s) 1663
BstSCI CCNGG 2 cut(s) 1231, 1330
BstSFI CTRYAG 2 cut(s) 160, 1172
BstUI CGCG 1 cut(s) 852
BstV2I GAAGAC 1 cut(s) 1874
BstX2I RGATCY 1 cut(s) 631
BstYI RGATCY 1 cut(s) 631
Bsu36I CCTNAGG 2 cut(s) 1068, 1461
BsuI GTATCC 1 cut(s) 1232
BsuRI GGCC 5 cut(s) 5, 40, 431, 1330, 1739
BtgI CCRYGG 1 cut(s) 715
BtrI CACGTC 1 cut(s) 147
BtsCI GGATG 5 cut(s) 88, 1340, 1770, 1866, 1897
BtsIMutI CAGTG 2 cut(s) 958, 1385
BveI ACCTGC 1 cut(s) 1199
Cac8I GCNNGC 6 cut(s) 854, 966, 1551, 1661, 1665, 1706
CfoI GCGC 4 cut(s) 514, 852, 1168, 1472
Cfr13I GGNCC 4 cut(s) 38, 1211, 1367, 1391
CseI GACGC 2 cut(s) 54, 1562
Csp6I GTAC 6 cut(s) 73, 94, 411, 990, 1355, 1877
CviAII CATG 6 cut(s) 97, 292, 433, 716, 1100, 1660
CviQI GTAC 6 cut(s) 73, 94, 411, 990, 1355, 1877
DpnI GATC 6 cut(s) 309, 576, 633, 796, 916, 1229
DpnII GATC 6 cut(s) 307, 574, 631, 794, 914, 1227
DrdI GACNNNNNNGTC 1 cut(s) 947
DseDI GACNNNNNNGTC 1 cut(s) 947
EaeI YGGCCR 3 cut(s) 3, 429, 1328
Eam1104I CTCTTC 4 cut(s) 271, 443, 642, 954
EarI CTCTTC 4 cut(s) 271, 443, 642, 954
Ecl136II GAGCTC 1 cut(s) 242
Eco130I CCWWGG 2 cut(s) 715, 810
Eco24I GRGCYC 2 cut(s) 244, 835
Eco31I GGTCTC 3 cut(s) 75, 303, 1333
Eco47I GGWCC 3 cut(s) 1211, 1367, 1391
Eco53kI GAGCTC 1 cut(s) 242
Eco57I CTGAAG 2 cut(s) 246, 1163
Eco81I CCTNAGG 2 cut(s) 1068, 1461
Eco88I CYCGRG 2 cut(s) 1293, 1679
EcoICRI GAGCTC 1 cut(s) 242
EcoNI CCTNNNNNAGG 1 cut(s) 1464
EcoO109I RGGNCCY 2 cut(s) 1211, 1391
EcoRII CCWGG 2 cut(s) 1231, 1330
EcoT14I CCWWGG 2 cut(s) 715, 810
EcoT38I GRGCYC 2 cut(s) 244, 835
ErhI CCWWGG 2 cut(s) 715, 810
Esp3I CGTCTC 1 cut(s) 1011
FaeI CATG 6 cut(s) 100, 295, 436, 719, 1103, 1663
FaqI GGGAC 1 cut(s) 179
FatI CATG 6 cut(s) 96, 291, 432, 715, 1099, 1659
FauI CCCGC 2 cut(s) 40, 1291
FauNDI CATATG 1 cut(s) 1452
FokI GGATG 5 cut(s) 75, 1347, 1777, 1873, 1884
FriOI GRGCYC 2 cut(s) 244, 835
FspBI CTAG 3 cut(s) 726, 768, 1745
GlaI GCGC 4 cut(s) 513, 851, 1167, 1471
GsaI CCCAGC 1 cut(s) 39
GsuI CTGGAG 1 cut(s) 134
HaeII RGCGCY 1 cut(s) 515
HaeIII GGCC 5 cut(s) 5, 40, 431, 1330, 1739
HapII CCGG 2 cut(s) 1643, 1814
HgaI GACGC 2 cut(s) 54, 1562
HhaI GCGC 4 cut(s) 514, 852, 1168, 1472
Hin1I GRCGYC 2 cut(s) 65, 1573
Hin1II CATG 6 cut(s) 100, 295, 436, 719, 1103, 1663
Hin6I GCGC 4 cut(s) 512, 850, 1166, 1470
HinP1I GCGC 4 cut(s) 512, 850, 1166, 1470
HincII GTYRAC 2 cut(s) 211, 1577
HindII GTYRAC 2 cut(s) 211, 1577
HinfI GANTC 9 cut(s) 362, 479, 488, 1399, 1456, 1523, 1599, 1808, 1817
HpaII CCGG 2 cut(s) 1643, 1814
HphI GGTGA 3 cut(s) 208, 1209, 1803
Hpy166II GTNNAC 3 cut(s) 211, 745, 1577
Hpy188I TCNGA 8 cut(s) 80, 407, 484, 673, 837, 1119, 1789, 1902
Hpy188III TCNNGA 9 cut(s) 245, 305, 311, 349, 593, 726, 1365, 1679, 1858
Hpy8I GTNNAC 3 cut(s) 211, 745, 1577
Hpy99I CGWCG 4 cut(s) 46, 70, 80, 947
HpyAV CCTTC 2 cut(s) 776, 1224
HpyCH4III ACNGT 4 cut(s) 25, 188, 529, 1225
HpyCH4IV ACGT 5 cut(s) 75, 146, 207, 339, 409
HpySE526I ACGT 5 cut(s) 75, 146, 207, 339, 409
Hsp92I GRCGYC 2 cut(s) 65, 1573
Hsp92II CATG 6 cut(s) 100, 295, 436, 719, 1103, 1663
HspAI GCGC 4 cut(s) 512, 850, 1166, 1470
Kzo9I GATC 6 cut(s) 307, 574, 631, 794, 914, 1227
LguI GCTCTTC 2 cut(s) 642, 954
LmnI GCTCC 4 cut(s) 812, 1267, 1282, 1414
LweI GCATC 5 cut(s) 304, 754, 865, 1638, 1755
MaeI CTAG 3 cut(s) 726, 768, 1745
MaeII ACGT 5 cut(s) 75, 146, 207, 339, 409
MaeIII GTNAC 2 cut(s) 142, 1809
MalI GATC 6 cut(s) 309, 576, 633, 796, 916, 1229
MbiI CCGCTC 1 cut(s) 1298
MboI GATC 6 cut(s) 307, 574, 631, 794, 914, 1227
MfeI CAATTG 1 cut(s) 1930
MflI RGATCY 1 cut(s) 631
MhlI GDGCHC 3 cut(s) 244, 835, 1857
MlsI TGGCCA 2 cut(s) 431, 1330
MluNI TGGCCA 2 cut(s) 431, 1330
MlyI GAGTC 4 cut(s) 488, 1608, 1811, 1817
MmeI TCCRAC 3 cut(s) 58, 659, 1606
Mox20I TGGCCA 2 cut(s) 431, 1330
MroXI GAANNNNTTC 2 cut(s) 234, 1845
MscI TGGCCA 2 cut(s) 431, 1330
MseI TTAA 6 cut(s) 9, 270, 369, 396, 600, 902
Msp20I TGGCCA 2 cut(s) 431, 1330
MspA1I CMGCKG 4 cut(s) 112, 544, 1171, 1540
MspI CCGG 2 cut(s) 1643, 1814
MspR9I CCNGG 2 cut(s) 1233, 1332
MunI CAATTG 1 cut(s) 1930
MvaI CCWGG 2 cut(s) 1233, 1332
MvnI CGCG 1 cut(s) 852
NcoI CCATGG 1 cut(s) 715
NdeI CATATG 1 cut(s) 1452
NdeII GATC 6 cut(s) 307, 574, 631, 794, 914, 1227
NlaIII CATG 6 cut(s) 100, 295, 436, 719, 1103, 1663
NlaIV GGNNCC 3 cut(s) 633, 808, 1392
NmuCI GTSAC 2 cut(s) 142, 1809
NspI RCATGY 1 cut(s) 1663
PaeI GCATGC 1 cut(s) 1663
PaeR7I CTCGAG 1 cut(s) 1293
PciSI GCTCTTC 2 cut(s) 642, 954
PdmI GAANNNNTTC 2 cut(s) 234, 1845
PfeI GAWTC 5 cut(s) 362, 488, 1399, 1456, 1523
PflFI GACNNNGTC 1 cut(s) 947
PflMI CCANNNNNTGG 1 cut(s) 25
Ple19I CGATCG 1 cut(s) 577
PleI GAGTC 4 cut(s) 487, 1607, 1811, 1816
PpsI GAGTC 4 cut(s) 487, 1607, 1811, 1816
PpuMI RGGWCCY 2 cut(s) 1211, 1391
PshBI ATTAAT 1 cut(s) 369
Psp124BI GAGCTC 1 cut(s) 244
Psp5II RGGWCCY 2 cut(s) 1211, 1391
Psp6I CCWGG 2 cut(s) 1231, 1330
PspFI CCCAGC 1 cut(s) 35
PspGI CCWGG 2 cut(s) 1231, 1330
PspN4I GGNNCC 3 cut(s) 633, 808, 1392
PspPI GGNCC 4 cut(s) 38, 1211, 1367, 1391
PspPPI RGGWCCY 2 cut(s) 1211, 1391
PspXI VCTCGAGB 1 cut(s) 1293
PstI CTGCAG 2 cut(s) 164, 1176
PsuI RGATCY 1 cut(s) 631
PsyI GACNNNGTC 1 cut(s) 947
PvuI CGATCG 1 cut(s) 577
PvuII CAGCTG 3 cut(s) 112, 544, 1171
RsaI GTAC 6 cut(s) 74, 95, 412, 991, 1356, 1878
RsaNI GTAC 6 cut(s) 73, 94, 411, 990, 1355, 1877
SacI GAGCTC 1 cut(s) 244
SapI GCTCTTC 2 cut(s) 642, 954
SaqAI TTAA 6 cut(s) 9, 270, 369, 396, 600, 902
Sau3AI GATC 6 cut(s) 307, 574, 631, 794, 914, 1227
Sau96I GGNCC 4 cut(s) 38, 1211, 1367, 1391
SchI GAGTC 4 cut(s) 488, 1608, 1811, 1817
ScrFI CCNGG 2 cut(s) 1233, 1332
SduI GDGCHC 3 cut(s) 244, 835, 1857
SfaNI GCATC 5 cut(s) 304, 754, 865, 1638, 1755
SfcI CTRYAG 2 cut(s) 160, 1172
Sfr274I CTCGAG 1 cut(s) 1293
SinI GGWCC 3 cut(s) 1211, 1367, 1391
SlaI CTCGAG 1 cut(s) 1293
SmlI CTYRAG 3 cut(s) 355, 641, 1293
SmoI CTYRAG 3 cut(s) 355, 641, 1293
SphI GCATGC 1 cut(s) 1663
SsiI CCGC 8 cut(s) 47, 62, 171, 177, 501, 1298, 1540, 1671
SspMI CTAG 3 cut(s) 726, 768, 1745
SstI GAGCTC 1 cut(s) 244
StyD4I CCNGG 2 cut(s) 1231, 1330
StyI CCWWGG 2 cut(s) 715, 810
TaaI ACNGT 4 cut(s) 25, 188, 529, 1225
TaiI ACGT 5 cut(s) 78, 149, 210, 342, 412
TaqI TCGA 5 cut(s) 238, 477, 577, 1294, 1865
TaqII GACCGA 1 cut(s) 116
TauI GCSGC 3 cut(s) 65, 503, 1673
TfiI GAWTC 5 cut(s) 362, 488, 1399, 1456, 1523
Tru1I TTAA 6 cut(s) 9, 270, 369, 396, 600, 902
Tru9I TTAA 6 cut(s) 9, 270, 369, 396, 600, 902
TscAI CASTG 2 cut(s) 958, 1392
TseFI GTSAC 2 cut(s) 142, 1809
Tsp45I GTSAC 2 cut(s) 142, 1809
TspDTI ATGAA 7 cut(s) 269, 635, 803, 1088, 1103, 1457, 1601
TspGWI ACGGA 4 cut(s) 81, 139, 1162, 1491
TspRI CASTG 2 cut(s) 958, 1392
Tth111I GACNNNGTC 1 cut(s) 947
Van91I CCANNNNNTGG 1 cut(s) 25
VpaK11BI GGWCC 3 cut(s) 1211, 1367, 1391
VspI ATTAAT 1 cut(s) 369
XagI CCTNNNNNAGG 1 cut(s) 1464
XapI RAATTY 5 cut(s) 557, 610, 625, 905, 1798
XbaI TCTAGA 1 cut(s) 725
XceI RCATGY 1 cut(s) 1663
XhoI CTCGAG 1 cut(s) 1293
XmnI GAANNNNTTC 2 cut(s) 234, 1845
XspI CTAG 3 cut(s) 726, 768, 1745
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.