MD14G1096300.v1.1

polyadenylate-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0010442
Physical Location & Seq
Reverse (-)
14619766 .. 14623940
4175 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1096300.v1.1.491

Sequence Viewer

Length: 1938 bp
ATGGCCGTTAACAATTCTCAGACGGTGGTGGGGGGTGGGCTGACGGCGGGGGGTGTGCCGGCGGCGTCGCTTTACGTCGGAGACCTCCATCCGTACATGACCGAAGGTCAGCTGGAGGAGGCTTTCAAAGGCTTCAAAGGTGTCACGTCCGTACGGCTCTGCAGGGACACCGCCACCGCCACCAACCGTTCTCTCCGCTATGGCTACGTCAACTTCACCACGCCTGAAGAAGCAATTCGAGCCATGGAGGTGATGAACCATTCAATGCTGCATGGAAGAGTGATAAGGGTCATGTGGTCACATCGTGATCCCGATGCAAGGAAAAGTGGAATTGGGAATGTGTTTGTCAAGAACTTGAGCGAATCGATTAATAGTGTAGAGCTTGAAGAAATGTTTAAGAAGTTCGGACGTACTTTGTCTTGCAAATTGGCCATGTTTGAAGATGGGAAGAGTAAAGGTTATGGCTTTGTTCAGTTTGAGTCTGAGGAATCTGCGATTGCCGCTATTGAGAAGCTAAATGGCACCACTGTCGGAAATAAGCAGCTGTATGTGTATGTTGCGAAATTTGTTAGAAAGAGCGATCGGGTTTTGCCCAACCCTGGTGTTAAATATACAAATTTGTACATGAAGAATTTGGATCCAACTCTCAAGGAAGAGCTTGTGGAAGAGAAGTTCTCTGAATTTGGGAAAACTGTTAGCTTCGCAATTGCGAAGGATGACCATGGGAATTCTAGAGGTTTTGGTTTTGTGAACTTCGAGAACCCAGATGATGCTAGACGAGCAATGGAAGGAATGAATGGATCACAACTTGGCTCCAAGGTTCTGTATGTTGCAAGGGCACAGAAAAAGGCAGAGCGCGAGCATATTTTGCGTTGGCAGTTTGAGGAAAAACGAAAGGAGCAAATGTTGAAGTTCAAGGGATCAAATGTCTATGTGAAGAACATTGACGATGATGTCAGTGATGAAGAGCTGGTAGGACACTTTAGTCAGTGTGGAATGATTACTTCTGCAAAGATTATGCGAGACGACAAAGGAATAAGCAAGGGGTTTGGGTTTGTTTGCTTTTCTACCCCTGAGGAGGGCAACAAAGCTGTGAATACTTTTCATGGATACATGTTTCGTCGGAAGCCATTGTATGTGGCTATTGCTCAACTAAAAGAGGAAAGACACGCACAGCTGCAGCTTCAGTATGCACAGCGTATGGCAGGATTTGTGGGTCCTTCCACAACTGTCATCCCTGGTGGATACCCTCCTTTCTACTACCAAGCACCCTCTGGGGTTGTTCCACAAGTGCCTCCTCGACCGGGACTGATGTATCAACCTTTGGGTTTGAGGCCAGGATGGATACCCAGTGGCTTTGTACCTACGTCCGGACCAGCCTATCAACCACCACAGGTTCCCGTAATGCCGAATGCTCCAAGACAACATAGGCAAAACAGGGGCAGAATGAATGGGCAAATGATCCCACAGGGAGGCGCATATATACCACATTTACAACAGCCCACTCAGTTGCCACACACTGCAAAAGATTCAGACAATCAGCAGCGGACGGGGCAGGCTAAGTATGTTGCTAATGAGCGTCAACGCGACATGAATAAAGGAGTCTCGTCTGCTGCTTCCAATTCTGTTGGAGTTGGGGTTCAACCAGAGATGCTGAGTAGCATGCTTGCTGCTGCTTCTCCTGAGCAGCAGAAACAGATACTTGGCCAACAGCTCTACCCACTCGTCCATAAACAAAAGCCCGACCTAGCTTCAAAGATAACTGGGATGCTACTTGAAATGGACAACTCGGAGCTGCTGAATTTATTGGAGTCACCCGACTCTTTGACTGCGAAAGTGGAAGAAGCAGTTCAGGTGCTTCAGATCTCCAAGACGAAAGTACCTAACAAAGAGAACATTCATCCAAGTTATCTTTCTGCCGAGGTTGCAGTCAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03013 ko03015 ko03018 map03013 map03015 map03018
Pfam Domains
Protein Families
PABP RRM_1

Protein Analysis

646

Amino Acids

71.56

Weight (kDa)

9.11

Isoelectric Point (pI)

42.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 24 - 96 5.4e-17 RNA recognition motif
RRM_1 PF00076 114 - 182 4.3e-21 RNA recognition motif
RRM_1 PF00076 207 - 275 6.5e-20 RNA recognition motif
RRM_1 PF00076 310 - 378 8.7e-16 RNA recognition motif
MLLE PF00658 555 - 620 1.1e-30 MLLE domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 953, 984
AccB1I GGYRCC 1 cut(s) 521
AccII CGCG 2 cut(s) 858, 1587
AccIII TCCGGA 1 cut(s) 1370
AciI CCGC 7 cut(s) 47, 62, 171, 177, 196, 501, 1546
AclWI GGATC 6 cut(s) 302, 632, 645, 808, 928, 1456
AcoI YGGCCR 3 cut(s) 3, 429, 1705
AcsI RAATTY 6 cut(s) 563, 616, 631, 680, 727, 1801
AcuI CTGAAG 3 cut(s) 246, 1169, 1844
AcyI GRCGYC 1 cut(s) 65
AdeI CACNNNGTG 1 cut(s) 305
AfaI GTAC 6 cut(s) 95, 153, 412, 623, 1362, 1881
AfiI CCNNNNNNNGG 7 cut(s) 318, 599, 1078, 1079, 1304, 1370, 1472
AflIII ACRYGT 1 cut(s) 1113
AhdI GACNNNNNGTC 1 cut(s) 105
AjiI CACGTC 1 cut(s) 147
AjnI CCWGG 3 cut(s) 598, 1237, 1336
AjuI GAANNNNNNNTTGG 2 cut(s) 1897, 1929
AloI GAACNNNNNNTCC 4 cut(s) 656, 688, 1623, 1655
Alw26I GTCTC 3 cut(s) 75, 1017, 1609
AlwI GGATC 6 cut(s) 302, 632, 645, 808, 928, 1456
Aor13HI TCCGGA 1 cut(s) 1370
AoxI GGCC 4 cut(s) 3, 429, 1334, 1705
ApoI RAATTY 6 cut(s) 563, 616, 631, 680, 727, 1801
AseI ATTAAT 1 cut(s) 369
Asp700I GAANNNNTTC 2 cut(s) 234, 1848
AspLEI GCGC 2 cut(s) 858, 1478
AspS9I GGNCC 2 cut(s) 1217, 1373
AsuC2I CCSGG 1 cut(s) 1305
AsuHPI GGTGA 3 cut(s) 208, 262, 1806
AvaII GGWCC 2 cut(s) 1217, 1373
AxyI CCTNAGG 1 cut(s) 1074
BaeGI GKGCMC 1 cut(s) 841
BaeI ACNNNNGTAYC 4 cut(s) 1298, 1331, 1863, 1896
BalI TGGCCA 2 cut(s) 431, 1707
BamHI GGATCC 1 cut(s) 637
BanI GGYRCC 1 cut(s) 521
BccI CCATC 3 cut(s) 96, 437, 1335
BceAI ACGGC 2 cut(s) 60, 170
BcgI CGANNNNNNTGC 2 cut(s) 511, 545
BciT130I CCWGG 3 cut(s) 600, 1239, 1338
BciVI GTATCC 3 cut(s) 1103, 1238, 1338
BcnI CCSGG 1 cut(s) 1305
BcoDI GTCTC 3 cut(s) 75, 1017, 1609
BfaI CTAG 3 cut(s) 732, 774, 1748
BfmI CTRYAG 2 cut(s) 160, 1178
BfuI GTATCC 3 cut(s) 1103, 1238, 1338
BglII AGATCT 1 cut(s) 1863
Bme1390I CCNGG 4 cut(s) 600, 1239, 1305, 1338
Bme18I GGWCC 2 cut(s) 1217, 1373
BmeRI GACNNNNNGTC 1 cut(s) 105
BmgBI CACGTC 1 cut(s) 147
BmgT120I GGNCC 2 cut(s) 1217, 1373
BmiI GGNNCC 5 cut(s) 523, 639, 814, 1218, 1398
BmrFI CCNGG 4 cut(s) 600, 1239, 1305, 1338
BmrI ACTGGG 2 cut(s) 1344, 1773
BmsI GCATC 4 cut(s) 304, 760, 1641, 1758
BmuI ACTGGG 2 cut(s) 1344, 1773
BplI GAGNNNNNCTC 2 cut(s) 659, 691
BpmI CTGGAG 1 cut(s) 134
Bpu10I CCTNAGC 1 cut(s) 1683
BpuEI CTTGAG 2 cut(s) 376, 632
BpuMI CCSGG 1 cut(s) 1305
Bsa29I ATCGAT 1 cut(s) 365
BsaHI GRCGYC 1 cut(s) 65
BsaI GGTCTC 1 cut(s) 75
BsaJI CCNNGG 6 cut(s) 243, 598, 721, 816, 1237, 1920
BsaWI WCCGGW 1 cut(s) 1370
BsaXI ACNNNNNCTCC 4 cut(s) 890, 920, 1623, 1653
Bsc4I CCNNNNNNNGG 7 cut(s) 318, 599, 1078, 1079, 1304, 1370, 1472
Bse118I RCCGGY 1 cut(s) 58
Bse1I ACTGG 2 cut(s) 1350, 1768
Bse21I CCTNAGG 1 cut(s) 1074
Bse3DI GCAATG 1 cut(s) 789
BseAI TCCGGA 1 cut(s) 1370
BseBI CCWGG 3 cut(s) 600, 1239, 1338
BseCI ATCGAT 1 cut(s) 365
BseDI CCNNGG 6 cut(s) 243, 598, 721, 816, 1237, 1920
BseGI GGATG 6 cut(s) 88, 721, 1233, 1346, 1773, 1900
BseLI CCNNNNNNNGG 7 cut(s) 318, 599, 1078, 1079, 1304, 1370, 1472
BseMI GCAATG 1 cut(s) 789
BseMII CTCAG 6 cut(s) 32, 474, 1065, 1520, 1646, 1674
BseNI ACTGG 2 cut(s) 1350, 1768
BseRI GAGGAG 3 cut(s) 131, 1091, 1287
BseSI GKGCMC 1 cut(s) 841
Bsh1236I CGCG 2 cut(s) 858, 1587
Bsh1285I CGRYCG 2 cut(s) 583, 1304
BshFI GGCC 4 cut(s) 5, 431, 1336, 1707
BshNI GGYRCC 1 cut(s) 521
BshVI ATCGAT 1 cut(s) 365
BsiEI CGRYCG 2 cut(s) 583, 1304
BsiSI CCGG 3 cut(s) 59, 1304, 1371
BsiWI CGTACG 1 cut(s) 151
BslFI GGGAC 2 cut(s) 179, 1320
BslI CCNNNNNNNGG 7 cut(s) 318, 599, 1078, 1079, 1304, 1370, 1472
BsmAI GTCTC 3 cut(s) 75, 1017, 1609
BsmBI CGTCTC 1 cut(s) 1017
BsmFI GGGAC 2 cut(s) 179, 1320
BsmI GAATGC 1 cut(s) 1417
BsnI GGCC 4 cut(s) 5, 431, 1336, 1707
Bso31I GGTCTC 1 cut(s) 75
Bsp1286I GDGCHC 1 cut(s) 841
Bsp13I TCCGGA 1 cut(s) 1370
Bsp1407I TGTACA 1 cut(s) 621
Bsp143I GATC 7 cut(s) 307, 580, 637, 800, 920, 1461, 1863
Bsp19I CCATGG 2 cut(s) 243, 721
BspACI CCGC 7 cut(s) 47, 62, 171, 177, 196, 501, 1546
BspANI GGCC 4 cut(s) 5, 431, 1336, 1707
BspCNI CTCAG 6 cut(s) 31, 475, 1066, 1519, 1647, 1675
BspDI ATCGAT 1 cut(s) 365
BspEI TCCGGA 1 cut(s) 1370
BspFNI CGCG 2 cut(s) 858, 1587
BspLI GGNNCC 5 cut(s) 523, 639, 814, 1218, 1398
BspMAI CTGCAG 2 cut(s) 164, 1182
BspPI GGATC 6 cut(s) 302, 632, 645, 808, 928, 1456
BspQI GCTCTTC 2 cut(s) 648, 960
BspT107I GGYRCC 1 cut(s) 521
BspTNI GGTCTC 1 cut(s) 75
BsrDI GCAATG 1 cut(s) 789
BsrFI RCCGGY 1 cut(s) 58
BsrGI TGTACA 1 cut(s) 621
BsrI ACTGG 2 cut(s) 1350, 1768
BssAI RCCGGY 1 cut(s) 58
BssECI CCNNGG 6 cut(s) 243, 598, 721, 816, 1237, 1920
BssMI GATC 7 cut(s) 307, 580, 637, 800, 920, 1461, 1863
BssNI GRCGYC 1 cut(s) 65
BssT1I CCWWGG 3 cut(s) 243, 721, 816
Bst2UI CCWGG 3 cut(s) 600, 1239, 1338
Bst4CI ACNGT 5 cut(s) 25, 188, 529, 694, 1231
Bst6I CTCTTC 5 cut(s) 271, 443, 648, 660, 960
BstACI GRCGYC 1 cut(s) 65
BstAPI GCANNNNNTGC 1 cut(s) 868
BstAUI TGTACA 1 cut(s) 621
BstC8I GCNNGC 5 cut(s) 60, 860, 1557, 1664, 1668
BstDEI CTNAG 7 cut(s) 18, 483, 1074, 1506, 1560, 1655, 1683
BstDSI CCRYGG 2 cut(s) 243, 721
BstF5I GGATG 6 cut(s) 88, 721, 1233, 1346, 1773, 1900
BstFNI CGCG 2 cut(s) 858, 1587
BstHHI GCGC 2 cut(s) 858, 1478
BstKTI GATC 7 cut(s) 310, 583, 640, 803, 923, 1464, 1866
BstMAI GTCTC 3 cut(s) 75, 1017, 1609
BstMBI GATC 7 cut(s) 307, 580, 637, 800, 920, 1461, 1863
BstMCI CGRYCG 2 cut(s) 583, 1304
BstMWI GCNNNNNNNGC 6 cut(s) 239, 500, 779, 868, 1552, 1925
BstNI CCWGG 3 cut(s) 600, 1239, 1338
BstNSI RCATGY 2 cut(s) 1117, 1666
BstSCI CCNGG 4 cut(s) 598, 1237, 1303, 1336
BstSFI CTRYAG 2 cut(s) 160, 1178
BstSLI GKGCMC 1 cut(s) 841
BstUI CGCG 2 cut(s) 858, 1587
BstX2I RGATCY 2 cut(s) 637, 1863
BstYI RGATCY 2 cut(s) 637, 1863
Bsu15I ATCGAT 1 cut(s) 365
Bsu36I CCTNAGG 1 cut(s) 1074
BsuI GTATCC 3 cut(s) 1103, 1238, 1338
BsuRI GGCC 4 cut(s) 5, 431, 1336, 1707
BsuTUI ATCGAT 1 cut(s) 365
BtgI CCRYGG 2 cut(s) 243, 721
BtrI CACGTC 1 cut(s) 147
BtsCI GGATG 6 cut(s) 88, 721, 1233, 1346, 1773, 1900
BtsI GCAGTG 1 cut(s) 1518
BtsIMutI CAGTG 5 cut(s) 525, 964, 995, 1357, 1518
Cac8I GCNNGC 5 cut(s) 60, 860, 1557, 1664, 1668
CfoI GCGC 2 cut(s) 858, 1478
Cfr10I RCCGGY 1 cut(s) 58
Cfr13I GGNCC 2 cut(s) 1217, 1373
ClaI ATCGAT 1 cut(s) 365
CseI GACGC 2 cut(s) 54, 1568
Csp6I GTAC 6 cut(s) 94, 152, 411, 622, 1361, 1880
CviQI GTAC 6 cut(s) 94, 152, 411, 622, 1361, 1880
DdeI CTNAG 7 cut(s) 18, 483, 1074, 1506, 1560, 1655, 1683
DpnI GATC 7 cut(s) 309, 582, 639, 802, 922, 1463, 1865
DpnII GATC 7 cut(s) 307, 580, 637, 800, 920, 1461, 1863
DraIII CACNNNGTG 1 cut(s) 305
DrdI GACNNNNNNGTC 2 cut(s) 953, 984
DriI GACNNNNNGTC 1 cut(s) 105
DseDI GACNNNNNNGTC 2 cut(s) 953, 984
EaeI YGGCCR 3 cut(s) 3, 429, 1705
Eam1104I CTCTTC 5 cut(s) 271, 443, 648, 660, 960
Eam1105I GACNNNNNGTC 1 cut(s) 105
EarI CTCTTC 5 cut(s) 271, 443, 648, 660, 960
Eco130I CCWWGG 3 cut(s) 243, 721, 816
Eco31I GGTCTC 1 cut(s) 75
Eco47I GGWCC 2 cut(s) 1217, 1373
Eco57I CTGAAG 3 cut(s) 246, 1169, 1844
Eco81I CCTNAGG 1 cut(s) 1074
EcoO109I RGGNCCY 1 cut(s) 1217
EcoRI GAATTC 1 cut(s) 727
EcoRII CCWGG 3 cut(s) 598, 1237, 1336
EcoT14I CCWWGG 3 cut(s) 243, 721, 816
ErhI CCWWGG 3 cut(s) 243, 721, 816
Esp3I CGTCTC 1 cut(s) 1017
FaqI GGGAC 2 cut(s) 179, 1320
FauI CCCGC 1 cut(s) 40
FokI GGATG 6 cut(s) 75, 728, 1220, 1353, 1780, 1887
FspBI CTAG 3 cut(s) 732, 774, 1748
GlaI GCGC 2 cut(s) 857, 1477
GsuI CTGGAG 1 cut(s) 134
HaeIII GGCC 4 cut(s) 5, 431, 1336, 1707
HapII CCGG 3 cut(s) 59, 1304, 1371
HgaI GACGC 2 cut(s) 54, 1568
HhaI GCGC 2 cut(s) 858, 1478
Hin1I GRCGYC 1 cut(s) 65
Hin6I GCGC 2 cut(s) 856, 1476
HinP1I GCGC 2 cut(s) 856, 1476
HincII GTYRAC 3 cut(s) 10, 211, 1583
HindII GTYRAC 3 cut(s) 10, 211, 1583
HinfI GANTC 7 cut(s) 362, 479, 488, 1529, 1602, 1811, 1820
HpaI GTTAAC 1 cut(s) 10
HpaII CCGG 3 cut(s) 59, 1304, 1371
HphI GGTGA 3 cut(s) 208, 262, 1806
Hpy166II GTNNAC 4 cut(s) 10, 211, 751, 1583
Hpy188III TCNNGA 7 cut(s) 305, 311, 349, 732, 757, 1371, 1682
Hpy8I GTNNAC 4 cut(s) 10, 211, 751, 1583
Hpy99I CGWCG 3 cut(s) 70, 80, 1125
HpyAV CCTTC 4 cut(s) 98, 706, 782, 1230
HpyCH4III ACNGT 5 cut(s) 25, 188, 529, 694, 1231
HpyCH4IV ACGT 5 cut(s) 75, 146, 207, 409, 1367
HpyF10VI GCNNNNNNNGC 6 cut(s) 239, 500, 779, 868, 1552, 1925
HpyF3I CTNAG 7 cut(s) 18, 483, 1074, 1506, 1560, 1655, 1683
HpySE526I ACGT 5 cut(s) 75, 146, 207, 409, 1367
Hsp92I GRCGYC 1 cut(s) 65
HspAI GCGC 2 cut(s) 856, 1476
Kpn2I TCCGGA 1 cut(s) 1370
KroI GCCGGC 1 cut(s) 58
KroNI GCCGGC 1 cut(s) 60
KspAI GTTAAC 1 cut(s) 10
Kzo9I GATC 7 cut(s) 307, 580, 637, 800, 920, 1461, 1863
LguI GCTCTTC 2 cut(s) 648, 960
LmnI GCTCC 4 cut(s) 818, 898, 1420, 1792
LweI GCATC 4 cut(s) 304, 760, 1641, 1758
MaeI CTAG 3 cut(s) 732, 774, 1748
MaeII ACGT 5 cut(s) 75, 146, 207, 409, 1367
MaeIII GTNAC 3 cut(s) 142, 297, 1812
MalI GATC 7 cut(s) 309, 582, 639, 802, 922, 1463, 1865
MboI GATC 7 cut(s) 307, 580, 637, 800, 920, 1461, 1863
MfeI CAATTG 2 cut(s) 705, 1933
MflI RGATCY 2 cut(s) 637, 1863
MhlI GDGCHC 1 cut(s) 841
MlsI TGGCCA 2 cut(s) 431, 1707
MluNI TGGCCA 2 cut(s) 431, 1707
MlyI GAGTC 4 cut(s) 488, 1611, 1814, 1820
MmeI TCCRAC 5 cut(s) 58, 511, 665, 1103, 1609
Mox20I TGGCCA 2 cut(s) 431, 1707
MroI TCCGGA 1 cut(s) 1370
MroNI GCCGGC 1 cut(s) 58
MroXI GAANNNNTTC 2 cut(s) 234, 1848
MscI TGGCCA 2 cut(s) 431, 1707
MseI TTAA 4 cut(s) 9, 369, 396, 606
MslI CAYNNNNRTG 1 cut(s) 248
Msp20I TGGCCA 2 cut(s) 431, 1707
MspA1I CMGCKG 4 cut(s) 112, 544, 1177, 1546
MspI CCGG 3 cut(s) 59, 1304, 1371
MspR9I CCNGG 4 cut(s) 600, 1239, 1305, 1338
MunI CAATTG 2 cut(s) 705, 1933
Mva1269I GAATGC 1 cut(s) 1417
MvaI CCWGG 3 cut(s) 600, 1239, 1338
MvnI CGCG 2 cut(s) 858, 1587
MwoI GCNNNNNNNGC 6 cut(s) 239, 500, 779, 868, 1552, 1925
NaeI GCCGGC 1 cut(s) 60
NciI CCSGG 1 cut(s) 1305
NcoI CCATGG 2 cut(s) 243, 721
NdeII GATC 7 cut(s) 307, 580, 637, 800, 920, 1461, 1863
NgoMIV GCCGGC 1 cut(s) 58
NlaIV GGNNCC 5 cut(s) 523, 639, 814, 1218, 1398
NmuCI GTSAC 3 cut(s) 142, 297, 1812
NspI RCATGY 2 cut(s) 1117, 1666
PaeI GCATGC 1 cut(s) 1666
PciI ACATGT 1 cut(s) 1113
PciSI GCTCTTC 2 cut(s) 648, 960
PctI GAATGC 1 cut(s) 1417
PdiI GCCGGC 1 cut(s) 60
PdmI GAANNNNTTC 2 cut(s) 234, 1848
PfeI GAWTC 3 cut(s) 362, 488, 1529
Pfl23II CGTACG 1 cut(s) 151
Ple19I CGATCG 1 cut(s) 583
PleI GAGTC 4 cut(s) 487, 1610, 1814, 1819
PpsI GAGTC 4 cut(s) 487, 1610, 1814, 1819
PpuMI RGGWCCY 1 cut(s) 1217
PscI ACATGT 1 cut(s) 1113
PshBI ATTAAT 1 cut(s) 369
Psp5II RGGWCCY 1 cut(s) 1217
Psp6I CCWGG 3 cut(s) 598, 1237, 1336
PspGI CCWGG 3 cut(s) 598, 1237, 1336
PspLI CGTACG 1 cut(s) 151
PspN4I GGNNCC 5 cut(s) 523, 639, 814, 1218, 1398
PspPI GGNCC 2 cut(s) 1217, 1373
PspPPI RGGWCCY 1 cut(s) 1217
PstI CTGCAG 2 cut(s) 164, 1182
PsuI RGATCY 2 cut(s) 637, 1863
PvuI CGATCG 1 cut(s) 583
PvuII CAGCTG 3 cut(s) 112, 544, 1177
RsaI GTAC 6 cut(s) 95, 153, 412, 623, 1362, 1881
RsaNI GTAC 6 cut(s) 94, 152, 411, 622, 1361, 1880
RseI CAYNNNNRTG 1 cut(s) 248
SapI GCTCTTC 2 cut(s) 648, 960
SaqAI TTAA 4 cut(s) 9, 369, 396, 606
Sau3AI GATC 7 cut(s) 307, 580, 637, 800, 920, 1461, 1863
Sau96I GGNCC 2 cut(s) 1217, 1373
SchI GAGTC 4 cut(s) 488, 1611, 1814, 1820
ScrFI CCNGG 4 cut(s) 600, 1239, 1305, 1338
SduI GDGCHC 1 cut(s) 841
SfaNI GCATC 4 cut(s) 304, 760, 1641, 1758
SfcI CTRYAG 2 cut(s) 160, 1178
SinI GGWCC 2 cut(s) 1217, 1373
SmiMI CAYNNNNRTG 1 cut(s) 248
SmlI CTYRAG 2 cut(s) 355, 647
SmoI CTYRAG 2 cut(s) 355, 647
SphI GCATGC 1 cut(s) 1666
SsiI CCGC 7 cut(s) 47, 62, 171, 177, 196, 501, 1546
SspMI CTAG 3 cut(s) 732, 774, 1748
StyD4I CCNGG 4 cut(s) 598, 1237, 1303, 1336
StyI CCWWGG 3 cut(s) 243, 721, 816
TaaI ACNGT 5 cut(s) 25, 188, 529, 694, 1231
TaiI ACGT 5 cut(s) 78, 149, 210, 412, 1370
TaqI TCGA 4 cut(s) 238, 365, 756, 1300
TaqII GACCGA 1 cut(s) 116
TatI WGTACW 1 cut(s) 621
TauI GCSGC 2 cut(s) 65, 503
TfiI GAWTC 3 cut(s) 362, 488, 1529
Tru1I TTAA 4 cut(s) 9, 369, 396, 606
Tru9I TTAA 4 cut(s) 9, 369, 396, 606
TscAI CASTG 5 cut(s) 532, 964, 995, 1357, 1525
TseFI GTSAC 3 cut(s) 142, 297, 1812
Tsp45I GTSAC 3 cut(s) 142, 297, 1812
TspDTI ATGAA 8 cut(s) 269, 641, 809, 978, 1094, 1463, 1607, 1889
TspGWI ACGGA 2 cut(s) 81, 139
TspRI CASTG 5 cut(s) 532, 964, 995, 1357, 1525
VpaK11BI GGWCC 2 cut(s) 1217, 1373
VspI ATTAAT 1 cut(s) 369
XapI RAATTY 6 cut(s) 563, 616, 631, 680, 727, 1801
XbaI TCTAGA 1 cut(s) 731
XceI RCATGY 2 cut(s) 1117, 1666
XcmI CCANNNNNNNNNTGG 1 cut(s) 1271
XmnI GAANNNNTTC 2 cut(s) 234, 1848
XspI CTAG 3 cut(s) 732, 774, 1748
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.