Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0010442

Physical Location & Seq

Genomic Coordinates Reverse (-)

32443461 .. 32447899

Gene Structure 4439 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00409960.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1908 bp

ATGGAGGTACCGCAGACTCCGGCGACGGCGCTGGCCGTGATGGCGTCTCTGTACGTCGGAGACCTCAGCCCCTACATCACCGAGACCGAACTCTACGAGGCGTTCAACAACGAGAAAAAGACCCTTGCGTCCGTTAGGGTGTGCAGGGACACCAACACCGGCCGGTCTCTCTGCTACGGCTACGTCAACTTTTCTAACACCGACGACGCAATTCGAGCCATTGAACAGAAGAATAACACTGTTCTGCATGGAAGAGTGATAAGGGTCATGTGGTCTCATCGTGATCCTGATGCCAGGAGAAGTGGAATTGGGAATGTGTTTGTCAAGAACTTGAGCGAAGGGATTGATAATGTAGGGCTCCAAGATATGTTTAGGAAATTTGGAAATGTTTTGTCTTGCAAAGTTGCCATGTTTGAGGATGGGAAGAGTAAAGGCTATGGCTTTGTTCAGTTGGAGTCTGAGGAATCAGCAATTGCTGCTATTGACAAGCTAAATGGCTCTACAGTCGGAGACAAGCAATTGTATGTCGCAAAGTTTGTTAGAAAGAGTGATCGAGTTTTGCCCAATCCTGATGTGAAATATACAAATGTGTATGTGAAGAATTTGGATCCAAATGTCAGGGAAGAGCTTCTGGAAGAAAAGTTCTCTGAGTTCGGGAAAATTATAAGCTTTGCAATAGCAAGGGATGAAAATGGAATTTCTAGAGGTTTTGGCTTTGTGAACTTTGAGAGCCCGGATGATGCTAGAAAAGCATTGGAATCTCTGAATGGAACTCAACTTGGTTCCAAGGTTCTGTATGTAGCGAGAGCACAGAAGAAGGCAGAGCGTGAACAAATTTTGCGTCGTCAGTTTGAAGAAAAACGGAAGGAGCAAATGTTAAAATTCAAGGGATCAAACGTGTATGTGAAGAACATTGATGATGATGTCACTGATGAAGAGCTCATAGACCACTTCAGTCAATGTGGCATGATTACTTCTGCAAAAATTATGAGAGATGAGAAAGGAATAAGCAAGGGCTTTGGTTTTGTTTGCTTCTCTAGCCCCGAGGAGGGCAATAAAGCTGTGATTACATTTCATGGATATATGTTTCATCGGAAGCCATTGTATGTCGCTATTGCTCAAAGGAAAGAAGAAAGACAAGCACAGCTGCAACTTCAGTATGCACAGCGTATGGCAGGATTTGCTGGTCCTTCAACAGCTGTCATCCCTGGTGGATACCCTCCTATCTACTATCAGGCTCCATCTGGTGTTGTTCCATCAGTGCCTCCTCGACCAGGGATGATGTATCAGCCTTTGGGATTGAGGCCAGGATGGAGACCTAATGGCTTTGCACCTACCTCTGGACCAGGTTATCAACCGCCACCTGTTCCTGTTATGTCCAATACTCCAAGGCAGCATAGGCAAAACAGGGGCAGAATAAATGGGCATATGCTTCCTCAGGGAGGTCCATTTATTCCACATTTGCAACAGTCAACTCACTCCTCGAAGGAGTCAAACAGTCAGCAGCGTTCGGGGCAGCCTAAGTATGTTCCTAATGGGCGTCAACGTGACATGAATAAAGGATCAGGAGTCTCATCTACTGCTTCCAATTCTGTTGGAGGTGGGTCTCAGGGACCAGAGATGCTGAGTAGTATGCTTGCTGCTGCTTCTCCTGAGCAGCAGAAACAGATACTTGGCGAGCGTCTCTTCCCACTAGTTCTTAAACACAAGCCGGATCTTGCTTCAAAAATTACCGGGATGCTACTGGAGATGGACAACTCAGAACTGCTGCTTTTGTTGGAGTCTCCTGAGAGTTTGGCTGCCAAAGTGGGAGAAGCTGTTCAGGTCCTCAAGATCTCCAAGACTAAAGTATCTAGCAAAGATTCCCTTCATTCTAGTTACCTTTCTGCTGAGGTTGCAGTCAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03013 ko03015 ko03018 map03013 map03015 map03018

Pfam Domains

Protein Families

PABP RRM_1

Protein Analysis

635

Amino Acids

70.2

Weight (kDa)

9.16

Isoelectric Point (pI)

41.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	17 - 88	7.6e-16	RNA recognition motif
RRM_1	PF00076	106 - 174	3e-18	RNA recognition motif
RRM_1	PF00076	197 - 265	1e-22	RNA recognition motif
RRM_1	PF00076	300 - 368	2.7e-16	RNA recognition motif
MLLE	PF00658	545 - 610	4e-29	MLLE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010442)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36660
fragaria_vesca	FvH4_6g17300 FvH4_6g17300
malus_domestica	MD12G1102400.v1.1 MD14G1096300.v1.1
prunus_persica	Prupe.7G122400_v2.0.a1 Prupe.7G122400_v2.0.a1
pyrus_communis	pycom12g10040
rosa_chinensis	RchiOBHm_Chr3g0471421
rosa_laevigata	RLG00000024179
rosa_multiflora	Rmu_sc0006582.1_g000012 Rmu_sc0006582.1_g000013
rosa_roxburghii	Rroxscaffold_6G00409960
rosa_rugosa	Rorug03G0117700
rosa_samantha	Rh2BG190900 Rh2CG185900 Rh3AG167500 Rh3BG193000 Rh3CG183400 Rh3DG182500
rosa_wichuraiana	Rw3G015780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	665
AasI	GACNNNNNNGTC	1 cut(s)	127
Acc65I	GGTACC	1 cut(s)	7
AccB1I	GGYRCC	1 cut(s)	7
AciI	CCGC	2 cut(s)	11, 1358
AclWI	GGATC	6 cut(s)	278, 602, 615, 898, 1570, 1722
AcoI	YGGCCR	2 cut(s)	33, 160
AcsI	RAATTY	5 cut(s)	377, 601, 696, 834, 881
AcuI	CTGAAG	2 cut(s)	937, 1139
AcyI	GRCGYC	2 cut(s)	44, 1540
AfaI	GTAC	2 cut(s)	9, 53
AfiI	CCNNNNNNNGG	5 cut(s)	1048, 1049, 1274, 1340, 1442
AflIII	ACRYGT	1 cut(s)	897
AgsI	TTSAA	6 cut(s)	106, 224, 854, 886, 1194, 1725
AhlI	ACTAGT	1 cut(s)	1693
AjnI	CCWGG	5 cut(s)	293, 1207, 1273, 1306, 1345
AloI	GAACNNNNNNTCC	4 cut(s)	626, 658, 1803, 1835
AluBI	AGCT	8 cut(s)	490, 628, 669, 940, 1061, 1147, 1199, 1817
AluI	AGCT	8 cut(s)	490, 628, 669, 940, 1061, 1147, 1199, 1817
Alw21I	GWGCWC	2 cut(s)	811, 942
AlwI	GGATC	6 cut(s)	278, 602, 615, 898, 1570, 1722
Ama87I	CYCGRG	1 cut(s)	1043
AoxI	GGCC	3 cut(s)	33, 160, 1304
ApoI	RAATTY	5 cut(s)	377, 601, 696, 834, 881
ArsI	GACNNNNNNTTYG	2 cut(s)	826, 858
Asp700I	GAANNNNTTC	2 cut(s)	627, 1818
Asp718I	GGTACC	1 cut(s)	7
AspLEI	GCGC	1 cut(s)	31
AspS9I	GGNCC	5 cut(s)	1187, 1343, 1445, 1613, 1825
AsuC2I	CCSGG	2 cut(s)	734, 1735
AsuHPI	GGTGA	1 cut(s)	70
AvaI	CYCGRG	1 cut(s)	1043
AvaII	GGWCC	5 cut(s)	1187, 1343, 1445, 1613, 1825
AxyI	CCTNAGG	1 cut(s)	1437
BaeI	ACNNNNGTAYC	2 cut(s)	1833, 1866
BamHI	GGATCC	1 cut(s)	607
BanI	GGYRCC	1 cut(s)	7
BanII	GRGCYC	3 cut(s)	360, 734, 942
Bbv12I	GWGCWC	2 cut(s)	811, 942
BbvCI	CCTCAGC	2 cut(s)	65, 1890
BccI	CCATC	6 cut(s)	34, 413, 1249, 1264, 1305, 1744
BceAI	ACGGC	3 cut(s)	20, 42, 193
BciT130I	CCWGG	5 cut(s)	295, 1209, 1275, 1308, 1347
BciVI	GTATCC	1 cut(s)	1208
BcnI	CCSGG	2 cut(s)	734, 1735
BcuI	ACTAGT	1 cut(s)	1693
BfaI	CTAG	6 cut(s)	702, 744, 1038, 1694, 1854, 1875
BfmI	CTRYAG	1 cut(s)	501
BfoI	RGCGCY	1 cut(s)	32
BfuI	GTATCC	1 cut(s)	1208
BglI	GCCNNNNNGGC	1 cut(s)	41
BglII	AGATCT	1 cut(s)	1833
Bme1390I	CCNGG	7 cut(s)	295, 734, 1209, 1275, 1308, 1347, 1735
Bme18I	GGWCC	5 cut(s)	1187, 1343, 1445, 1613, 1825
BmeT110I	CYCGRG	1 cut(s)	1043
BmgT120I	GGNCC	5 cut(s)	1187, 1343, 1445, 1613, 1825
BmiI	GGNNCC	6 cut(s)	9, 359, 609, 784, 1239, 1614
BmrFI	CCNGG	7 cut(s)	295, 734, 1209, 1275, 1308, 1347, 1735
BmsI	GCATC	4 cut(s)	280, 730, 1611, 1728
BpmI	CTGGAG	1 cut(s)	1766
Bpu10I	CCTNAGC	3 cut(s)	65, 1653, 1890
BpuEI	CTTGAG	2 cut(s)	352, 1814
BpuMI	CCSGG	2 cut(s)	734, 1735
BsaHI	GRCGYC	2 cut(s)	44, 1540
BsaI	GGTCTC	6 cut(s)	54, 77, 171, 279, 1309, 1611
BsaJI	CCNNGG	5 cut(s)	786, 1044, 1207, 1274, 1388
BsaXI	ACNNNNNCTCC	4 cut(s)	860, 890, 1803, 1833
Bsc4I	CCNNNNNNNGG	5 cut(s)	1048, 1049, 1274, 1340, 1442
Bse118I	RCCGGY	2 cut(s)	158, 162
Bse1I	ACTGG	1 cut(s)	1749
Bse21I	CCTNAGG	1 cut(s)	1437
BseBI	CCWGG	5 cut(s)	295, 1209, 1275, 1308, 1347
BseDI	CCNNGG	5 cut(s)	786, 1044, 1207, 1274, 1388
BseGI	GGATG	7 cut(s)	424, 691, 742, 1203, 1284, 1316, 1743
BseLI	CCNNNNNNNGG	5 cut(s)	1048, 1049, 1274, 1340, 1442
BseNI	ACTGG	1 cut(s)	1749
BseRI	GAGGAG	3 cut(s)	1061, 1257, 1471
BseX3I	CGGCCG	1 cut(s)	160
BsgI	GTGCAG	1 cut(s)	163
Bsh1285I	CGRYCG	1 cut(s)	163
BshFI	GGCC	3 cut(s)	35, 162, 1306
BshNI	GGYRCC	1 cut(s)	7
BsiEI	CGRYCG	1 cut(s)	163
BsiHKAI	GWGCWC	2 cut(s)	811, 942
BsiHKCI	CYCGRG	1 cut(s)	1043
BsiSI	CCGG	6 cut(s)	20, 159, 163, 734, 1712, 1734
BslFI	GGGAC	2 cut(s)	161, 1626
BslI	CCNNNNNNNGG	5 cut(s)	1048, 1049, 1274, 1340, 1442
BsmBI	CGTCTC	2 cut(s)	51, 1688
BsmFI	GGGAC	2 cut(s)	161, 1626
BsnI	GGCC	3 cut(s)	35, 162, 1306
Bso31I	GGTCTC	6 cut(s)	54, 77, 171, 279, 1309, 1611
BsoBI	CYCGRG	1 cut(s)	1043
Bsp1286I	GDGCHC	4 cut(s)	360, 734, 811, 942
Bsp143I	GATC	7 cut(s)	283, 550, 607, 890, 1562, 1714, 1833
BspACI	CCGC	2 cut(s)	11, 1358
BspANI	GGCC	3 cut(s)	35, 162, 1306
BspLI	GGNNCC	6 cut(s)	9, 359, 609, 784, 1239, 1614
BspPI	GGATC	6 cut(s)	278, 602, 615, 898, 1570, 1722
BspQI	GCTCTTC	2 cut(s)	618, 930
BspT107I	GGYRCC	1 cut(s)	7
BspTNI	GGTCTC	6 cut(s)	54, 77, 171, 279, 1309, 1611
BsrFI	RCCGGY	2 cut(s)	158, 162
BsrI	ACTGG	1 cut(s)	1749
BssAI	RCCGGY	2 cut(s)	158, 162
BssECI	CCNNGG	5 cut(s)	786, 1044, 1207, 1274, 1388
BssMI	GATC	7 cut(s)	283, 550, 607, 890, 1562, 1714, 1833
BssNI	GRCGYC	2 cut(s)	44, 1540
BssT1I	CCWWGG	2 cut(s)	786, 1388
Bst2UI	CCWGG	5 cut(s)	295, 1209, 1275, 1308, 1347
Bst4CI	ACNGT	4 cut(s)	241, 505, 1470, 1499
Bst6I	CTCTTC	5 cut(s)	247, 419, 618, 930, 1691
BstACI	GRCGYC	2 cut(s)	44, 1540
BstAPI	GCANNNNNTGC	2 cut(s)	476, 1181
BstC8I	GCNNGC	3 cut(s)	33, 1638, 1679
BstENI	CCTNNNNNAGG	2 cut(s)	1272, 1440
BstF5I	GGATG	7 cut(s)	424, 691, 742, 1203, 1284, 1316, 1743
BstH2I	RGCGCY	1 cut(s)	32
BstHHI	GCGC	1 cut(s)	31
BstKTI	GATC	7 cut(s)	286, 553, 610, 893, 1565, 1717, 1836
BstMBI	GATC	7 cut(s)	283, 550, 607, 890, 1562, 1714, 1833
BstMCI	CGRYCG	1 cut(s)	163
BstMWI	GCNNNNNNNGC	9 cut(s)	41, 215, 476, 749, 1038, 1181, 1399, 1513, 1895
BstNI	CCWGG	5 cut(s)	295, 1209, 1275, 1308, 1347
BstSCI	CCNGG	7 cut(s)	293, 732, 1207, 1273, 1306, 1345, 1733
BstSFI	CTRYAG	1 cut(s)	501
BstX2I	RGATCY	3 cut(s)	607, 1714, 1833
BstYI	RGATCY	3 cut(s)	607, 1714, 1833
BstZI	CGGCCG	1 cut(s)	160
Bsu36I	CCTNAGG	1 cut(s)	1437
BsuI	GTATCC	1 cut(s)	1208
BsuRI	GGCC	3 cut(s)	35, 162, 1306
BtsCI	GGATG	7 cut(s)	424, 691, 742, 1203, 1284, 1316, 1743
BtsIMutI	CAGTG	3 cut(s)	237, 927, 1266
Cac8I	GCNNGC	3 cut(s)	33, 1638, 1679
CfoI	GCGC	1 cut(s)	31
Cfr10I	RCCGGY	2 cut(s)	158, 162
Cfr13I	GGNCC	5 cut(s)	1187, 1343, 1445, 1613, 1825
CseI	GACGC	6 cut(s)	33, 117, 215, 830, 1529, 1670
CsiI	ACCWGGT	1 cut(s)	1345
Csp6I	GTAC	2 cut(s)	8, 52
CviAII	CATG	6 cut(s)	248, 268, 409, 967, 1076, 1552
CviQI	GTAC	2 cut(s)	8, 52
DpnI	GATC	7 cut(s)	285, 552, 609, 892, 1564, 1716, 1835
DpnII	GATC	7 cut(s)	283, 550, 607, 890, 1562, 1714, 1833
DrdI	GACNNNNNNGTC	1 cut(s)	127
DseDI	GACNNNNNNGTC	1 cut(s)	127
EaeI	YGGCCR	2 cut(s)	33, 160
EagI	CGGCCG	1 cut(s)	160
Eam1104I	CTCTTC	5 cut(s)	247, 419, 618, 930, 1691
EarI	CTCTTC	5 cut(s)	247, 419, 618, 930, 1691
Ecl136II	GAGCTC	1 cut(s)	940
EclXI	CGGCCG	1 cut(s)	160
Eco130I	CCWWGG	2 cut(s)	786, 1388
Eco24I	GRGCYC	3 cut(s)	360, 734, 942
Eco31I	GGTCTC	6 cut(s)	54, 77, 171, 279, 1309, 1611
Eco47I	GGWCC	5 cut(s)	1187, 1343, 1445, 1613, 1825
Eco52I	CGGCCG	1 cut(s)	160
Eco53kI	GAGCTC	1 cut(s)	940
Eco57I	CTGAAG	2 cut(s)	937, 1139
Eco81I	CCTNAGG	1 cut(s)	1437
Eco88I	CYCGRG	1 cut(s)	1043
EcoICRI	GAGCTC	1 cut(s)	940
EcoNI	CCTNNNNNAGG	2 cut(s)	1272, 1440
EcoO109I	RGGNCCY	1 cut(s)	1825
EcoRII	CCWGG	5 cut(s)	293, 1207, 1273, 1306, 1345
EcoT14I	CCWWGG	2 cut(s)	786, 1388
EcoT38I	GRGCYC	3 cut(s)	360, 734, 942
ErhI	CCWWGG	2 cut(s)	786, 1388
Esp3I	CGTCTC	2 cut(s)	51, 1688
FaeI	CATG	6 cut(s)	251, 271, 412, 970, 1079, 1555
FalI	AAGNNNNNCTT	2 cut(s)	1851, 1883
FaqI	GGGAC	2 cut(s)	161, 1626
FatI	CATG	6 cut(s)	247, 267, 408, 966, 1075, 1551
FauNDI	CATATG	1 cut(s)	1428
FokI	GGATG	7 cut(s)	431, 698, 749, 1190, 1291, 1323, 1750
FriOI	GRGCYC	3 cut(s)	360, 734, 942
FspBI	CTAG	6 cut(s)	702, 744, 1038, 1694, 1854, 1875
GlaI	GCGC	1 cut(s)	30
GsuI	CTGGAG	1 cut(s)	1766
HaeII	RGCGCY	1 cut(s)	32
HaeIII	GGCC	3 cut(s)	35, 162, 1306
HapII	CCGG	6 cut(s)	20, 159, 163, 734, 1712, 1734
HgaI	GACGC	6 cut(s)	33, 117, 215, 830, 1529, 1670
HhaI	GCGC	1 cut(s)	31
Hin1I	GRCGYC	2 cut(s)	44, 1540
Hin1II	CATG	6 cut(s)	251, 271, 412, 970, 1079, 1555
Hin6I	GCGC	1 cut(s)	29
HinP1I	GCGC	1 cut(s)	29
HincII	GTYRAC	3 cut(s)	187, 1473, 1544
HindII	GTYRAC	3 cut(s)	187, 1473, 1544
HindIII	AAGCTT	1 cut(s)	667
HinfI	GANTC	8 cut(s)	16, 455, 464, 758, 1490, 1569, 1781, 1862
HpaII	CCGG	6 cut(s)	20, 159, 163, 734, 1712, 1734
HphI	GGTGA	1 cut(s)	70
Hpy166II	GTNNAC	5 cut(s)	187, 721, 830, 1473, 1544
Hpy188I	TCNGA	7 cut(s)	59, 460, 509, 649, 765, 1095, 1762
Hpy8I	GTNNAC	5 cut(s)	187, 721, 830, 1473, 1544
Hpy99I	CGWCG	5 cut(s)	28, 59, 206, 209, 846
HpyAV	CCTTC	6 cut(s)	332, 811, 859, 1200, 1480, 1877
HpyCH4III	ACNGT	4 cut(s)	241, 505, 1470, 1499
HpyCH4IV	ACGT	4 cut(s)	54, 183, 897, 1546
HpyF10VI	GCNNNNNNNGC	9 cut(s)	41, 215, 476, 749, 1038, 1181, 1399, 1513, 1895
HpySE526I	ACGT	4 cut(s)	54, 183, 897, 1546
Hsp92I	GRCGYC	2 cut(s)	44, 1540
Hsp92II	CATG	6 cut(s)	251, 271, 412, 970, 1079, 1555
HspAI	GCGC	1 cut(s)	29
KpnI	GGTACC	1 cut(s)	11
Kzo9I	GATC	7 cut(s)	283, 550, 607, 890, 1562, 1714, 1833
LguI	GCTCTTC	2 cut(s)	618, 930
LmnI	GCTCC	3 cut(s)	363, 868, 1243
LweI	GCATC	4 cut(s)	280, 730, 1611, 1728
MabI	ACCWGGT	1 cut(s)	1345
MaeI	CTAG	6 cut(s)	702, 744, 1038, 1694, 1854, 1875
MaeII	ACGT	4 cut(s)	54, 183, 897, 1546
MaeIII	GTNAC	3 cut(s)	925, 1547, 1877
MalI	GATC	7 cut(s)	285, 552, 609, 892, 1564, 1716, 1835
MboI	GATC	7 cut(s)	283, 550, 607, 890, 1562, 1714, 1833
MfeI	CAATTG	3 cut(s)	471, 518, 1903
MflI	RGATCY	3 cut(s)	607, 1714, 1833
MhlI	GDGCHC	4 cut(s)	360, 734, 811, 942
MlyI	GAGTC	5 cut(s)	10, 464, 1499, 1578, 1790
MmeI	TCCRAC	5 cut(s)	37, 432, 487, 1576, 1758
MroXI	GAANNNNTTC	2 cut(s)	627, 1818
MseI	TTAA	2 cut(s)	878, 1701
MspA1I	CMGCKG	2 cut(s)	1147, 1199
MspI	CCGG	6 cut(s)	20, 159, 163, 734, 1712, 1734
MspR9I	CCNGG	7 cut(s)	295, 734, 1209, 1275, 1308, 1347, 1735
MunI	CAATTG	3 cut(s)	471, 518, 1903
MvaI	CCWGG	5 cut(s)	295, 1209, 1275, 1308, 1347
MwoI	GCNNNNNNNGC	9 cut(s)	41, 215, 476, 749, 1038, 1181, 1399, 1513, 1895
NciI	CCSGG	2 cut(s)	734, 1735
NdeI	CATATG	1 cut(s)	1428
NdeII	GATC	7 cut(s)	283, 550, 607, 890, 1562, 1714, 1833
NlaIII	CATG	6 cut(s)	251, 271, 412, 970, 1079, 1555
NlaIV	GGNNCC	6 cut(s)	9, 359, 609, 784, 1239, 1614
NmuCI	GTSAC	2 cut(s)	925, 1547
PciSI	GCTCTTC	2 cut(s)	618, 930
PdmI	GAANNNNTTC	2 cut(s)	627, 1818
PfeI	GAWTC	3 cut(s)	464, 758, 1862
PleI	GAGTC	5 cut(s)	10, 463, 1498, 1577, 1789
PpsI	GAGTC	5 cut(s)	10, 463, 1498, 1577, 1789
PpuMI	RGGWCCY	1 cut(s)	1825
PsiI	TTATAA	1 cut(s)	665
Psp124BI	GAGCTC	1 cut(s)	942
Psp5II	RGGWCCY	1 cut(s)	1825
Psp6I	CCWGG	5 cut(s)	293, 1207, 1273, 1306, 1345
PspGI	CCWGG	5 cut(s)	293, 1207, 1273, 1306, 1345
PspN4I	GGNNCC	6 cut(s)	9, 359, 609, 784, 1239, 1614
PspPI	GGNCC	5 cut(s)	1187, 1343, 1445, 1613, 1825
PspPPI	RGGWCCY	1 cut(s)	1825
PsuI	RGATCY	3 cut(s)	607, 1714, 1833
PvuII	CAGCTG	2 cut(s)	1147, 1199
RsaI	GTAC	2 cut(s)	9, 53
RsaNI	GTAC	2 cut(s)	8, 52
SacI	GAGCTC	1 cut(s)	942
SapI	GCTCTTC	2 cut(s)	618, 930
SaqAI	TTAA	2 cut(s)	878, 1701
Sau3AI	GATC	7 cut(s)	283, 550, 607, 890, 1562, 1714, 1833
Sau96I	GGNCC	5 cut(s)	1187, 1343, 1445, 1613, 1825
SchI	GAGTC	5 cut(s)	10, 464, 1499, 1578, 1790
ScrFI	CCNGG	7 cut(s)	295, 734, 1209, 1275, 1308, 1347, 1735
SduI	GDGCHC	4 cut(s)	360, 734, 811, 942
SexAI	ACCWGGT	1 cut(s)	1345
SfaNI	GCATC	4 cut(s)	280, 730, 1611, 1728
SfcI	CTRYAG	1 cut(s)	501
SinI	GGWCC	5 cut(s)	1187, 1343, 1445, 1613, 1825
SmlI	CTYRAG	2 cut(s)	331, 1829
SmoI	CTYRAG	2 cut(s)	331, 1829
SpeI	ACTAGT	1 cut(s)	1693
SsiI	CCGC	2 cut(s)	11, 1358
SspMI	CTAG	6 cut(s)	702, 744, 1038, 1694, 1854, 1875
SstI	GAGCTC	1 cut(s)	942
StyD4I	CCNGG	7 cut(s)	293, 732, 1207, 1273, 1306, 1345, 1733
StyI	CCWWGG	2 cut(s)	786, 1388
TaaI	ACNGT	4 cut(s)	241, 505, 1470, 1499
TaiI	ACGT	4 cut(s)	57, 186, 900, 1549
TaqI	TCGA	4 cut(s)	214, 553, 1270, 1484
TaqII	GACCGA	1 cut(s)	101
TfiI	GAWTC	3 cut(s)	464, 758, 1862
Tru1I	TTAA	2 cut(s)	878, 1701
Tru9I	TTAA	2 cut(s)	878, 1701
TscAI	CASTG	3 cut(s)	244, 934, 1266
TseFI	GTSAC	2 cut(s)	925, 1547
Tsp45I	GTSAC	2 cut(s)	925, 1547
TspDTI	ATGAA	6 cut(s)	702, 948, 1064, 1079, 1568, 1859
TspGWI	ACGGA	2 cut(s)	121, 877
TspRI	CASTG	3 cut(s)	244, 934, 1266
VpaK11BI	GGWCC	5 cut(s)	1187, 1343, 1445, 1613, 1825
XagI	CCTNNNNNAGG	2 cut(s)	1272, 1440
XapI	RAATTY	5 cut(s)	377, 601, 696, 834, 881
XbaI	TCTAGA	1 cut(s)	701
XmnI	GAANNNNTTC	2 cut(s)	627, 1818
XspI	CTAG	6 cut(s)	702, 744, 1038, 1694, 1854, 1875

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.