Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0004476

Physical Location & Seq

Genomic Coordinates Reverse (-)

6917587 .. 6921241

Gene Structure 3655 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1097400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1287 bp

ATGGCAGGGGCAGTCTCGGCGCTGTTCCTCCTAGACATCAAAGGCCGCGTTCTCATCTGGCGCGACTACCGCGGCGACGTCTCCGCCGCTCAAGCCGAGCGCTTCTTCACTAAGCTCATCGAGAAAGAGGTTGATCCGGAATCTCATGATCCAGTTGTTCACGATAATGGCGTGAGCTACTTGTTTATACAGCATAACAATGTTTACTTGATGACTGCGTCCAGGCAGAACTGCAATGCGGCTAGTCTTCTCTTCTTTCTACACCGAATAGTCGATGTGTTCAAGCATTACTTTGAAGAGTTAGAAGAAGAATCGCTTAGGGATAACTTTGTGGTTGTGTATGAGTTGCTCGATGAAATGATGGACTTTGGTTACCCTCAGTATACTGAAGCCAAGATTCTCAGCGAATTTATCAAGACTGATGCTTACAGGATGGAAGTTACACAGAGACCTCCCATGGCCGTAACAAATGCGGTGTCTTGGCGAAGTGAAGGGATACGTTACAAGAAGAATGAGGTTTTCCTGGATGTGGTGGAGAGTGTTAATATACTAGTCAACAGCAATGGACAAATCATTAGGTCTGATGTTGTTGGTGCATTGAAGATGAGAACTTATTTGAGTGGTATGCCTGAATGTAAGCTGGGCTTAAATGATAGAGTGTTATTGGAGGCACAAGGGCGAGCAACAAAGGGAAAGGCCATTGATTTGGAAGACATCAAATTTCATCAGTGTGTTCGTTTGGCTCGGTTTGAAAATGACCGGACAATATCTTTTGTACCACCTGATGGAGCTTTTGATCTCATGACATATAGGCTGAGTACACAGGTTAAGCCTCTAATTTGGGTTGAATGTCAAATTGAAAGGCATTCAAAAAGTCGCATTGAGATTCTGGTAAAAGCTAGAAGCCAGTTCAAGGAGCGTAGTACTGCAACAAACGTTGAGATTGAGGTTCCTGTGGTATCTGATGCCACTAACCCTGATGTTCGGACATCATTAGGATCTGCCGCATATGCACCTGAAAGTGATGCGCTTATCTGGAAAATAAGATCTTTTCCCGGAGGCAAGGAATACATGTTGAGAGCAGAGTTTCGTCTGCCAAGTGTAACAGCTGAAGAATCAACTCCTGAGAGAAAAGCTCCTGTACGTGTGAAGTTCGAGATACCATATTTCACTGTTTCTGGAATACAGGTTCGTTACCTCAAGATTATTGAAAAAAGCGGATACCAAGCTCTTCCATGGGTGAGATACATAACCATGGCTGGCGAGTATGAATTAAGACTGGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002119 GO:0002164 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005798 GO:0006810 GO:0006886 GO:0006996 GO:0007275 GO:0008104 GO:0008150 GO:0009790 GO:0009791 GO:0009792 GO:0009987 GO:0012505 GO:0012506 GO:0012510 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0022607 GO:0030030 GO:0030031 GO:0030117 GO:0030118 GO:0030119 GO:0030120 GO:0030121 GO:0030125 GO:0030130 GO:0030131 GO:0030133 GO:0030135 GO:0030136 GO:0030140 GO:0030658 GO:0030659 GO:0030660 GO:0030662 GO:0030665 GO:0031090 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0040025 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0044782 GO:0045176 GO:0045184 GO:0046907 GO:0048475 GO:0048513 GO:0048569 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0060271 GO:0061512 GO:0070727 GO:0070925 GO:0071702 GO:0071705 GO:0071840 GO:0072657 GO:0097499 GO:0097500 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0120031 GO:0120036 GO:1903441 GO:1990778

KEGG Pathways

Metabolic & Signaling

ko04142 map04142

Pfam Domains

Protein Families

Adap_comp_sub Clat_adaptor_s

Protein Analysis

429

Amino Acids

49.1

Weight (kDa)

6.09

Isoelectric Point (pI)

36.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Clat_adaptor_s	PF01217	5 - 131	2.2e-07	Clathrin adaptor complex small chain
Adap_comp_sub	PF00928	159 - 426	1.5e-95	Adaptor complexes medium subunit family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004476)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10730 AT1G60780
fragaria_vesca	FvH4_4g25870 FvH4_4g25870 FvH4_5g05940 FvH4_5g05940
malus_domestica	MD06G1169300.v1.1 MD13G1097400.v1.1 MD14G1174600.v1.1 MD16G1098500.v1.1
prunus_persica	Prupe.1G248000_v2.0.a1 Prupe.1G248000_v2.0.a1 Prupe.5G168100_v2.0.a1
pyrus_communis	pycom06g15080 pycom14g14570 pycom16g08380
rosa_chinensis	RchiOBHm_Chr4g0433301 RchiOBHm_Chr7g0192901
rosa_laevigata	RLG00000004314 RLG00000006765
rosa_multiflora	Rmu_sc0000354.1_g000005 Rmu_sc0002040.1_g000054
rosa_roxburghii	Rroxscaffold_3G00262560 Rroxscaffold_5G00374860
rosa_rugosa	Rorug04G0267900 Rorug07G0005500
rosa_samantha	Rh4BG329900 Rh4CG345300 Rh4DG326600 Rh7AG131200
rosa_wichuraiana	Rw4G027900 Rw7G011190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	81
AccB7I	CCANNNNNTGG	1 cut(s)	785
AccBSI	CCGCTC	1 cut(s)	89
AccI	GTMKAC	1 cut(s)	383
AccII	CGCG	3 cut(s)	48, 63, 72
AccIII	TCCGGA	1 cut(s)	136
AciI	CCGC	9 cut(s)	46, 70, 72, 84, 87, 239, 473, 1005, 1218
AclI	AACGTT	1 cut(s)	936
AclWI	GGATC	3 cut(s)	128, 143, 1006
AcoI	YGGCCR	1 cut(s)	459
AcsI	RAATTY	2 cut(s)	407, 719
AcuI	CTGAAG	2 cut(s)	408, 1131
AcyI	GRCGYC	1 cut(s)	78
AfaI	GTAC	4 cut(s)	777, 820, 925, 1143
AfeI	AGCGCT	1 cut(s)	101
AfiI	CCNNNNNNNGG	3 cut(s)	529, 785, 913
AflIII	ACRYGT	2 cut(s)	1071, 1144
AgsI	TTSAA	9 cut(s)	283, 296, 601, 752, 848, 860, 870, 913, 1211
AhlI	ACTAGT	1 cut(s)	550
AjnI	CCWGG	2 cut(s)	221, 522
AloI	GAACNNNNNNTCC	2 cut(s)	1173, 1205
AluBI	AGCT	8 cut(s)	115, 177, 640, 791, 899, 1109, 1136, 1229
AluI	AGCT	8 cut(s)	115, 177, 640, 791, 899, 1109, 1136, 1229
Alw26I	GTCTC	3 cut(s)	19, 85, 442
AlwI	GGATC	3 cut(s)	128, 143, 1006
Aor13HI	TCCGGA	1 cut(s)	136
Aor51HI	AGCGCT	1 cut(s)	101
AoxI	GGCC	3 cut(s)	43, 459, 696
ApoI	RAATTY	2 cut(s)	407, 719
ArsI	GACNNNNNNTTYG	2 cut(s)	461, 493
AspLEI	GCGC	4 cut(s)	22, 63, 102, 1030
AsuC2I	CCSGG	1 cut(s)	1056
AsuHPI	GGTGA	1 cut(s)	1252
BbsI	GAAGAC	2 cut(s)	239, 717
BccI	CCATC	3 cut(s)	355, 427, 779
BceAI	ACGGC	1 cut(s)	446
BciT130I	CCWGG	2 cut(s)	223, 524
BciVI	GTATCC	2 cut(s)	489, 1214
BcnI	CCSGG	1 cut(s)	1056
BcoDI	GTCTC	3 cut(s)	19, 85, 442
BcuI	ACTAGT	1 cut(s)	550
BfaI	CTAG	4 cut(s)	32, 243, 551, 900
BfoI	RGCGCY	2 cut(s)	23, 103
BfuI	GTATCC	2 cut(s)	489, 1214
BglII	AGATCT	1 cut(s)	1046
BisI	GCNGC	5 cut(s)	46, 73, 87, 240, 1005
BlsI	GCNGC	5 cut(s)	47, 74, 88, 241, 1006
BmcAI	AGTACT	1 cut(s)	925
Bme1390I	CCNGG	3 cut(s)	223, 524, 1056
BmiI	GGNNCC	1 cut(s)	951
BmrFI	CCNGG	3 cut(s)	223, 524, 1056
BmsI	GCATC	3 cut(s)	412, 955, 1015
BpiI	GAAGAC	2 cut(s)	239, 717
BplI	GAGNNNNNCTC	2 cut(s)	1120, 1152
Bpu10I	CCTNAGC	1 cut(s)	317
BpuEI	CTTGAG	2 cut(s)	75, 1184
BpuMI	CCSGG	1 cut(s)	1056
BsaAI	YACGTR	1 cut(s)	1145
BsaHI	GRCGYC	1 cut(s)	78
BsaI	GGTCTC	1 cut(s)	442
BsaJI	CCNNGG	4 cut(s)	70, 456, 1235, 1254
BsaWI	WCCGGW	2 cut(s)	136, 759
Bsc4I	CCNNNNNNNGG	3 cut(s)	529, 785, 913
Bse1I	ACTGG	3 cut(s)	152, 907, 1284
Bse3DI	GCAATG	2 cut(s)	241, 568
BseAI	TCCGGA	1 cut(s)	136
BseBI	CCWGG	2 cut(s)	223, 524
BseDI	CCNNGG	4 cut(s)	70, 456, 1235, 1254
BseGI	GGATG	2 cut(s)	438, 532
BseLI	CCNNNNNNNGG	3 cut(s)	529, 785, 913
BseMI	GCAATG	2 cut(s)	241, 568
BseMII	CTCAG	4 cut(s)	392, 415, 806, 1116
BseNI	ACTGG	3 cut(s)	152, 907, 1284
BseYI	CCCAGC	1 cut(s)	640
Bsh1236I	CGCG	3 cut(s)	48, 63, 72
BshFI	GGCC	3 cut(s)	45, 461, 698
BsiSI	CCGG	3 cut(s)	137, 760, 1056
BslI	CCNNNNNNNGG	3 cut(s)	529, 785, 913
BsmAI	GTCTC	3 cut(s)	19, 85, 442
BsmBI	CGTCTC	1 cut(s)	85
BsmI	GAATGC	1 cut(s)	865
BsnI	GGCC	3 cut(s)	45, 461, 698
Bso31I	GGTCTC	1 cut(s)	442
Bsp13I	TCCGGA	1 cut(s)	136
Bsp143I	GATC	5 cut(s)	133, 148, 796, 998, 1046
Bsp19I	CCATGG	3 cut(s)	456, 1235, 1254
BspACI	CCGC	9 cut(s)	46, 70, 72, 84, 87, 239, 473, 1005, 1218
BspANI	GGCC	3 cut(s)	45, 461, 698
BspCNI	CTCAG	4 cut(s)	391, 414, 807, 1117
BspEI	TCCGGA	1 cut(s)	136
BspFNI	CGCG	3 cut(s)	48, 63, 72
BspHI	TCATGA	2 cut(s)	145, 801
BspLI	GGNNCC	1 cut(s)	951
BspPI	GGATC	3 cut(s)	128, 143, 1006
BspQI	GCTCTTC	1 cut(s)	1236
BspTNI	GGTCTC	1 cut(s)	442
BsrBI	CCGCTC	1 cut(s)	89
BsrDI	GCAATG	2 cut(s)	241, 568
BsrI	ACTGG	3 cut(s)	152, 907, 1284
BssECI	CCNNGG	4 cut(s)	70, 456, 1235, 1254
BssMI	GATC	5 cut(s)	133, 148, 796, 998, 1046
BssNAI	GTATAC	1 cut(s)	384
BssNI	GRCGYC	1 cut(s)	78
BssT1I	CCWWGG	3 cut(s)	456, 1235, 1254
Bst1107I	GTATAC	1 cut(s)	384
Bst2UI	CCWGG	2 cut(s)	223, 524
Bst4CI	ACNGT	1 cut(s)	1174
Bst6I	CTCTTC	3 cut(s)	257, 291, 1236
BstACI	GRCGYC	1 cut(s)	78
BstBAI	YACGTR	1 cut(s)	1145
BstC8I	GCNNGC	2 cut(s)	681, 1261
BstDEI	CTNAG	6 cut(s)	111, 317, 378, 401, 815, 1125
BstDSI	CCRYGG	4 cut(s)	70, 456, 1235, 1254
BstEII	GGTNACC	1 cut(s)	371
BstF5I	GGATG	2 cut(s)	438, 532
BstFNI	CGCG	3 cut(s)	48, 63, 72
BstH2I	RGCGCY	2 cut(s)	23, 103
BstHHI	GCGC	4 cut(s)	22, 63, 102, 1030
BstKTI	GATC	5 cut(s)	136, 151, 799, 1001, 1049
BstMAI	GTCTC	3 cut(s)	19, 85, 442
BstMBI	GATC	5 cut(s)	133, 148, 796, 998, 1046
BstMWI	GCNNNNNNNGC	4 cut(s)	17, 69, 92, 1010
BstNI	CCWGG	2 cut(s)	223, 524
BstNSI	RCATGY	1 cut(s)	1075
BstPI	GGTNACC	1 cut(s)	371
BstSCI	CCNGG	3 cut(s)	221, 522, 1054
BstUI	CGCG	3 cut(s)	48, 63, 72
BstV2I	GAAGAC	2 cut(s)	239, 717
BstX2I	RGATCY	2 cut(s)	998, 1046
BstXI	CCANNNNNNTGG	1 cut(s)	706
BstYI	RGATCY	2 cut(s)	998, 1046
BstZ17I	GTATAC	1 cut(s)	384
BsuI	GTATCC	2 cut(s)	489, 1214
BsuRI	GGCC	3 cut(s)	45, 461, 698
BtgI	CCRYGG	4 cut(s)	70, 456, 1235, 1254
BtsCI	GGATG	2 cut(s)	438, 532
BtsIMutI	CAGTG	2 cut(s)	734, 1170
Cac8I	GCNNGC	2 cut(s)	681, 1261
CciI	TCATGA	2 cut(s)	145, 801
CfoI	GCGC	4 cut(s)	22, 63, 102, 1030
Cfr42I	CCGCGG	1 cut(s)	73
CseI	GACGC	1 cut(s)	207
Csp6I	GTAC	4 cut(s)	776, 819, 924, 1142
CviAII	CATG	6 cut(s)	146, 457, 802, 1072, 1236, 1255
CviQI	GTAC	4 cut(s)	776, 819, 924, 1142
DdeI	CTNAG	6 cut(s)	111, 317, 378, 401, 815, 1125
DpnI	GATC	5 cut(s)	135, 150, 798, 1000, 1048
DpnII	GATC	5 cut(s)	133, 148, 796, 998, 1046
EaeI	YGGCCR	1 cut(s)	459
Eam1104I	CTCTTC	3 cut(s)	257, 291, 1236
EarI	CTCTTC	3 cut(s)	257, 291, 1236
EciI	GGCGGA	1 cut(s)	73
Eco130I	CCWWGG	3 cut(s)	456, 1235, 1254
Eco31I	GGTCTC	1 cut(s)	442
Eco47III	AGCGCT	1 cut(s)	101
Eco57I	CTGAAG	2 cut(s)	408, 1131
Eco91I	GGTNACC	1 cut(s)	371
EcoO65I	GGTNACC	1 cut(s)	371
EcoRII	CCWGG	2 cut(s)	221, 522
EcoT14I	CCWWGG	3 cut(s)	456, 1235, 1254
ErhI	CCWWGG	3 cut(s)	456, 1235, 1254
Esp3I	CGTCTC	1 cut(s)	85
FaeI	CATG	6 cut(s)	149, 460, 805, 1075, 1239, 1258
FalI	AAGNNNNNCTT	6 cut(s)	275, 307, 300, 332, 629, 661
FatI	CATG	6 cut(s)	145, 456, 801, 1071, 1235, 1254
FauNDI	CATATG	1 cut(s)	1009
FblI	GTMKAC	1 cut(s)	383
Fnu4HI	GCNGC	5 cut(s)	46, 73, 87, 240, 1005
FokI	GGATG	2 cut(s)	445, 539
Fsp4HI	GCNGC	5 cut(s)	46, 73, 87, 240, 1005
FspBI	CTAG	4 cut(s)	32, 243, 551, 900
GlaI	GCGC	4 cut(s)	21, 62, 101, 1029
GluI	GCNGC	5 cut(s)	46, 73, 87, 240, 1005
GsaI	CCCAGC	1 cut(s)	644
HaeII	RGCGCY	2 cut(s)	23, 103
HaeIII	GGCC	3 cut(s)	45, 461, 698
HapII	CCGG	3 cut(s)	137, 760, 1056
HgaI	GACGC	1 cut(s)	207
HhaI	GCGC	4 cut(s)	22, 63, 102, 1030
Hin1I	GRCGYC	1 cut(s)	78
Hin1II	CATG	6 cut(s)	149, 460, 805, 1075, 1239, 1258
Hin6I	GCGC	4 cut(s)	20, 61, 100, 1028
HinP1I	GCGC	4 cut(s)	20, 61, 100, 1028
HincII	GTYRAC	1 cut(s)	556
HindII	GTYRAC	1 cut(s)	556
HinfI	GANTC	5 cut(s)	140, 311, 397, 886, 1115
HpaII	CCGG	3 cut(s)	137, 760, 1056
HphI	GGTGA	1 cut(s)	1252
Hpy166II	GTNNAC	5 cut(s)	160, 205, 384, 556, 821
Hpy188I	TCNGA	3 cut(s)	583, 964, 987
Hpy8I	GTNNAC	5 cut(s)	160, 205, 384, 556, 821
Hpy99I	CGWCG	1 cut(s)	80
HpyAV	CCTTC	1 cut(s)	485
HpyCH4III	ACNGT	1 cut(s)	1174
HpyCH4IV	ACGT	4 cut(s)	78, 499, 936, 1144
HpyCH4V	TGCA	4 cut(s)	234, 596, 929, 1013
HpyF10VI	GCNNNNNNNGC	4 cut(s)	17, 69, 92, 1010
HpyF3I	CTNAG	6 cut(s)	111, 317, 378, 401, 815, 1125
HpySE526I	ACGT	4 cut(s)	78, 499, 936, 1144
Hsp92I	GRCGYC	1 cut(s)	78
Hsp92II	CATG	6 cut(s)	149, 460, 805, 1075, 1239, 1258
HspAI	GCGC	4 cut(s)	20, 61, 100, 1028
Kpn2I	TCCGGA	1 cut(s)	136
KspI	CCGCGG	1 cut(s)	73
Kzo9I	GATC	5 cut(s)	133, 148, 796, 998, 1046
LguI	GCTCTTC	1 cut(s)	1236
LmnI	GCTCC	3 cut(s)	788, 916, 1141
LweI	GCATC	3 cut(s)	412, 955, 1015
MaeI	CTAG	4 cut(s)	32, 243, 551, 900
MaeII	ACGT	4 cut(s)	78, 499, 936, 1144
MaeIII	GTNAC	6 cut(s)	371, 439, 463, 500, 1102, 1193
MalI	GATC	5 cut(s)	135, 150, 798, 1000, 1048
MbiI	CCGCTC	1 cut(s)	89
MboI	GATC	5 cut(s)	133, 148, 796, 998, 1046
MflI	RGATCY	2 cut(s)	998, 1046
MluCI	AATT	5 cut(s)	407, 719, 837, 855, 1271
MroI	TCCGGA	1 cut(s)	136
MseI	TTAA	4 cut(s)	543, 647, 828, 1274
MslI	CAYNNNNRTG	4 cut(s)	165, 198, 729, 1253
MspA1I	CMGCKG	2 cut(s)	72, 1109
MspI	CCGG	3 cut(s)	137, 760, 1056
MspR9I	CCNGG	3 cut(s)	223, 524, 1056
Mva1269I	GAATGC	1 cut(s)	865
MvaI	CCWGG	2 cut(s)	223, 524
MvnI	CGCG	3 cut(s)	48, 63, 72
MwoI	GCNNNNNNNGC	4 cut(s)	17, 69, 92, 1010
NciI	CCSGG	1 cut(s)	1056
NcoI	CCATGG	3 cut(s)	456, 1235, 1254
NdeI	CATATG	1 cut(s)	1009
NdeII	GATC	5 cut(s)	133, 148, 796, 998, 1046
NlaIII	CATG	6 cut(s)	149, 460, 805, 1075, 1239, 1258
NlaIV	GGNNCC	1 cut(s)	951
NmeAIII	GCCGAG	1 cut(s)	121
NspI	RCATGY	1 cut(s)	1075
PagI	TCATGA	2 cut(s)	145, 801
PciI	ACATGT	1 cut(s)	1071
PciSI	GCTCTTC	1 cut(s)	1236
PcsI	WCGNNNNNNNCGW	1 cut(s)	168
PctI	GAATGC	1 cut(s)	865
PfeI	GAWTC	5 cut(s)	140, 311, 397, 886, 1115
PflFI	GACNNNGTC	1 cut(s)	217
PflMI	CCANNNNNTGG	1 cut(s)	785
PfoI	TCCNGGA	2 cut(s)	522, 1054
PkrI	GCNGC	5 cut(s)	47, 74, 88, 241, 1006
Ppu21I	YACGTR	1 cut(s)	1145
PscI	ACATGT	1 cut(s)	1071
Psp1406I	AACGTT	1 cut(s)	936
Psp6I	CCWGG	2 cut(s)	221, 522
PspEI	GGTNACC	1 cut(s)	371
PspFI	CCCAGC	1 cut(s)	640
PspGI	CCWGG	2 cut(s)	221, 522
PspN4I	GGNNCC	1 cut(s)	951
PsuI	RGATCY	2 cut(s)	998, 1046
PsyI	GACNNNGTC	1 cut(s)	217
PvuII	CAGCTG	1 cut(s)	1109
RsaI	GTAC	4 cut(s)	777, 820, 925, 1143
RsaNI	GTAC	4 cut(s)	776, 819, 924, 1142
RseI	CAYNNNNRTG	4 cut(s)	165, 198, 729, 1253
SacII	CCGCGG	1 cut(s)	73
SapI	GCTCTTC	1 cut(s)	1236
SaqAI	TTAA	4 cut(s)	543, 647, 828, 1274
SatI	GCNGC	5 cut(s)	46, 73, 87, 240, 1005
Sau3AI	GATC	5 cut(s)	133, 148, 796, 998, 1046
ScaI	AGTACT	1 cut(s)	925
ScrFI	CCNGG	3 cut(s)	223, 524, 1056
SfaNI	GCATC	3 cut(s)	412, 955, 1015
Sfr303I	CCGCGG	1 cut(s)	73
SgrBI	CCGCGG	1 cut(s)	73
SmiMI	CAYNNNNRTG	4 cut(s)	165, 198, 729, 1253
SmlI	CTYRAG	2 cut(s)	90, 1199
SmoI	CTYRAG	2 cut(s)	90, 1199
SpeI	ACTAGT	1 cut(s)	550
Sse9I	AATT	5 cut(s)	407, 719, 837, 855, 1271
SsiI	CCGC	9 cut(s)	46, 70, 72, 84, 87, 239, 473, 1005, 1218
SspMI	CTAG	4 cut(s)	32, 243, 551, 900
StyD4I	CCNGG	3 cut(s)	221, 522, 1054
StyI	CCWWGG	3 cut(s)	456, 1235, 1254
TaaI	ACNGT	1 cut(s)	1174
TaiI	ACGT	4 cut(s)	81, 502, 939, 1147
TaqI	TCGA	4 cut(s)	120, 273, 351, 1155
TasI	AATT	5 cut(s)	407, 719, 837, 855, 1271
TatI	WGTACW	2 cut(s)	818, 923
TauI	GCSGC	5 cut(s)	48, 75, 89, 242, 1007
TfiI	GAWTC	5 cut(s)	140, 311, 397, 886, 1115
Tru1I	TTAA	4 cut(s)	543, 647, 828, 1274
Tru9I	TTAA	4 cut(s)	543, 647, 828, 1274
TscAI	CASTG	2 cut(s)	734, 1177
TspDTI	ATGAA	3 cut(s)	369, 713, 1284
TspRI	CASTG	2 cut(s)	734, 1177
Tth111I	GACNNNGTC	1 cut(s)	217
Van91I	CCANNNNNTGG	1 cut(s)	785
XapI	RAATTY	2 cut(s)	407, 719
XceI	RCATGY	1 cut(s)	1075
XmiI	GTMKAC	1 cut(s)	383
XspI	CTAG	4 cut(s)	32, 243, 551, 900
ZraI	GACGTC	1 cut(s)	79
ZrmI	AGTACT	1 cut(s)	925

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.