Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0006481

Physical Location & Seq

Genomic Coordinates Reverse (-)

13776356 .. 13781785

Gene Structure 5430 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1170000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2568 bp

ATGGAGATGGATTCAGTTGAAGGAGATAGCCATGGGGATATCAATGACGATGAATCAGCGGAGCATTCATTTCCTCCAGAAGCTTCTGATCCATGTGGTGTCTCTGGTGACCCTGAGCTAGGTCCTAGAGTTGGAGATGACTACCAGGCTGAAATTCCCTGTCTAATAGCTGTTTCTGACTATGTACGACTTTTAAAGAACCCAATTGATGCAGAAATTGCTGGCGGTAGTCCCCATGGTTTAGGAATGGGGTTACCCATACCAGTAATGTGGATCAATGAGGAATTTGAGAGCAACAAATATGAACATGTCAAAGAGACCCTGATTGTTTCAGAAAGTGACAACATAAAATGCAAAGCTCAGCCAATGGATGTTAAATTCAAGAATGGGACAACATCAGGTGAGTCAGAAAAGTTAGTATTGAAACAAGAACTGATGGCTCAAATGTATAAAAAGCCTGGAGGTGTGTATTGTCCGGTTCCTGGTTCTGGAGGTGACAGCTGGAGTGGCATAGAAGAAGCCAGTTTTCTTCTTGGTTTATATATCTTTGGAAAGAAACTGGTTCTGGTGAAGAAGTTTGTCGGGAGTAAACAGATGGGCGATGTATTGTCATTCTACCATGGGAAGTTTTACAAGTCTGACAGATACAAAAGATGGAAAGAATGCAAAAAAATGAGAAGCAGAAAATGTATATTTGGGCAAAGAATTTTTATGGGGCCAAGGCAACATGAGTTGTTTTCTCGTTTGTTTTCTCACGTGTCAGAGGAGTGTCAAAATTCTTTGCTCGAGGTCTCGAAGACATTTGGGGAAGGAAAAATTTTACTAGAAGAATATGTATTCATTTTAAAGGCTAGAGTTGGATTGAATGCACTTGTAGAGGCAGTGGGAATTGGTACGGGAAAGAAAGATCTCACAGGCATTGCGACAGAGACTTTAAAGTCCAATCATGTTGCTCCCGTTCGCCCAGAAATACCAACTGGCAAAGCATGCTCCTCCCTTACACCACTAGAAATAGTCAACTTTCTAACTGGGGGCTTCCGGCTAAGCAAAGCCCGCTCAAGCGATCTCTTTTGGGAAGCTGTTTGGCCTCGTTTGCTTGCAAGAGGGTGGCATTCTGAGCAGCCTTATCCGGGTTTCTCCACTGGTTCCAAGAATTCATTGGTCTTTCTTATCCCTGGTATTAAGAAGTTTTCAAAAAGGAAACTGGTGAAGGGAAGCCACTACTTTGATTCTGTAAGTGATGTCCTGAATAAAGTTGCTTCAGACCCCAAGCTTCTTGAGCTTGAAACAGGAGCAAATAAAGAAAATGGGTGGACAGATGAAACAAAGCTGGACGAACATGACTTCCCAAATCAGCAACGCCACTGTTATCTGCAGCCTCGTACTCCAAATCGTAGTAGTGCAGATGTCGTGAAGTTTACAGTTGTGGATACAAGTCTGTCTAATCGGAAAACATCCAAGGTGAGGGAACTGAGAAGCTTACCATTTGAATTGGATGCCTCCACCTCCAGAAGTGATTCTGATGATGACGATGAGGATGCTTCTGAAGATTCAACAGATAAATCTAATTCTGCTGATTCCTTGTGTTCACAGAGGATCCATGTTTCGAAGTCCATCTGTTTGGGTAGAAGCGAATTCAAAATAAGCGATGACAAATATTTTGAATATGATACTTCAGAGTGGGAGCATCAAGCTTCTGGTCAAGGTTTGACCACTGTGACTGCAGATCTCTCTAAGAATGAGAACATTGGTATATGCAATGACATGCGGCACAGGAAAGCTACGAAGTGCCAAAAGATCCAGAAAATGGTTTCTGAAAAGGAAAATCATGTGGCCCCTGTTTTAAAAAGACGTCAACAGTTAGTTGCTTGTAATCTCACATATACCATCCCCAGCAGGAACCACTTCTTGCAAGGTCCCTTGTTACAGCAAGATGCATGCAGCTCTGAAGACCACCCTGAACTTAGTGAGAAAACTCCCTCTCAAGTGGATCTATCCGAAGAGAAGTTATCATCCACCAGTACTTTGTCTAGAGGAGCCAGTCCAGTTAATAATGGTGAAGGCAAACGTGGCGATAGTTTGCGCGTGGAAACATTTCATGAGAATCCTCAGTGCCGTACATTTTTTGACTTGAACATGCCCCCCTCTCTAGATGCTGAAACTGATGAACCTTTCACAATGACAGAAAGACAAGATGATCAAACAAAACAGGAACCGGATACCGCTTCCCATTCAACTCAGCCCTCTGAATGTGGGGATATTTCTGAATTGCAGTCTGCAATGAACTCTCGGAGACAGAGCACAAGAAACCGACCACTGACCACTAAGGTACTGGAATCTTTTGCTTATGGATTTTTCGACACCAAGCAGAAGCGGAAGAGTAGGGATGAATTTCCCCAAGACAACTCCATATTAAGGCCATCCAAGCGTGCTCGCACGAAGGTGAGAGCTCCGGACAGTTTTGATACTAGTCTCCCGGATTTCAGCATGCAGGAAACCGGGAGTGCTACCCCCAATAACAACGCTGACGGGTACAGCGAGCTTGACATGGTCTCCCAAGTCAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

856

Amino Acids

95.49

Weight (kDa)

5.75

Isoelectric Point (pI)

48.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7952	PF25826	168 - 298	2.3e-61	Domain of unknown function (DUF7952)
DUF7650	PF24662	337 - 423	1.1e-43	Domain of unknown function (DUF7650)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47820 AT2G47820
fragaria_vesca	FvH4_4g17850 FvH4_4g17850 FvH4_4g17850
malus_domestica	MD03G1283800.v1.1 MD13G1170000.v1.1 MD16G1171500.v1.1
prunus_persica	Prupe.1G138300_v2.0.a1 Prupe.1G138300_v2.0.a1 Prupe.1G138300_v2.0.a1 Prupe.8G255900_v2.0.a1
pyrus_communis	pycom13g14550 pycom16g14380
rosa_chinensis	RchiOBHm_Chr4g0421961
rosa_laevigata	RLG00000007650
rosa_multiflora	Rmu_co7962282.1_g000001 Rmu_sc0020808.1_g000003 Rmu_sc0021995.1_g000001
rosa_roxburghii	Rroxscaffold_5G00364050
rosa_rugosa	Rorug04G0176500
rosa_samantha	Rh4AG235500 Rh4BG238800 Rh4CG250200 Rh4DG234300
rosa_wichuraiana	Rw4G019920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	937
AatII	GACGTC	1 cut(s)	1855
AccB7I	CCANNNNNTGG	1 cut(s)	1807
AccBSI	CCGCTC	1 cut(s)	1056
AccII	CGCG	1 cut(s)	2085
AccIII	TCCGGA	1 cut(s)	2452
AciI	CCGC	6 cut(s)	59, 225, 1054, 1768, 2223, 2374
AclWI	GGATC	6 cut(s)	83, 281, 1591, 1604, 1792, 1998
AcsI	RAATTY	9 cut(s)	153, 284, 377, 705, 775, 816, 1153, 1634, 2390
AcuI	CTGAAG	4 cut(s)	1245, 1566, 1659, 1968
AcvI	CACGTG	1 cut(s)	757
AcyI	GRCGYC	1 cut(s)	1852
AfaI	GTAC	7 cut(s)	186, 895, 1384, 2023, 2119, 2331, 2534
AfiI	CCNNNNNNNGG	8 cut(s)	119, 131, 482, 488, 1130, 1464, 1807, 2415
AflIII	ACRYGT	2 cut(s)	307, 756
AhlI	ACTAGT	1 cut(s)	2468
AjnI	CCWGG	4 cut(s)	144, 457, 481, 1174
AleI	CACNNNNGTG	1 cut(s)	2441
AloI	GAACNNNNNNTCC	2 cut(s)	1329, 1361
Alw21I	GWGCWC	3 cut(s)	2303, 2434, 2452
Alw26I	GTCTC	7 cut(s)	106, 311, 796, 923, 2287, 2477, 2557
AlwI	GGATC	6 cut(s)	83, 281, 1591, 1604, 1792, 1998
Ama87I	CYCGRG	1 cut(s)	785
Aor13HI	TCCGGA	1 cut(s)	2452
AoxI	GGCC	4 cut(s)	716, 1085, 1833, 2417
ApeKI	GCWGC	3 cut(s)	1120, 1375, 1941
ApoI	RAATTY	9 cut(s)	153, 284, 377, 705, 775, 816, 1153, 1634, 2390
ArsI	GACNNNNNNTTYG	2 cut(s)	1643, 1675
Asp700I	GAANNNNTTC	3 cut(s)	1516, 1904, 2094
AspLEI	GCGC	1 cut(s)	2085
AspS9I	GGNCC	4 cut(s)	122, 716, 1834, 1916
AsuC2I	CCSGG	3 cut(s)	1131, 2477, 2500
AsuHPI	GGTGA	8 cut(s)	119, 413, 506, 580, 1219, 1474, 2069, 2455
AsuII	TTCGAA	1 cut(s)	1607
AvaI	CYCGRG	1 cut(s)	785
AvaII	GGWCC	2 cut(s)	122, 1916
BamHI	GGATCC	1 cut(s)	1596
BanII	GRGCYC	1 cut(s)	2452
BbrPI	CACGTG	1 cut(s)	757
BbsI	GAAGAC	2 cut(s)	803, 1956
Bbv12I	GWGCWC	3 cut(s)	2303, 2434, 2452
BbvI	GCAGC	3 cut(s)	1132, 1387, 1953
BccI	CCATC	6 cut(s)	430, 589, 648, 1622, 1895, 2428
BceAI	ACGGC	1 cut(s)	2100
BcgI	CGANNNNNNTGC	2 cut(s)	1520, 1554
BciT130I	CCWGG	4 cut(s)	146, 459, 483, 1176
BciVI	GTATCC	2 cut(s)	1423, 2212
BclI	TGATCA	1 cut(s)	2197
BcnI	CCSGG	3 cut(s)	1131, 2477, 2500
BcoDI	GTCTC	7 cut(s)	106, 311, 796, 923, 2287, 2477, 2557
BcuI	ACTAGT	1 cut(s)	2468
BfaI	CTAG	8 cut(s)	119, 126, 824, 852, 1007, 2031, 2150, 2469
BfmI	CTRYAG	2 cut(s)	1373, 1722
BfuI	GTATCC	2 cut(s)	1423, 2212
BglII	AGATCT	2 cut(s)	907, 1726
BisI	GCNGC	4 cut(s)	1121, 1376, 1769, 1942
BlpI	GCTNAGC	2 cut(s)	360, 1043
BlsI	GCNGC	4 cut(s)	1122, 1377, 1770, 1943
BmcAI	AGTACT	1 cut(s)	2023
Bme1390I	CCNGG	7 cut(s)	146, 459, 483, 1131, 1176, 2477, 2500
Bme18I	GGWCC	2 cut(s)	122, 1916
BmeT110I	CYCGRG	1 cut(s)	785
BmgT120I	GGNCC	4 cut(s)	122, 716, 1834, 1916
BmiI	GGNNCC	9 cut(s)	480, 717, 1147, 1598, 1836, 1901, 1918, 2038, 2214
BmrFI	CCNGG	7 cut(s)	146, 459, 483, 1131, 1176, 2477, 2500
BmrI	ACTGGG	1 cut(s)	1038
BmsI	GCATC	6 cut(s)	199, 1486, 1528, 1696, 1924, 2143
BmuI	ACTGGG	1 cut(s)	1038
BpiI	GAAGAC	2 cut(s)	803, 1956
BpmI	CTGGAG	5 cut(s)	60, 480, 510, 523, 1492
Bpu10I	CCTNAGC	1 cut(s)	114
Bpu1102I	GCTNAGC	2 cut(s)	360, 1043
Bpu14I	TTCGAA	1 cut(s)	1607
BpuEI	CTTGAG	3 cut(s)	1042, 1298, 1968
BpuMI	CCSGG	3 cut(s)	1131, 2477, 2500
BsaAI	YACGTR	1 cut(s)	757
BsaHI	GRCGYC	1 cut(s)	1852
BsaI	GGTCTC	3 cut(s)	311, 796, 2557
BsaJI	CCNNGG	6 cut(s)	31, 235, 619, 719, 1174, 1458
BsaWI	WCCGGW	3 cut(s)	475, 2215, 2452
BsaXI	ACNNNNNCTCC	2 cut(s)	2537, 2567
Bsc4I	CCNNNNNNNGG	8 cut(s)	119, 131, 482, 488, 1130, 1464, 1807, 2415
Bse3DI	GCAATG	3 cut(s)	918, 1765, 2286
BseAI	TCCGGA	1 cut(s)	2452
BseBI	CCWGG	4 cut(s)	146, 459, 483, 1176
BseDI	CCNNGG	6 cut(s)	31, 235, 619, 719, 1174, 1458
BseGI	GGATG	8 cut(s)	376, 1454, 1501, 1543, 1887, 2012, 2392, 2420
BseLI	CCNNNNNNNGG	8 cut(s)	119, 131, 482, 488, 1130, 1464, 1807, 2415
BseMI	GCAATG	3 cut(s)	918, 1765, 2286
BseMII	CTCAG	6 cut(s)	105, 374, 1107, 1463, 2123, 2252
BseRI	GAGGAG	3 cut(s)	779, 982, 2049
BseXI	GCAGC	3 cut(s)	1132, 1387, 1953
BseYI	CCCAGC	1 cut(s)	1892
BsgI	GTGCAG	1 cut(s)	1422
Bsh1236I	CGCG	1 cut(s)	2085
BshFI	GGCC	4 cut(s)	718, 1087, 1835, 2419
BsiHKAI	GWGCWC	3 cut(s)	2303, 2434, 2452
BsiHKCI	CYCGRG	1 cut(s)	785
BsiSI	CCGG	7 cut(s)	476, 1039, 1130, 2216, 2453, 2477, 2499
BslFI	GGGAC	3 cut(s)	216, 403, 1902
BslI	CCNNNNNNNGG	8 cut(s)	119, 131, 482, 488, 1130, 1464, 1807, 2415
BsmAI	GTCTC	7 cut(s)	106, 311, 796, 923, 2287, 2477, 2557
BsmFI	GGGAC	3 cut(s)	216, 403, 1902
BsmI	GAATGC	4 cut(s)	64, 668, 871, 1111
BsnI	GGCC	4 cut(s)	718, 1087, 1835, 2419
Bso31I	GGTCTC	3 cut(s)	311, 796, 2557
BsoBI	CYCGRG	1 cut(s)	785
Bsp119I	TTCGAA	1 cut(s)	1607
Bsp1286I	GDGCHC	3 cut(s)	2303, 2434, 2452
Bsp13I	TCCGGA	1 cut(s)	2452
Bsp143I	GATC	9 cut(s)	88, 273, 907, 1063, 1596, 1726, 1797, 1990, 2197
Bsp1720I	GCTNAGC	2 cut(s)	360, 1043
Bsp19I	CCATGG	3 cut(s)	31, 235, 619
BspACI	CCGC	6 cut(s)	59, 225, 1054, 1768, 2223, 2374
BspANI	GGCC	4 cut(s)	718, 1087, 1835, 2419
BspCNI	CTCAG	6 cut(s)	106, 373, 1108, 1464, 2122, 2251
BspEI	TCCGGA	1 cut(s)	2452
BspFNI	CGCG	1 cut(s)	2085
BspHI	TCATGA	1 cut(s)	2098
BspLI	GGNNCC	9 cut(s)	480, 717, 1147, 1598, 1836, 1901, 1918, 2038, 2214
BspMAI	CTGCAG	2 cut(s)	1377, 1726
BspPI	GGATC	6 cut(s)	83, 281, 1591, 1604, 1792, 1998
BspT104I	TTCGAA	1 cut(s)	1607
BspTNI	GGTCTC	3 cut(s)	311, 796, 2557
BsrBI	CCGCTC	1 cut(s)	1056
BsrDI	GCAATG	3 cut(s)	918, 1765, 2286
BssECI	CCNNGG	6 cut(s)	31, 235, 619, 719, 1174, 1458
BssMI	GATC	9 cut(s)	88, 273, 907, 1063, 1596, 1726, 1797, 1990, 2197
BssNI	GRCGYC	1 cut(s)	1852
BssT1I	CCWWGG	5 cut(s)	31, 235, 619, 719, 1458
Bst2UI	CCWGG	4 cut(s)	146, 459, 483, 1176
Bst4CI	ACNGT	5 cut(s)	1367, 1423, 1717, 1860, 2459
Bst6I	CTCTTC	2 cut(s)	1995, 2372
BstACI	GRCGYC	1 cut(s)	1852
BstAPI	GCANNNNNTGC	2 cut(s)	218, 987
BstBAI	YACGTR	1 cut(s)	757
BstBI	TTCGAA	1 cut(s)	1607
BstC8I	GCNNGC	9 cut(s)	223, 988, 1054, 1098, 1939, 2430, 2434, 2489, 2540
BstDSI	CCRYGG	3 cut(s)	31, 235, 619
BstEII	GGTNACC	2 cut(s)	107, 252
BstENI	CCTNNNNNAGG	1 cut(s)	117
BstF5I	GGATG	8 cut(s)	376, 1454, 1501, 1543, 1887, 2012, 2392, 2420
BstFNI	CGCG	1 cut(s)	2085
BstHHI	GCGC	1 cut(s)	2085
BstKTI	GATC	9 cut(s)	91, 276, 910, 1066, 1599, 1729, 1800, 1993, 2200
BstMAI	GTCTC	7 cut(s)	106, 311, 796, 923, 2287, 2477, 2557
BstMBI	GATC	9 cut(s)	88, 273, 907, 1063, 1596, 1726, 1797, 1990, 2197
BstMWI	GCNNNNNNNGC	9 cut(s)	218, 507, 987, 1053, 1093, 1117, 1279, 2070, 2425
BstNI	CCWGG	4 cut(s)	146, 459, 483, 1176
BstNSI	RCATGY	6 cut(s)	311, 990, 1768, 1941, 2140, 2491
BstPI	GGTNACC	2 cut(s)	107, 252
BstSCI	CCNGG	7 cut(s)	144, 457, 481, 1129, 1174, 2475, 2498
BstSFI	CTRYAG	2 cut(s)	1373, 1722
BstUI	CGCG	1 cut(s)	2085
BstV1I	GCAGC	3 cut(s)	1132, 1387, 1953
BstV2I	GAAGAC	2 cut(s)	803, 1956
BstX2I	RGATCY	5 cut(s)	907, 1596, 1726, 1797, 1990
BstXI	CCANNNNNNTGG	2 cut(s)	270, 1621
BstYI	RGATCY	5 cut(s)	907, 1596, 1726, 1797, 1990
BsuI	GTATCC	2 cut(s)	1423, 2212
BsuRI	GGCC	4 cut(s)	718, 1087, 1835, 2419
BtgI	CCRYGG	3 cut(s)	31, 235, 619
BtgZI	GCGATG	2 cut(s)	615, 1662
BtsCI	GGATG	8 cut(s)	376, 1454, 1501, 1543, 1887, 2012, 2392, 2420
BtsI	GCAGTG	1 cut(s)	888
BtsIMutI	CAGTG	6 cut(s)	888, 1140, 1363, 1713, 2117, 2315
Cac8I	GCNNGC	9 cut(s)	223, 988, 1054, 1098, 1939, 2430, 2434, 2489, 2540
CciI	TCATGA	1 cut(s)	2098
CfoI	GCGC	1 cut(s)	2085
Cfr13I	GGNCC	4 cut(s)	122, 716, 1834, 1916
Csp6I	GTAC	7 cut(s)	185, 894, 1383, 2022, 2118, 2330, 2533
CviQI	GTAC	7 cut(s)	185, 894, 1383, 2022, 2118, 2330, 2533
DpnI	GATC	9 cut(s)	90, 275, 909, 1065, 1598, 1728, 1799, 1992, 2199
DpnII	GATC	9 cut(s)	88, 273, 907, 1063, 1596, 1726, 1797, 1990, 2197
DraI	TTTAAA	4 cut(s)	195, 846, 936, 1845
DrdI	GACNNNNNNGTC	1 cut(s)	937
DseDI	GACNNNNNNGTC	1 cut(s)	937
Eam1104I	CTCTTC	2 cut(s)	1995, 2372
EarI	CTCTTC	2 cut(s)	1995, 2372
Ecl136II	GAGCTC	1 cut(s)	2450
Eco130I	CCWWGG	5 cut(s)	31, 235, 619, 719, 1458
Eco24I	GRGCYC	1 cut(s)	2452
Eco31I	GGTCTC	3 cut(s)	311, 796, 2557
Eco32I	GATATC	1 cut(s)	40
Eco47I	GGWCC	2 cut(s)	122, 1916
Eco53kI	GAGCTC	1 cut(s)	2450
Eco57I	CTGAAG	4 cut(s)	1245, 1566, 1659, 1968
Eco72I	CACGTG	1 cut(s)	757
Eco88I	CYCGRG	1 cut(s)	785
Eco91I	GGTNACC	2 cut(s)	107, 252
EcoICRI	GAGCTC	1 cut(s)	2450
EcoNI	CCTNNNNNAGG	1 cut(s)	117
EcoO109I	RGGNCCY	2 cut(s)	122, 1916
EcoO65I	GGTNACC	2 cut(s)	107, 252
EcoRI	GAATTC	2 cut(s)	1153, 1634
EcoRII	CCWGG	4 cut(s)	144, 457, 481, 1174
EcoRV	GATATC	1 cut(s)	40
EcoT14I	CCWWGG	5 cut(s)	31, 235, 619, 719, 1458
EcoT22I	ATGCAT	1 cut(s)	1939
EcoT38I	GRGCYC	1 cut(s)	2452
ErhI	CCWWGG	5 cut(s)	31, 235, 619, 719, 1458
FaqI	GGGAC	3 cut(s)	216, 403, 1902
FauI	CCCGC	1 cut(s)	1061
FbaI	TGATCA	1 cut(s)	2197
Fnu4HI	GCNGC	4 cut(s)	1121, 1376, 1769, 1942
FokI	GGATG	8 cut(s)	383, 1441, 1508, 1550, 1874, 1999, 2399, 2407
FriOI	GRGCYC	1 cut(s)	2452
Fsp4HI	GCNGC	4 cut(s)	1121, 1376, 1769, 1942
FspBI	CTAG	8 cut(s)	119, 126, 824, 852, 1007, 2031, 2150, 2469
GlaI	GCGC	1 cut(s)	2084
GluI	GCNGC	4 cut(s)	1121, 1376, 1769, 1942
GsaI	CCCAGC	1 cut(s)	1896
GsuI	CTGGAG	5 cut(s)	60, 480, 510, 523, 1492
HaeIII	GGCC	4 cut(s)	718, 1087, 1835, 2419
HapII	CCGG	7 cut(s)	476, 1039, 1130, 2216, 2453, 2477, 2499
HhaI	GCGC	1 cut(s)	2085
Hin1I	GRCGYC	1 cut(s)	1852
Hin6I	GCGC	1 cut(s)	2083
HinP1I	GCGC	1 cut(s)	2083
HincII	GTYRAC	2 cut(s)	1018, 1856
HindII	GTYRAC	2 cut(s)	1018, 1856
HindIII	AAGCTT	4 cut(s)	81, 1271, 1477, 1692
HinfI	GANTC	9 cut(s)	11, 53, 404, 1229, 1517, 1550, 1577, 2104, 2336
HpaII	CCGG	7 cut(s)	476, 1039, 1130, 2216, 2453, 2477, 2499
HphI	GGTGA	8 cut(s)	119, 413, 506, 580, 1219, 1474, 2069, 2455
Hpy166II	GTNNAC	6 cut(s)	590, 1018, 1314, 1419, 1589, 1856
Hpy8I	GTNNAC	6 cut(s)	590, 1018, 1314, 1419, 1589, 1856
HpyAV	CCTTC	5 cut(s)	14, 803, 1204, 2054, 2434
HpyCH4III	ACNGT	5 cut(s)	1367, 1423, 1717, 1860, 2459
HpyCH4IV	ACGT	3 cut(s)	756, 1852, 2068
HpyF10VI	GCNNNNNNNGC	9 cut(s)	218, 507, 987, 1053, 1093, 1117, 1279, 2070, 2425
HpySE526I	ACGT	3 cut(s)	756, 1852, 2068
Hsp92I	GRCGYC	1 cut(s)	1852
HspAI	GCGC	1 cut(s)	2083
Kpn2I	TCCGGA	1 cut(s)	2452
Ksp22I	TGATCA	1 cut(s)	2197
Kzo9I	GATC	9 cut(s)	88, 273, 907, 1063, 1596, 1726, 1797, 1990, 2197
LmnI	GCTCC	7 cut(s)	61, 958, 995, 1292, 1684, 2036, 2455
Lsp1109I	GCAGC	3 cut(s)	1132, 1387, 1953
LweI	GCATC	6 cut(s)	199, 1486, 1528, 1696, 1924, 2143
MaeI	CTAG	8 cut(s)	119, 126, 824, 852, 1007, 2031, 2150, 2469
MaeII	ACGT	3 cut(s)	756, 1852, 2068
MaeIII	GTNAC	6 cut(s)	107, 252, 338, 494, 1717, 1923
MalI	GATC	9 cut(s)	90, 275, 909, 1065, 1598, 1728, 1799, 1992, 2199
MbiI	CCGCTC	1 cut(s)	1056
MboI	GATC	9 cut(s)	88, 273, 907, 1063, 1596, 1726, 1797, 1990, 2197
MboII	GAAGA	9 cut(s)	521, 527, 583, 808, 839, 1559, 1961, 2012, 2389
MfeI	CAATTG	1 cut(s)	204
MflI	RGATCY	5 cut(s)	907, 1596, 1726, 1797, 1990
MhlI	GDGCHC	3 cut(s)	2303, 2434, 2452
MlyI	GAGTC	1 cut(s)	413
MmeI	TCCRAC	2 cut(s)	112, 838
Mph1103I	ATGCAT	1 cut(s)	1939
MroI	TCCGGA	1 cut(s)	2452
MroXI	GAANNNNTTC	3 cut(s)	1516, 1904, 2094
MseI	TTAA	8 cut(s)	194, 375, 845, 935, 1182, 1844, 2049, 2414
MslI	CAYNNNNRTG	1 cut(s)	2441
MspA1I	CMGCKG	2 cut(s)	59, 501
MspI	CCGG	7 cut(s)	476, 1039, 1130, 2216, 2453, 2477, 2499
MspR9I	CCNGG	7 cut(s)	146, 459, 483, 1131, 1176, 2477, 2500
MunI	CAATTG	1 cut(s)	204
Mva1269I	GAATGC	4 cut(s)	64, 668, 871, 1111
MvaI	CCWGG	4 cut(s)	146, 459, 483, 1176
MvnI	CGCG	1 cut(s)	2085
MwoI	GCNNNNNNNGC	9 cut(s)	218, 507, 987, 1053, 1093, 1117, 1279, 2070, 2425
NciI	CCSGG	3 cut(s)	1131, 2477, 2500
NcoI	CCATGG	3 cut(s)	31, 235, 619
NdeII	GATC	9 cut(s)	88, 273, 907, 1063, 1596, 1726, 1797, 1990, 2197
NlaIV	GGNNCC	9 cut(s)	480, 717, 1147, 1598, 1836, 1901, 1918, 2038, 2214
NmuCI	GTSAC	4 cut(s)	107, 338, 494, 1717
NsiI	ATGCAT	1 cut(s)	1939
NspI	RCATGY	6 cut(s)	311, 990, 1768, 1941, 2140, 2491
NspV	TTCGAA	1 cut(s)	1607
OliI	CACNNNNGTG	1 cut(s)	2441
PaeI	GCATGC	3 cut(s)	990, 1941, 2491
PaeR7I	CTCGAG	1 cut(s)	785
PagI	TCATGA	1 cut(s)	2098
PciI	ACATGT	1 cut(s)	307
PcsI	WCGNNNNNNNCGW	1 cut(s)	2535
PctI	GAATGC	4 cut(s)	64, 668, 871, 1111
PdmI	GAANNNNTTC	3 cut(s)	1516, 1904, 2094
PfeI	GAWTC	8 cut(s)	11, 53, 1229, 1517, 1550, 1577, 2104, 2336
PflFI	GACNNNGTC	1 cut(s)	2549
PflMI	CCANNNNNTGG	1 cut(s)	1807
PfoI	TCCNGGA	1 cut(s)	2475
PkrI	GCNGC	4 cut(s)	1122, 1377, 1770, 1943
PleI	GAGTC	1 cut(s)	412
PmaCI	CACGTG	1 cut(s)	757
PmlI	CACGTG	1 cut(s)	757
PpsI	GAGTC	1 cut(s)	412
Ppu21I	YACGTR	1 cut(s)	757
PpuMI	RGGWCCY	2 cut(s)	122, 1916
PscI	ACATGT	1 cut(s)	307
Psp124BI	GAGCTC	1 cut(s)	2452
Psp5II	RGGWCCY	2 cut(s)	122, 1916
Psp6I	CCWGG	4 cut(s)	144, 457, 481, 1174
PspCI	CACGTG	1 cut(s)	757
PspEI	GGTNACC	2 cut(s)	107, 252
PspFI	CCCAGC	1 cut(s)	1892
PspGI	CCWGG	4 cut(s)	144, 457, 481, 1174
PspN4I	GGNNCC	9 cut(s)	480, 717, 1147, 1598, 1836, 1901, 1918, 2038, 2214
PspPI	GGNCC	4 cut(s)	122, 716, 1834, 1916
PspPPI	RGGWCCY	2 cut(s)	122, 1916
PspXI	VCTCGAGB	1 cut(s)	785
PstI	CTGCAG	2 cut(s)	1377, 1726
PsuI	RGATCY	5 cut(s)	907, 1596, 1726, 1797, 1990
PsyI	GACNNNGTC	1 cut(s)	2549
PvuII	CAGCTG	1 cut(s)	501
RsaI	GTAC	7 cut(s)	186, 895, 1384, 2023, 2119, 2331, 2534
RsaNI	GTAC	7 cut(s)	185, 894, 1383, 2022, 2118, 2330, 2533
RseI	CAYNNNNRTG	1 cut(s)	2441
SacI	GAGCTC	1 cut(s)	2452
SaqAI	TTAA	8 cut(s)	194, 375, 845, 935, 1182, 1844, 2049, 2414
SatI	GCNGC	4 cut(s)	1121, 1376, 1769, 1942
Sau3AI	GATC	9 cut(s)	88, 273, 907, 1063, 1596, 1726, 1797, 1990, 2197
Sau96I	GGNCC	4 cut(s)	122, 716, 1834, 1916
ScaI	AGTACT	1 cut(s)	2023
SchI	GAGTC	1 cut(s)	413
ScrFI	CCNGG	7 cut(s)	146, 459, 483, 1131, 1176, 2477, 2500
SduI	GDGCHC	3 cut(s)	2303, 2434, 2452
SfaNI	GCATC	6 cut(s)	199, 1486, 1528, 1696, 1924, 2143
SfcI	CTRYAG	2 cut(s)	1373, 1722
Sfr274I	CTCGAG	1 cut(s)	785
SfuI	TTCGAA	1 cut(s)	1607
SinI	GGWCC	2 cut(s)	122, 1916
SlaI	CTCGAG	1 cut(s)	785
SmiMI	CAYNNNNRTG	1 cut(s)	2441
SmlI	CTYRAG	4 cut(s)	785, 1057, 1277, 1983
SmoI	CTYRAG	4 cut(s)	785, 1057, 1277, 1983
SpeI	ACTAGT	1 cut(s)	2468
SphI	GCATGC	3 cut(s)	990, 1941, 2491
SsiI	CCGC	6 cut(s)	59, 225, 1054, 1768, 2223, 2374
SspI	AATATT	1 cut(s)	1658
SspMI	CTAG	8 cut(s)	119, 126, 824, 852, 1007, 2031, 2150, 2469
SstI	GAGCTC	1 cut(s)	2452
StyD4I	CCNGG	7 cut(s)	144, 457, 481, 1129, 1174, 2475, 2498
StyI	CCWWGG	5 cut(s)	31, 235, 619, 719, 1458
TaaI	ACNGT	5 cut(s)	1367, 1423, 1717, 1860, 2459
TaiI	ACGT	3 cut(s)	759, 1855, 2071
TaqI	TCGA	4 cut(s)	786, 794, 1607, 2358
TatI	WGTACW	1 cut(s)	2021
TauI	GCSGC	1 cut(s)	1771
TfiI	GAWTC	8 cut(s)	11, 53, 1229, 1517, 1550, 1577, 2104, 2336
Tru1I	TTAA	8 cut(s)	194, 375, 845, 935, 1182, 1844, 2049, 2414
Tru9I	TTAA	8 cut(s)	194, 375, 845, 935, 1182, 1844, 2049, 2414
TscAI	CASTG	6 cut(s)	888, 1147, 1370, 1720, 2117, 2322
TseFI	GTSAC	4 cut(s)	107, 338, 494, 1717
TseI	GCWGC	3 cut(s)	1120, 1375, 1941
Tsp45I	GTSAC	4 cut(s)	107, 338, 494, 1717
TspRI	CASTG	6 cut(s)	888, 1147, 1370, 1720, 2117, 2322
Tth111I	GACNNNGTC	1 cut(s)	2549
Van91I	CCANNNNNTGG	1 cut(s)	1807
VpaK11BI	GGWCC	2 cut(s)	122, 1916
XagI	CCTNNNNNAGG	1 cut(s)	117
XapI	RAATTY	9 cut(s)	153, 284, 377, 705, 775, 816, 1153, 1634, 2390
XbaI	TCTAGA	2 cut(s)	2030, 2149
XceI	RCATGY	6 cut(s)	311, 990, 1768, 1941, 2140, 2491
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1156, 2329
XhoI	CTCGAG	1 cut(s)	785
XmnI	GAANNNNTTC	3 cut(s)	1516, 1904, 2094
XspI	CTAG	8 cut(s)	119, 126, 824, 852, 1007, 2031, 2150, 2469
ZraI	GACGTC	1 cut(s)	1853
ZrmI	AGTACT	1 cut(s)	2023
Zsp2I	ATGCAT	1 cut(s)	1939

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.