Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0006481

Physical Location & Seq

Genomic Coordinates Reverse (-)

14393689 .. 14398920

Gene Structure 5232 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1171500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2541 bp

ATGATGGATTCAGTTGAAGGAAATAGCCATGGGGATATCAATGACGATGAAGCTGAGCATTCATTTTCTCCAGAAGCTTCTGATATATGTGGTGTCTCTGGTGACCCTGAGCTAGGTCCTAGAGTTGGAGATGAGTACCAGGCTGAAATTCCCTGTCTACTAGCTGTTTCTGACTATATACGGCTTTTAAAAAACCCAACTGATGCAGAAATTTCTGGCGGTAGTCCCTGTGGTTTAGTAATGGGTTTGCCTGTACCAGTAATGTGGATCAGCGAGGAATTGGACACCAAAAAATATGAACATGTCGGAGAGACCTTGATTGATTCAGAAAGTGACAATGTAAAGTGCAAAGCTGATCCAACGGATGCTAAGTCCGATAATGTGAAAACATCTGGCGAGTCAGAAAATCTAGTATTGAAACAAGAAAGGAAGGCTGAAATGCATCAAAAGCCTGGAGGAGTGTACTGTCCGGTTCCTGGTTCTGCAGGAGACAATTGGATTGACATGGAAGAAGCCAGTTTTCTTCTTGGTTTATATATCTTTGAGAGGAACCTCGTTCTGGTGAAGAAGTTTGTCGGAAGCAAACAAATGGGTGATATTTTGTCATTCTACTATGGGAAATTTTACAAGTCTGACAGATACAAGAGATGGAAAGAATGCAAAAAAATGAGAAGCAGAAAATGTATATTTGGGCAAAGAATTTTTACTGGGCCAAGGCAACATGAGTTGTTTTCTCGTTTGTTTCCTCACGTGTCAGAAGAATGCCAAACTTCTTTGCTTGAGGTCTCGAAGACATTTGGGGAAGGAAAAATTTTACTAGAAGAATATGTATTAATTTTAAAGGCTAGAGTTGGATTGAATGCACTGGTAAAGGCAGTGGGAATTGGTACAGGAAAGAAAGATCTCACAGGCATTGCCACAGAGACTTTAAAGTCCAATCAGGTTGCTCCCGTTCGCCCAGAAATACCAACTGGCAAAGCATGCTCCACCCTTACGCCACTAGAAATAGTCAACTTTCTAACAGGGGGCTTCCGGCTAAGCAAAGCCCGCTCGAGCGATCTCTTTTGGGAAGCTGTCTGGCCTCGTTTGCTTGAAAGAGGGTGGCACTCTGAGCAGCCTTATCCGGGTTTCTCCACTGGTTCCAGGAATTCATTGGTCTTTCTTATCCCTGGTATTAAGAAATTCTCAAGAAGGAAACTGGTGAAGGGATCCCACTACTTTGATTCGGTAAGTGACGTCCTGAATAAAGTTGCTTCAGACCCTGAGCTTCTTGAGCTTGAAATGGGAGCAAATAAAGAAAATGGGTGGACAGATGAAACAAAGCTGGACGAACAAGACTTCCCAAATCAGCAACGTCACTGTTATCTGCAGCCTCGTACTCCAAATCGTAGTAGTACAAATGTCATGAAGTTTACGGTTGTGGATACTAGTCTGTCTAATGGGAAAATATTCAAGGTGAGGGAACTGAGAAGCTTACCGCTTGAATTGGATGTCTCCGCCTCCAGAAGTGATTCTGAAGATGACGATGAGGATGCTTCTGAGGATTCAGCAGATAAATATAATTCTGCTAATTCCTTGTGTTCACAGAGGGATGAGATCCACGTTTTGAAGTCCATCCGTTTGGGTAGAAATGGTGACAAATATTTTAAATATGGTACTTCAGAGGTGGAACATCAAGCTTTTGGTCAAGGTTCGACTACTGTGACTGCAGATCTCCCCAAGAATGAGAACATTGGTACATGCAACGACATGCAGCGCCGGAAAGCTATGAAGTGCCAAAAAAGCCGGAAAATGGTTTCTGAAAATGAAAATCATCTTGCCCCTGTTTCAAAAAGACGTCGACGGTTAGCTGCTTGTAGTCGCACAGAGATCACCCCCAGCAGGAGCCAGTTCTTGCAAGGTCCCATGTTACAACAAGATGTGTCTGGAGACCATGCGGCACTTGGTGAGAAAACTCCTTCTCAAGTGGAACCATCTGGAGAGAAGTTATCATCCGCCAGTACTTCGCCTAGAGGAGCCAGCCCAGTTGATAGTGGTGAAGGCAATCGTTGTGGCAACAGTTTGCCTGTGGAAATATTCCAAGAGAATCCTCAGCGCCCTATGTTGATTGACTTGAACATGCCCCCGCCTCTAGATGCTGAAACTGATGAACCTTTCACAATGATAGAAAGACAAGATGATCAAACACACCAGGAACCAGATGCTGCTTCCCATTCAGTGAATCCCTCTGAAAGTGGGGCAACTTCTGAACAGCAGCCTGCAATGAACTCTCGGAGACAGAGCACAAGAAACCGACCACTGAGCACTAAGGTACTGGAATCTTTAGCTTATGGATTTTTAGACACAAAACAGAAGCGGAAGAGTAGGGACGAATTTCCCCAAGACACCTCCAAATTAAGGCCATCCAGGCGTGCTCGTACTAAGGTGAGCGATCTCAACAGTTTTGATACTAGTCTCCCGGATTTCAGTATGCAGGAAACCAGGAGTGCTATCCCCAATAACAACGCTGACGGGTACAGTGAACTTGATATGGTCTCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

847

Amino Acids

94.24

Weight (kDa)

5.68

Isoelectric Point (pI)

50.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7952	PF25826	166 - 296	5.5e-62	Domain of unknown function (DUF7952)
DUF7650	PF24662	335 - 421	4.5e-43	Domain of unknown function (DUF7650)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47820 AT2G47820
fragaria_vesca	FvH4_4g17850 FvH4_4g17850 FvH4_4g17850
malus_domestica	MD03G1283800.v1.1 MD13G1170000.v1.1 MD16G1171500.v1.1
prunus_persica	Prupe.1G138300_v2.0.a1 Prupe.1G138300_v2.0.a1 Prupe.1G138300_v2.0.a1 Prupe.8G255900_v2.0.a1
pyrus_communis	pycom13g14550 pycom16g14380
rosa_chinensis	RchiOBHm_Chr4g0421961
rosa_laevigata	RLG00000007650
rosa_multiflora	Rmu_co7962282.1_g000001 Rmu_sc0020808.1_g000003 Rmu_sc0021995.1_g000001
rosa_roxburghii	Rroxscaffold_5G00364050
rosa_rugosa	Rorug04G0176500
rosa_samantha	Rh4AG235500 Rh4BG238800 Rh4CG250200 Rh4DG234300
rosa_wichuraiana	Rw4G019920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	931
AatII	GACGTC	2 cut(s)	1239, 1840
AccBSI	CCGCTC	1 cut(s)	1050
AccI	GTMKAC	2 cut(s)	157, 1840
AciI	CCGC	8 cut(s)	219, 1048, 1478, 1497, 1937, 1995, 2126, 2356
AclWI	GGATC	5 cut(s)	275, 350, 1203, 1216, 1591
AcsI	RAATTY	8 cut(s)	147, 210, 620, 699, 810, 1147, 1181, 2372
AcuI	CTGAAG	3 cut(s)	1239, 1536, 1644
AcvI	CACGTG	1 cut(s)	751
AcyI	GRCGYC	2 cut(s)	1236, 1837
AdeI	CACNNNGTG	1 cut(s)	1946
AfiI	CCNNNNNNNGG	8 cut(s)	113, 125, 476, 559, 1124, 1792, 1881, 2397
AflIII	ACRYGT	2 cut(s)	301, 750
AhlI	ACTAGT	2 cut(s)	1427, 2450
AjnI	CCWGG	8 cut(s)	138, 451, 475, 1142, 1168, 2190, 2405, 2480
AloI	GAACNNNNNNTCC	2 cut(s)	1323, 1355
Alw21I	GWGCWC	3 cut(s)	2285, 2306, 2416
Alw26I	GTCTC	9 cut(s)	100, 305, 483, 790, 917, 1498, 1923, 2269, 2459
AlwI	GGATC	5 cut(s)	275, 350, 1203, 1216, 1591
AlwNI	CAGNNNCTG	2 cut(s)	1262, 2204
Ama87I	CYCGRG	1 cut(s)	1051
AoxI	GGCC	3 cut(s)	710, 1079, 2399
ApeKI	GCWGC	6 cut(s)	1114, 1369, 1753, 1850, 2204, 2254
ApoI	RAATTY	8 cut(s)	147, 210, 620, 699, 810, 1147, 1181, 2372
AseI	ATTAAT	1 cut(s)	833
Asp700I	GAANNNNTTC	2 cut(s)	1448, 1510
AspLEI	GCGC	2 cut(s)	1758, 2097
AspS9I	GGNCC	3 cut(s)	116, 710, 1901
AsuC2I	CCSGG	2 cut(s)	1125, 2459
AvaI	CYCGRG	1 cut(s)	1051
AvaII	GGWCC	2 cut(s)	116, 1901
BamHI	GGATCC	1 cut(s)	1208
BbrPI	CACGTG	1 cut(s)	751
BbsI	GAAGAC	1 cut(s)	797
Bbv12I	GWGCWC	3 cut(s)	2285, 2306, 2416
BbvCI	CCTCAGC	1 cut(s)	2091
BbvI	GCAGC	6 cut(s)	1126, 1381, 1765, 1837, 2191, 2266
BccI	CCATC	4 cut(s)	642, 1622, 1981, 2410
BceAI	ACGGC	1 cut(s)	197
BcgI	CGANNNNNNTGC	2 cut(s)	1514, 1548
BciT130I	CCWGG	8 cut(s)	140, 453, 477, 1144, 1170, 2192, 2407, 2482
BciVI	GTATCC	1 cut(s)	1417
BclI	TGATCA	1 cut(s)	2179
BcnI	CCSGG	2 cut(s)	1125, 2459
BcoDI	GTCTC	9 cut(s)	100, 305, 483, 790, 917, 1498, 1923, 2269, 2459
BcuI	ACTAGT	2 cut(s)	1427, 2450
BfmI	CTRYAG	3 cut(s)	483, 1367, 1707
BfoI	RGCGCY	2 cut(s)	1759, 2098
BfuI	GTATCC	1 cut(s)	1417
BglI	GCCNNNNNGGC	1 cut(s)	2407
BglII	AGATCT	2 cut(s)	901, 1711
BisI	GCNGC	7 cut(s)	1115, 1370, 1754, 1851, 1938, 2205, 2255
BlpI	GCTNAGC	2 cut(s)	54, 1037
BlsI	GCNGC	7 cut(s)	1116, 1371, 1755, 1852, 1939, 2206, 2256
BmcAI	AGTACT	1 cut(s)	2002
Bme18I	GGWCC	2 cut(s)	116, 1901
BmeT110I	CYCGRG	1 cut(s)	1051
BmgT120I	GGNCC	3 cut(s)	116, 710, 1901
BmiI	GGNNCC	9 cut(s)	474, 551, 1141, 1210, 1886, 1903, 1971, 2017, 2196
BmrI	ACTGGG	2 cut(s)	717, 2018
BmsI	GCATC	6 cut(s)	193, 355, 451, 1522, 2125, 2191
BmuI	ACTGGG	2 cut(s)	717, 2018
BpiI	GAAGAC	1 cut(s)	797
BpmI	CTGGAG	5 cut(s)	54, 474, 1486, 1947, 1998
Bpu10I	CCTNAGC	3 cut(s)	108, 1263, 2091
Bpu1102I	GCTNAGC	2 cut(s)	54, 1037
BpuEI	CTTGAG	4 cut(s)	800, 1171, 1292, 1947
BpuMI	CCSGG	2 cut(s)	1125, 2459
BsaAI	YACGTR	1 cut(s)	751
BsaHI	GRCGYC	2 cut(s)	1236, 1837
BsaI	GGTCTC	3 cut(s)	305, 790, 1923
BsaJI	CCNNGG	3 cut(s)	28, 713, 1168
BsaWI	WCCGGW	1 cut(s)	469
Bsc4I	CCNNNNNNNGG	8 cut(s)	113, 125, 476, 559, 1124, 1792, 1881, 2397
Bse3DI	GCAATG	2 cut(s)	912, 2268
BseBI	CCWGG	8 cut(s)	140, 453, 477, 1144, 1170, 2192, 2407, 2482
BseDI	CCNNGG	3 cut(s)	28, 713, 1168
BseGI	GGATG	7 cut(s)	370, 1495, 1537, 1597, 1614, 1991, 2402
BseLI	CCNNNNNNNGG	8 cut(s)	113, 125, 476, 559, 1124, 1792, 1881, 2397
BseMI	GCAATG	2 cut(s)	912, 2268
BseMII	CTCAG	8 cut(s)	45, 99, 1101, 1254, 1457, 1530, 2105, 2291
BseRI	GAGGAG	2 cut(s)	471, 2028
BseXI	GCAGC	6 cut(s)	1126, 1381, 1765, 1837, 2191, 2266
BseYI	CCCAGC	1 cut(s)	1877
BshFI	GGCC	3 cut(s)	712, 1081, 2401
BsiHKAI	GWGCWC	3 cut(s)	2285, 2306, 2416
BsiHKCI	CYCGRG	1 cut(s)	1051
BsiSI	CCGG	6 cut(s)	470, 1033, 1124, 1759, 1786, 2459
BslFI	GGGAC	3 cut(s)	210, 1887, 2381
BslI	CCNNNNNNNGG	8 cut(s)	113, 125, 476, 559, 1124, 1792, 1881, 2397
BsmAI	GTCTC	9 cut(s)	100, 305, 483, 790, 917, 1498, 1923, 2269, 2459
BsmFI	GGGAC	3 cut(s)	210, 1887, 2381
BsmI	GAATGC	4 cut(s)	58, 662, 767, 865
BsnI	GGCC	3 cut(s)	712, 1081, 2401
Bso31I	GGTCTC	3 cut(s)	305, 790, 1923
BsoBI	CYCGRG	1 cut(s)	1051
Bsp1286I	GDGCHC	3 cut(s)	2285, 2306, 2416
Bsp1720I	GCTNAGC	2 cut(s)	54, 1037
Bsp19I	CCATGG	1 cut(s)	28
BspACI	CCGC	8 cut(s)	219, 1048, 1478, 1497, 1937, 1995, 2126, 2356
BspANI	GGCC	3 cut(s)	712, 1081, 2401
BspCNI	CTCAG	8 cut(s)	46, 100, 1102, 1255, 1458, 1531, 2104, 2292
BspHI	TCATGA	1 cut(s)	1404
BspLI	GGNNCC	9 cut(s)	474, 551, 1141, 1210, 1886, 1903, 1971, 2017, 2196
BspMAI	CTGCAG	3 cut(s)	487, 1371, 1711
BspPI	GGATC	5 cut(s)	275, 350, 1203, 1216, 1591
BspTNI	GGTCTC	3 cut(s)	305, 790, 1923
BsrBI	CCGCTC	1 cut(s)	1050
BsrDI	GCAATG	2 cut(s)	912, 2268
BssECI	CCNNGG	3 cut(s)	28, 713, 1168
BssNI	GRCGYC	2 cut(s)	1236, 1837
BssT1I	CCWWGG	2 cut(s)	28, 713
Bst2UI	CCWGG	8 cut(s)	140, 453, 477, 1144, 1170, 2192, 2407, 2482
Bst4CI	ACNGT	8 cut(s)	467, 1361, 1417, 1702, 1845, 2060, 2441, 2519
Bst6I	CTCTTC	1 cut(s)	2354
BstACI	GRCGYC	2 cut(s)	1236, 1837
BstAPI	GCANNNNNTGC	1 cut(s)	981
BstBAI	YACGTR	1 cut(s)	751
BstC8I	GCNNGC	5 cut(s)	982, 1048, 2020, 2259, 2412
BstDSI	CCRYGG	1 cut(s)	28
BstEII	GGTNACC	1 cut(s)	101
BstENI	CCTNNNNNAGG	1 cut(s)	111
BstF5I	GGATG	7 cut(s)	370, 1495, 1537, 1597, 1614, 1991, 2402
BstH2I	RGCGCY	2 cut(s)	1759, 2098
BstHHI	GCGC	2 cut(s)	1758, 2097
BstMAI	GTCTC	9 cut(s)	100, 305, 483, 790, 917, 1498, 1923, 2269, 2459
BstMWI	GCNNNNNNNGC	8 cut(s)	448, 981, 1047, 1087, 1111, 1273, 1782, 2407
BstNI	CCWGG	8 cut(s)	140, 453, 477, 1144, 1170, 2192, 2407, 2482
BstNSI	RCATGY	5 cut(s)	305, 984, 1743, 1753, 2122
BstPI	GGTNACC	1 cut(s)	101
BstSFI	CTRYAG	3 cut(s)	483, 1367, 1707
BstV1I	GCAGC	6 cut(s)	1126, 1381, 1765, 1837, 2191, 2266
BstV2I	GAAGAC	1 cut(s)	797
BstX2I	RGATCY	4 cut(s)	901, 1208, 1596, 1711
BstXI	CCANNNNNNTGG	2 cut(s)	264, 1621
BstYI	RGATCY	4 cut(s)	901, 1208, 1596, 1711
BsuI	GTATCC	1 cut(s)	1417
BsuRI	GGCC	3 cut(s)	712, 1081, 2401
BtgI	CCRYGG	1 cut(s)	28
BtsCI	GGATG	7 cut(s)	370, 1495, 1537, 1597, 1614, 1991, 2402
BtsI	GCAGTG	1 cut(s)	882
BtsIMutI	CAGTG	7 cut(s)	863, 882, 1134, 1357, 2223, 2297, 2524
Cac8I	GCNNGC	5 cut(s)	982, 1048, 2020, 2259, 2412
CaiI	CAGNNNCTG	2 cut(s)	1262, 2204
CciI	TCATGA	1 cut(s)	1404
CfoI	GCGC	2 cut(s)	1758, 2097
Cfr13I	GGNCC	3 cut(s)	116, 710, 1901
CspCI	CAANNNNNGTGG	2 cut(s)	2032, 2067
DraI	TTTAAA	4 cut(s)	189, 840, 930, 1648
DraIII	CACNNNGTG	1 cut(s)	1946
DrdI	GACNNNNNNGTC	1 cut(s)	931
DseDI	GACNNNNNNGTC	1 cut(s)	931
Eam1104I	CTCTTC	1 cut(s)	2354
EarI	CTCTTC	1 cut(s)	2354
EciI	GGCGGA	2 cut(s)	1486, 1984
Eco130I	CCWWGG	2 cut(s)	28, 713
Eco31I	GGTCTC	3 cut(s)	305, 790, 1923
Eco32I	GATATC	1 cut(s)	37
Eco47I	GGWCC	2 cut(s)	116, 1901
Eco57I	CTGAAG	3 cut(s)	1239, 1536, 1644
Eco72I	CACGTG	1 cut(s)	751
Eco88I	CYCGRG	1 cut(s)	1051
Eco91I	GGTNACC	1 cut(s)	101
EcoNI	CCTNNNNNAGG	1 cut(s)	111
EcoO109I	RGGNCCY	2 cut(s)	116, 1901
EcoO65I	GGTNACC	1 cut(s)	101
EcoRI	GAATTC	1 cut(s)	1147
EcoRII	CCWGG	8 cut(s)	138, 451, 475, 1142, 1168, 2190, 2405, 2480
EcoRV	GATATC	1 cut(s)	37
EcoT14I	CCWWGG	2 cut(s)	28, 713
EcoT22I	ATGCAT	1 cut(s)	444
ErhI	CCWWGG	2 cut(s)	28, 713
FaqI	GGGAC	3 cut(s)	210, 1887, 2381
FauI	CCCGC	2 cut(s)	1055, 2133
FbaI	TGATCA	1 cut(s)	2179
FblI	GTMKAC	2 cut(s)	157, 1840
Fnu4HI	GCNGC	7 cut(s)	1115, 1370, 1754, 1851, 1938, 2205, 2255
FokI	GGATG	7 cut(s)	377, 1502, 1544, 1601, 1604, 1978, 2389
Fsp4HI	GCNGC	7 cut(s)	1115, 1370, 1754, 1851, 1938, 2205, 2255
GlaI	GCGC	2 cut(s)	1757, 2096
GluI	GCNGC	7 cut(s)	1115, 1370, 1754, 1851, 1938, 2205, 2255
GsaI	CCCAGC	1 cut(s)	1881
GsuI	CTGGAG	5 cut(s)	54, 474, 1486, 1947, 1998
HaeII	RGCGCY	2 cut(s)	1759, 2098
HaeIII	GGCC	3 cut(s)	712, 1081, 2401
HapII	CCGG	6 cut(s)	470, 1033, 1124, 1759, 1786, 2459
HhaI	GCGC	2 cut(s)	1758, 2097
Hin1I	GRCGYC	2 cut(s)	1236, 1837
Hin6I	GCGC	2 cut(s)	1756, 2095
HinP1I	GCGC	2 cut(s)	1756, 2095
HincII	GTYRAC	2 cut(s)	1012, 1841
HindII	GTYRAC	2 cut(s)	1012, 1841
HindIII	AAGCTT	3 cut(s)	75, 1471, 1677
HinfI	GANTC	9 cut(s)	8, 323, 398, 1223, 1511, 1544, 2086, 2221, 2318
HpaII	CCGG	6 cut(s)	470, 1033, 1124, 1759, 1786, 2459
Hpy166II	GTNNAC	8 cut(s)	158, 463, 1012, 1308, 1413, 1583, 1841, 2522
Hpy8I	GTNNAC	8 cut(s)	158, 463, 1012, 1308, 1413, 1583, 1841, 2522
Hpy99I	CGWCG	2 cut(s)	1842, 1845
HpyAV	CCTTC	7 cut(s)	11, 424, 797, 1185, 1198, 1968, 2033
HpyCH4III	ACNGT	8 cut(s)	467, 1361, 1417, 1702, 1845, 2060, 2441, 2519
HpyCH4IV	ACGT	5 cut(s)	750, 1236, 1354, 1602, 1837
HpyF10VI	GCNNNNNNNGC	8 cut(s)	448, 981, 1047, 1087, 1111, 1273, 1782, 2407
HpySE526I	ACGT	5 cut(s)	750, 1236, 1354, 1602, 1837
Hsp92I	GRCGYC	2 cut(s)	1236, 1837
HspAI	GCGC	2 cut(s)	1756, 2095
Ksp22I	TGATCA	1 cut(s)	2179
LmnI	GCTCC	5 cut(s)	952, 989, 1286, 1884, 2015
Lsp1109I	GCAGC	6 cut(s)	1126, 1381, 1765, 1837, 2191, 2266
LweI	GCATC	6 cut(s)	193, 355, 451, 1522, 2125, 2191
MaeII	ACGT	5 cut(s)	750, 1236, 1354, 1602, 1837
MaeIII	GTNAC	7 cut(s)	101, 332, 1232, 1355, 1634, 1702, 1908
MbiI	CCGCTC	1 cut(s)	1050
MboII	GAAGA	8 cut(s)	515, 521, 577, 770, 802, 833, 1529, 2371
MfeI	CAATTG	1 cut(s)	493
MflI	RGATCY	4 cut(s)	901, 1208, 1596, 1711
MhlI	GDGCHC	3 cut(s)	2285, 2306, 2416
MlyI	GAGTC	1 cut(s)	407
MmeI	TCCRAC	5 cut(s)	106, 286, 383, 556, 832
Mph1103I	ATGCAT	1 cut(s)	444
MroXI	GAANNNNTTC	2 cut(s)	1448, 1510
MseI	TTAA	7 cut(s)	188, 833, 839, 929, 1176, 1647, 2396
MspI	CCGG	6 cut(s)	470, 1033, 1124, 1759, 1786, 2459
MunI	CAATTG	1 cut(s)	493
Mva1269I	GAATGC	4 cut(s)	58, 662, 767, 865
MvaI	CCWGG	8 cut(s)	140, 453, 477, 1144, 1170, 2192, 2407, 2482
MwoI	GCNNNNNNNGC	8 cut(s)	448, 981, 1047, 1087, 1111, 1273, 1782, 2407
NciI	CCSGG	2 cut(s)	1125, 2459
NcoI	CCATGG	1 cut(s)	28
NlaIV	GGNNCC	9 cut(s)	474, 551, 1141, 1210, 1886, 1903, 1971, 2017, 2196
NmuCI	GTSAC	6 cut(s)	101, 332, 1232, 1355, 1634, 1702
NsiI	ATGCAT	1 cut(s)	444
NspI	RCATGY	5 cut(s)	305, 984, 1743, 1753, 2122
PaeI	GCATGC	1 cut(s)	984
PaeR7I	CTCGAG	1 cut(s)	1051
PagI	TCATGA	1 cut(s)	1404
PciI	ACATGT	1 cut(s)	301
PctI	GAATGC	4 cut(s)	58, 662, 767, 865
PdmI	GAANNNNTTC	2 cut(s)	1448, 1510
PfeI	GAWTC	8 cut(s)	8, 323, 1223, 1511, 1544, 2086, 2221, 2318
PfoI	TCCNGGA	2 cut(s)	1142, 2457
PkrI	GCNGC	7 cut(s)	1116, 1371, 1755, 1852, 1939, 2206, 2256
PleI	GAGTC	1 cut(s)	406
PmaCI	CACGTG	1 cut(s)	751
PmlI	CACGTG	1 cut(s)	751
PpsI	GAGTC	1 cut(s)	406
Ppu21I	YACGTR	1 cut(s)	751
PpuMI	RGGWCCY	2 cut(s)	116, 1901
PscI	ACATGT	1 cut(s)	301
PshBI	ATTAAT	1 cut(s)	833
Psp5II	RGGWCCY	2 cut(s)	116, 1901
Psp6I	CCWGG	8 cut(s)	138, 451, 475, 1142, 1168, 2190, 2405, 2480
PspCI	CACGTG	1 cut(s)	751
PspEI	GGTNACC	1 cut(s)	101
PspFI	CCCAGC	1 cut(s)	1877
PspGI	CCWGG	8 cut(s)	138, 451, 475, 1142, 1168, 2190, 2405, 2480
PspN4I	GGNNCC	9 cut(s)	474, 551, 1141, 1210, 1886, 1903, 1971, 2017, 2196
PspPI	GGNCC	3 cut(s)	116, 710, 1901
PspPPI	RGGWCCY	2 cut(s)	116, 1901
PspXI	VCTCGAGB	1 cut(s)	1051
PstI	CTGCAG	3 cut(s)	487, 1371, 1711
PstNI	CAGNNNCTG	2 cut(s)	1262, 2204
PsuI	RGATCY	4 cut(s)	901, 1208, 1596, 1711
SalI	GTCGAC	1 cut(s)	1839
SaqAI	TTAA	7 cut(s)	188, 833, 839, 929, 1176, 1647, 2396
SatI	GCNGC	7 cut(s)	1115, 1370, 1754, 1851, 1938, 2205, 2255
Sau96I	GGNCC	3 cut(s)	116, 710, 1901
ScaI	AGTACT	1 cut(s)	2002
SchI	GAGTC	1 cut(s)	407
SduI	GDGCHC	3 cut(s)	2285, 2306, 2416
SfaNI	GCATC	6 cut(s)	193, 355, 451, 1522, 2125, 2191
SfcI	CTRYAG	3 cut(s)	483, 1367, 1707
Sfr274I	CTCGAG	1 cut(s)	1051
SgrDI	CGTCGACG	1 cut(s)	1839
SinI	GGWCC	2 cut(s)	116, 1901
SlaI	CTCGAG	1 cut(s)	1051
SmlI	CTYRAG	5 cut(s)	779, 1051, 1186, 1271, 1962
SmoI	CTYRAG	5 cut(s)	779, 1051, 1186, 1271, 1962
SpeI	ACTAGT	2 cut(s)	1427, 2450
SphI	GCATGC	1 cut(s)	984
SsiI	CCGC	8 cut(s)	219, 1048, 1478, 1497, 1937, 1995, 2126, 2356
SspI	AATATT	3 cut(s)	1449, 1643, 2076
StyI	CCWWGG	2 cut(s)	28, 713
TaaI	ACNGT	8 cut(s)	467, 1361, 1417, 1702, 1845, 2060, 2441, 2519
TaiI	ACGT	5 cut(s)	753, 1239, 1357, 1605, 1840
TaqI	TCGA	4 cut(s)	788, 1052, 1694, 1840
TatI	WGTACW	3 cut(s)	462, 1394, 2000
TauI	GCSGC	1 cut(s)	1940
TfiI	GAWTC	8 cut(s)	8, 323, 1223, 1511, 1544, 2086, 2221, 2318
Tru1I	TTAA	7 cut(s)	188, 833, 839, 929, 1176, 1647, 2396
Tru9I	TTAA	7 cut(s)	188, 833, 839, 929, 1176, 1647, 2396
TscAI	CASTG	7 cut(s)	870, 882, 1141, 1364, 2223, 2304, 2524
TseFI	GTSAC	6 cut(s)	101, 332, 1232, 1355, 1634, 1702
TseI	GCWGC	6 cut(s)	1114, 1369, 1753, 1850, 2204, 2254
Tsp45I	GTSAC	6 cut(s)	101, 332, 1232, 1355, 1634, 1702
TspGWI	ACGGA	2 cut(s)	377, 1607
TspRI	CASTG	7 cut(s)	870, 882, 1141, 1364, 2223, 2304, 2524
VpaK11BI	GGWCC	2 cut(s)	116, 1901
VspI	ATTAAT	1 cut(s)	833
XagI	CCTNNNNNAGG	1 cut(s)	111
XapI	RAATTY	8 cut(s)	147, 210, 620, 699, 810, 1147, 1181, 2372
XbaI	TCTAGA	1 cut(s)	2131
XceI	RCATGY	5 cut(s)	305, 984, 1743, 1753, 2122
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1150, 1940
XhoI	CTCGAG	1 cut(s)	1051
XmiI	GTMKAC	2 cut(s)	157, 1840
XmnI	GAANNNNTTC	2 cut(s)	1448, 1510
ZraI	GACGTC	2 cut(s)	1237, 1838
ZrmI	AGTACT	1 cut(s)	2002
Zsp2I	ATGCAT	1 cut(s)	444

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.