Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0006481

Physical Location & Seq

Genomic Coordinates Reverse (-)

10432839 .. 10435878

Gene Structure 3040 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g14380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2301 bp

ATGGGTTTGCCTATACCAGTAATGTGGATCAGCGAGGAATTGGACACCAAAAAATATGAACATGTCGGACAGACCTTGATTGATTCAGAAAGTGACAACGTAAAGTGCAAAGCTGAGCCAATGGATGTTAAGTCCGATAATGTGATAACATCTGGCGAGTCAGAAAATCTAGTATTGAAACAAGAAATGAAGGCTGAAATGCATCAAAAGCCTGGAGGAGTGTACTGTCCAGTTCCTGGTTCTGCAGGAGACAATTGGAGTGACATGGAAGAAGCCAGTTTTCTTCTTGGTTTATATATCTTTGAGAGGAACCTCGTTCTGGTGAAGAAGTTTGTCGGAAGCAAACAAATGGGTGATATTTTGTCATTCTACTATGGGAAATTTTTCAAGTCTGACAGATACAAGAGATGGAAAGAATGCAAAAAAATGAGAAGCAGAAAATGTATATTTGGGCAAAGAATTTTTACTGGGGCAAGGCAACATGAGTTGTTTTCTCGTTTGTTTCCTCACGTGTCAGAAGAATGCCAAACTTCTTTGCTTGAGGTCTCGAAGACATTTGGGGAAGGAAAAATTATACTAGAAGAATATGTATTCATTTTAAGGGCTAGAATTGGATTGAACGCACTGGTGGAGGCAGTGGGAATTGGTACAGGAAAGAAAGATCTCACAGGCAATGCCACAGAGACTTTAAAGTCCAATCAGGTTGCTCCTGTTCGCCCAGAAATACCAACTGGCAAAGCATGCTCCACCCTTACGCCACTAGAAATAGTCAACTTTCTAACAGGGGGCTTCCGGCTAAGCAAAGCCCGCTCGAGCGATCTCTTTTGGGAAGCTGTCTGGCCTCGTTTGCTTGAAAGAGGGTGGCACTCTGAGCAGCCTTATCCGGGTTTCTCCACTGGTTCCAGGAATTCATTGGTCTTTCTTATCCCTGGTATTAAGAAGTTCTCAAGAAGGAAACTGGTGAAGGGATCCCACTACTTTGATTCGGTAAGTGACGTCCTGAATAAAGTTGCTTCAGACCCTGAGCTTCTTGAGCTTGAAATAGGAGCAAATAAAGAAAATGGGTGGACAGATGAAACAAAGCTGGACGAACAAGACTTCCCAAATCAGCAACGTCACTGTTATCTGCAGCCTCGTACTCCAAATCGTAGTAGTACAGATGTCATGAAGTTTACAGTTGTGGATACTAGTCTGTCTAATGGGAAAATATTCAAGGTGAGGGAACTGAGAAGCTTACCGCTTGAATTGGATGTCTCCGCCTCCAGAAGTGATTCTGAAGATGACGACGAGGATGCTTCTGAGGATTCAACAGATAAATATAATTCTGCTAATTCCTTGTGTTCACAGAGGGATGAGATCCACGTTTCGAAGTCCATCCGTTTGGGTAGAAATGGTGACAAATATTTTAAATATGGTACTTCAGAGGTGGAACATCAAGCTTTTGGTCAAGGTTCGACTACTGTGACTGCAGATCTCCCCAAGAATGAGAACATTGGTACATGCAACGACATGCAGAGCCGGAAAGCTATGAAGTGCCAAAAGAGCCGGAAAATGGTTTCTGAAAATGAAAATCATGTTGCCCCTGTTTCAAAAAGACGTCGACAGTTAGCTGCTTGTAGTCGCACAGAGATCACCCCCAGCAGGAGCCAGTTCTTGCAAGGTCCCATGTTACAACAAGATGTTTCTGGAGACCGTGCGGAATTTAGTGAGAAAACTCCCTCTCAAGTGGAACCATCCGGAGAGAAGTTATCATCCGCCAGTACTTTGCCTAGAGGAGCCAGCCCAGTTGATAGTGGTGAAGGCAATCGTCGTGGCAACAGTTTGCCTGTGGAAATATTCCAAGAGAATCCTCAGCGCCCTATGTTGATTGACTTGAACATGCCCCCGCCTCTAGATGCTGAAACTGATGAACCTTTCACAATGATAGAAAGACAAGATGATCAAACACACCAGGAACCAGATATTGCTTCCCATTCAGTGGATCCCTCTGAAAGTGGGGCAACTTCCGAACAGCAGCCTGCAATGAACTCTCGGAGGCAAAGCACAAGAAACCGACCGCTGAGCACTAAGGTACTGGAATCTTTAGCTTATGGATTTTTAGACACAAAACAGAAGCAGAAGAGTAGGGATGAATTTCCCCGAGACAACTCCAAATTAAGGTCATCCAGGCGTGCTCGTACTAAGGTGAGCGATCTCAACAGTTTTGATACTAGTCTCCCGGATTTCAGTATGCAGGAAACCAGGAGTGCTATCCCCAGTAACAACGCTGATGGGTACAGCGAACTTGACATGGTCTCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

767

Amino Acids

86.03

Weight (kDa)

6.09

Isoelectric Point (pI)

53.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7952	PF25826	86 - 216	1.3e-62	Domain of unknown function (DUF7952)
DUF7650	PF24662	255 - 341	3.9e-43	Domain of unknown function (DUF7650)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47820 AT2G47820
fragaria_vesca	FvH4_4g17850 FvH4_4g17850 FvH4_4g17850
malus_domestica	MD03G1283800.v1.1 MD13G1170000.v1.1 MD16G1171500.v1.1
prunus_persica	Prupe.1G138300_v2.0.a1 Prupe.1G138300_v2.0.a1 Prupe.1G138300_v2.0.a1 Prupe.8G255900_v2.0.a1
pyrus_communis	pycom13g14550 pycom16g14380
rosa_chinensis	RchiOBHm_Chr4g0421961
rosa_laevigata	RLG00000007650
rosa_multiflora	Rmu_co7962282.1_g000001 Rmu_sc0020808.1_g000003 Rmu_sc0021995.1_g000001
rosa_roxburghii	Rroxscaffold_5G00364050
rosa_rugosa	Rorug04G0176500
rosa_samantha	Rh4AG235500 Rh4BG238800 Rh4CG250200 Rh4DG234300
rosa_wichuraiana	Rw4G019920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	691
AatII	GACGTC	2 cut(s)	999, 1600
AccB7I	CCANNNNNTGG	2 cut(s)	236, 1978
AccBSI	CCGCTC	1 cut(s)	810
AccI	GTMKAC	1 cut(s)	1600
AccIII	TCCGGA	1 cut(s)	1736
AciI	CCGC	7 cut(s)	808, 1238, 1257, 1697, 1755, 1886, 2057
AclWI	GGATC	6 cut(s)	35, 963, 976, 1351, 1976, 1989
AcsI	RAATTY	5 cut(s)	380, 459, 907, 1700, 2132
AcuI	CTGAAG	3 cut(s)	999, 1296, 1404
AcvI	CACGTG	1 cut(s)	511
AcyI	GRCGYC	2 cut(s)	996, 1597
AfiI	CCNNNNNNNGG	7 cut(s)	236, 319, 884, 1552, 1641, 1978, 2157
AflIII	ACRYGT	2 cut(s)	61, 510
AhlI	ACTAGT	2 cut(s)	1187, 2210
AjnI	CCWGG	7 cut(s)	211, 235, 902, 928, 1950, 2165, 2240
AloI	GAACNNNNNNTCC	2 cut(s)	1083, 1115
Alw21I	GWGCWC	2 cut(s)	2066, 2176
Alw26I	GTCTC	7 cut(s)	243, 550, 677, 1258, 1683, 2136, 2219
AlwI	GGATC	6 cut(s)	35, 963, 976, 1351, 1976, 1989
AlwNI	CAGNNNCTG	2 cut(s)	236, 1022
Ama87I	CYCGRG	2 cut(s)	811, 2139
Aor13HI	TCCGGA	1 cut(s)	1736
AoxI	GGCC	1 cut(s)	839
ApeKI	GCWGC	4 cut(s)	874, 1129, 1610, 2014
ApoI	RAATTY	5 cut(s)	380, 459, 907, 1700, 2132
Asp700I	GAANNNNTTC	3 cut(s)	383, 1208, 1270
AspLEI	GCGC	1 cut(s)	1857
AspS9I	GGNCC	1 cut(s)	1661
AsuC2I	CCSGG	2 cut(s)	885, 2219
AsuHPI	GGTGA	8 cut(s)	334, 365, 973, 1228, 1406, 1624, 1808, 2197
AsuII	TTCGAA	1 cut(s)	1367
AvaI	CYCGRG	2 cut(s)	811, 2139
AvaII	GGWCC	1 cut(s)	1661
BamHI	GGATCC	2 cut(s)	968, 1981
BbrPI	CACGTG	1 cut(s)	511
BbsI	GAAGAC	1 cut(s)	557
Bbv12I	GWGCWC	2 cut(s)	2066, 2176
BbvCI	CCTCAGC	1 cut(s)	1851
BbvI	GCAGC	4 cut(s)	886, 1141, 1597, 2026
BccI	CCATC	4 cut(s)	402, 1382, 1741, 2264
BcgI	CGANNNNNNTGC	2 cut(s)	1274, 1308
BciT130I	CCWGG	7 cut(s)	213, 237, 904, 930, 1952, 2167, 2242
BciVI	GTATCC	1 cut(s)	1177
BclI	TGATCA	1 cut(s)	1939
BcnI	CCSGG	2 cut(s)	885, 2219
BcoDI	GTCTC	7 cut(s)	243, 550, 677, 1258, 1683, 2136, 2219
BcuI	ACTAGT	2 cut(s)	1187, 2210
BfaI	CTAG	8 cut(s)	170, 578, 606, 761, 1188, 1770, 1892, 2211
BfmI	CTRYAG	3 cut(s)	243, 1127, 1467
BfoI	RGCGCY	1 cut(s)	1858
BfuI	GTATCC	1 cut(s)	1177
BglII	AGATCT	2 cut(s)	661, 1471
BisI	GCNGC	4 cut(s)	875, 1130, 1611, 2015
BlpI	GCTNAGC	3 cut(s)	114, 797, 2060
BlsI	GCNGC	4 cut(s)	876, 1131, 1612, 2016
BmcAI	AGTACT	1 cut(s)	1762
Bme1390I	CCNGG	9 cut(s)	213, 237, 885, 904, 930, 1952, 2167, 2219, 2242
Bme18I	GGWCC	1 cut(s)	1661
BmeT110I	CYCGRG	2 cut(s)	811, 2139
BmgT120I	GGNCC	1 cut(s)	1661
BmiI	GGNNCC	9 cut(s)	311, 901, 970, 1646, 1663, 1731, 1777, 1956, 1983
BmrFI	CCNGG	9 cut(s)	213, 237, 885, 904, 930, 1952, 2167, 2219, 2242
BmrI	ACTGGG	3 cut(s)	477, 1778, 2250
BmsI	GCATC	3 cut(s)	211, 1282, 1885
BmuI	ACTGGG	3 cut(s)	477, 1778, 2250
BpiI	GAAGAC	1 cut(s)	557
BpmI	CTGGAG	3 cut(s)	234, 1246, 1707
Bpu10I	CCTNAGC	2 cut(s)	1023, 1851
Bpu1102I	GCTNAGC	3 cut(s)	114, 797, 2060
Bpu14I	TTCGAA	1 cut(s)	1367
BpuEI	CTTGAG	4 cut(s)	560, 931, 1052, 1707
BpuMI	CCSGG	2 cut(s)	885, 2219
BsaAI	YACGTR	1 cut(s)	511
BsaHI	GRCGYC	2 cut(s)	996, 1597
BsaI	GGTCTC	2 cut(s)	550, 1683
BsaJI	CCNNGG	1 cut(s)	928
BsaWI	WCCGGW	1 cut(s)	1736
Bsc4I	CCNNNNNNNGG	7 cut(s)	236, 319, 884, 1552, 1641, 1978, 2157
Bse3DI	GCAATG	2 cut(s)	679, 2028
BseAI	TCCGGA	1 cut(s)	1736
BseBI	CCWGG	7 cut(s)	213, 237, 904, 930, 1952, 2167, 2242
BseDI	CCNNGG	1 cut(s)	928
BseGI	GGATG	9 cut(s)	130, 1255, 1297, 1357, 1374, 1733, 1751, 2134, 2162
BseLI	CCNNNNNNNGG	7 cut(s)	236, 319, 884, 1552, 1641, 1978, 2157
BseMI	GCAATG	2 cut(s)	679, 2028
BseMII	CTCAG	7 cut(s)	105, 861, 1014, 1217, 1290, 1865, 2051
BseRI	GAGGAG	2 cut(s)	231, 1788
BseXI	GCAGC	4 cut(s)	886, 1141, 1597, 2026
BseYI	CCCAGC	1 cut(s)	1637
Bsh1285I	CGRYCG	1 cut(s)	2057
BshFI	GGCC	1 cut(s)	841
BsiEI	CGRYCG	1 cut(s)	2057
BsiHKAI	GWGCWC	2 cut(s)	2066, 2176
BsiHKCI	CYCGRG	2 cut(s)	811, 2139
BsiSI	CCGG	6 cut(s)	793, 884, 1519, 1546, 1737, 2219
BslFI	GGGAC	1 cut(s)	1647
BslI	CCNNNNNNNGG	7 cut(s)	236, 319, 884, 1552, 1641, 1978, 2157
BsmAI	GTCTC	7 cut(s)	243, 550, 677, 1258, 1683, 2136, 2219
BsmFI	GGGAC	1 cut(s)	1647
BsmI	GAATGC	2 cut(s)	422, 527
BsnI	GGCC	1 cut(s)	841
Bso31I	GGTCTC	2 cut(s)	550, 1683
BsoBI	CYCGRG	2 cut(s)	811, 2139
Bsp119I	TTCGAA	1 cut(s)	1367
Bsp1286I	GDGCHC	2 cut(s)	2066, 2176
Bsp13I	TCCGGA	1 cut(s)	1736
Bsp1720I	GCTNAGC	3 cut(s)	114, 797, 2060
BspACI	CCGC	7 cut(s)	808, 1238, 1257, 1697, 1755, 1886, 2057
BspANI	GGCC	1 cut(s)	841
BspCNI	CTCAG	7 cut(s)	106, 862, 1015, 1218, 1291, 1864, 2052
BspEI	TCCGGA	1 cut(s)	1736
BspHI	TCATGA	1 cut(s)	1164
BspLI	GGNNCC	9 cut(s)	311, 901, 970, 1646, 1663, 1731, 1777, 1956, 1983
BspMAI	CTGCAG	3 cut(s)	247, 1131, 1471
BspPI	GGATC	6 cut(s)	35, 963, 976, 1351, 1976, 1989
BspT104I	TTCGAA	1 cut(s)	1367
BspTNI	GGTCTC	2 cut(s)	550, 1683
BsrBI	CCGCTC	1 cut(s)	810
BsrDI	GCAATG	2 cut(s)	679, 2028
BssECI	CCNNGG	1 cut(s)	928
BssNI	GRCGYC	2 cut(s)	996, 1597
Bst2UI	CCWGG	7 cut(s)	213, 237, 904, 930, 1952, 2167, 2242
Bst4CI	ACNGT	8 cut(s)	227, 1121, 1177, 1462, 1605, 1694, 1820, 2201
Bst6I	CTCTTC	1 cut(s)	2114
BstACI	GRCGYC	2 cut(s)	996, 1597
BstAPI	GCANNNNNTGC	1 cut(s)	741
BstBAI	YACGTR	1 cut(s)	511
BstBI	TTCGAA	1 cut(s)	1367
BstC8I	GCNNGC	5 cut(s)	742, 808, 1780, 2019, 2172
BstF5I	GGATG	9 cut(s)	130, 1255, 1297, 1357, 1374, 1733, 1751, 2134, 2162
BstH2I	RGCGCY	1 cut(s)	1858
BstHHI	GCGC	1 cut(s)	1857
BstMAI	GTCTC	7 cut(s)	243, 550, 677, 1258, 1683, 2136, 2219
BstMCI	CGRYCG	1 cut(s)	2057
BstMWI	GCNNNNNNNGC	7 cut(s)	208, 741, 807, 847, 871, 1033, 1542
BstNI	CCWGG	7 cut(s)	213, 237, 904, 930, 1952, 2167, 2242
BstNSI	RCATGY	5 cut(s)	65, 744, 1503, 1513, 1882
BstSCI	CCNGG	9 cut(s)	211, 235, 883, 902, 928, 1950, 2165, 2217, 2240
BstSFI	CTRYAG	3 cut(s)	243, 1127, 1467
BstV1I	GCAGC	4 cut(s)	886, 1141, 1597, 2026
BstV2I	GAAGAC	1 cut(s)	557
BstX2I	RGATCY	5 cut(s)	661, 968, 1356, 1471, 1981
BstXI	CCANNNNNNTGG	2 cut(s)	24, 1381
BstYI	RGATCY	5 cut(s)	661, 968, 1356, 1471, 1981
BsuI	GTATCC	1 cut(s)	1177
BsuRI	GGCC	1 cut(s)	841
BtsCI	GGATG	9 cut(s)	130, 1255, 1297, 1357, 1374, 1733, 1751, 2134, 2162
BtsI	GCAGTG	1 cut(s)	642
BtsIMutI	CAGTG	5 cut(s)	623, 642, 894, 1117, 1983
Cac8I	GCNNGC	5 cut(s)	742, 808, 1780, 2019, 2172
CaiI	CAGNNNCTG	2 cut(s)	236, 1022
CciI	TCATGA	1 cut(s)	1164
CfoI	GCGC	1 cut(s)	1857
Cfr13I	GGNCC	1 cut(s)	1661
CspCI	CAANNNNNGTGG	2 cut(s)	1792, 1827
DraI	TTTAAA	2 cut(s)	690, 1408
DrdI	GACNNNNNNGTC	1 cut(s)	691
DseDI	GACNNNNNNGTC	1 cut(s)	691
Eam1104I	CTCTTC	1 cut(s)	2114
EarI	CTCTTC	1 cut(s)	2114
EciI	GGCGGA	2 cut(s)	1246, 1744
Eco31I	GGTCTC	2 cut(s)	550, 1683
Eco47I	GGWCC	1 cut(s)	1661
Eco57I	CTGAAG	3 cut(s)	999, 1296, 1404
Eco72I	CACGTG	1 cut(s)	511
Eco88I	CYCGRG	2 cut(s)	811, 2139
EcoO109I	RGGNCCY	1 cut(s)	1661
EcoRI	GAATTC	1 cut(s)	907
EcoRII	CCWGG	7 cut(s)	211, 235, 902, 928, 1950, 2165, 2240
EcoT22I	ATGCAT	1 cut(s)	204
FaqI	GGGAC	1 cut(s)	1647
FauI	CCCGC	2 cut(s)	815, 1893
FbaI	TGATCA	1 cut(s)	1939
FblI	GTMKAC	1 cut(s)	1600
Fnu4HI	GCNGC	4 cut(s)	875, 1130, 1611, 2015
FokI	GGATG	9 cut(s)	137, 1262, 1304, 1361, 1364, 1720, 1738, 2141, 2149
Fsp4HI	GCNGC	4 cut(s)	875, 1130, 1611, 2015
FspBI	CTAG	8 cut(s)	170, 578, 606, 761, 1188, 1770, 1892, 2211
GlaI	GCGC	1 cut(s)	1856
GluI	GCNGC	4 cut(s)	875, 1130, 1611, 2015
GsaI	CCCAGC	1 cut(s)	1641
GsuI	CTGGAG	3 cut(s)	234, 1246, 1707
HaeII	RGCGCY	1 cut(s)	1858
HaeIII	GGCC	1 cut(s)	841
HapII	CCGG	6 cut(s)	793, 884, 1519, 1546, 1737, 2219
HhaI	GCGC	1 cut(s)	1857
Hin1I	GRCGYC	2 cut(s)	996, 1597
Hin6I	GCGC	1 cut(s)	1855
HinP1I	GCGC	1 cut(s)	1855
HincII	GTYRAC	2 cut(s)	772, 1601
HindII	GTYRAC	2 cut(s)	772, 1601
HindIII	AAGCTT	2 cut(s)	1231, 1437
HinfI	GANTC	7 cut(s)	83, 158, 983, 1271, 1304, 1846, 2078
HpaII	CCGG	6 cut(s)	793, 884, 1519, 1546, 1737, 2219
HphI	GGTGA	8 cut(s)	334, 365, 973, 1228, 1406, 1624, 1808, 2197
Hpy166II	GTNNAC	6 cut(s)	223, 772, 1068, 1173, 1343, 1601
Hpy188III	TCNNGA	9 cut(s)	547, 948, 1000, 1031, 1165, 1263, 1686, 1737, 1892
Hpy8I	GTNNAC	6 cut(s)	223, 772, 1068, 1173, 1343, 1601
Hpy99I	CGWCG	3 cut(s)	1289, 1602, 1812
HpyAV	CCTTC	5 cut(s)	184, 557, 945, 958, 1793
HpyCH4III	ACNGT	8 cut(s)	227, 1121, 1177, 1462, 1605, 1694, 1820, 2201
HpyCH4IV	ACGT	6 cut(s)	99, 510, 996, 1114, 1362, 1597
HpyF10VI	GCNNNNNNNGC	7 cut(s)	208, 741, 807, 847, 871, 1033, 1542
HpySE526I	ACGT	6 cut(s)	99, 510, 996, 1114, 1362, 1597
Hsp92I	GRCGYC	2 cut(s)	996, 1597
HspAI	GCGC	1 cut(s)	1855
Kpn2I	TCCGGA	1 cut(s)	1736
Ksp22I	TGATCA	1 cut(s)	1939
LmnI	GCTCC	5 cut(s)	712, 749, 1046, 1644, 1775
Lsp1109I	GCAGC	4 cut(s)	886, 1141, 1597, 2026
LweI	GCATC	3 cut(s)	211, 1282, 1885
MaeI	CTAG	8 cut(s)	170, 578, 606, 761, 1188, 1770, 1892, 2211
MaeII	ACGT	6 cut(s)	99, 510, 996, 1114, 1362, 1597
MaeIII	GTNAC	8 cut(s)	92, 260, 992, 1115, 1394, 1462, 1668, 2258
MbiI	CCGCTC	1 cut(s)	810
MboII	GAAGA	8 cut(s)	275, 281, 337, 530, 562, 593, 1289, 2131
MfeI	CAATTG	1 cut(s)	253
MflI	RGATCY	5 cut(s)	661, 968, 1356, 1471, 1981
MhlI	GDGCHC	2 cut(s)	2066, 2176
MlyI	GAGTC	1 cut(s)	167
MmeI	TCCRAC	2 cut(s)	46, 316
Mph1103I	ATGCAT	1 cut(s)	204
MroI	TCCGGA	1 cut(s)	1736
MroXI	GAANNNNTTC	3 cut(s)	383, 1208, 1270
MseI	TTAA	6 cut(s)	129, 599, 689, 936, 1407, 2156
MspA1I	CMGCKG	1 cut(s)	2059
MspI	CCGG	6 cut(s)	793, 884, 1519, 1546, 1737, 2219
MspR9I	CCNGG	9 cut(s)	213, 237, 885, 904, 930, 1952, 2167, 2219, 2242
MunI	CAATTG	1 cut(s)	253
Mva1269I	GAATGC	2 cut(s)	422, 527
MvaI	CCWGG	7 cut(s)	213, 237, 904, 930, 1952, 2167, 2242
MwoI	GCNNNNNNNGC	7 cut(s)	208, 741, 807, 847, 871, 1033, 1542
NciI	CCSGG	2 cut(s)	885, 2219
NlaIV	GGNNCC	9 cut(s)	311, 901, 970, 1646, 1663, 1731, 1777, 1956, 1983
NmuCI	GTSAC	6 cut(s)	92, 260, 992, 1115, 1394, 1462
NsiI	ATGCAT	1 cut(s)	204
NspI	RCATGY	5 cut(s)	65, 744, 1503, 1513, 1882
NspV	TTCGAA	1 cut(s)	1367
PaeI	GCATGC	1 cut(s)	744
PaeR7I	CTCGAG	1 cut(s)	811
PagI	TCATGA	1 cut(s)	1164
PciI	ACATGT	1 cut(s)	61
PctI	GAATGC	2 cut(s)	422, 527
PdmI	GAANNNNTTC	3 cut(s)	383, 1208, 1270
PfeI	GAWTC	6 cut(s)	83, 983, 1271, 1304, 1846, 2078
PflFI	GACNNNGTC	1 cut(s)	2291
PflMI	CCANNNNNTGG	2 cut(s)	236, 1978
PfoI	TCCNGGA	2 cut(s)	902, 2217
PkrI	GCNGC	4 cut(s)	876, 1131, 1612, 2016
PleI	GAGTC	1 cut(s)	166
PmaCI	CACGTG	1 cut(s)	511
PmlI	CACGTG	1 cut(s)	511
PpsI	GAGTC	1 cut(s)	166
Ppu21I	YACGTR	1 cut(s)	511
PpuMI	RGGWCCY	1 cut(s)	1661
PscI	ACATGT	1 cut(s)	61
Psp5II	RGGWCCY	1 cut(s)	1661
Psp6I	CCWGG	7 cut(s)	211, 235, 902, 928, 1950, 2165, 2240
PspCI	CACGTG	1 cut(s)	511
PspFI	CCCAGC	1 cut(s)	1637
PspGI	CCWGG	7 cut(s)	211, 235, 902, 928, 1950, 2165, 2240
PspN4I	GGNNCC	9 cut(s)	311, 901, 970, 1646, 1663, 1731, 1777, 1956, 1983
PspPI	GGNCC	1 cut(s)	1661
PspPPI	RGGWCCY	1 cut(s)	1661
PspXI	VCTCGAGB	1 cut(s)	811
PstI	CTGCAG	3 cut(s)	247, 1131, 1471
PstNI	CAGNNNCTG	2 cut(s)	236, 1022
PsuI	RGATCY	5 cut(s)	661, 968, 1356, 1471, 1981
PsyI	GACNNNGTC	1 cut(s)	2291
SalI	GTCGAC	1 cut(s)	1599
SaqAI	TTAA	6 cut(s)	129, 599, 689, 936, 1407, 2156
SatI	GCNGC	4 cut(s)	875, 1130, 1611, 2015
Sau96I	GGNCC	1 cut(s)	1661
ScaI	AGTACT	1 cut(s)	1762
SchI	GAGTC	1 cut(s)	167
ScrFI	CCNGG	9 cut(s)	213, 237, 885, 904, 930, 1952, 2167, 2219, 2242
SduI	GDGCHC	2 cut(s)	2066, 2176
SfaNI	GCATC	3 cut(s)	211, 1282, 1885
SfcI	CTRYAG	3 cut(s)	243, 1127, 1467
Sfr274I	CTCGAG	1 cut(s)	811
SfuI	TTCGAA	1 cut(s)	1367
SinI	GGWCC	1 cut(s)	1661
SlaI	CTCGAG	1 cut(s)	811
SmlI	CTYRAG	5 cut(s)	539, 811, 946, 1031, 1722
SmoI	CTYRAG	5 cut(s)	539, 811, 946, 1031, 1722
SpeI	ACTAGT	2 cut(s)	1187, 2210
SphI	GCATGC	1 cut(s)	744
SsiI	CCGC	7 cut(s)	808, 1238, 1257, 1697, 1755, 1886, 2057
SspI	AATATT	3 cut(s)	1209, 1403, 1836
SspMI	CTAG	8 cut(s)	170, 578, 606, 761, 1188, 1770, 1892, 2211
StyD4I	CCNGG	9 cut(s)	211, 235, 883, 902, 928, 1950, 2165, 2217, 2240
TaaI	ACNGT	8 cut(s)	227, 1121, 1177, 1462, 1605, 1694, 1820, 2201
TaiI	ACGT	6 cut(s)	102, 513, 999, 1117, 1365, 1600
TaqI	TCGA	5 cut(s)	548, 812, 1367, 1454, 1600
TatI	WGTACW	3 cut(s)	222, 1154, 1760
TfiI	GAWTC	6 cut(s)	83, 983, 1271, 1304, 1846, 2078
Tru1I	TTAA	6 cut(s)	129, 599, 689, 936, 1407, 2156
Tru9I	TTAA	6 cut(s)	129, 599, 689, 936, 1407, 2156
TscAI	CASTG	5 cut(s)	630, 642, 901, 1124, 1983
TseFI	GTSAC	6 cut(s)	92, 260, 992, 1115, 1394, 1462
TseI	GCWGC	4 cut(s)	874, 1129, 1610, 2014
Tsp45I	GTSAC	6 cut(s)	92, 260, 992, 1115, 1394, 1462
TspGWI	ACGGA	1 cut(s)	1367
TspRI	CASTG	5 cut(s)	630, 642, 901, 1124, 1983
Tth111I	GACNNNGTC	1 cut(s)	2291
Van91I	CCANNNNNTGG	2 cut(s)	236, 1978
VpaK11BI	GGWCC	1 cut(s)	1661
XapI	RAATTY	5 cut(s)	380, 459, 907, 1700, 2132
XbaI	TCTAGA	1 cut(s)	1891
XceI	RCATGY	5 cut(s)	65, 744, 1503, 1513, 1882
XcmI	CCANNNNNNNNNTGG	1 cut(s)	910
XhoI	CTCGAG	1 cut(s)	811
XmiI	GTMKAC	1 cut(s)	1600
XmnI	GAANNNNTTC	3 cut(s)	383, 1208, 1270
XspI	CTAG	8 cut(s)	170, 578, 606, 761, 1188, 1770, 1892, 2211
ZraI	GACGTC	2 cut(s)	997, 1598
ZrmI	AGTACT	1 cut(s)	1762
Zsp2I	ATGCAT	1 cut(s)	204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.