Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0006481

Physical Location & Seq

Genomic Coordinates Forward (+)

54031499 .. 54036999

Gene Structure 5501 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG235500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2595 bp

ATGGATTCAGTTGAAGGAAATAACCATGTCGATTATACTGAGGATGAATCTGCTGAGCATTCTTTTTCTCCAGAAGCCGTGGAGTTAAATGGTGTGGATGGCGAGCCTGAGATACTTCCTAGAGTTGGAGAAGAGTACCAGGTTGAACTTCCCCCTCTAATGGCTGTATCTGATTATCTCTGCCGTCTAGAGAACCAAACTGATGCAGAAAGCACAGATAGTAGTTCATACAGATTTCTGTTGGGATTGCCACTACCAGTAATGTGGATCAATGAGCAAGTTGAGTGTAAAAAACATGAATCCGATGTGGGTTTTAATGATGCAGTTGACGTGGCCCATAAAAATGAGTCTCTAAGATCTGAATATGTCAGTGGGTTGGTTGTTTCAGAAATGGACAGCTTTAAATGCAAAGCTGAGCCCATGGATGTTGAGTCAGATCAGGGAATAATTTTGAATGAGTCTGCGAAGTTGGATGTGAAACAGGAAATGATAATGCCTGAAAATCAAAATGGATGTCCGGTTCCTGGTACCTCGAGTGTTAGTTGGAGTCACATAGAAGAAGCCAGTTTTCTTCTTGGTTTATATATCTTTGGGAAGGACCTTGTTCTGGTGACAAAATTCGTTGGTAGTAAACAGATGGGAGATATATTATCATTCTACTATGGGATCTTTTACAAGTCTAAAAGCTACAGCAGGTGGTCAGAATGCAAGAAAATGAGAAGCAGAAAATGTATATTTGGACAAAGAATATTTACAGGATTAAGGCAACATGAGTTGTTATCTCGTTTGCGTCCTCATGTGTCAGAAGAGTGCCAAAATACTTTACTTGAGGTCTCAAAGACATTTGGGGAAGGAAAGATATTACTAGAAGAATATGTATTCATTCTAAAATCTAGAGTTGGATTGGATGCTCTTGTGGAGGCAGTGGGAATTGGTAAAGGGAAGCAAGATCTCACAGGCATTGCCATGGAGACCCCAAAGTCCAATCAGGCTGTTACTGGTCGCCCAGAAATACCAGTTGGCAAAGCATGCTCTGCACTCTCACCATTGGAAATAGTTGGCTTTCTGACAGGTAACTTCCGGCTCAGTAAAGCCCGTTCAAACGATCTCTTCTGGGAAGCTGTTTGGCCACGTTTGCTTGCTAGAGGGTGGCACTCTGAGCAGCCTAATCAGGGTCGCTTTGCTAATGCTTCCAAGCATTCATTGGTCTTTCTTCTTCCTGGGATTAAGAAGTTCTCCAGAAGGAAACTGGTGAAGGGAAGTCACTATTTTGACTCGGTAAGTGATGTGCTCAGCAAAGTTGCTTCTGACCCAGAGCTCCTCGAGTTTGAGACAGGAGCAGATAAAGTTTCCACGAGCAAGGATGAAAATGGTTGGGCTCATGAAACAAAGCCTGATGGTTTCCCAAGCCAGCAACGGTACTGTTATTTGAAACCTCGTACCCCCAGTCGTGGTACAGATACCATGAAGTTCACTGTTGTGGATACTAGTCTGGCCTATGGTAAAACATGCAAGGTGAGGGAACTCAGAAGCTTACCAGTCGAGTTGAAAACCTCCGTCTCCACCTCGAGTACTGATTCTGAAGATGAGGATGAAGTTGCTTCAGATGAATCAACACAGATATCTAACTCTGCAGATACCTTGTGTTCCCGTAGGAATGAGGTCAATGTTTCGAAGACTGTAAAGACCAGTTTGGGTAGAAATGAATCCAAAGATGACAAGTATTTGAAGTGTGATGCTTCAGAGTGGAAGCATAGAGCTTTTAGTCCACATGTGACCAATGTGGCTGCGAAGATCCCCAAGGAGCAGAACATTGATATATGCAATTACATGATGCCTAGAAGAGCAATGAAGTTCCAAAGGAGCCAGAAAGTGGTGCCTGAAAATAAAAATGGTACGGTTCCTGTTTCAAAAAAACGTCAGCGATTAGCTACTTGTAGTAGCAAAAAGACCAGCAGGATCAGCAACCACATCTCACAAGATCCCATGTTACAACAAGAGGCCTGCAGCTTTGGCCACATCTCTGAAGTCAGCGAGAAAAACCTCTCTGCAGTGGATCCATCTCCTGAGAGGTTATCATCCACCAGTACATCTAGAGGAGGCAGCCCAGTGATTAGTAGTGAAGCTGTTCTTGGTAGCAACAATATGGGTGCGGGACAACATTATCATTGGCCTCAATTCGATTTGAACAAGGAACCCGTTTCTCTAGATGCTGAAACTGATGAACCTATGATAGAAAGACAACATGATGGAACAACGCAGGAACCAGAAGACCATTCAATGGAAACCTCTGACGGTATGGCTGCTTCTGAGCAGCAGCCTACAGTTAACCCTCGGAGACAGAGCACAAGAAATCGTCCACTGACCGCTAAGGTACTGGAAGCTTTTGCTTGTGGATTTTTAGACACAAAGCAATCGCGGAAGAGTAGGGATGTATTTCCTCGGGAAAAATCCAAATCCAGACGTGCTCGAGCAAGGAACTTGCGTTTTGATACTAGTGTCGTGGATTATGATTTGCAGGAAACCAGTACTGCTGTCCATAGTAGTAATGCTGACGGATACAGTGAGCTTGACATGGTTTCCCAAATGGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

864

Amino Acids

96.48

Weight (kDa)

5.85

Isoelectric Point (pI)

52.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7952	PF25826	182 - 312	5.3e-63	Domain of unknown function (DUF7952)
DUF7650	PF24662	351 - 438	2.9e-44	Domain of unknown function (DUF7650)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47820 AT2G47820
fragaria_vesca	FvH4_4g17850 FvH4_4g17850 FvH4_4g17850
malus_domestica	MD03G1283800.v1.1 MD13G1170000.v1.1 MD16G1171500.v1.1
prunus_persica	Prupe.1G138300_v2.0.a1 Prupe.1G138300_v2.0.a1 Prupe.1G138300_v2.0.a1 Prupe.8G255900_v2.0.a1
pyrus_communis	pycom13g14550 pycom16g14380
rosa_chinensis	RchiOBHm_Chr4g0421961
rosa_laevigata	RLG00000007650
rosa_multiflora	Rmu_co7962282.1_g000001 Rmu_sc0020808.1_g000003 Rmu_sc0021995.1_g000001
rosa_roxburghii	Rroxscaffold_5G00364050
rosa_rugosa	Rorug04G0176500
rosa_samantha	Rh4AG235500 Rh4BG238800 Rh4CG250200 Rh4DG234300
rosa_wichuraiana	Rw4G019920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	684
AasI	GACNNNNNNGTC	1 cut(s)	979
Acc36I	ACCTGC	1 cut(s)	684
Acc65I	GGTACC	1 cut(s)	527
AccB1I	GGYRCC	2 cut(s)	527, 1876
AccB7I	CCANNNNNTGG	2 cut(s)	1873, 2281
AccII	CGCG	1 cut(s)	2419
AciI	CCGC	3 cut(s)	2153, 2367, 2419
AclWI	GGATC	7 cut(s)	275, 674, 1789, 1967, 1976, 2051, 2064
AcoI	YGGCCR	2 cut(s)	1127, 2014
AcsI	RAATTY	1 cut(s)	617
AcuI	CTGAAG	4 cut(s)	1587, 1602, 1725, 2046
AfiI	CCNNNNNNNGG	8 cut(s)	125, 160, 524, 607, 1172, 1451, 1873, 2281
AflIII	ACRYGT	1 cut(s)	1771
AhlI	ACTAGT	2 cut(s)	1487, 2495
AjiI	CACGTC	2 cut(s)	331, 2465
AjnI	CCWGG	3 cut(s)	138, 523, 1219
AjuI	GAANNNNNNNTTGG	4 cut(s)	1002, 1034, 2115, 2147
AleI	CACNNNNGTG	1 cut(s)	1478
AloI	GAACNNNNNNTCC	2 cut(s)	504, 536
Alw21I	GWGCWC	4 cut(s)	1293, 1320, 2348, 2470
Alw26I	GTCTC	6 cut(s)	354, 838, 965, 1325, 1564, 2332
AlwI	GGATC	7 cut(s)	275, 674, 1789, 1967, 1976, 2051, 2064
Ama87I	CYCGRG	5 cut(s)	532, 1322, 1567, 2442, 2469
AoxI	GGCC	6 cut(s)	333, 1127, 1494, 2001, 2014, 2171
ApeKI	GCWGC	7 cut(s)	1162, 1787, 2007, 2103, 2303, 2314, 2317
ApoI	RAATTY	1 cut(s)	617
ArsI	GACNNNNNNTTYG	2 cut(s)	499, 531
Asp700I	GAANNNNTTC	1 cut(s)	2127
Asp718I	GGTACC	1 cut(s)	527
AspS9I	GGNCC	2 cut(s)	334, 598
AsuHPI	GGTGA	4 cut(s)	622, 1035, 1264, 1528
AsuII	TTCGAA	1 cut(s)	1673
AvaI	CYCGRG	5 cut(s)	532, 1322, 1567, 2442, 2469
AvaII	GGWCC	1 cut(s)	598
BaeI	ACNNNNGTAYC	2 cut(s)	2484, 2517
BalI	TGGCCA	2 cut(s)	1129, 2016
BamHI	GGATCC	1 cut(s)	2056
BanI	GGYRCC	2 cut(s)	527, 1876
BanII	GRGCYC	3 cut(s)	420, 1320, 1381
BarI	GAAGNNNNNNTAC	2 cut(s)	2290, 2322
BauI	CACGAG	1 cut(s)	1354
BbsI	GAAGAC	2 cut(s)	1682, 2277
Bbv12I	GWGCWC	4 cut(s)	1293, 1320, 2348, 2470
BbvI	GCAGC	7 cut(s)	1174, 1774, 2019, 2115, 2290, 2326, 2329
BccI	CCATC	5 cut(s)	92, 631, 1391, 2068, 2243
BceAI	ACGGC	2 cut(s)	62, 168
BciT130I	CCWGG	3 cut(s)	140, 525, 1221
BciVI	GTATCC	2 cut(s)	1477, 2552
BcoDI	GTCTC	6 cut(s)	354, 838, 965, 1325, 1564, 2332
BcuI	ACTAGT	2 cut(s)	1487, 2495
BfmI	CTRYAG	5 cut(s)	688, 1632, 2005, 2049, 2322
BfuAI	ACCTGC	1 cut(s)	684
BfuI	GTATCC	2 cut(s)	1477, 2552
BglII	AGATCT	2 cut(s)	356, 949
BisI	GCNGC	7 cut(s)	1163, 1788, 2008, 2104, 2304, 2315, 2318
BlpI	GCTNAGC	3 cut(s)	54, 414, 1292
BlsI	GCNGC	7 cut(s)	1164, 1789, 2009, 2105, 2305, 2316, 2319
BmcAI	AGTACT	2 cut(s)	1573, 2530
Bme1390I	CCNGG	3 cut(s)	140, 525, 1221
Bme18I	GGWCC	1 cut(s)	598
BmeT110I	CYCGRG	5 cut(s)	532, 1322, 1567, 2442, 2469
BmgBI	CACGTC	2 cut(s)	331, 2465
BmgT120I	GGNCC	2 cut(s)	334, 598
BmiI	GGNNCC	8 cut(s)	522, 529, 1865, 1878, 1902, 2058, 2196, 2265
BmrFI	CCNGG	3 cut(s)	140, 525, 1221
BmrI	ACTGGG	2 cut(s)	1440, 2102
BmsI	GCATC	6 cut(s)	193, 310, 898, 1726, 1824, 2200
BmuI	ACTGGG	2 cut(s)	1440, 2102
BpiI	GAAGAC	2 cut(s)	1682, 2277
BpmI	CTGGAG	2 cut(s)	54, 1222
Bpu10I	CCTNAGC	1 cut(s)	2370
Bpu1102I	GCTNAGC	3 cut(s)	54, 414, 1292
Bpu14I	TTCGAA	1 cut(s)	1673
BpuEI	CTTGAG	1 cut(s)	848
BsaI	GGTCTC	2 cut(s)	838, 965
BsaJI	CCNNGG	7 cut(s)	78, 420, 966, 1220, 1800, 2333, 2441
BsaWI	WCCGGW	1 cut(s)	517
Bsc4I	CCNNNNNNNGG	8 cut(s)	125, 160, 524, 607, 1172, 1451, 1873, 2281
Bse3DI	GCAATG	2 cut(s)	960, 1854
BseBI	CCWGG	3 cut(s)	140, 525, 1221
BseDI	CCNNGG	7 cut(s)	78, 420, 966, 1220, 1800, 2333, 2441
BseLI	CCNNNNNNNGG	8 cut(s)	125, 160, 524, 607, 1172, 1451, 1873, 2281
BseMI	GCAATG	2 cut(s)	960, 1854
BseRI	GAGGAG	2 cut(s)	1310, 2112
BseXI	GCAGC	7 cut(s)	1174, 1774, 2019, 2115, 2290, 2326, 2329
BsgI	GTGCAG	1 cut(s)	1020
Bsh1236I	CGCG	1 cut(s)	2419
BshFI	GGCC	6 cut(s)	335, 1129, 1496, 2003, 2016, 2173
BshNI	GGYRCC	2 cut(s)	527, 1876
BsiHKAI	GWGCWC	4 cut(s)	1293, 1320, 2348, 2470
BsiHKCI	CYCGRG	5 cut(s)	532, 1322, 1567, 2442, 2469
BsiSI	CCGG	2 cut(s)	518, 1081
BslFI	GGGAC	1 cut(s)	2169
BslI	CCNNNNNNNGG	8 cut(s)	125, 160, 524, 607, 1172, 1451, 1873, 2281
BsmAI	GTCTC	6 cut(s)	354, 838, 965, 1325, 1564, 2332
BsmBI	CGTCTC	1 cut(s)	1564
BsmFI	GGGAC	1 cut(s)	2169
BsmI	GAATGC	3 cut(s)	58, 710, 1198
BsnI	GGCC	6 cut(s)	335, 1129, 1496, 2003, 2016, 2173
Bso31I	GGTCTC	2 cut(s)	838, 965
BsoBI	CYCGRG	5 cut(s)	532, 1322, 1567, 2442, 2469
Bsp119I	TTCGAA	1 cut(s)	1673
Bsp1286I	GDGCHC	6 cut(s)	420, 1293, 1320, 1381, 2348, 2470
Bsp1720I	GCTNAGC	3 cut(s)	54, 414, 1292
Bsp19I	CCATGG	2 cut(s)	420, 966
BspACI	CCGC	3 cut(s)	2153, 2367, 2419
BspANI	GGCC	6 cut(s)	335, 1129, 1496, 2003, 2016, 2173
BspFNI	CGCG	1 cut(s)	2419
BspHI	TCATGA	1 cut(s)	1381
BspLI	GGNNCC	8 cut(s)	522, 529, 1865, 1878, 1902, 2058, 2196, 2265
BspMAI	CTGCAG	3 cut(s)	1636, 2009, 2053
BspMI	ACCTGC	1 cut(s)	684
BspPI	GGATC	7 cut(s)	275, 674, 1789, 1967, 1976, 2051, 2064
BspQI	GCTCTTC	1 cut(s)	1837
BspT104I	TTCGAA	1 cut(s)	1673
BspT107I	GGYRCC	2 cut(s)	527, 1876
BspTNI	GGTCTC	2 cut(s)	838, 965
BsrDI	GCAATG	2 cut(s)	960, 1854
BssECI	CCNNGG	7 cut(s)	78, 420, 966, 1220, 1800, 2333, 2441
BssSI	CACGAG	1 cut(s)	1354
BssT1I	CCWWGG	3 cut(s)	420, 966, 1800
Bst2BI	CACGAG	1 cut(s)	1354
Bst2UI	CCWGG	3 cut(s)	140, 525, 1221
Bst4CI	ACNGT	8 cut(s)	1419, 1424, 1477, 1681, 1900, 2297, 2326, 2564
Bst6I	CTCTTC	5 cut(s)	126, 801, 1115, 1837, 2417
BstAPI	GCANNNNNTGC	2 cut(s)	1029, 1034
BstBI	TTCGAA	1 cut(s)	1673
BstC8I	GCNNGC	5 cut(s)	104, 1030, 1140, 1412, 2005
BstDSI	CCRYGG	3 cut(s)	78, 420, 966
BstFNI	CGCG	1 cut(s)	2419
BstMAI	GTCTC	6 cut(s)	354, 838, 965, 1325, 1564, 2332
BstMWI	GCNNNNNNNGC	7 cut(s)	405, 1029, 1034, 1135, 1159, 1962, 2013
BstNI	CCWGG	3 cut(s)	140, 525, 1221
BstNSI	RCATGY	3 cut(s)	1032, 1512, 1775
BstSCI	CCNGG	3 cut(s)	138, 523, 1219
BstSFI	CTRYAG	5 cut(s)	688, 1632, 2005, 2049, 2322
BstUI	CGCG	1 cut(s)	2419
BstV1I	GCAGC	7 cut(s)	1174, 1774, 2019, 2115, 2290, 2326, 2329
BstV2I	GAAGAC	2 cut(s)	1682, 2277
BstX2I	RGATCY	6 cut(s)	356, 666, 949, 1794, 1981, 2056
BstXI	CCANNNNNNTGG	1 cut(s)	264
BstYI	RGATCY	6 cut(s)	356, 666, 949, 1794, 1981, 2056
BsuI	GTATCC	2 cut(s)	1477, 2552
BsuRI	GGCC	6 cut(s)	335, 1129, 1496, 2003, 2016, 2173
BtgI	CCRYGG	3 cut(s)	78, 420, 966
BtrI	CACGTC	2 cut(s)	331, 2465
BtsI	GCAGTG	2 cut(s)	930, 2058
BtsIMutI	CAGTG	7 cut(s)	376, 930, 1473, 2058, 2115, 2360, 2569
BveI	ACCTGC	1 cut(s)	684
Cac8I	GCNNGC	5 cut(s)	104, 1030, 1140, 1412, 2005
CciI	TCATGA	1 cut(s)	1381
Cfr13I	GGNCC	2 cut(s)	334, 598
CseI	GACGC	1 cut(s)	779
CsiI	ACCWGGT	1 cut(s)	138
DraI	TTTAAA	1 cut(s)	403
DrdI	GACNNNNNNGTC	1 cut(s)	979
DseDI	GACNNNNNNGTC	1 cut(s)	979
EaeI	YGGCCR	2 cut(s)	1127, 2014
Eam1104I	CTCTTC	5 cut(s)	126, 801, 1115, 1837, 2417
EarI	CTCTTC	5 cut(s)	126, 801, 1115, 1837, 2417
Ecl136II	GAGCTC	1 cut(s)	1318
Eco130I	CCWWGG	3 cut(s)	420, 966, 1800
Eco147I	AGGCCT	1 cut(s)	2003
Eco24I	GRGCYC	3 cut(s)	420, 1320, 1381
Eco31I	GGTCTC	2 cut(s)	838, 965
Eco32I	GATATC	1 cut(s)	1623
Eco47I	GGWCC	1 cut(s)	598
Eco53kI	GAGCTC	1 cut(s)	1318
Eco57I	CTGAAG	4 cut(s)	1587, 1602, 1725, 2046
Eco88I	CYCGRG	5 cut(s)	532, 1322, 1567, 2442, 2469
EcoICRI	GAGCTC	1 cut(s)	1318
EcoO109I	RGGNCCY	1 cut(s)	598
EcoRII	CCWGG	3 cut(s)	138, 523, 1219
EcoRV	GATATC	1 cut(s)	1623
EcoT14I	CCWWGG	3 cut(s)	420, 966, 1800
EcoT38I	GRGCYC	3 cut(s)	420, 1320, 1381
ErhI	CCWWGG	3 cut(s)	420, 966, 1800
Esp3I	CGTCTC	1 cut(s)	1564
FalI	AAGNNNNNCTT	2 cut(s)	2115, 2147
FaqI	GGGAC	1 cut(s)	2169
FauI	CCCGC	1 cut(s)	2146
Fnu4HI	GCNGC	7 cut(s)	1163, 1788, 2008, 2104, 2304, 2315, 2318
FriOI	GRGCYC	3 cut(s)	420, 1320, 1381
Fsp4HI	GCNGC	7 cut(s)	1163, 1788, 2008, 2104, 2304, 2315, 2318
GluI	GCNGC	7 cut(s)	1163, 1788, 2008, 2104, 2304, 2315, 2318
GsuI	CTGGAG	2 cut(s)	54, 1222
HaeIII	GGCC	6 cut(s)	335, 1129, 1496, 2003, 2016, 2173
HapII	CCGG	2 cut(s)	518, 1081
HgaI	GACGC	1 cut(s)	779
HincII	GTYRAC	2 cut(s)	328, 2329
HindII	GTYRAC	2 cut(s)	328, 2329
HindIII	AAGCTT	2 cut(s)	1531, 2382
HpaI	GTTAAC	1 cut(s)	2329
HpaII	CCGG	2 cut(s)	518, 1081
HphI	GGTGA	4 cut(s)	622, 1035, 1264, 1528
Hpy166II	GTNNAC	6 cut(s)	328, 632, 1473, 1769, 2329, 2360
Hpy8I	GTNNAC	6 cut(s)	328, 632, 1473, 1769, 2329, 2360
HpyAV	CCTTC	5 cut(s)	8, 589, 845, 1236, 1249
HpyCH4III	ACNGT	8 cut(s)	1419, 1424, 1477, 1681, 1900, 2297, 2326, 2564
HpyCH4IV	ACGT	4 cut(s)	330, 1132, 1918, 2464
HpyF10VI	GCNNNNNNNGC	7 cut(s)	405, 1029, 1034, 1135, 1159, 1962, 2013
HpySE526I	ACGT	4 cut(s)	330, 1132, 1918, 2464
KpnI	GGTACC	1 cut(s)	531
KspAI	GTTAAC	1 cut(s)	2329
LguI	GCTCTTC	1 cut(s)	1837
LmnI	GCTCC	4 cut(s)	1323, 1337, 1804, 1863
Lsp1109I	GCAGC	7 cut(s)	1174, 1774, 2019, 2115, 2290, 2326, 2329
LweI	GCATC	6 cut(s)	193, 310, 898, 1726, 1824, 2200
MabI	ACCWGGT	1 cut(s)	138
MaeII	ACGT	4 cut(s)	330, 1132, 1918, 2464
MaeIII	GTNAC	7 cut(s)	548, 610, 994, 1073, 1262, 1774, 1989
MflI	RGATCY	6 cut(s)	356, 666, 949, 1794, 1981, 2056
MhlI	GDGCHC	6 cut(s)	420, 1293, 1320, 1381, 2348, 2470
MlsI	TGGCCA	2 cut(s)	1129, 2016
MluCI	AATT	5 cut(s)	447, 617, 930, 1825, 2177
MluNI	TGGCCA	2 cut(s)	1129, 2016
MlyI	GAGTC	5 cut(s)	356, 440, 467, 556, 1268
MmeI	TCCRAC	4 cut(s)	106, 450, 524, 880
Mox20I	TGGCCA	2 cut(s)	1129, 2016
MroXI	GAANNNNTTC	1 cut(s)	2127
MscI	TGGCCA	2 cut(s)	1129, 2016
MseI	TTAA	6 cut(s)	86, 315, 402, 761, 1227, 2328
MslI	CAYNNNNRTG	3 cut(s)	342, 965, 1478
Msp20I	TGGCCA	2 cut(s)	1129, 2016
MspI	CCGG	2 cut(s)	518, 1081
MspR9I	CCNGG	3 cut(s)	140, 525, 1221
Mva1269I	GAATGC	3 cut(s)	58, 710, 1198
MvaI	CCWGG	3 cut(s)	140, 525, 1221
MvnI	CGCG	1 cut(s)	2419
MwoI	GCNNNNNNNGC	7 cut(s)	405, 1029, 1034, 1135, 1159, 1962, 2013
NcoI	CCATGG	2 cut(s)	420, 966
NlaIV	GGNNCC	8 cut(s)	522, 529, 1865, 1878, 1902, 2058, 2196, 2265
NmuCI	GTSAC	4 cut(s)	548, 610, 1262, 1774
NspI	RCATGY	3 cut(s)	1032, 1512, 1775
NspV	TTCGAA	1 cut(s)	1673
OliI	CACNNNNGTG	1 cut(s)	1478
PaeI	GCATGC	1 cut(s)	1032
PaeR7I	CTCGAG	4 cut(s)	532, 1322, 1567, 2469
PagI	TCATGA	1 cut(s)	1381
PaqCI	CACCTGC	1 cut(s)	684
PceI	AGGCCT	1 cut(s)	2003
PciI	ACATGT	1 cut(s)	1771
PciSI	GCTCTTC	1 cut(s)	1837
PctI	GAATGC	3 cut(s)	58, 710, 1198
PdmI	GAANNNNTTC	1 cut(s)	2127
PfeI	GAWTC	6 cut(s)	5, 47, 299, 1577, 1610, 1706
PflMI	CCANNNNNTGG	2 cut(s)	1873, 2281
PkrI	GCNGC	7 cut(s)	1164, 1789, 2009, 2105, 2305, 2316, 2319
PleI	GAGTC	5 cut(s)	355, 439, 466, 555, 1268
PpsI	GAGTC	5 cut(s)	355, 439, 466, 555, 1268
PpuMI	RGGWCCY	1 cut(s)	598
PscI	ACATGT	1 cut(s)	1771
Psp124BI	GAGCTC	1 cut(s)	1320
Psp5II	RGGWCCY	1 cut(s)	598
Psp6I	CCWGG	3 cut(s)	138, 523, 1219
PspGI	CCWGG	3 cut(s)	138, 523, 1219
PspN4I	GGNNCC	8 cut(s)	522, 529, 1865, 1878, 1902, 2058, 2196, 2265
PspPI	GGNCC	2 cut(s)	334, 598
PspPPI	RGGWCCY	1 cut(s)	598
PspXI	VCTCGAGB	4 cut(s)	532, 1322, 1567, 2469
PsrI	GAACNNNNNNTAC	2 cut(s)	1081, 1113
PstI	CTGCAG	3 cut(s)	1636, 2009, 2053
PsuI	RGATCY	6 cut(s)	356, 666, 949, 1794, 1981, 2056
RseI	CAYNNNNRTG	3 cut(s)	342, 965, 1478
SacI	GAGCTC	1 cut(s)	1320
SapI	GCTCTTC	1 cut(s)	1837
SaqAI	TTAA	6 cut(s)	86, 315, 402, 761, 1227, 2328
SatI	GCNGC	7 cut(s)	1163, 1788, 2008, 2104, 2304, 2315, 2318
Sau96I	GGNCC	2 cut(s)	334, 598
ScaI	AGTACT	2 cut(s)	1573, 2530
SchI	GAGTC	5 cut(s)	356, 440, 467, 556, 1268
ScrFI	CCNGG	3 cut(s)	140, 525, 1221
SduI	GDGCHC	6 cut(s)	420, 1293, 1320, 1381, 2348, 2470
SexAI	ACCWGGT	1 cut(s)	138
SfaNI	GCATC	6 cut(s)	193, 310, 898, 1726, 1824, 2200
SfcI	CTRYAG	5 cut(s)	688, 1632, 2005, 2049, 2322
Sfr274I	CTCGAG	4 cut(s)	532, 1322, 1567, 2469
SfuI	TTCGAA	1 cut(s)	1673
SinI	GGWCC	1 cut(s)	598
SlaI	CTCGAG	4 cut(s)	532, 1322, 1567, 2469
SmiMI	CAYNNNNRTG	3 cut(s)	342, 965, 1478
SmlI	CTYRAG	5 cut(s)	532, 827, 1322, 1567, 2469
SmoI	CTYRAG	5 cut(s)	532, 827, 1322, 1567, 2469
SpeI	ACTAGT	2 cut(s)	1487, 2495
SphI	GCATGC	1 cut(s)	1032
Sse9I	AATT	5 cut(s)	447, 617, 930, 1825, 2177
SseBI	AGGCCT	1 cut(s)	2003
SsiI	CCGC	3 cut(s)	2153, 2367, 2419
SspI	AATATT	1 cut(s)	750
SstI	GAGCTC	1 cut(s)	1320
StuI	AGGCCT	1 cut(s)	2003
StyD4I	CCNGG	3 cut(s)	138, 523, 1219
StyI	CCWWGG	3 cut(s)	420, 966, 1800
TaaI	ACNGT	8 cut(s)	1419, 1424, 1477, 1681, 1900, 2297, 2326, 2564
TaiI	ACGT	4 cut(s)	333, 1135, 1921, 2467
TaqI	TCGA	8 cut(s)	30, 533, 1323, 1542, 1568, 1673, 2181, 2470
TasI	AATT	5 cut(s)	447, 617, 930, 1825, 2177
TatI	WGTACW	3 cut(s)	1571, 2087, 2528
TfiI	GAWTC	6 cut(s)	5, 47, 299, 1577, 1610, 1706
Tru1I	TTAA	6 cut(s)	86, 315, 402, 761, 1227, 2328
Tru9I	TTAA	6 cut(s)	86, 315, 402, 761, 1227, 2328
TscAI	CASTG	7 cut(s)	376, 930, 1480, 2058, 2115, 2367, 2569
TseFI	GTSAC	4 cut(s)	548, 610, 1262, 1774
TseI	GCWGC	7 cut(s)	1162, 1787, 2007, 2103, 2303, 2314, 2317
Tsp45I	GTSAC	4 cut(s)	548, 610, 1262, 1774
TspGWI	ACGGA	2 cut(s)	1546, 2571
TspRI	CASTG	7 cut(s)	376, 930, 1480, 2058, 2115, 2367, 2569
Van91I	CCANNNNNTGG	2 cut(s)	1873, 2281
VpaK11BI	GGWCC	1 cut(s)	598
XapI	RAATTY	1 cut(s)	617
XbaI	TCTAGA	4 cut(s)	187, 893, 2093, 2206
XceI	RCATGY	3 cut(s)	1032, 1512, 1775
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1201, 1246
XhoI	CTCGAG	4 cut(s)	532, 1322, 1567, 2469
XmnI	GAANNNNTTC	1 cut(s)	2127
ZrmI	AGTACT	2 cut(s)	1573, 2530

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.