BEST Arabidopsis thaliana protein match is
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G47820 AT2G47820 |
| fragaria_vesca | FvH4_4g17850 FvH4_4g17850 FvH4_4g17850 |
| malus_domestica | MD03G1283800.v1.1 MD13G1170000.v1.1 MD16G1171500.v1.1 |
| prunus_persica | Prupe.1G138300_v2.0.a1 Prupe.1G138300_v2.0.a1 Prupe.1G138300_v2.0.a1 Prupe.8G255900_v2.0.a1 |
| pyrus_communis | pycom13g14550 pycom16g14380 |
| rosa_chinensis | RchiOBHm_Chr4g0421961 |
| rosa_laevigata | RLG00000007650 |
| rosa_multiflora | Rmu_co7962282.1_g000001 Rmu_sc0020808.1_g000003 Rmu_sc0021995.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00364050 |
| rosa_rugosa | Rorug04G0176500 |
| rosa_samantha | Rh4AG235500 Rh4BG238800 Rh4CG250200 Rh4DG234300 |
| rosa_wichuraiana | Rw4G019920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 684 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 979 |
| Acc36I | ACCTGC | 1 cut(s) | 684 |
| Acc65I | GGTACC | 1 cut(s) | 527 |
| AccB1I | GGYRCC | 1 cut(s) | 527 |
| AclWI | GGATC | 5 cut(s) | 275, 674, 1701, 1714, 1789 |
| AcoI | YGGCCR | 1 cut(s) | 1127 |
| AcsI | RAATTY | 1 cut(s) | 617 |
| AcuI | CTGAAG | 3 cut(s) | 1587, 1602, 1725 |
| AfaI | GTAC | 5 cut(s) | 137, 529, 1441, 1456, 1573 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 125, 160, 524, 607, 1172, 1451 |
| AflIII | ACRYGT | 1 cut(s) | 1771 |
| AgsI | TTSAA | 7 cut(s) | 14, 146, 454, 1101, 1432, 1549, 1729 |
| AhlI | ACTAGT | 1 cut(s) | 1487 |
| AjiI | CACGTC | 2 cut(s) | 331, 1288 |
| AjnI | CCWGG | 3 cut(s) | 138, 523, 1219 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1002, 1034 |
| AleI | CACNNNNGTG | 1 cut(s) | 1478 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 504, 536 |
| AluBI | AGCT | 8 cut(s) | 399, 413, 687, 992, 1121, 1318, 1533, 1760 |
| AluI | AGCT | 8 cut(s) | 399, 413, 687, 992, 1121, 1318, 1533, 1760 |
| Alw21I | GWGCWC | 2 cut(s) | 1293, 1320 |
| Alw26I | GTCTC | 5 cut(s) | 354, 838, 965, 1325, 1564 |
| AlwI | GGATC | 5 cut(s) | 275, 674, 1701, 1714, 1789 |
| Ama87I | CYCGRG | 3 cut(s) | 532, 1322, 1567 |
| AoxI | GGCC | 4 cut(s) | 333, 1127, 1377, 1494 |
| ApaI | GGGCCC | 1 cut(s) | 1381 |
| ApeKI | GCWGC | 2 cut(s) | 1162, 1787 |
| ApoI | RAATTY | 1 cut(s) | 617 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 499, 531 |
| AseI | ATTAAT | 1 cut(s) | 1814 |
| Asp718I | GGTACC | 1 cut(s) | 527 |
| AspS9I | GGNCC | 4 cut(s) | 334, 598, 1377, 1378 |
| AsuHPI | GGTGA | 5 cut(s) | 113, 622, 1035, 1264, 1528 |
| AsuII | TTCGAA | 1 cut(s) | 1673 |
| AvaI | CYCGRG | 3 cut(s) | 532, 1322, 1567 |
| AvaII | GGWCC | 1 cut(s) | 598 |
| BaeGI | GKGCMC | 1 cut(s) | 1381 |
| BalI | TGGCCA | 1 cut(s) | 1129 |
| BamHI | GGATCC | 1 cut(s) | 1706 |
| BanI | GGYRCC | 1 cut(s) | 527 |
| BanII | GRGCYC | 3 cut(s) | 420, 1320, 1381 |
| BauI | CACGAG | 1 cut(s) | 1354 |
| BbsI | GAAGAC | 2 cut(s) | 1590, 1682 |
| Bbv12I | GWGCWC | 2 cut(s) | 1293, 1320 |
| BbvI | GCAGC | 2 cut(s) | 1174, 1774 |
| BccI | CCATC | 3 cut(s) | 92, 631, 1391 |
| BceAI | ACGGC | 3 cut(s) | 62, 168, 1433 |
| BciT130I | CCWGG | 3 cut(s) | 140, 525, 1221 |
| BciVI | GTATCC | 1 cut(s) | 1477 |
| BcoDI | GTCTC | 5 cut(s) | 354, 838, 965, 1325, 1564 |
| BcuI | ACTAGT | 1 cut(s) | 1487 |
| BfaI | CTAG | 6 cut(s) | 120, 188, 866, 894, 1143, 1488 |
| BfmI | CTRYAG | 2 cut(s) | 688, 1632 |
| BfuAI | ACCTGC | 1 cut(s) | 684 |
| BfuI | GTATCC | 1 cut(s) | 1477 |
| BglII | AGATCT | 2 cut(s) | 356, 949 |
| BisI | GCNGC | 2 cut(s) | 1163, 1788 |
| BlpI | GCTNAGC | 3 cut(s) | 54, 414, 1292 |
| BlsI | GCNGC | 2 cut(s) | 1164, 1789 |
| BmcAI | AGTACT | 1 cut(s) | 1573 |
| Bme1390I | CCNGG | 3 cut(s) | 140, 525, 1221 |
| Bme18I | GGWCC | 1 cut(s) | 598 |
| BmeT110I | CYCGRG | 3 cut(s) | 532, 1322, 1567 |
| BmgBI | CACGTC | 2 cut(s) | 331, 1288 |
| BmgT120I | GGNCC | 4 cut(s) | 334, 598, 1377, 1378 |
| BmiI | GGNNCC | 4 cut(s) | 522, 529, 1379, 1708 |
| BmrFI | CCNGG | 3 cut(s) | 140, 525, 1221 |
| BmrI | ACTGGG | 1 cut(s) | 1440 |
| BmsI | GCATC | 4 cut(s) | 193, 310, 898, 1726 |
| BmuI | ACTGGG | 1 cut(s) | 1440 |
| BpiI | GAAGAC | 2 cut(s) | 1590, 1682 |
| BpmI | CTGGAG | 2 cut(s) | 54, 1222 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 54, 414, 1292 |
| Bpu14I | TTCGAA | 1 cut(s) | 1673 |
| BpuEI | CTTGAG | 1 cut(s) | 848 |
| BsaI | GGTCTC | 2 cut(s) | 838, 965 |
| BsaJI | CCNNGG | 5 cut(s) | 78, 420, 966, 1220, 1799 |
| BsaWI | WCCGGW | 1 cut(s) | 517 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 125, 160, 524, 607, 1172, 1451 |
| Bse1I | ACTGG | 8 cut(s) | 257, 564, 1003, 1016, 1254, 1446, 1538, 1689 |
| Bse3DI | GCAATG | 1 cut(s) | 960 |
| BseBI | CCWGG | 3 cut(s) | 140, 525, 1221 |
| BseDI | CCNNGG | 5 cut(s) | 78, 420, 966, 1220, 1799 |
| BseGI | GGATG | 8 cut(s) | 49, 103, 430, 478, 518, 913, 1369, 1597 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 125, 160, 524, 607, 1172, 1451 |
| BseMI | GCAATG | 1 cut(s) | 960 |
| BseMII | CTCAG | 8 cut(s) | 30, 45, 99, 405, 1099, 1149, 1306, 1517 |
| BseNI | ACTGG | 8 cut(s) | 257, 564, 1003, 1016, 1254, 1446, 1538, 1689 |
| BseRI | GAGGAG | 1 cut(s) | 1310 |
| BseSI | GKGCMC | 1 cut(s) | 1381 |
| BseXI | GCAGC | 2 cut(s) | 1174, 1774 |
| BsgI | GTGCAG | 1 cut(s) | 1020 |
| BshFI | GGCC | 4 cut(s) | 335, 1129, 1379, 1496 |
| BshNI | GGYRCC | 1 cut(s) | 527 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1293, 1320 |
| BsiHKCI | CYCGRG | 3 cut(s) | 532, 1322, 1567 |
| BsiSI | CCGG | 2 cut(s) | 518, 1081 |
| BslFI | GGGAC | 1 cut(s) | 407 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 125, 160, 524, 607, 1172, 1451 |
| BsmAI | GTCTC | 5 cut(s) | 354, 838, 965, 1325, 1564 |
| BsmFI | GGGAC | 1 cut(s) | 407 |
| BsmI | GAATGC | 3 cut(s) | 58, 710, 1198 |
| BsnI | GGCC | 4 cut(s) | 335, 1129, 1379, 1496 |
| Bso31I | GGTCTC | 2 cut(s) | 838, 965 |
| BsoBI | CYCGRG | 3 cut(s) | 532, 1322, 1567 |
| Bsp119I | TTCGAA | 1 cut(s) | 1673 |
| Bsp120I | GGGCCC | 1 cut(s) | 1377 |
| Bsp1286I | GDGCHC | 4 cut(s) | 420, 1293, 1320, 1381 |
| Bsp143I | GATC | 8 cut(s) | 267, 356, 436, 666, 949, 1105, 1706, 1794 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 54, 414, 1292 |
| Bsp19I | CCATGG | 2 cut(s) | 420, 966 |
| BspANI | GGCC | 4 cut(s) | 335, 1129, 1379, 1496 |
| BspCNI | CTCAG | 8 cut(s) | 31, 46, 100, 406, 1098, 1150, 1305, 1518 |
| BspLI | GGNNCC | 4 cut(s) | 522, 529, 1379, 1708 |
| BspMAI | CTGCAG | 1 cut(s) | 1636 |
| BspMI | ACCTGC | 1 cut(s) | 684 |
| BspPI | GGATC | 5 cut(s) | 275, 674, 1701, 1714, 1789 |
| BspT104I | TTCGAA | 1 cut(s) | 1673 |
| BspT107I | GGYRCC | 1 cut(s) | 527 |
| BspTNI | GGTCTC | 2 cut(s) | 838, 965 |
| BsrDI | GCAATG | 1 cut(s) | 960 |
| BsrI | ACTGG | 8 cut(s) | 257, 564, 1003, 1016, 1254, 1446, 1538, 1689 |
| BssECI | CCNNGG | 5 cut(s) | 78, 420, 966, 1220, 1799 |
| BssMI | GATC | 8 cut(s) | 267, 356, 436, 666, 949, 1105, 1706, 1794 |
| BssSI | CACGAG | 1 cut(s) | 1354 |
| BssT1I | CCWWGG | 3 cut(s) | 420, 966, 1799 |
| Bst2BI | CACGAG | 1 cut(s) | 1354 |
| Bst2UI | CCWGG | 3 cut(s) | 140, 525, 1221 |
| Bst4CI | ACNGT | 3 cut(s) | 1424, 1477, 1681 |
| Bst6I | CTCTTC | 3 cut(s) | 126, 801, 1115 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1029, 1034 |
| BstBI | TTCGAA | 1 cut(s) | 1673 |
| BstC8I | GCNNGC | 3 cut(s) | 1030, 1140, 1412 |
| BstDEI | CTNAG | 9 cut(s) | 39, 54, 108, 353, 414, 1085, 1158, 1292, 1526 |
| BstDSI | CCRYGG | 3 cut(s) | 78, 420, 966 |
| BstF5I | GGATG | 8 cut(s) | 49, 103, 430, 478, 518, 913, 1369, 1597 |
| BstKTI | GATC | 8 cut(s) | 270, 359, 439, 669, 952, 1108, 1709, 1797 |
| BstMAI | GTCTC | 5 cut(s) | 354, 838, 965, 1325, 1564 |
| BstMBI | GATC | 8 cut(s) | 267, 356, 436, 666, 949, 1105, 1706, 1794 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 405, 1029, 1034, 1135, 1159 |
| BstNI | CCWGG | 3 cut(s) | 140, 525, 1221 |
| BstNSI | RCATGY | 3 cut(s) | 1032, 1512, 1775 |
| BstSCI | CCNGG | 3 cut(s) | 138, 523, 1219 |
| BstSFI | CTRYAG | 2 cut(s) | 688, 1632 |
| BstSLI | GKGCMC | 1 cut(s) | 1381 |
| BstV1I | GCAGC | 2 cut(s) | 1174, 1774 |
| BstV2I | GAAGAC | 2 cut(s) | 1590, 1682 |
| BstX2I | RGATCY | 5 cut(s) | 356, 666, 949, 1706, 1794 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 264 |
| BstYI | RGATCY | 5 cut(s) | 356, 666, 949, 1706, 1794 |
| BsuI | GTATCC | 1 cut(s) | 1477 |
| BsuRI | GGCC | 4 cut(s) | 335, 1129, 1379, 1496 |
| BtgI | CCRYGG | 3 cut(s) | 78, 420, 966 |
| BtrI | CACGTC | 2 cut(s) | 331, 1288 |
| BtsCI | GGATG | 8 cut(s) | 49, 103, 430, 478, 518, 913, 1369, 1597 |
| BtsI | GCAGTG | 1 cut(s) | 930 |
| BtsIMutI | CAGTG | 4 cut(s) | 376, 930, 1420, 1473 |
| BveI | ACCTGC | 1 cut(s) | 684 |
| Cac8I | GCNNGC | 3 cut(s) | 1030, 1140, 1412 |
| Cfr13I | GGNCC | 4 cut(s) | 334, 598, 1377, 1378 |
| CseI | GACGC | 1 cut(s) | 779 |
| CsiI | ACCWGGT | 1 cut(s) | 138 |
| Csp6I | GTAC | 5 cut(s) | 136, 528, 1440, 1455, 1572 |
| CviQI | GTAC | 5 cut(s) | 136, 528, 1440, 1455, 1572 |
| DdeI | CTNAG | 9 cut(s) | 39, 54, 108, 353, 414, 1085, 1158, 1292, 1526 |
| DpnI | GATC | 8 cut(s) | 269, 358, 438, 668, 951, 1107, 1708, 1796 |
| DpnII | GATC | 8 cut(s) | 267, 356, 436, 666, 949, 1105, 1706, 1794 |
| DraI | TTTAAA | 1 cut(s) | 403 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 979 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 979 |
| EaeI | YGGCCR | 1 cut(s) | 1127 |
| Eam1104I | CTCTTC | 3 cut(s) | 126, 801, 1115 |
| EarI | CTCTTC | 3 cut(s) | 126, 801, 1115 |
| Ecl136II | GAGCTC | 1 cut(s) | 1318 |
| Eco130I | CCWWGG | 3 cut(s) | 420, 966, 1799 |
| Eco24I | GRGCYC | 3 cut(s) | 420, 1320, 1381 |
| Eco31I | GGTCTC | 2 cut(s) | 838, 965 |
| Eco32I | GATATC | 1 cut(s) | 1623 |
| Eco47I | GGWCC | 1 cut(s) | 598 |
| Eco53kI | GAGCTC | 1 cut(s) | 1318 |
| Eco57I | CTGAAG | 3 cut(s) | 1587, 1602, 1725 |
| Eco88I | CYCGRG | 3 cut(s) | 532, 1322, 1567 |
| EcoICRI | GAGCTC | 1 cut(s) | 1318 |
| EcoO109I | RGGNCCY | 1 cut(s) | 598 |
| EcoRII | CCWGG | 3 cut(s) | 138, 523, 1219 |
| EcoRV | GATATC | 1 cut(s) | 1623 |
| EcoT14I | CCWWGG | 3 cut(s) | 420, 966, 1799 |
| EcoT38I | GRGCYC | 3 cut(s) | 420, 1320, 1381 |
| ErhI | CCWWGG | 3 cut(s) | 420, 966, 1799 |
| FaqI | GGGAC | 1 cut(s) | 407 |
| Fnu4HI | GCNGC | 2 cut(s) | 1163, 1788 |
| FokI | GGATG | 8 cut(s) | 56, 110, 437, 485, 525, 920, 1376, 1604 |
| FriOI | GRGCYC | 3 cut(s) | 420, 1320, 1381 |
| Fsp4HI | GCNGC | 2 cut(s) | 1163, 1788 |
| FspBI | CTAG | 6 cut(s) | 120, 188, 866, 894, 1143, 1488 |
| GluI | GCNGC | 2 cut(s) | 1163, 1788 |
| GsuI | CTGGAG | 2 cut(s) | 54, 1222 |
| HaeIII | GGCC | 4 cut(s) | 335, 1129, 1379, 1496 |
| HapII | CCGG | 2 cut(s) | 518, 1081 |
| HgaI | GACGC | 1 cut(s) | 779 |
| HincII | GTYRAC | 1 cut(s) | 328 |
| HindII | GTYRAC | 1 cut(s) | 328 |
| HindIII | AAGCTT | 1 cut(s) | 1531 |
| HpaII | CCGG | 2 cut(s) | 518, 1081 |
| HphI | GGTGA | 5 cut(s) | 113, 622, 1035, 1264, 1528 |
| Hpy166II | GTNNAC | 4 cut(s) | 328, 632, 1473, 1769 |
| Hpy188III | TCNNGA | 4 cut(s) | 71, 188, 894, 1239 |
| Hpy8I | GTNNAC | 4 cut(s) | 328, 632, 1473, 1769 |
| HpyAV | CCTTC | 5 cut(s) | 8, 589, 845, 1236, 1249 |
| HpyCH4III | ACNGT | 3 cut(s) | 1424, 1477, 1681 |
| HpyCH4IV | ACGT | 3 cut(s) | 330, 1132, 1287 |
| HpyCH4V | TGCA | 8 cut(s) | 206, 323, 408, 708, 1037, 1512, 1634, 1823 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 405, 1029, 1034, 1135, 1159 |
| HpyF3I | CTNAG | 9 cut(s) | 39, 54, 108, 353, 414, 1085, 1158, 1292, 1526 |
| HpySE526I | ACGT | 3 cut(s) | 330, 1132, 1287 |
| KpnI | GGTACC | 1 cut(s) | 531 |
| Kzo9I | GATC | 8 cut(s) | 267, 356, 436, 666, 949, 1105, 1706, 1794 |
| LmnI | GCTCC | 3 cut(s) | 1323, 1337, 1803 |
| Lsp1109I | GCAGC | 2 cut(s) | 1174, 1774 |
| LweI | GCATC | 4 cut(s) | 193, 310, 898, 1726 |
| MabI | ACCWGGT | 1 cut(s) | 138 |
| MaeI | CTAG | 6 cut(s) | 120, 188, 866, 894, 1143, 1488 |
| MaeII | ACGT | 3 cut(s) | 330, 1132, 1287 |
| MaeIII | GTNAC | 7 cut(s) | 548, 610, 994, 1073, 1262, 1283, 1774 |
| MalI | GATC | 8 cut(s) | 269, 358, 438, 668, 951, 1107, 1708, 1796 |
| MboI | GATC | 8 cut(s) | 267, 356, 436, 666, 949, 1105, 1706, 1794 |
| MflI | RGATCY | 5 cut(s) | 356, 666, 949, 1706, 1794 |
| MhlI | GDGCHC | 4 cut(s) | 420, 1293, 1320, 1381 |
| MlsI | TGGCCA | 1 cut(s) | 1129 |
| MluCI | AATT | 4 cut(s) | 447, 617, 930, 1824 |
| MluNI | TGGCCA | 1 cut(s) | 1129 |
| MlyI | GAGTC | 6 cut(s) | 113, 356, 440, 467, 556, 1268 |
| MmeI | TCCRAC | 4 cut(s) | 106, 450, 524, 880 |
| Mox20I | TGGCCA | 1 cut(s) | 1129 |
| MscI | TGGCCA | 1 cut(s) | 1129 |
| MseI | TTAA | 6 cut(s) | 86, 315, 402, 761, 1227, 1814 |
| MslI | CAYNNNNRTG | 3 cut(s) | 342, 965, 1478 |
| Msp20I | TGGCCA | 1 cut(s) | 1129 |
| MspI | CCGG | 2 cut(s) | 518, 1081 |
| MspR9I | CCNGG | 3 cut(s) | 140, 525, 1221 |
| Mva1269I | GAATGC | 3 cut(s) | 58, 710, 1198 |
| MvaI | CCWGG | 3 cut(s) | 140, 525, 1221 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 405, 1029, 1034, 1135, 1159 |
| NcoI | CCATGG | 2 cut(s) | 420, 966 |
| NdeII | GATC | 8 cut(s) | 267, 356, 436, 666, 949, 1105, 1706, 1794 |
| NlaIV | GGNNCC | 4 cut(s) | 522, 529, 1379, 1708 |
| NmuCI | GTSAC | 5 cut(s) | 548, 610, 1262, 1283, 1774 |
| NspI | RCATGY | 3 cut(s) | 1032, 1512, 1775 |
| NspV | TTCGAA | 1 cut(s) | 1673 |
| OliI | CACNNNNGTG | 1 cut(s) | 1478 |
| PaeI | GCATGC | 1 cut(s) | 1032 |
| PaeR7I | CTCGAG | 3 cut(s) | 532, 1322, 1567 |
| PaqCI | CACCTGC | 1 cut(s) | 684 |
| PciI | ACATGT | 1 cut(s) | 1771 |
| PctI | GAATGC | 3 cut(s) | 58, 710, 1198 |
| PfeI | GAWTC | 5 cut(s) | 5, 47, 299, 1577, 1610 |
| PkrI | GCNGC | 2 cut(s) | 1164, 1789 |
| PleI | GAGTC | 6 cut(s) | 112, 355, 439, 466, 555, 1268 |
| PpsI | GAGTC | 6 cut(s) | 112, 355, 439, 466, 555, 1268 |
| PpuMI | RGGWCCY | 1 cut(s) | 598 |
| PscI | ACATGT | 1 cut(s) | 1771 |
| PshBI | ATTAAT | 1 cut(s) | 1814 |
| Psp124BI | GAGCTC | 1 cut(s) | 1320 |
| Psp5II | RGGWCCY | 1 cut(s) | 598 |
| Psp6I | CCWGG | 3 cut(s) | 138, 523, 1219 |
| PspGI | CCWGG | 3 cut(s) | 138, 523, 1219 |
| PspN4I | GGNNCC | 4 cut(s) | 522, 529, 1379, 1708 |
| PspOMI | GGGCCC | 1 cut(s) | 1377 |
| PspPI | GGNCC | 4 cut(s) | 334, 598, 1377, 1378 |
| PspPPI | RGGWCCY | 1 cut(s) | 598 |
| PspXI | VCTCGAGB | 3 cut(s) | 532, 1322, 1567 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1081, 1113 |
| PstI | CTGCAG | 1 cut(s) | 1636 |
| PsuI | RGATCY | 5 cut(s) | 356, 666, 949, 1706, 1794 |
| RsaI | GTAC | 5 cut(s) | 137, 529, 1441, 1456, 1573 |
| RsaNI | GTAC | 5 cut(s) | 136, 528, 1440, 1455, 1572 |
| RseI | CAYNNNNRTG | 3 cut(s) | 342, 965, 1478 |
| SacI | GAGCTC | 1 cut(s) | 1320 |
| SaqAI | TTAA | 6 cut(s) | 86, 315, 402, 761, 1227, 1814 |
| SatI | GCNGC | 2 cut(s) | 1163, 1788 |
| Sau3AI | GATC | 8 cut(s) | 267, 356, 436, 666, 949, 1105, 1706, 1794 |
| Sau96I | GGNCC | 4 cut(s) | 334, 598, 1377, 1378 |
| ScaI | AGTACT | 1 cut(s) | 1573 |
| SchI | GAGTC | 6 cut(s) | 113, 356, 440, 467, 556, 1268 |
| ScrFI | CCNGG | 3 cut(s) | 140, 525, 1221 |
| SduI | GDGCHC | 4 cut(s) | 420, 1293, 1320, 1381 |
| SexAI | ACCWGGT | 1 cut(s) | 138 |
| SfaNI | GCATC | 4 cut(s) | 193, 310, 898, 1726 |
| SfcI | CTRYAG | 2 cut(s) | 688, 1632 |
| Sfr274I | CTCGAG | 3 cut(s) | 532, 1322, 1567 |
| SfuI | TTCGAA | 1 cut(s) | 1673 |
| SinI | GGWCC | 1 cut(s) | 598 |
| SlaI | CTCGAG | 3 cut(s) | 532, 1322, 1567 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 342, 965, 1478 |
| SmlI | CTYRAG | 4 cut(s) | 532, 827, 1322, 1567 |
| SmoI | CTYRAG | 4 cut(s) | 532, 827, 1322, 1567 |
| SpeI | ACTAGT | 1 cut(s) | 1487 |
| SphI | GCATGC | 1 cut(s) | 1032 |
| Sse9I | AATT | 4 cut(s) | 447, 617, 930, 1824 |
| SspI | AATATT | 1 cut(s) | 750 |
| SspMI | CTAG | 6 cut(s) | 120, 188, 866, 894, 1143, 1488 |
| SstI | GAGCTC | 1 cut(s) | 1320 |
| StyD4I | CCNGG | 3 cut(s) | 138, 523, 1219 |
| StyI | CCWWGG | 3 cut(s) | 420, 966, 1799 |
| TaaI | ACNGT | 3 cut(s) | 1424, 1477, 1681 |
| TaiI | ACGT | 3 cut(s) | 333, 1135, 1290 |
| TaqI | TCGA | 6 cut(s) | 30, 533, 1323, 1542, 1568, 1673 |
| TasI | AATT | 4 cut(s) | 447, 617, 930, 1824 |
| TatI | WGTACW | 1 cut(s) | 1571 |
| TfiI | GAWTC | 5 cut(s) | 5, 47, 299, 1577, 1610 |
| Tru1I | TTAA | 6 cut(s) | 86, 315, 402, 761, 1227, 1814 |
| Tru9I | TTAA | 6 cut(s) | 86, 315, 402, 761, 1227, 1814 |
| TscAI | CASTG | 4 cut(s) | 376, 930, 1427, 1480 |
| TseFI | GTSAC | 5 cut(s) | 548, 610, 1262, 1283, 1774 |
| TseI | GCWGC | 2 cut(s) | 1162, 1787 |
| Tsp45I | GTSAC | 5 cut(s) | 548, 610, 1262, 1283, 1774 |
| TspRI | CASTG | 4 cut(s) | 376, 930, 1427, 1480 |
| VpaK11BI | GGWCC | 1 cut(s) | 598 |
| VspI | ATTAAT | 1 cut(s) | 1814 |
| XapI | RAATTY | 1 cut(s) | 617 |
| XbaI | TCTAGA | 2 cut(s) | 187, 893 |
| XceI | RCATGY | 3 cut(s) | 1032, 1512, 1775 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1201, 1246 |
| XhoI | CTCGAG | 3 cut(s) | 532, 1322, 1567 |
| XspI | CTAG | 6 cut(s) | 120, 188, 866, 894, 1143, 1488 |
| ZrmI | AGTACT | 1 cut(s) | 1573 |