Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0006481

Physical Location & Seq

Genomic Coordinates Reverse (-)

19398545 .. 19404056

Gene Structure 5512 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000007650

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2718 bp

ATGAAGCTAAGCACAGTTTCAACCTCCATTCGCTTCATCACTTCATTTCCAAGAGAGCTCTTTGAAATCAGCCTGCGTGGGCATGAAAGCTTAGCTTCTACAAAGAACCAGATGGATTCAGTTGAAGGAAATAACCATGGCGATTATACTGAGGATGAATCTGCTGAGCAATCTTTTTCTCCAGAAGCCATGGAGTTAAATGGTGTGGATGGCGAGCCTGAGATACTTCCTAGAGTTGGAGAAGAGTACCAGGTTGAACTTCCCCCTCTAATGGCTGTATCTGATTATCTCTGCCGTCTAGAGAACCAAACTGATGCAGAAAGCACAGATAGTAGTTCATACAGATTTCTGGTGGGATTGCCACTACCAGTAATGTGGATCAATGAGGAAGTTGAGTGTAAAAAACATGAATCCAATGTGGGTTTTAATGATGCAGTTGACGAGGCCCATAAAAATGAGTCTCTAAGATCTGAATATGTCAGTGGGTTGGTTGTTTCAGAAAGGGACAGCTTTAAATGCAAAGCTGAGCCCATGGATGTTGAGTCAGATCAGGGAATAATTTTGAATGAGTCTGCGAAGTTGGATGTGAAACAGGAAATGATAATGCCTGAAAATCAAAATGGATGTCCAGTTCCTGGTACCTCGAGTGTTAGTTGGAGTCACATAGAAGAAGCCAGTTTTCTTCTTGGTTTATATATCTTTGGGAAGGACCTTGTTCTGGTGACAAAATTCGTTGGTAGTAAACAGATGGGAGATATATTATCATTCTACTATGGCATCTTTTACAAGTCTAAAAGCTACAGCAGGTGGTCAGAATGCAAGAAAATGAGAAGCAGAAAATGTATATTTGGACAAAGAATATTTACAGGATTAAGGCAACATGAGTTGTTATCTCGTTTGCGTCCTCATGTGTCAGAAGAGTGCCAAAATACTTTACTTGAGGTCTCAAAGACATTTGGGGAAGGAAAGATATTACTAGAAGAATATGTATTCATTCTAAAATCTAGAGTTGGATTGGATGCTCTTGTGGAGGCAGTAGGAATTGGTAAAGGGAAGCAAGATCTCACAGGCATTGCCATGGAGACCCCAAAGTCCAATCAGGCTGTTACTGGTCGCCCAGAAATACCAGTTGGCAAAGCATGCTCTGCACTCTCACCATTGGAAATAGTTGGCTTTCTGACAGGTAACTTCCGGCTCAGTAAAGCCCGTTCAAACGATCTCTTCTGGGAAGCTGTTTGGCCACGATTGCTTGCTAGAGGGTGGCACTCTGAGCAGCCTAATCAGGGTCGCTTTGCTAATGCTTCCAAGCATTCATTGGTCTTTCTTCTTCCTGGGATTAAGAAGTTCTCCAGAAGGAAACTGGTGAAGGGAAGTCACTATTTTGACTCGGTAAGTGACGTGCTCAGCAAAGTTGCTTCTGACCCAGAGCTCCTCGAGCTTGAGACAGGAGCAGATAAAGGTTCCACGAGCAAGGATGAAAATGGTTGGGCCCATGAAACAAAGCCTGATGGTTTCCCAAGCCAGCAACGGCACTGTTATTTGAAACCTCGTACCCCCAGTCGTGGTACAGATACCATGAAGTTCACTGTTGTGGATACTAGTCTGGCCTATGGTAAAACATGCAAGGTGAGGGAACTGAGAAGCTTACCAGTCGAGTTGAATACCTCCGTCTCCACCTCGAGTACTGATTCTGAAGATGAGGATGAAGTTGCTTCTGATGAATCAACACAGATATCTAACTCTGCAGATACCTTGTGTTCCCGTAGGAATGAGGTCAATGTTTTGAAGACCGTAAAGACCAGTTTGGGTAGAAATGAATCCAAAGATGACAAGTATTTCAAGTGTGATGCTTCAGAGTGGGAACATAGAGCTTTTAGTCCACATGTGACCAATGTGGCTGCGAAGATCCCCAAGAAGCAGAACATTGATATATGCAATTACATGATGCCTAGAAGAGCAATGAAGTTCCAAAGGAGCCAGAAAGTGGTGCCTGAAAATAAAAATGGTACGGTTCCTGTTTCAAAAAAACGTCAGCGATTAGCTACTTGTAGTAGCAAAAAGACCAGCAGGATCAGCAACCACATCTCGCAAGATCCCATGTTACAACAAGAGGCCTGCAACTTTAGCCACATGTCTGAAGTCAGCGAGAAAAACCTCTCTGCAGTGGATCCATCTCCTGAGAGGTTATCATCCACCAGTACATCTAGAGGAGGCAGCCCAGTGATTAGTAGTGAAGCTGTTCTTGGTAGGAACAATATGGGTGCGGGACAACATTATCATTGGCCTCAATTCGATTTGAACGAGGAACCCGTTTCTCTAGATGCTGAAACTGATGAACCTATGATAGAAAGACAACATGATGGAACAACGCAGGAACCAGATGGTCTGCATTCAATGGAAACCTCTGACGGTATGGCTGCTTCTGAGCAGCAGCCTACAGTCAACCCTCGGAGACAGAGCACAAGAAATCGTCCACTGACCGCTAAGGTACTGGAAGCTTTTGCTTGTGGATTTTTAGACACAAAGCAACCGCGGAAGAGTAGGGATGCATTTCCTCGGGAAAAATCCAAGTCCAGACGTGCTCGAGCAAGGATGCAAGTTCCTGACAGTTTTGATACTAGTGTTGTGGATTATAATTTGCAGGAAACCAGTACTGCTGTCCATAGTAGTAATGCTGACGGATACAGTGAGCTTGACATGGTTTCCCAAATGGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

906

Amino Acids

101.09

Weight (kDa)

5.89

Isoelectric Point (pI)

50.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7952	PF25826	219 - 349	5.7e-63	Domain of unknown function (DUF7952)
DUF7650	PF24662	388 - 475	3.1e-44	Domain of unknown function (DUF7650)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006481)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47820 AT2G47820
fragaria_vesca	FvH4_4g17850 FvH4_4g17850 FvH4_4g17850
malus_domestica	MD03G1283800.v1.1 MD13G1170000.v1.1 MD16G1171500.v1.1
prunus_persica	Prupe.1G138300_v2.0.a1 Prupe.1G138300_v2.0.a1 Prupe.1G138300_v2.0.a1 Prupe.8G255900_v2.0.a1
pyrus_communis	pycom13g14550 pycom16g14380
rosa_chinensis	RchiOBHm_Chr4g0421961
rosa_laevigata	RLG00000007650
rosa_multiflora	Rmu_co7962282.1_g000001 Rmu_sc0020808.1_g000003 Rmu_sc0021995.1_g000001
rosa_roxburghii	Rroxscaffold_5G00364050
rosa_rugosa	Rorug04G0176500
rosa_samantha	Rh4AG235500 Rh4BG238800 Rh4CG250200 Rh4DG234300
rosa_wichuraiana	Rw4G019920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2634
AarI	CACCTGC	1 cut(s)	795
AasI	GACNNNNNNGTC	1 cut(s)	1090
Acc36I	ACCTGC	1 cut(s)	795
Acc65I	GGTACC	1 cut(s)	638
AccB1I	GGYRCC	2 cut(s)	638, 1987
AccB7I	CCANNNNNTGG	2 cut(s)	635, 1984
AccII	CGCG	1 cut(s)	2533
AciI	CCGC	4 cut(s)	2264, 2481, 2531, 2533
AclWI	GGATC	6 cut(s)	386, 1900, 2078, 2087, 2162, 2175
AcoI	YGGCCR	1 cut(s)	1238
AcsI	RAATTY	1 cut(s)	728
AcuI	CTGAAG	3 cut(s)	1713, 1836, 2157
AfaI	GTAC	9 cut(s)	248, 640, 1552, 1567, 1684, 2008, 2200, 2490, 2653
AfiI	CCNNNNNNNGG	7 cut(s)	236, 271, 635, 718, 1283, 1562, 1984
AflIII	ACRYGT	2 cut(s)	1882, 2130
AhlI	ACTAGT	2 cut(s)	1598, 2618
AjiI	CACGTC	2 cut(s)	1399, 2579
AjnI	CCWGG	3 cut(s)	249, 634, 1330
AjuI	GAANNNNNNNTTGG	4 cut(s)	1113, 1145, 2226, 2258
AleI	CACNNNNGTG	1 cut(s)	1589
AloI	GAACNNNNNNTCC	2 cut(s)	615, 647
Alw21I	GWGCWC	5 cut(s)	60, 1404, 1431, 2462, 2584
Alw26I	GTCTC	6 cut(s)	465, 949, 1076, 1436, 1675, 2446
AlwI	GGATC	6 cut(s)	386, 1900, 2078, 2087, 2162, 2175
AlwNI	CAGNNNCTG	1 cut(s)	635
Ama87I	CYCGRG	5 cut(s)	643, 1433, 1678, 2556, 2583
AoxI	GGCC	6 cut(s)	444, 1238, 1488, 1605, 2112, 2282
ApaI	GGGCCC	1 cut(s)	1492
ApeKI	GCWGC	6 cut(s)	1273, 1898, 2214, 2417, 2428, 2431
ApoI	RAATTY	1 cut(s)	728
ArsI	GACNNNNNNTTYG	2 cut(s)	610, 642
Asp700I	GAANNNNTTC	1 cut(s)	2238
Asp718I	GGTACC	1 cut(s)	638
AspS9I	GGNCC	4 cut(s)	445, 709, 1488, 1489
AsuHPI	GGTGA	4 cut(s)	733, 1146, 1375, 1639
AvaI	CYCGRG	5 cut(s)	643, 1433, 1678, 2556, 2583
AvaII	GGWCC	1 cut(s)	709
BaeGI	GKGCMC	1 cut(s)	1492
BaeI	ACNNNNGTAYC	2 cut(s)	2607, 2640
BalI	TGGCCA	1 cut(s)	1240
BamHI	GGATCC	1 cut(s)	2167
BanI	GGYRCC	2 cut(s)	638, 1987
BanII	GRGCYC	4 cut(s)	60, 531, 1431, 1492
BarI	GAAGNNNNNNTAC	2 cut(s)	2404, 2436
BauI	CACGAG	1 cut(s)	1465
BbsI	GAAGAC	1 cut(s)	1793
Bbv12I	GWGCWC	5 cut(s)	60, 1404, 1431, 2462, 2584
BbvI	GCAGC	6 cut(s)	1285, 1885, 2226, 2404, 2440, 2443
BccI	CCATC	7 cut(s)	106, 203, 742, 1502, 2179, 2354, 2375
BceAI	ACGGC	2 cut(s)	279, 1544
BciT130I	CCWGG	3 cut(s)	251, 636, 1332
BciVI	GTATCC	2 cut(s)	1588, 2675
BcoDI	GTCTC	6 cut(s)	465, 949, 1076, 1436, 1675, 2446
BcuI	ACTAGT	2 cut(s)	1598, 2618
BfmI	CTRYAG	4 cut(s)	799, 1743, 2160, 2436
BfuAI	ACCTGC	1 cut(s)	795
BfuI	GTATCC	2 cut(s)	1588, 2675
BglII	AGATCT	2 cut(s)	467, 1060
BisI	GCNGC	6 cut(s)	1274, 1899, 2215, 2418, 2429, 2432
BlpI	GCTNAGC	5 cut(s)	8, 91, 165, 525, 1403
BlsI	GCNGC	6 cut(s)	1275, 1900, 2216, 2419, 2430, 2433
BmcAI	AGTACT	2 cut(s)	1684, 2653
Bme1390I	CCNGG	3 cut(s)	251, 636, 1332
Bme18I	GGWCC	1 cut(s)	709
BmeT110I	CYCGRG	5 cut(s)	643, 1433, 1678, 2556, 2583
BmgBI	CACGTC	2 cut(s)	1399, 2579
BmgT120I	GGNCC	4 cut(s)	445, 709, 1488, 1489
BmiI	GGNNCC	9 cut(s)	640, 1462, 1490, 1976, 1989, 2013, 2169, 2307, 2376
BmrFI	CCNGG	3 cut(s)	251, 636, 1332
BmrI	ACTGGG	2 cut(s)	1551, 2213
BmsI	GCATC	9 cut(s)	304, 421, 786, 1009, 1837, 1935, 2311, 2536, 2583
BmuI	ACTGGG	2 cut(s)	1551, 2213
BpiI	GAAGAC	1 cut(s)	1793
BpmI	CTGGAG	2 cut(s)	165, 1333
Bpu10I	CCTNAGC	1 cut(s)	2484
Bpu1102I	GCTNAGC	5 cut(s)	8, 91, 165, 525, 1403
BpuEI	CTTGAG	2 cut(s)	959, 1460
BsaI	GGTCTC	2 cut(s)	949, 1076
BsaJI	CCNNGG	8 cut(s)	136, 189, 531, 1077, 1331, 2447, 2531, 2555
Bsc4I	CCNNNNNNNGG	7 cut(s)	236, 271, 635, 718, 1283, 1562, 1984
Bse3DI	GCAATG	2 cut(s)	1071, 1965
BseBI	CCWGG	3 cut(s)	251, 636, 1332
BseDI	CCNNGG	8 cut(s)	136, 189, 531, 1077, 1331, 2447, 2531, 2555
BseLI	CCNNNNNNNGG	7 cut(s)	236, 271, 635, 718, 1283, 1562, 1984
BseMI	GCAATG	2 cut(s)	1071, 1965
BseRI	GAGGAG	2 cut(s)	1421, 2223
BseSI	GKGCMC	1 cut(s)	1492
BseXI	GCAGC	6 cut(s)	1285, 1885, 2226, 2404, 2440, 2443
BsgI	GTGCAG	1 cut(s)	1131
Bsh1236I	CGCG	1 cut(s)	2533
BshFI	GGCC	6 cut(s)	446, 1240, 1490, 1607, 2114, 2284
BshNI	GGYRCC	2 cut(s)	638, 1987
BsiHKAI	GWGCWC	5 cut(s)	60, 1404, 1431, 2462, 2584
BsiHKCI	CYCGRG	5 cut(s)	643, 1433, 1678, 2556, 2583
BsiSI	CCGG	1 cut(s)	1192
BslFI	GGGAC	2 cut(s)	518, 2280
BslI	CCNNNNNNNGG	7 cut(s)	236, 271, 635, 718, 1283, 1562, 1984
BsmAI	GTCTC	6 cut(s)	465, 949, 1076, 1436, 1675, 2446
BsmBI	CGTCTC	1 cut(s)	1675
BsmFI	GGGAC	2 cut(s)	518, 2280
BsmI	GAATGC	3 cut(s)	821, 1309, 2389
BsnI	GGCC	6 cut(s)	446, 1240, 1490, 1607, 2114, 2284
Bso31I	GGTCTC	2 cut(s)	949, 1076
BsoBI	CYCGRG	5 cut(s)	643, 1433, 1678, 2556, 2583
Bsp120I	GGGCCC	1 cut(s)	1488
Bsp1286I	GDGCHC	7 cut(s)	60, 531, 1404, 1431, 1492, 2462, 2584
Bsp143I	GATC	9 cut(s)	378, 467, 547, 1060, 1216, 1905, 2070, 2092, 2167
Bsp1720I	GCTNAGC	5 cut(s)	8, 91, 165, 525, 1403
Bsp19I	CCATGG	4 cut(s)	136, 189, 531, 1077
BspACI	CCGC	4 cut(s)	2264, 2481, 2531, 2533
BspANI	GGCC	6 cut(s)	446, 1240, 1490, 1607, 2114, 2284
BspFNI	CGCG	1 cut(s)	2533
BspLI	GGNNCC	9 cut(s)	640, 1462, 1490, 1976, 1989, 2013, 2169, 2307, 2376
BspMAI	CTGCAG	2 cut(s)	1747, 2164
BspMI	ACCTGC	1 cut(s)	795
BspPI	GGATC	6 cut(s)	386, 1900, 2078, 2087, 2162, 2175
BspQI	GCTCTTC	1 cut(s)	1948
BspT107I	GGYRCC	2 cut(s)	638, 1987
BspTNI	GGTCTC	2 cut(s)	949, 1076
BsrDI	GCAATG	2 cut(s)	1071, 1965
BssECI	CCNNGG	8 cut(s)	136, 189, 531, 1077, 1331, 2447, 2531, 2555
BssMI	GATC	9 cut(s)	378, 467, 547, 1060, 1216, 1905, 2070, 2092, 2167
BssSI	CACGAG	1 cut(s)	1465
BssT1I	CCWWGG	4 cut(s)	136, 189, 531, 1077
Bst2BI	CACGAG	1 cut(s)	1465
Bst2UI	CCWGG	3 cut(s)	251, 636, 1332
Bst4CI	ACNGT	9 cut(s)	16, 1535, 1588, 1792, 2011, 2411, 2440, 2609, 2687
Bst6I	CTCTTC	5 cut(s)	237, 912, 1226, 1948, 2531
BstAPI	GCANNNNNTGC	2 cut(s)	1140, 1145
BstC8I	GCNNGC	6 cut(s)	74, 215, 1141, 1251, 1523, 2116
BstDSI	CCRYGG	5 cut(s)	136, 189, 531, 1077, 2531
BstFNI	CGCG	1 cut(s)	2533
BstKTI	GATC	9 cut(s)	381, 470, 550, 1063, 1219, 1908, 2073, 2095, 2170
BstMAI	GTCTC	6 cut(s)	465, 949, 1076, 1436, 1675, 2446
BstMBI	GATC	9 cut(s)	378, 467, 547, 1060, 1216, 1905, 2070, 2092, 2167
BstMWI	GCNNNNNNNGC	8 cut(s)	516, 1140, 1145, 1246, 1270, 1435, 2073, 2124
BstNI	CCWGG	3 cut(s)	251, 636, 1332
BstNSI	RCATGY	4 cut(s)	1143, 1623, 1886, 2134
BstSCI	CCNGG	3 cut(s)	249, 634, 1330
BstSFI	CTRYAG	4 cut(s)	799, 1743, 2160, 2436
BstSLI	GKGCMC	1 cut(s)	1492
BstUI	CGCG	1 cut(s)	2533
BstV1I	GCAGC	6 cut(s)	1285, 1885, 2226, 2404, 2440, 2443
BstV2I	GAAGAC	1 cut(s)	1793
BstX2I	RGATCY	5 cut(s)	467, 1060, 1905, 2092, 2167
BstXI	CCANNNNNNTGG	1 cut(s)	375
BstYI	RGATCY	5 cut(s)	467, 1060, 1905, 2092, 2167
BsuI	GTATCC	2 cut(s)	1588, 2675
BsuRI	GGCC	6 cut(s)	446, 1240, 1490, 1607, 2114, 2284
BtgI	CCRYGG	5 cut(s)	136, 189, 531, 1077, 2531
BtrI	CACGTC	2 cut(s)	1399, 2579
BtsI	GCAGTG	1 cut(s)	2169
BtsIMutI	CAGTG	7 cut(s)	487, 1531, 1584, 2169, 2226, 2474, 2692
BveI	ACCTGC	1 cut(s)	795
Cac8I	GCNNGC	6 cut(s)	74, 215, 1141, 1251, 1523, 2116
CaiI	CAGNNNCTG	1 cut(s)	635
Cfr13I	GGNCC	4 cut(s)	445, 709, 1488, 1489
Cfr42I	CCGCGG	1 cut(s)	2534
CseI	GACGC	1 cut(s)	890
CsiI	ACCWGGT	1 cut(s)	249
Csp6I	GTAC	9 cut(s)	247, 639, 1551, 1566, 1683, 2007, 2199, 2489, 2652
CviQI	GTAC	9 cut(s)	247, 639, 1551, 1566, 1683, 2007, 2199, 2489, 2652
DpnI	GATC	9 cut(s)	380, 469, 549, 1062, 1218, 1907, 2072, 2094, 2169
DpnII	GATC	9 cut(s)	378, 467, 547, 1060, 1216, 1905, 2070, 2092, 2167
DraI	TTTAAA	1 cut(s)	514
DrdI	GACNNNNNNGTC	1 cut(s)	1090
DseDI	GACNNNNNNGTC	1 cut(s)	1090
EaeI	YGGCCR	1 cut(s)	1238
Eam1104I	CTCTTC	5 cut(s)	237, 912, 1226, 1948, 2531
EarI	CTCTTC	5 cut(s)	237, 912, 1226, 1948, 2531
Ecl136II	GAGCTC	2 cut(s)	58, 1429
Eco130I	CCWWGG	4 cut(s)	136, 189, 531, 1077
Eco147I	AGGCCT	1 cut(s)	2114
Eco24I	GRGCYC	4 cut(s)	60, 531, 1431, 1492
Eco31I	GGTCTC	2 cut(s)	949, 1076
Eco32I	GATATC	1 cut(s)	1734
Eco47I	GGWCC	1 cut(s)	709
Eco53kI	GAGCTC	2 cut(s)	58, 1429
Eco57I	CTGAAG	3 cut(s)	1713, 1836, 2157
Eco88I	CYCGRG	5 cut(s)	643, 1433, 1678, 2556, 2583
EcoICRI	GAGCTC	2 cut(s)	58, 1429
EcoO109I	RGGNCCY	1 cut(s)	709
EcoRII	CCWGG	3 cut(s)	249, 634, 1330
EcoRV	GATATC	1 cut(s)	1734
EcoT14I	CCWWGG	4 cut(s)	136, 189, 531, 1077
EcoT22I	ATGCAT	1 cut(s)	2551
EcoT38I	GRGCYC	4 cut(s)	60, 531, 1431, 1492
ErhI	CCWWGG	4 cut(s)	136, 189, 531, 1077
Esp3I	CGTCTC	1 cut(s)	1675
FalI	AAGNNNNNCTT	4 cut(s)	79, 111, 2226, 2258
FaqI	GGGAC	2 cut(s)	518, 2280
FauI	CCCGC	1 cut(s)	2257
Fnu4HI	GCNGC	6 cut(s)	1274, 1899, 2215, 2418, 2429, 2432
FriOI	GRGCYC	4 cut(s)	60, 531, 1431, 1492
Fsp4HI	GCNGC	6 cut(s)	1274, 1899, 2215, 2418, 2429, 2432
GluI	GCNGC	6 cut(s)	1274, 1899, 2215, 2418, 2429, 2432
GsuI	CTGGAG	2 cut(s)	165, 1333
HaeIII	GGCC	6 cut(s)	446, 1240, 1490, 1607, 2114, 2284
HapII	CCGG	1 cut(s)	1192
HgaI	GACGC	1 cut(s)	890
HincII	GTYRAC	2 cut(s)	439, 2443
HindII	GTYRAC	2 cut(s)	439, 2443
HindIII	AAGCTT	3 cut(s)	88, 1642, 2496
HpaII	CCGG	1 cut(s)	1192
HphI	GGTGA	4 cut(s)	733, 1146, 1375, 1639
Hpy166II	GTNNAC	6 cut(s)	439, 743, 1584, 1880, 2443, 2474
Hpy8I	GTNNAC	6 cut(s)	439, 743, 1584, 1880, 2443, 2474
HpyAV	CCTTC	5 cut(s)	119, 700, 956, 1347, 1360
HpyCH4III	ACNGT	9 cut(s)	16, 1535, 1588, 1792, 2011, 2411, 2440, 2609, 2687
HpyCH4IV	ACGT	3 cut(s)	1398, 2029, 2578
HpyF10VI	GCNNNNNNNGC	8 cut(s)	516, 1140, 1145, 1246, 1270, 1435, 2073, 2124
HpySE526I	ACGT	3 cut(s)	1398, 2029, 2578
KpnI	GGTACC	1 cut(s)	642
KspI	CCGCGG	1 cut(s)	2534
Kzo9I	GATC	9 cut(s)	378, 467, 547, 1060, 1216, 1905, 2070, 2092, 2167
LguI	GCTCTTC	1 cut(s)	1948
LmnI	GCTCC	3 cut(s)	1434, 1448, 1974
Lsp1109I	GCAGC	6 cut(s)	1285, 1885, 2226, 2404, 2440, 2443
LweI	GCATC	9 cut(s)	304, 421, 786, 1009, 1837, 1935, 2311, 2536, 2583
MabI	ACCWGGT	1 cut(s)	249
MaeII	ACGT	3 cut(s)	1398, 2029, 2578
MaeIII	GTNAC	8 cut(s)	659, 721, 1105, 1184, 1373, 1394, 1885, 2100
MalI	GATC	9 cut(s)	380, 469, 549, 1062, 1218, 1907, 2072, 2094, 2169
MboI	GATC	9 cut(s)	378, 467, 547, 1060, 1216, 1905, 2070, 2092, 2167
MflI	RGATCY	5 cut(s)	467, 1060, 1905, 2092, 2167
MhlI	GDGCHC	7 cut(s)	60, 531, 1404, 1431, 1492, 2462, 2584
MlsI	TGGCCA	1 cut(s)	1240
MluCI	AATT	6 cut(s)	558, 728, 1041, 1936, 2288, 2635
MluNI	TGGCCA	1 cut(s)	1240
MlyI	GAGTC	5 cut(s)	467, 551, 578, 667, 1379
MmeI	TCCRAC	4 cut(s)	217, 561, 635, 991
Mox20I	TGGCCA	1 cut(s)	1240
Mph1103I	ATGCAT	1 cut(s)	2551
MroXI	GAANNNNTTC	1 cut(s)	2238
MscI	TGGCCA	1 cut(s)	1240
MseI	TTAA	5 cut(s)	197, 426, 513, 872, 1338
MslI	CAYNNNNRTG	3 cut(s)	453, 1076, 1589
Msp20I	TGGCCA	1 cut(s)	1240
MspA1I	CMGCKG	1 cut(s)	2533
MspI	CCGG	1 cut(s)	1192
MspR9I	CCNGG	3 cut(s)	251, 636, 1332
Mva1269I	GAATGC	3 cut(s)	821, 1309, 2389
MvaI	CCWGG	3 cut(s)	251, 636, 1332
MvnI	CGCG	1 cut(s)	2533
MwoI	GCNNNNNNNGC	8 cut(s)	516, 1140, 1145, 1246, 1270, 1435, 2073, 2124
NcoI	CCATGG	4 cut(s)	136, 189, 531, 1077
NdeII	GATC	9 cut(s)	378, 467, 547, 1060, 1216, 1905, 2070, 2092, 2167
NlaIV	GGNNCC	9 cut(s)	640, 1462, 1490, 1976, 1989, 2013, 2169, 2307, 2376
NmuCI	GTSAC	5 cut(s)	659, 721, 1373, 1394, 1885
NsiI	ATGCAT	1 cut(s)	2551
NspI	RCATGY	4 cut(s)	1143, 1623, 1886, 2134
OliI	CACNNNNGTG	1 cut(s)	1589
PaeI	GCATGC	1 cut(s)	1143
PaeR7I	CTCGAG	4 cut(s)	643, 1433, 1678, 2583
PaqCI	CACCTGC	1 cut(s)	795
PceI	AGGCCT	1 cut(s)	2114
PciI	ACATGT	2 cut(s)	1882, 2130
PciSI	GCTCTTC	1 cut(s)	1948
PcsI	WCGNNNNNNNCGW	2 cut(s)	2298, 2307
PctI	GAATGC	3 cut(s)	821, 1309, 2389
PdmI	GAANNNNTTC	1 cut(s)	2238
PfeI	GAWTC	6 cut(s)	116, 158, 410, 1688, 1721, 1817
PflMI	CCANNNNNTGG	2 cut(s)	635, 1984
PkrI	GCNGC	6 cut(s)	1275, 1900, 2216, 2419, 2430, 2433
PleI	GAGTC	5 cut(s)	466, 550, 577, 666, 1379
PpsI	GAGTC	5 cut(s)	466, 550, 577, 666, 1379
PpuMI	RGGWCCY	1 cut(s)	709
PscI	ACATGT	2 cut(s)	1882, 2130
PsiI	TTATAA	1 cut(s)	2634
Psp124BI	GAGCTC	2 cut(s)	60, 1431
Psp5II	RGGWCCY	1 cut(s)	709
Psp6I	CCWGG	3 cut(s)	249, 634, 1330
PspGI	CCWGG	3 cut(s)	249, 634, 1330
PspN4I	GGNNCC	9 cut(s)	640, 1462, 1490, 1976, 1989, 2013, 2169, 2307, 2376
PspOMI	GGGCCC	1 cut(s)	1488
PspPI	GGNCC	4 cut(s)	445, 709, 1488, 1489
PspPPI	RGGWCCY	1 cut(s)	709
PspXI	VCTCGAGB	4 cut(s)	643, 1433, 1678, 2583
PsrI	GAACNNNNNNTAC	2 cut(s)	1192, 1224
PstI	CTGCAG	2 cut(s)	1747, 2164
PstNI	CAGNNNCTG	1 cut(s)	635
PsuI	RGATCY	5 cut(s)	467, 1060, 1905, 2092, 2167
RsaI	GTAC	9 cut(s)	248, 640, 1552, 1567, 1684, 2008, 2200, 2490, 2653
RsaNI	GTAC	9 cut(s)	247, 639, 1551, 1566, 1683, 2007, 2199, 2489, 2652
RseI	CAYNNNNRTG	3 cut(s)	453, 1076, 1589
SacI	GAGCTC	2 cut(s)	60, 1431
SacII	CCGCGG	1 cut(s)	2534
SapI	GCTCTTC	1 cut(s)	1948
SaqAI	TTAA	5 cut(s)	197, 426, 513, 872, 1338
SatI	GCNGC	6 cut(s)	1274, 1899, 2215, 2418, 2429, 2432
Sau3AI	GATC	9 cut(s)	378, 467, 547, 1060, 1216, 1905, 2070, 2092, 2167
Sau96I	GGNCC	4 cut(s)	445, 709, 1488, 1489
ScaI	AGTACT	2 cut(s)	1684, 2653
SchI	GAGTC	5 cut(s)	467, 551, 578, 667, 1379
ScrFI	CCNGG	3 cut(s)	251, 636, 1332
SduI	GDGCHC	7 cut(s)	60, 531, 1404, 1431, 1492, 2462, 2584
SexAI	ACCWGGT	1 cut(s)	249
SfaNI	GCATC	9 cut(s)	304, 421, 786, 1009, 1837, 1935, 2311, 2536, 2583
SfcI	CTRYAG	4 cut(s)	799, 1743, 2160, 2436
Sfr274I	CTCGAG	4 cut(s)	643, 1433, 1678, 2583
Sfr303I	CCGCGG	1 cut(s)	2534
SgrBI	CCGCGG	1 cut(s)	2534
SinI	GGWCC	1 cut(s)	709
SlaI	CTCGAG	4 cut(s)	643, 1433, 1678, 2583
SmiMI	CAYNNNNRTG	3 cut(s)	453, 1076, 1589
SmlI	CTYRAG	6 cut(s)	643, 938, 1433, 1439, 1678, 2583
SmoI	CTYRAG	6 cut(s)	643, 938, 1433, 1439, 1678, 2583
SpeI	ACTAGT	2 cut(s)	1598, 2618
SphI	GCATGC	1 cut(s)	1143
Sse9I	AATT	6 cut(s)	558, 728, 1041, 1936, 2288, 2635
SseBI	AGGCCT	1 cut(s)	2114
SsiI	CCGC	4 cut(s)	2264, 2481, 2531, 2533
SspI	AATATT	1 cut(s)	861
SstI	GAGCTC	2 cut(s)	60, 1431
StuI	AGGCCT	1 cut(s)	2114
StyD4I	CCNGG	3 cut(s)	249, 634, 1330
StyI	CCWWGG	4 cut(s)	136, 189, 531, 1077
TaaI	ACNGT	9 cut(s)	16, 1535, 1588, 1792, 2011, 2411, 2440, 2609, 2687
TaiI	ACGT	3 cut(s)	1401, 2032, 2581
TaqI	TCGA	6 cut(s)	644, 1434, 1653, 1679, 2292, 2584
TasI	AATT	6 cut(s)	558, 728, 1041, 1936, 2288, 2635
TatI	WGTACW	3 cut(s)	1682, 2198, 2651
TfiI	GAWTC	6 cut(s)	116, 158, 410, 1688, 1721, 1817
Tru1I	TTAA	5 cut(s)	197, 426, 513, 872, 1338
Tru9I	TTAA	5 cut(s)	197, 426, 513, 872, 1338
TscAI	CASTG	7 cut(s)	487, 1538, 1591, 2169, 2226, 2481, 2692
TseFI	GTSAC	5 cut(s)	659, 721, 1373, 1394, 1885
TseI	GCWGC	6 cut(s)	1273, 1898, 2214, 2417, 2428, 2431
Tsp45I	GTSAC	5 cut(s)	659, 721, 1373, 1394, 1885
TspGWI	ACGGA	2 cut(s)	1657, 2694
TspRI	CASTG	7 cut(s)	487, 1538, 1591, 2169, 2226, 2481, 2692
Van91I	CCANNNNNTGG	2 cut(s)	635, 1984
VpaK11BI	GGWCC	1 cut(s)	709
XapI	RAATTY	1 cut(s)	728
XbaI	TCTAGA	4 cut(s)	298, 1004, 2204, 2317
XceI	RCATGY	4 cut(s)	1143, 1623, 1886, 2134
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1312, 1357
XhoI	CTCGAG	4 cut(s)	643, 1433, 1678, 2583
XmnI	GAANNNNTTC	1 cut(s)	2238
ZrmI	AGTACT	2 cut(s)	1684, 2653
Zsp2I	ATGCAT	1 cut(s)	2551

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.