Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0008749

Physical Location & Seq

Genomic Coordinates Forward (+)

17751426 .. 17758790

Gene Structure 7365 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1199900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2205 bp

ATGGGAGCCGTGCCTTCTACTCCGCGATGGGGCAGCAGCAGCAGCTCCGCCTCGCGCCCACTTGACACGGTGGAGTACCTGATTAGCACCTTCATCGGCGACGAGTCGTTTCCGTTATCTTCCGATTTCTGGAACAAACTCCTCCAACTCCCTCTCAATCTACACTGGCAGCCTGACCGCGTTCATCAAGCTTGCCAAACTCTCGCACAAAACAACTATCGTACCAGGCATCTTGCAAAGATTTTGATCCACATGGCATGGTGTTTGCAAGAATCAATTTCAACCTCTTCTGGTGCGCCTTCTATTGTTTATATGAAGGCTGTAAATGCAGTGTACATCTCATCCATCTTTCTAAAGTACTTCATTGAAAATGCAAAGGATGAGAAGATTGAAGAGTTGCATTTATCCCTTGATGAAAGTGAACCAATGCCAACTGATATTACAAAAGATTTAAACACTCAGGAATTTGTTATGCATAGTGTGCTTAGCTTTATTGGGTCAATAGATGTAAGTCCTGATACATACCTCCTTCATTTGGAGCTGCTTAACTTCATGCTGGTTGCGATGTCAACTCAACTTCTTTCTGGGCCATCTCCAGGACCGGAAGATGTGAACCCATTCATCGATGCAGCAATGTCTCAGGAAAGTTCTTTGGTTCTCTTGGTTGTCCGTAGACTGCTCCTCAGTTACATTTCAGGACCTTCCATATCCCTAAATAGTGCATCTTATTCTGTATATTCTGAAGGAAGTCAGCCTGGTGTTTTACAAAGAGTTGGATCTGCAGCTGCAAATTTCATGTTATTGCCATTCAACTTTCTTGTCAGTTCAAGTGGTGAAGGCTCAAGAAGTCTGTTGGCAGACTGCAGTCTCCACGTGCTACTTATTCTCATTCATTATCATAAATGTGTTGAGGGCATTGAACCAATTACAGATAAAAGTAATGATACAACTGCTTCAGATTCCCTTTTGAAAGGGAGTACACATTTTTCTGACAACCCTTACTGCAAGGCCTTAGAACATGCAACAGATGTTGAATTTGATCGGGCAGATACTGAGGGTAATGTACATGTTGGTCCTGTTTTGAGGTTACCTTTTGCGTCTCTGTTCGATGCTCTTGGGATGTACTTGGCTGATGAGGCTGCTGCTCTTTTGCTTTACTCTTTGTTGCAAGGGAATGCCGGCTTTCTGGAGTATGTCTTGGTGCGAACTGATTTGGATACACTGTTGATGCCTATACTGGAAGCTTTATACAATGCTTCAAAGAGGACGTCTAATCAAATCTACATGTTGCTTATTATTCTTCTCATACTTAGTCAGGATTCTTCTTTTAATGCCAGCATTCACAAATTGATACTTCCTAGTGTTCCCTGGTATAAAGAACGTCTCCTCCATCAAACATCTCTTGGTTCCTTAATGGTCATTACGCTGATACGGACAGTGCAGTATAACCTATCGAAGTTGCGGGATGTTTATCTCCATACAACTTGTCTGGCAACTTTGGCAAACATGGCACCTCATGTCCACCGTTTGAGTGCATACTCATCCCAGAGATTGGTCAGCCTTTTTGATATGCTCTCTCGAAAGTATAACAAATTAGCAGAAATGCGAGATAATCAGATGCGATTAGCCAAAGGCAACTCATTTGAAGGAACTGGCCTTGCAGATGATACATCAACGGAGATGCATATATATACCGACTTCTTGAGACTAGTTCTTGAAATATTAAATGCAATTTTGACTTATGCCCTGCCACGAAATCCTGAGGTTGTATATGCAATAATGCACAGGCAGGAGGTTTTTCAGCCTTTCAGGAATCATCCACGCTTCAGTGAGCTGCTTGAAAACATCTACACTGTGTTAGATTTTTTCAACAGTCGCATGGATGCCCAGAATACGGATGGTGAATGGTCAGTAGAGAAAGTACTCCAAGTCATAATAATTAATTGCAGATCATGGCGGGGTGAAGGGATGAAGATGTTCACTCAGTTGCGGTTCACATATGAACAAGAGAGTCATCCGGAGGAGTTCTTTATTCCATACCTGTGGCAGCTAGTTCTATCTCGCTGCACACTCGGTTTCAACCCTCGATCCATAAATTTGTTTACAGTTGATCCTCCATCCGAAAAACAGAGTGATTATGAAGTGGAATCCAGCGATCATGTTAATGGAGAGTCGGCCAAGCAAGCAGTCTTTCTTGATCCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dymeclin

Protein Analysis

735

Amino Acids

82.66

Weight (kDa)

5.27

Isoelectric Point (pI)

48.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dymeclin	PF09742	11 - 684	1.4e-195	Dyggve-Melchior-Clausen syndrome protein
Hid1	PF12722	382 - 529	2e-08	High-temperature-induced dauer-formation protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008749)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04200 AT1G04200 AT1G04200
fragaria_vesca	FvH4_4g01230 FvH4_4g01230 FvH4_4g01230
malus_domestica	MD13G1199900.v1.1 MD16G1199900.v1.1
prunus_persica	Prupe.1G021300_v2.0.a1
pyrus_communis	pycom13g17340 pycom16g16850
rosa_chinensis	RchiOBHm_Chr4g0387781
rosa_laevigata	RLG00000010096
rosa_multiflora	Rmu_sc0008916.1_g000003 Rmu_sc0013958.1_g000003
rosa_roxburghii	Rroxscaffold_5G00334400
rosa_rugosa	Rorug03G0313100 Rorug03G0313200 Rorug03G0313300
rosa_samantha	Rh4AG018300 Rh4CG019500 Rh4DG014100
rosa_wichuraiana	Rw4G001200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1271
AccB1I	GGYRCC	1 cut(s)	1510
AccB7I	CCANNNNNTGG	1 cut(s)	1552
AccI	GTMKAC	1 cut(s)	673
AccII	CGCG	3 cut(s)	25, 55, 180
AccIII	TCCGGA	1 cut(s)	2017
AciI	CCGC	6 cut(s)	23, 48, 178, 1462, 1957, 1990
AclWI	GGATC	5 cut(s)	241, 784, 2082, 2105, 2192
AcoI	YGGCCR	1 cut(s)	2175
AcsI	RAATTY	4 cut(s)	464, 790, 1034, 2095
AcuI	CTGAAG	3 cut(s)	762, 939, 1810
AcvI	CACGTG	1 cut(s)	874
AcyI	GRCGYC	1 cut(s)	1268
AfaI	GTAC	8 cut(s)	77, 223, 335, 359, 979, 1065, 1124, 1923
AfiI	CCNNNNNNNGG	6 cut(s)	29, 129, 535, 596, 1552, 1894
AflIII	ACRYGT	2 cut(s)	1066, 1284
AhlI	ACTAGT	1 cut(s)	1708
AjnI	CCWGG	4 cut(s)	224, 595, 754, 1367
AloI	GAACNNNNNNTCC	2 cut(s)	1371, 1403
AluBI	AGCT	8 cut(s)	45, 191, 489, 541, 785, 1244, 1834, 2050
AluI	AGCT	8 cut(s)	45, 191, 489, 541, 785, 1244, 1834, 2050
Alw26I	GTCTC	5 cut(s)	642, 872, 1104, 1388, 1699
AlwI	GGATC	5 cut(s)	241, 784, 2082, 2105, 2192
AlwNI	CAGNNNCTG	1 cut(s)	1052
Aor13HI	TCCGGA	1 cut(s)	2017
AoxI	GGCC	4 cut(s)	587, 1008, 1654, 2175
ApoI	RAATTY	4 cut(s)	464, 790, 1034, 2095
ArsI	GACNNNNNNTTYG	2 cut(s)	1253, 1285
AseI	ATTAAT	1 cut(s)	1941
Asp700I	GAANNNNTTC	2 cut(s)	617, 1976
AspLEI	GCGC	2 cut(s)	57, 298
AspS9I	GGNCC	4 cut(s)	587, 599, 698, 1073
AsuHPI	GGTGA	3 cut(s)	845, 1913, 1973
AvaII	GGWCC	3 cut(s)	599, 698, 1073
AxyI	CCTNAGG	1 cut(s)	1761
BaeI	ACNNNNGTAYC	2 cut(s)	205, 238
BanI	GGYRCC	1 cut(s)	1510
BbrPI	CACGTG	1 cut(s)	874
BccI	CCATC	6 cut(s)	21, 353, 598, 1398, 1892, 2125
BcgI	CGANNNNNNTGC	2 cut(s)	76, 110
BciT130I	CCWGG	4 cut(s)	226, 597, 756, 1369
BciVI	GTATCC	1 cut(s)	1210
BcoDI	GTCTC	5 cut(s)	642, 872, 1104, 1388, 1699
BcuI	ACTAGT	1 cut(s)	1708
BfaI	CTAG	3 cut(s)	1359, 1709, 2051
BfmI	CTRYAG	2 cut(s)	780, 862
BfuI	GTATCC	1 cut(s)	1210
BlpI	GCTNAGC	1 cut(s)	485
BmcAI	AGTACT	2 cut(s)	359, 1923
Bme1390I	CCNGG	4 cut(s)	226, 597, 756, 1369
Bme18I	GGWCC	3 cut(s)	599, 698, 1073
BmgT120I	GGNCC	4 cut(s)	587, 599, 698, 1073
BmiI	GGNNCC	3 cut(s)	7, 1408, 1512
BmrFI	CCNGG	4 cut(s)	226, 597, 756, 1369
BmsI	GCATC	8 cut(s)	238, 616, 731, 1099, 1218, 1608, 1671, 1873
BoxI	GACNNNNGTC	1 cut(s)	864
BpmI	CTGGAG	2 cut(s)	579, 1208
Bpu1102I	GCTNAGC	1 cut(s)	485
BpuEI	CTTGAG	2 cut(s)	826, 1723
Bsa29I	ATCGAT	1 cut(s)	624
BsaAI	YACGTR	1 cut(s)	874
BsaBI	GATNNNNATC	2 cut(s)	245, 1470
BsaHI	GRCGYC	1 cut(s)	1268
BsaJI	CCNNGG	1 cut(s)	1367
BsaWI	WCCGGW	2 cut(s)	601, 2017
BsaXI	ACNNNNNCTCC	2 cut(s)	1371, 1401
Bsc4I	CCNNNNNNNGG	6 cut(s)	29, 129, 535, 596, 1552, 1894
Bse118I	RCCGGY	1 cut(s)	1178
Bse1I	ACTGG	3 cut(s)	170, 1242, 1657
Bse21I	CCTNAGG	1 cut(s)	1761
Bse3DI	GCAATG	1 cut(s)	639
Bse8I	GATNNNNATC	2 cut(s)	245, 1470
BseAI	TCCGGA	1 cut(s)	2017
BseBI	CCWGG	4 cut(s)	226, 597, 756, 1369
BseCI	ATCGAT	1 cut(s)	624
BseDI	CCNNGG	1 cut(s)	1367
BseJI	GATNNNNATC	2 cut(s)	245, 1470
BseLI	CCNNNNNNNGG	6 cut(s)	29, 129, 535, 596, 1552, 1894
BseMI	GCAATG	1 cut(s)	639
BseMII	CTCAG	6 cut(s)	473, 653, 697, 1044, 1752, 1997
BseNI	ACTGG	3 cut(s)	170, 1242, 1657
BseRI	GAGGAG	4 cut(s)	131, 671, 1376, 2036
BsgI	GTGCAG	2 cut(s)	1460, 2050
Bsh1236I	CGCG	3 cut(s)	25, 55, 180
BshFI	GGCC	4 cut(s)	589, 1010, 1656, 2177
BshNI	GGYRCC	1 cut(s)	1510
BshVI	ATCGAT	1 cut(s)	624
BsiSI	CCGG	3 cut(s)	602, 1179, 2018
BslI	CCNNNNNNNGG	6 cut(s)	29, 129, 535, 596, 1552, 1894
BsmAI	GTCTC	5 cut(s)	642, 872, 1104, 1388, 1699
BsmBI	CGTCTC	2 cut(s)	1104, 1388
BsmI	GAATGC	2 cut(s)	1180, 1338
BsnI	GGCC	4 cut(s)	589, 1010, 1656, 2177
Bsp13I	TCCGGA	1 cut(s)	2017
Bsp1407I	TGTACA	2 cut(s)	333, 1063
Bsp143I	GATC	8 cut(s)	246, 776, 1039, 1949, 2087, 2110, 2155, 2197
Bsp1720I	GCTNAGC	1 cut(s)	485
BspACI	CCGC	6 cut(s)	23, 48, 178, 1462, 1957, 1990
BspANI	GGCC	4 cut(s)	589, 1010, 1656, 2177
BspCNI	CTCAG	6 cut(s)	472, 652, 696, 1045, 1753, 1996
BspDI	ATCGAT	1 cut(s)	624
BspEI	TCCGGA	1 cut(s)	2017
BspFNI	CGCG	3 cut(s)	25, 55, 180
BspLI	GGNNCC	3 cut(s)	7, 1408, 1512
BspMAI	CTGCAG	2 cut(s)	784, 866
BspPI	GGATC	5 cut(s)	241, 784, 2082, 2105, 2192
BspT107I	GGYRCC	1 cut(s)	1510
BsrDI	GCAATG	1 cut(s)	639
BsrFI	RCCGGY	1 cut(s)	1178
BsrGI	TGTACA	2 cut(s)	333, 1063
BsrI	ACTGG	3 cut(s)	170, 1242, 1657
BssAI	RCCGGY	1 cut(s)	1178
BssECI	CCNNGG	1 cut(s)	1367
BssMI	GATC	8 cut(s)	246, 776, 1039, 1949, 2087, 2110, 2155, 2197
BssNI	GRCGYC	1 cut(s)	1268
Bst2UI	CCWGG	4 cut(s)	226, 597, 756, 1369
Bst4CI	ACNGT	7 cut(s)	70, 1224, 1438, 1526, 1855, 1874, 2107
Bst6I	CTCTTC	2 cut(s)	292, 387
BstACI	GRCGYC	1 cut(s)	1268
BstAPI	GCANNNNNTGC	1 cut(s)	481
BstAUI	TGTACA	2 cut(s)	333, 1063
BstBAI	YACGTR	1 cut(s)	874
BstC8I	GCNNGC	4 cut(s)	193, 1180, 1336, 2184
BstDEI	CTNAG	9 cut(s)	459, 485, 639, 683, 1012, 1053, 1310, 1761, 1983
BstEII	GGTNACC	1 cut(s)	1086
BstFNI	CGCG	3 cut(s)	25, 55, 180
BstHHI	GCGC	2 cut(s)	57, 298
BstKTI	GATC	8 cut(s)	249, 779, 1042, 1952, 2090, 2113, 2158, 2200
BstMAI	GTCTC	5 cut(s)	642, 872, 1104, 1388, 1699
BstMBI	GATC	8 cut(s)	246, 776, 1039, 1949, 2087, 2110, 2155, 2197
BstMWI	GCNNNNNNNGC	8 cut(s)	39, 42, 326, 481, 1136, 1499, 1508, 2183
BstNI	CCWGG	4 cut(s)	226, 597, 756, 1369
BstNSI	RCATGY	3 cut(s)	1022, 1070, 1288
BstPAI	GACNNNNGTC	1 cut(s)	864
BstPI	GGTNACC	1 cut(s)	1086
BstSCI	CCNGG	4 cut(s)	224, 595, 754, 1367
BstSFI	CTRYAG	2 cut(s)	780, 862
BstUI	CGCG	3 cut(s)	25, 55, 180
BstX2I	RGATCY	1 cut(s)	776
BstXI	CCANNNNNNTGG	1 cut(s)	2043
BstYI	RGATCY	1 cut(s)	776
Bsu15I	ATCGAT	1 cut(s)	624
Bsu36I	CCTNAGG	1 cut(s)	1761
BsuI	GTATCC	1 cut(s)	1210
BsuRI	GGCC	4 cut(s)	589, 1010, 1656, 2177
BsuTUI	ATCGAT	1 cut(s)	624
BtgZI	GCGATG	2 cut(s)	40, 578
BtsI	GCAGTG	1 cut(s)	336
BtsIMutI	CAGTG	6 cut(s)	163, 336, 1220, 1443, 1834, 1851
Cac8I	GCNNGC	4 cut(s)	193, 1180, 1336, 2184
CaiI	CAGNNNCTG	1 cut(s)	1052
CfoI	GCGC	2 cut(s)	57, 298
Cfr10I	RCCGGY	1 cut(s)	1178
Cfr13I	GGNCC	4 cut(s)	587, 599, 698, 1073
ClaI	ATCGAT	1 cut(s)	624
CseI	GACGC	1 cut(s)	1086
Csp6I	GTAC	8 cut(s)	76, 222, 334, 358, 978, 1064, 1123, 1922
CviQI	GTAC	8 cut(s)	76, 222, 334, 358, 978, 1064, 1123, 1922
DdeI	CTNAG	9 cut(s)	459, 485, 639, 683, 1012, 1053, 1310, 1761, 1983
DpnI	GATC	8 cut(s)	248, 778, 1041, 1951, 2089, 2112, 2157, 2199
DpnII	GATC	8 cut(s)	246, 776, 1039, 1949, 2087, 2110, 2155, 2197
DraI	TTTAAA	1 cut(s)	453
EaeI	YGGCCR	1 cut(s)	2175
Eam1104I	CTCTTC	2 cut(s)	292, 387
EarI	CTCTTC	2 cut(s)	292, 387
EciI	GGCGGA	1 cut(s)	37
Eco147I	AGGCCT	1 cut(s)	1010
Eco47I	GGWCC	3 cut(s)	599, 698, 1073
Eco57I	CTGAAG	3 cut(s)	762, 939, 1810
Eco72I	CACGTG	1 cut(s)	874
Eco81I	CCTNAGG	1 cut(s)	1761
Eco91I	GGTNACC	1 cut(s)	1086
EcoO109I	RGGNCCY	1 cut(s)	698
EcoO65I	GGTNACC	1 cut(s)	1086
EcoRII	CCWGG	4 cut(s)	224, 595, 754, 1367
EcoT22I	ATGCAT	2 cut(s)	477, 1686
Esp3I	CGTCTC	2 cut(s)	1104, 1388
FauI	CCCGC	2 cut(s)	1455, 1950
FauNDI	CATATG	1 cut(s)	1999
FblI	GTMKAC	1 cut(s)	673
FspBI	CTAG	3 cut(s)	1359, 1709, 2051
GlaI	GCGC	2 cut(s)	56, 297
GsuI	CTGGAG	2 cut(s)	579, 1208
HaeIII	GGCC	4 cut(s)	589, 1010, 1656, 2177
HapII	CCGG	3 cut(s)	602, 1179, 2018
HgaI	GACGC	1 cut(s)	1086
HhaI	GCGC	2 cut(s)	57, 298
Hin1I	GRCGYC	1 cut(s)	1268
Hin6I	GCGC	2 cut(s)	55, 296
HinP1I	GCGC	2 cut(s)	55, 296
HincII	GTYRAC	1 cut(s)	570
HindII	GTYRAC	1 cut(s)	570
HindIII	AAGCTT	2 cut(s)	189, 1242
HinfI	GANTC	8 cut(s)	104, 272, 959, 1319, 1813, 2011, 2147, 2171
HpaII	CCGG	3 cut(s)	602, 1179, 2018
HphI	GGTGA	3 cut(s)	845, 1913, 1973
Hpy188I	TCNGA	6 cut(s)	124, 742, 958, 991, 1617, 2122
Hpy99I	CGWCG	1 cut(s)	104
HpyCH4III	ACNGT	7 cut(s)	70, 1224, 1438, 1526, 1855, 1874, 2107
HpyCH4IV	ACGT	3 cut(s)	873, 1268, 1381
HpyF10VI	GCNNNNNNNGC	8 cut(s)	39, 42, 326, 481, 1136, 1499, 1508, 2183
HpyF3I	CTNAG	9 cut(s)	459, 485, 639, 683, 1012, 1053, 1310, 1761, 1983
HpySE526I	ACGT	3 cut(s)	873, 1268, 1381
Hsp92I	GRCGYC	1 cut(s)	1268
HspAI	GCGC	2 cut(s)	55, 296
Kpn2I	TCCGGA	1 cut(s)	2017
KroI	GCCGGC	1 cut(s)	1178
KroNI	GCCGGC	1 cut(s)	1180
Kzo9I	GATC	8 cut(s)	246, 776, 1039, 1949, 2087, 2110, 2155, 2197
LmnI	GCTCC	4 cut(s)	5, 50, 538, 684
LweI	GCATC	8 cut(s)	238, 616, 731, 1099, 1218, 1608, 1671, 1873
MaeI	CTAG	3 cut(s)	1359, 1709, 2051
MaeII	ACGT	3 cut(s)	873, 1268, 1381
MaeIII	GTNAC	2 cut(s)	686, 1086
MalI	GATC	8 cut(s)	248, 778, 1041, 1951, 2089, 2112, 2157, 2199
MboI	GATC	8 cut(s)	246, 776, 1039, 1949, 2087, 2110, 2155, 2197
MboII	GAAGA	8 cut(s)	111, 279, 397, 404, 617, 1292, 1314, 1984
MflI	RGATCY	1 cut(s)	776
MlyI	GAGTC	3 cut(s)	113, 2020, 2180
MmeI	TCCRAC	2 cut(s)	169, 754
Mph1103I	ATGCAT	2 cut(s)	477, 1686
MroI	TCCGGA	1 cut(s)	2017
MroNI	GCCGGC	1 cut(s)	1178
MroXI	GAANNNNTTC	2 cut(s)	617, 1976
MseI	TTAA	7 cut(s)	452, 546, 1329, 1412, 1724, 1941, 2163
MslI	CAYNNNNRTG	3 cut(s)	903, 2041, 2163
MspA1I	CMGCKG	1 cut(s)	785
MspI	CCGG	3 cut(s)	602, 1179, 2018
MspR9I	CCNGG	4 cut(s)	226, 597, 756, 1369
Mva1269I	GAATGC	2 cut(s)	1180, 1338
MvaI	CCWGG	4 cut(s)	226, 597, 756, 1369
MvnI	CGCG	3 cut(s)	25, 55, 180
MwoI	GCNNNNNNNGC	8 cut(s)	39, 42, 326, 481, 1136, 1499, 1508, 2183
NaeI	GCCGGC	1 cut(s)	1180
NdeI	CATATG	1 cut(s)	1999
NdeII	GATC	8 cut(s)	246, 776, 1039, 1949, 2087, 2110, 2155, 2197
NgoMIV	GCCGGC	1 cut(s)	1178
NlaIV	GGNNCC	3 cut(s)	7, 1408, 1512
NsiI	ATGCAT	2 cut(s)	477, 1686
NspI	RCATGY	3 cut(s)	1022, 1070, 1288
PceI	AGGCCT	1 cut(s)	1010
PciI	ACATGT	2 cut(s)	1066, 1284
PctI	GAATGC	2 cut(s)	1180, 1338
PdiI	GCCGGC	1 cut(s)	1180
PdmI	GAANNNNTTC	2 cut(s)	617, 1976
PfeI	GAWTC	5 cut(s)	272, 959, 1319, 1813, 2147
PflMI	CCANNNNNTGG	1 cut(s)	1552
PfoI	TCCNGGA	1 cut(s)	595
PleI	GAGTC	3 cut(s)	112, 2019, 2179
PmaCI	CACGTG	1 cut(s)	874
PmlI	CACGTG	1 cut(s)	874
PpsI	GAGTC	3 cut(s)	112, 2019, 2179
Ppu21I	YACGTR	1 cut(s)	874
PpuMI	RGGWCCY	1 cut(s)	698
PscI	ACATGT	2 cut(s)	1066, 1284
PshAI	GACNNNNGTC	1 cut(s)	864
PshBI	ATTAAT	1 cut(s)	1941
Psp5II	RGGWCCY	1 cut(s)	698
Psp6I	CCWGG	4 cut(s)	224, 595, 754, 1367
PspCI	CACGTG	1 cut(s)	874
PspEI	GGTNACC	1 cut(s)	1086
PspGI	CCWGG	4 cut(s)	224, 595, 754, 1367
PspN4I	GGNNCC	3 cut(s)	7, 1408, 1512
PspPI	GGNCC	4 cut(s)	587, 599, 698, 1073
PspPPI	RGGWCCY	1 cut(s)	698
PstI	CTGCAG	2 cut(s)	784, 866
PstNI	CAGNNNCTG	1 cut(s)	1052
PsuI	RGATCY	1 cut(s)	776
PvuII	CAGCTG	1 cut(s)	785
RsaI	GTAC	8 cut(s)	77, 223, 335, 359, 979, 1065, 1124, 1923
RsaNI	GTAC	8 cut(s)	76, 222, 334, 358, 978, 1064, 1123, 1922
RseI	CAYNNNNRTG	3 cut(s)	903, 2041, 2163
SaqAI	TTAA	7 cut(s)	452, 546, 1329, 1412, 1724, 1941, 2163
Sau3AI	GATC	8 cut(s)	246, 776, 1039, 1949, 2087, 2110, 2155, 2197
Sau96I	GGNCC	4 cut(s)	587, 599, 698, 1073
ScaI	AGTACT	2 cut(s)	359, 1923
SchI	GAGTC	3 cut(s)	113, 2020, 2180
ScrFI	CCNGG	4 cut(s)	226, 597, 756, 1369
SfaNI	GCATC	8 cut(s)	238, 616, 731, 1099, 1218, 1608, 1671, 1873
SfcI	CTRYAG	2 cut(s)	780, 862
SinI	GGWCC	3 cut(s)	599, 698, 1073
SmiMI	CAYNNNNRTG	3 cut(s)	903, 2041, 2163
SmlI	CTYRAG	2 cut(s)	841, 1702
SmoI	CTYRAG	2 cut(s)	841, 1702
SpeI	ACTAGT	1 cut(s)	1708
SseBI	AGGCCT	1 cut(s)	1010
SsiI	CCGC	6 cut(s)	23, 48, 178, 1462, 1957, 1990
SspI	AATATT	1 cut(s)	1722
SspMI	CTAG	3 cut(s)	1359, 1709, 2051
StuI	AGGCCT	1 cut(s)	1010
StyD4I	CCNGG	4 cut(s)	224, 595, 754, 1367
TaaI	ACNGT	7 cut(s)	70, 1224, 1438, 1526, 1855, 1874, 2107
TaiI	ACGT	3 cut(s)	876, 1271, 1384
TaqI	TCGA	5 cut(s)	624, 1107, 1454, 1579, 2086
TatI	WGTACW	6 cut(s)	333, 357, 977, 1063, 1122, 1921
TfiI	GAWTC	5 cut(s)	272, 959, 1319, 1813, 2147
Tru1I	TTAA	7 cut(s)	452, 546, 1329, 1412, 1724, 1941, 2163
Tru9I	TTAA	7 cut(s)	452, 546, 1329, 1412, 1724, 1941, 2163
TscAI	CASTG	6 cut(s)	170, 336, 1227, 1443, 1834, 1858
TspGWI	ACGGA	6 cut(s)	102, 659, 1447, 1691, 1910, 2190
TspRI	CASTG	6 cut(s)	170, 336, 1227, 1443, 1834, 1858
Van91I	CCANNNNNTGG	1 cut(s)	1552
VpaK11BI	GGWCC	3 cut(s)	599, 698, 1073
VspI	ATTAAT	1 cut(s)	1941
XapI	RAATTY	4 cut(s)	464, 790, 1034, 2095
XceI	RCATGY	3 cut(s)	1022, 1070, 1288
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1895
XmiI	GTMKAC	1 cut(s)	673
XmnI	GAANNNNTTC	2 cut(s)	617, 1976
XspI	CTAG	3 cut(s)	1359, 1709, 2051
ZraI	GACGTC	1 cut(s)	1269
ZrmI	AGTACT	2 cut(s)	359, 1923
Zsp2I	ATGCAT	2 cut(s)	477, 1686

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.